Spg012002 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAACCATTTTGTGGCTAACGTGTTGAACCCTTCTGAGAGCTCTCTTTCATATTCTTTTGGATTTTCTCAATCATTATCCCATAGGGAAACTATAGATATTTTGACTCTTCTATCTTTGATAAAGGAGGTCTCCTTTAAGCCGGATAGGAGGGATATTCGTTTGTGGAGCCCTAACCTGTCTCAAGGCTTTATCTATCGATCGTTCTTCCATTGCCTCTTGGACCCTTCTTCTACTGAGGAGTCAGTCTGTTCTTTGATATGGAAGGTGAAAGTTCCAAAAAAGGTGCAGTCTTTTACCTGTCAGGTAGGGGTGAGCATCATAGACCGAAAAATCGATCCGACCGACCAAAACCGACCGAACCGACGTTGGTCGGTCGGTTTTATAGCAGTTTCGATCGGAGTCAGAAAATCCGACCAGTTGATCGGTCGGTGGGCCTAAAAAAGCCCAAACCGACCGATTCCCTTTTCTTAAATTTATATTAAAAAAAAAAAATAAAAAAAAAAAAGAGGAAAGGAAAAGCATGCACGGTTTTTGTATTTCCCACGTAAGAGAGAAGGCTAATAATTACCAATATATAAGTATAGGTAATGATTACCTAGGTAATCATTACTTTTCTTTTATAATTTATTTATTGTTTCTTAAACCTTGAACCCATGTACTTTCATCTTCTTCTTTTTTTTTTTGAAAGACTTTCATCTTCACCCTCGATTTTCTTCTTCTCTTTCACATAGCCGAAACTCAACCCACGTCGCCGCTCCTCCGTGCCGTTGAAGCTCCGTCGTGCCATTGAAGGTTGAAGTCGTGCGTTGAAGCTCCGTCGAAGCTTCGATTTCTCTCTTCTCCCCCACACAGTCGAAGTCGTGCCGTTGAAGCTCCTCTTCTTCGTCGTCCTCGCCGCTTCAACCAGTCGTCCTCGCAACTTCAGCCCGTCTTCCTCATCGCTTCTGTCGTCCATTCGCGTCAGTTTGGAGCCAAAACCAACTTCGACCGACCGATGCTCACCCCTACTGTCAGGTTCTCCATGGAAGAGCCAATACCTTTAATCGACTTTCTAGAAATATGCCTTATTTGATAGGCCCATTCTGTTGTATTCTTTGTCGGATGGCGAAGGAAGACCTCGACCATATTTTGTGGCACTATGATTTTGCTAGTTCAGTATGGAACAACTTCTTTGAGAGGCTTAAGTTTGTTAGACACAGGGATTTCAGGAAGATGATCAAGGAGTTCTTTCCCCATCTGCTTTTCGAGAACAGGGGAACTTTTTGTGGTAGTCTAGGATTTATGCTATTATTTGGGCGTTTGGGGTGA ATGAAGAACCATTTTGTGGCTAACGTGTTGAACCCTTCTGAGAGCTCTCTTTCATATTCTTTTGGATTTTCTCAATCATTATCCCATAGGGAAACTATAGATATTTTGACTCTTCTATCTTTGATAAAGGAGGTCTCCTTTAAGCCGGATAGGAGGGATATTCGTTTGTGGAGCCCTAACCTGTCTCAAGGCTTTATCTATCGATCGTTCTTCCATTGCCTCTTGGACCCTTCTTCTACTGAGGAGTCAGTCTGTTCTTTGATATGGAAGGTGAAAGTTCCAAAAAAGGTGCAGTCTTTTACCTGTCAGCCGAAACTCAACCCACGTCGCCGCTCCTCCGTGCCGTTGAAGCTCCGTCGTGCCATTGAAGTTTGGAGCCAAAACCAACTTCGACCGACCGATGCTCACCCCTACTGTCAGGTTCTCCATGGAAGAGCCAATACCTTTAATCGACTTTCTAGAAATATGCCTTATTTGATAGGCCCATTCTGTTGTATTCTTTGTCGGATGGCGAAGGAAGACCTCGACCATATTTTGTGGCACTATGATTTTGCTAGTTCAGTATGGAACAACTTCTTTGAGAGGCTTAAGTTTGTTAGACACAGGGATTTCAGGAAGATGATCAAGGAGTTCTTTCCCCATCTGCTTTTCGAGAACAGGGGAACTTTTTGTGGTAGTCTAGGATTTATGCTATTATTTGGGCGTTTGGGGTGA ATGAAGAACCATTTTGTGGCTAACGTGTTGAACCCTTCTGAGAGCTCTCTTTCATATTCTTTTGGATTTTCTCAATCATTATCCCATAGGGAAACTATAGATATTTTGACTCTTCTATCTTTGATAAAGGAGGTCTCCTTTAAGCCGGATAGGAGGGATATTCGTTTGTGGAGCCCTAACCTGTCTCAAGGCTTTATCTATCGATCGTTCTTCCATTGCCTCTTGGACCCTTCTTCTACTGAGGAGTCAGTCTGTTCTTTGATATGGAAGGTGAAAGTTCCAAAAAAGGTGCAGTCTTTTACCTGTCAGCCGAAACTCAACCCACGTCGCCGCTCCTCCGTGCCGTTGAAGCTCCGTCGTGCCATTGAAGTTTGGAGCCAAAACCAACTTCGACCGACCGATGCTCACCCCTACTGTCAGGTTCTCCATGGAAGAGCCAATACCTTTAATCGACTTTCTAGAAATATGCCTTATTTGATAGGCCCATTCTGTTGTATTCTTTGTCGGATGGCGAAGGAAGACCTCGACCATATTTTGTGGCACTATGATTTTGCTAGTTCAGTATGGAACAACTTCTTTGAGAGGCTTAAGTTTGTTAGACACAGGGATTTCAGGAAGATGATCAAGGAGTTCTTTCCCCATCTGCTTTTCGAGAACAGGGGAACTTTTTGTGGTAGTCTAGGATTTATGCTATTATTTGGGCGTTTGGGGTGA MKNHFVANVLNPSESSLSYSFGFSQSLSHRETIDILTLLSLIKEVSFKPDRRDIRLWSPNLSQGFIYRSFFHCLLDPSSTEESVCSLIWKVKVPKKVQSFTCQPKLNPRRRSSVPLKLRRAIEVWSQNQLRPTDAHPYCQVLHGRANTFNRLSRNMPYLIGPFCCILCRMAKEDLDHILWHYDFASSVWNNFFERLKFVRHRDFRKMIKEFFPHLLFENRGTFCGSLGFMLLFGRLG Homology
