Spg011732 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg011732
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Glycogen phosphorylase 1-like
Location	scaffold1: 2824322 .. 2824786 (+)
RNA-Seq Expression	Spg011732
Synteny	Spg011732

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAATCGCCATGGCCTCAAAAGCTTCAAGCCCTAACCCACATTCTCCTCTGCCCCACCACCGCTCCGCCGCTCGCTTCTCAGTTCTTCATCGCCACCAAAATCCCCTGCTATCTCAATTGGGACTACCCCCCTCTCCTCTGCCCTAAACCTTCAATTTTCCCCTTTCTCTCTCTTCATCTTCAATGGGGCTTCTCTCTCTTCCTCAAAAGACTCTCCCGATTCGGCCTCCCTAAAACCTCTTGGCGATCCAAATGCCCTTTTCAACACCCTCCGCCTTTGATTCTCGCTAAAGGCGTCGACGCTGCTCAGTGGGGCGATGAACAGAGGAGAAATTACGTGAGAATGAGGCTCAGAAGAAAGCGTCTCGGCAGCGATGTTCATCCCTTAATCCCAATCATGATTCCCAATTTATTGCTGTTTTCTCTTCTGCTATGGAATCCATTGTCTTCCACTGATTGA

mRNA sequence

ATGGAAGAATCGCCATGGCCTCAAAAGCTTCAAGCCCTAACCCACATTCTCCTCTGCCCCACCACCGCTCCGCCGCTCGCTTCTCAGTTCTTCATCGCCACCAAAATCCCCTGCTATCTCAATTGGGACTACCCCCCTCTCCTCTGCCCTAAACCTTCAATTTTCCCCTTTCTCTCTCTTCATCTTCAATGGGGCTTCTCTCTCTTCCTCAAAAGACTCTCCCGATTCGGCCTCCCTAAAACCTCTTGGCGATCCAAATGCCCTTTTCAACACCCTCCGCCTTTGATTCTCGCTAAAGGCGTCGACGCTGCTCAGTGGGGCGATGAACAGAGGAGAAATTACGTGAGAATGAGGCTCAGAAGAAAGCGTCTCGGCAGCGATGTTCATCCCTTAATCCCAATCATGATTCCCAATTTATTGCTGTTTTCTCTTCTGCTATGGAATCCATTGTCTTCCACTGATTGA

Coding sequence (CDS)

ATGGAAGAATCGCCATGGCCTCAAAAGCTTCAAGCCCTAACCCACATTCTCCTCTGCCCCACCACCGCTCCGCCGCTCGCTTCTCAGTTCTTCATCGCCACCAAAATCCCCTGCTATCTCAATTGGGACTACCCCCCTCTCCTCTGCCCTAAACCTTCAATTTTCCCCTTTCTCTCTCTTCATCTTCAATGGGGCTTCTCTCTCTTCCTCAAAAGACTCTCCCGATTCGGCCTCCCTAAAACCTCTTGGCGATCCAAATGCCCTTTTCAACACCCTCCGCCTTTGATTCTCGCTAAAGGCGTCGACGCTGCTCAGTGGGGCGATGAACAGAGGAGAAATTACGTGAGAATGAGGCTCAGAAGAAAGCGTCTCGGCAGCGATGTTCATCCCTTAATCCCAATCATGATTCCCAATTTATTGCTGTTTTCTCTTCTGCTATGGAATCCATTGTCTTCCACTGATTGA

Protein sequence

MEESPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKPSIFPFLSLHLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDAAQWGDEQRRNYVRMRLRRKRLGSDVHPLIPIMIPNLLLFSLLLWNPLSSTD

