Spg011998 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg011998
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold1: 884963 .. 885690 (-)
RNA-Seq Expression	Spg011998
Synteny	Spg011998

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCCGTCGGCGACTTTTTTTTTTCTTCATATTCTTCTTTCTTCTCCCGCCTCAGTTCAGCCCTCCCTCTCGACGCAAATCTTCCTCCCTCCGAACCGCAAGCTGGTGGTCGAAGCTTCTCATTCTCATACCACGAATCCTTCGGCGACCGCCTCTCCCTTCGATTCCGATCTAAAACGAAGGGGGAATCCCCTTTGTTTCAGACCACGACTCGGACCGACGACGAGGACGATCCCAGATCTGTTTGTGCTCGTGGGGGAGCGGTGGGGAGGGCTTCGTAGGGGACGATCCCAGCACTGAACGGTTTGTTCCATGTTGTGCTCGCGGTTTCAGTTTGACCACGAAACCTTATTGTGCTCGCAGTTGTGCTCGAGAGGGAGTCGCAGTTTCGGTCTGACCACGAAACGAATCGCTTCAGCTACTCATTCTCAGACCGCAAAACCTCTGATAACCATATTGTGCTCGTGGCTGTGCTCGAGAGGGAGGATTTCGCGTTGTGCTCGAGAGGGAGTCGCGGTTGTGGGCTTCGCAGTTGTGCTCGAGGGGGAGGGCTTCGACGAGAGGGAAATGAAGAAAGAGGGAAAGAAAAGATGAAGGAAAGGAGACGAGGGGAAAAAACCGGCGGCGACAGCGGCCGTTCGCTGGCAACGGCGGTTGGTGGCGGCCGTCGCCGGCGAGAGGTTGGTGGCGAGAGGTTGAAAAAGAAGGGTGGTGGTGATTGGTGA

mRNA sequence

ATGCTGCCGTCGGCGACTTTTTTTTTTCTTCATATTCTTCTTTCTTCTCCCGCCTCAGTTCAGCCCTCCCTCTCGACGCAAATCTTCCTCCCTCCGAACCGCAAGCTGGTGGTCGAAGCTTCTCATTCTCATACCACGAATCCTTCGGCGACCGCCTCTCCCTTCGATTCCGATCTAAAACGAAGGGGGAATCCCCTTTGTTTCAGACCACGACTCGGACCGACGACGAGGACGATCCCAGATCTGTTTGTGCTCGTGGGGGAGCGGTGGGGAGGGCTTCTTGTGCTCGAGAGGGAGTCGCAGTTTCGGTCTGACCACGAAACGAATCGCTTCAGCTACTCATTCTCAGACCGCAAAACCTCTGATAACCATATTGTGCTCGTGGCTGTGCTCGAGAGGGAGGATTTCGCGTTGTGCTCGAGAGGGAGTCGCGGTTGTGGGCTTCGCAGTTGTGCTCGAGGGGGAGGGCTTCGACGAGAGGGAAATGAAGAAAGAGGGAAAGAAAAGATGAAGGAAAGGAGACGAGGGGAAAAAACCGGCGGCGACAGCGGCCGTTCGCTGGCAACGGCGGTTGGTGGCGGCCGTCGCCGGCGAGAGGTTGGTGGCGAGAGGTTGAAAAAGAAGGGTGGTGGTGATTGGTGA

Coding sequence (CDS)

ATGCTGCCGTCGGCGACTTTTTTTTTTCTTCATATTCTTCTTTCTTCTCCCGCCTCAGTTCAGCCCTCCCTCTCGACGCAAATCTTCCTCCCTCCGAACCGCAAGCTGGTGGTCGAAGCTTCTCATTCTCATACCACGAATCCTTCGGCGACCGCCTCTCCCTTCGATTCCGATCTAAAACGAAGGGGGAATCCCCTTTGTTTCAGACCACGACTCGGACCGACGACGAGGACGATCCCAGATCTGTTTGTGCTCGTGGGGGAGCGGTGGGGAGGGCTTCTTGTGCTCGAGAGGGAGTCGCAGTTTCGGTCTGACCACGAAACGAATCGCTTCAGCTACTCATTCTCAGACCGCAAAACCTCTGATAACCATATTGTGCTCGTGGCTGTGCTCGAGAGGGAGGATTTCGCGTTGTGCTCGAGAGGGAGTCGCGGTTGTGGGCTTCGCAGTTGTGCTCGAGGGGGAGGGCTTCGACGAGAGGGAAATGAAGAAAGAGGGAAAGAAAAGATGAAGGAAAGGAGACGAGGGGAAAAAACCGGCGGCGACAGCGGCCGTTCGCTGGCAACGGCGGTTGGTGGCGGCCGTCGCCGGCGAGAGGTTGGTGGCGAGAGGTTGAAAAAGAAGGGTGGTGGTGATTGGTGA

Protein sequence

MLPSATFFFLHILLSSPASVQPSLSTQIFLPPNRKLVVEASHSHTTNPSATASPFDSDLKRRGNPLCFRPRLGPTTRTIPDLFVLVGERWGGLLVLERESQFRSDHETNRFSYSFSDRKTSDNHIVLVAVLEREDFALCSRGSRGCGLRSCARGGGLRREGNEERGKEKMKERRRGEKTGGDSGRSLATAVGGGRRRREVGGERLKKKGGGDW

Homology

The following BLAST results are available for this feature:

BLAST of Spg011998 vs.


Match Name	E-value	Identity	Description

BLAST of Spg011998 vs.


Match Name	E-value	Identity	Description

BLAST of Spg011998 vs.


Match Name	E-value	Identity	Description

BLAST of Spg011998 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg011998.1	Spg011998.1	mRNA