BLAST of Spg012002 vs. NCBI nr
Match: TYK09969.1 (calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]) HSP 1 Score: 121.3 bits (303), Expect = 1.1e-23 Identity = 72/225 (32.00%), Postives = 109/225 (48.44%), Query Frame = 0
BLAST of Spg012002 vs. NCBI nr
Match: TYK29954.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 97.4 bits (241), Expect = 1.7e-16 Identity = 60/162 (37.04%), Postives = 79/162 (48.77%), Query Frame = 0
BLAST of Spg012002 vs. NCBI nr
Match: XP_008464727.1 (PREDICTED: uncharacterized protein LOC103502543 [Cucumis melo]) HSP 1 Score: 92.0 bits (227), Expect = 7.2e-15 Identity = 54/151 (35.76%), Postives = 73/151 (48.34%), Query Frame = 0
BLAST of Spg012002 vs. NCBI nr
Match: KAA0054311.1 (golgin subfamily A member 6-like protein 22 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 91.7 bits (226), Expect = 9.4e-15 Identity = 71/236 (30.08%), Postives = 111/236 (47.03%), Query Frame = 0
BLAST of Spg012002 vs. NCBI nr
Match: XP_023554066.1 (epimerase family protein SDR39U1 homolog, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 87.8 bits (216), Expect = 1.4e-13 Identity = 63/195 (32.31%), Postives = 85/195 (43.59%), Query Frame = 0
BLAST of Spg012002 vs. ExPASy TrEMBL
Match: A0A5D3CI74 (Calpain-type cysteine protease DEK1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00980 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 5.4e-24 Identity = 72/225 (32.00%), Postives = 109/225 (48.44%), Query Frame = 0
BLAST of Spg012002 vs. ExPASy TrEMBL
Match: A0A5D3E255 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold588G00180 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 8.3e-17 Identity = 60/162 (37.04%), Postives = 79/162 (48.77%), Query Frame = 0
BLAST of Spg012002 vs. ExPASy TrEMBL
Match: A0A1S3CMM8 (uncharacterized protein LOC103502543 OS=Cucumis melo OX=3656 GN=LOC103502543 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 3.5e-15 Identity = 54/151 (35.76%), Postives = 73/151 (48.34%), Query Frame = 0
BLAST of Spg012002 vs. ExPASy TrEMBL
Match: A0A5A7UL95 (Golgin subfamily A member 6-like protein 22 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00300 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 4.5e-15 Identity = 71/236 (30.08%), Postives = 111/236 (47.03%), Query Frame = 0
BLAST of Spg012002 vs. ExPASy TrEMBL
Match: A0A5A7TIU4 (Zinc finger protein ZPR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00090 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 4.7e-12 Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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