Homology

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BLAST of Spg011732 vs. NCBI nr
Match: KAG6594585.1 (hypothetical protein SDJN03_11138, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026555.1 hypothetical protein SDJN02_10557, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 317.8 bits (813), Expect = 5.2e-83
Identity = 146/154 (94.81%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MEESPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEESPWPQKLQ LTHILLCPTTAPPLASQ+F+ATKIPCYLNWDYPPLLCPKPSIFPFLSL
Sbjct: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDAAQWGDEQRRNYVRMRLR 120
           HLQWGFSLFLKRLSRF LPKTSWRSKCPFQHPPPLILAKGVD AQWGDEQRR YVRMRLR
Sbjct: 61  HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120

Query: 121 RKRLGSDVHPLIPIMIPNLLLFSLLLWNPLSSTD 155
           RKRLGSDVHPLIPI+IPN+LLFSLLLWNPLSSTD
Sbjct: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 154

[Close]

BLAST of Spg011732 vs. NCBI nr
Match: XP_023517994.1 (uncharacterized protein LOC111781559 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.8 bits (808), Expect = 2.0e-82
Identity = 145/154 (94.16%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MEESPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEESPWPQKLQ LTHILLCPTTAPPLASQ+F+ATKIPCYLNWDYPPLLCPKPSIFPFLSL
Sbjct: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFLSL 60

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDAAQWGDEQRRNYVRMRLR 120
           HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPP ILAKGV+ AQWGDEQRR YVRMRLR
Sbjct: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPSILAKGVNPAQWGDEQRRTYVRMRLR 120

Query: 121 RKRLGSDVHPLIPIMIPNLLLFSLLLWNPLSSTD 155
           RKRLGSDVHPLIPI+IPN+LLFSLLLWNPLSSTD
Sbjct: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 154

[Close]

BLAST of Spg011732 vs. NCBI nr
Match: XP_022926954.1 (uncharacterized protein LOC111433914 [Cucurbita moschata])

HSP 1 Score: 315.1 bits (806), Expect = 3.4e-82
Identity = 145/154 (94.16%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MEESPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEESPWPQKLQ LTHILLCPTTAPPLASQ+F+ATKIPCYLNWDYPPLLCPKPSIFPF SL
Sbjct: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFPSL 60

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDAAQWGDEQRRNYVRMRLR 120
           HLQWGFSLFLKRLSRF LPKTSWRSKCPFQHPPPLILAKGVD AQWGDEQRR YVRMRLR
Sbjct: 61  HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120

Query: 121 RKRLGSDVHPLIPIMIPNLLLFSLLLWNPLSSTD 155
           RKRLGSDVHPLIPI+IPN+LLFSLLLWNPLSSTD
Sbjct: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 154

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BLAST of Spg011732 vs. NCBI nr
Match: XP_038883097.1 (uncharacterized protein LOC120074151 [Benincasa hispida])

HSP 1 Score: 304.3 bits (778), Expect = 6.0e-79
Identity = 141/154 (91.56%), Postives = 148/154 (96.10%), Query Frame = 0


Query: 1   MEESPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEE+PWPQKLQALTHILLCPTTAPPLASQ+ IATKIPCYLNWDYPPLLCPK SIFPFLSL
Sbjct: 11  MEETPWPQKLQALTHILLCPTTAPPLASQYLIATKIPCYLNWDYPPLLCPKSSIFPFLSL 70

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDAAQWGDEQRRNYVRMRLR 120
           HLQWGFSLFLKRLSRFGLPKTSWRSKCP+Q PPPLILAKGV +AQWGDEQR+NYVRMRLR
Sbjct: 71  HLQWGFSLFLKRLSRFGLPKTSWRSKCPYQLPPPLILAKGVHSAQWGDEQRKNYVRMRLR 130

Query: 121 RKRLGSDVHPLIPIMIPNLLLFSLLLWNPLSSTD 155
           RKRL SDVHPLIPIMIPN+LLFSLLLWNP SS+D
Sbjct: 131 RKRLVSDVHPLIPIMIPNMLLFSLLLWNPFSSSD 164

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BLAST of Spg011732 vs. NCBI nr
Match: XP_004134687.2 (uncharacterized protein LOC101221431 [Cucumis sativus])

HSP 1 Score: 303.5 bits (776), Expect = 1.0e-78
Identity = 141/154 (91.56%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MEESPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEE+PWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPK SIFPFLSL
Sbjct: 12  MEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDAAQWGDEQRRNYVRMRLR 120
           HLQWGFSLFLK+LSRFGLPKTSWRSKCP+Q PPPLILAKGV  AQW DEQR NY RMRLR
Sbjct: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131

Query: 121 RKRLGSDVHPLIPIMIPNLLLFSLLLWNPLSSTD 155
           RKRLGSDVHPLIPIMIPN+LLF+LLLWNP SSTD
Sbjct: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 165

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BLAST of Spg011732 vs. ExPASy TrEMBL
Match: A0A6J1EGM1 (uncharacterized protein LOC111433914 OS=Cucurbita moschata OX=3662 GN=LOC111433914 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.6e-82
Identity = 145/154 (94.16%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MEESPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEESPWPQKLQ LTHILLCPTTAPPLASQ+F+ATKIPCYLNWDYPPLLCPKPSIFPF SL
Sbjct: 1   MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFPSL 60

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDAAQWGDEQRRNYVRMRLR 120
           HLQWGFSLFLKRLSRF LPKTSWRSKCPFQHPPPLILAKGVD AQWGDEQRR YVRMRLR
Sbjct: 61  HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120

Query: 121 RKRLGSDVHPLIPIMIPNLLLFSLLLWNPLSSTD 155
           RKRLGSDVHPLIPI+IPN+LLFSLLLWNPLSSTD
Sbjct: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSSTD 154

[Close]

BLAST of Spg011732 vs. ExPASy TrEMBL
Match: A0A0A0KK88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518100 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 4.9e-79
Identity = 141/154 (91.56%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MEESPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEE+PWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPK SIFPFLSL
Sbjct: 12  MEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDAAQWGDEQRRNYVRMRLR 120
           HLQWGFSLFLK+LSRFGLPKTSWRSKCP+Q PPPLILAKGV  AQW DEQR NY RMRLR
Sbjct: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131

Query: 121 RKRLGSDVHPLIPIMIPNLLLFSLLLWNPLSSTD 155
           RKRLGSDVHPLIPIMIPN+LLF+LLLWNP SSTD
Sbjct: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 165

[Close]

BLAST of Spg011732 vs. ExPASy TrEMBL
Match: A0A5A7UDV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007700 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.1e-77
Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 1   MEESPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEE+PW QKLQALTHILLCP TAPPLASQFFIATKIPCYLNWDYPPLLCPK SIFPFLSL
Sbjct: 1   MEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 60

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDAAQWGDEQRRNYVRMRLR 120
           HLQWGFSLFLK+LSRFGLPKTSWRSKCP+Q PPPLILAKGV  AQW DEQR NY RMRLR
Sbjct: 61  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 120

Query: 121 RKRLGSDVHPLIPIMIPNLLLFSLLLWNPLSSTD 155
           RKRLGSDVHPLIPIMIPN+LLF+LLLWNP SSTD
Sbjct: 121 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 154

[Close]

BLAST of Spg011732 vs. ExPASy TrEMBL
Match: A0A1S3B097 (uncharacterized protein LOC103484499 OS=Cucumis melo OX=3656 GN=LOC103484499 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.1e-77
Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 1   MEESPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEE+PW QKLQALTHILLCP TAPPLASQFFIATKIPCYLNWDYPPLLCPK SIFPFLSL
Sbjct: 12  MEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 71

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDAAQWGDEQRRNYVRMRLR 120
           HLQWGFSLFLK+LSRFGLPKTSWRSKCP+Q PPPLILAKGV  AQW DEQR NY RMRLR
Sbjct: 72  HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 131

Query: 121 RKRLGSDVHPLIPIMIPNLLLFSLLLWNPLSSTD 155
           RKRLGSDVHPLIPIMIPN+LLF+LLLWNP SSTD
Sbjct: 132 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSSTD 165

[Close]

BLAST of Spg011732 vs. ExPASy TrEMBL
Match: A0A6J1IR68 (uncharacterized protein LOC111478635 OS=Cucurbita maxima OX=3661 GN=LOC111478635 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.3e-75
Identity = 135/153 (88.24%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MEESPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           ME++PW QKL+ALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLC KPSIFPF SL
Sbjct: 9   MEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 68

Query: 61  HLQWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDAAQWGDEQRRNYVRMRLR 120
           HLQWGFSLFLKRLSR GLP TSWRSKCP+Q PPPL+LA+GVD AQW DEQRRNYVRMRLR
Sbjct: 69  HLQWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRRNYVRMRLR 128

Query: 121 RKRLGSDVHPLIPIMIPNLLLFSLLLWNPLSST 154
           RKRLGSDV+PLIPIMIPN+LLF LLLW PLSST
Sbjct: 129 RKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSST 161

[Close]

BLAST of Spg011732 vs. TAIR 10
Match: AT2G33855.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 176.0 bits (445), Expect = 2.3e-44
Identity = 85/151 (56.29%), Postives = 107/151 (70.86%), Query Frame = 0


Query: 1   MEESPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKPSIFPFLSL 60
           MEE+ W Q++QA+THIL  PTT P L SQFFI   IP Y++WDYPP+  P          
Sbjct: 1   MEETTWGQRIQAVTHILTNPTTKPSLYSQFFIGAIIPNYVSWDYPPVYSP---------T 60

Query: 61  HL-QWGFSLFLKRLSRFGLPKTSWRSKCPFQHPPPLILAKGVDAAQWGDEQRRNYVRMRL 120
           HL QW  S F KR+SRFGLP TSWRS  P+  PP  ++A GV+  +WG E+RR Y R RL
Sbjct: 61  HLRQWWVSQFFKRVSRFGLPDTSWRSNSPYYQPPAAVMAVGVEEGKWGKEERREYARKRL 120

Query: 121 RRKRLGSDVHPLIPIMIPNLLLFSLLLWNPL 151
           RRKRL ++V+P IP+++PNLLLF+LLLW+PL
Sbjct: 121 RRKRLVNEVNPYIPLLVPNLLLFTLLLWDPL 142

The following BLAST results are available for this feature:

BLAST of Spg011732 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6594585.1	5.2e-83	94.81	hypothetical protein SDJN03_11138, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023517994.1	2.0e-82	94.16	uncharacterized protein LOC111781559 [Cucurbita pepo subsp. pepo]	[more]
XP_022926954.1	3.4e-82	94.16	uncharacterized protein LOC111433914 [Cucurbita moschata]	[more]
XP_038883097.1	6.0e-79	91.56	uncharacterized protein LOC120074151 [Benincasa hispida]	[more]
XP_004134687.2	1.0e-78	91.56	uncharacterized protein LOC101221431 [Cucumis sativus]	[more]

BLAST of Spg011732 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg011732 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGM1	1.6e-82	94.16	uncharacterized protein LOC111433914 OS=Cucurbita moschata OX=3662 GN=LOC1114339...	[more]
A0A0A0KK88	4.9e-79	91.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518100 PE=4 SV=1	[more]
A0A5A7UDV0	2.1e-77	90.26	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B097	2.1e-77	90.26	uncharacterized protein LOC103484499 OS=Cucumis melo OX=3656 GN=LOC103484499 PE=...	[more]
A0A6J1IR68	3.3e-75	88.24	uncharacterized protein LOC111478635 OS=Cucurbita maxima OX=3661 GN=LOC111478635...	[more]

BLAST of Spg011732 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33855.1	2.3e-44	56.29	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR38364	OSJNBA0022H21.9 PROTEIN	coord: 3..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg011732.1	Spg011732.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane