Spg011473 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg011473
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	PMD domain-containing protein
Location	scaffold8: 15634145 .. 15643303 (+)
RNA-Seq Expression	Spg011473
Synteny	Spg011473

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCGTCGAGACACCGACGCGAGTCTCAGCCCACTTACGGCAGGACCGACATCTCGACGCTGGCCTTGGCGTCTCGACGTCGGTGTTAATTATAAATACGATCTCTTCGTCTTTTTTAGCCGCTAGGTCATATTTTCAGCCGCTTTGGACGATTGTTCTCTGTTCTTTTCCATTCTTTTGAATTCAGACCTCTATTTCTATCCAGGTTTTTATTATTTTGCTATGTATTGTTGATTCTTTATTCGATTTACTTGTAGCATGAGGGGCTAAACCCCTTAGGATTGTTGGATTGGTTTAATGTATAGATGCTTTGATTTATTTTAGTTGAGTTTGCTGAAGCTTGCTTTCTGTTTTATGGTTTTGAATGATTTGCATCTTAGTTTCTCGTTTAAACCATCACGTTTGTATAACGATTTGAGTCTTGACGTCTCTTAATTCGAATATGAGCGTGGTCATATCAGTTATTTTTAGATAGCCACTAGGTTGAGGCGGATCCATCGCTAGTTTGACGGTAGCTTAGCATAGACTTCCGATAGGCCTAAGATTCTAAGAGAAGTTAGACTAATTTGATTAGAGAAATCTAAATCCTAATTTAATTAACTAATTTCGGGCCTTGTATGATCATGCAATTAACGGGTTAGCAATTTAGAGGATTTATCGGGTTATTAATTTGGTTAATTAGATTTAGGCTGAGAATTTATCGGTCTAAGTATGAGAGGCGGCGAGCGCAATTTACAATAATTAATTAATTAAGTTATTTCGTGGGGTTATCGTGTAATTTAATTAATTAAACAGAGACTGAGTAGGTGTGGTTTATCCGAAAATTCAAGAAGCACTCCAGACAATTTAATTCAATCCGTAAATTACTTTTAGAGCAAACTATGAAACTAAAATGATCAAAGTTATATATAGAGTAACCAATCTGACGGTCTCATCGTTTATCTGATTCTGTCAATTTTCACTTCGTTTCTACTACTTGCATGTTATTTAATTCATTCCGACAATTTTCCTTTTTGTTCTTGCATTTTAAATTATTTCGATCAGTGACAGACCACAAAACCCCATTTTTTACTAAAAACCCCTCTGTTTAGCGAAATCCCAAAAATAAATAAAGATCTCCCTTTCCCTGTGGACGACCCGACCACTACCTACTACAAAGTAGCTTAGAGTCGGAGTTATAAATTTATTTGGCACGGACATTGGAGAATTCGACACCCTCCTACGGTCACGCCATTAGGTCATCCAATTGAAACAATAATCTAACTAGTTAACGGTGTTACAACTAGTGGTTTACTATTTGGTGGTCCAGTCTTATATAAACTCATTGCATAGGATACCCCCGCTCGCATATCTACTACATTGACACTTTGGATCAATATGTCTGTATCAAATACAAAACGGGTCGCATCACATAGTGTTACCAGAATAAGGTACCCAACCTTATCCCTGTACTATGCACCTTTTAGGTTGTTACTTGAACATCGATCTGTAGGGATAAAAAGCCCCAGCGCAGCGGAAGCGCATTGAGAGGATCTCACACCGTATATTAATTAACATTAAAATACCAATATGAAAAGGTAAAACGCTACTTCAATCCTGCTTTAAAGTCGCTGTAAAATCATTATAAACATGCTGAAAATACAGAAAAATAAAACTACTTTATTTTTCATACTTTTCTAAAGGAAAGAGTAACCGTTACAAACCTTCGTTGTAGACTTGATCAATTCTCGCCAACGACGCTCTAACGTTGAAAAACGCAGCAACCCTTTAAGAGTCTTCGCTTGAATTTTCTTCTCCAAGAACACACAACCACAAAGGTTACACCGGTATATCTCTAAATCTAGGAGGCAATGGACTGGTGGGAGTCTTTCTCTAAGAAGAAGGCTTGAGAGAATGCAAGAGTCTTGTCTTGTGAATCTAAGAGCAAGTGGGCACCCTAACCTTTAGGTCTAGTGTTCTATTTATAGGAGAAAGGCCATGAATAAAATATTCACATAAAATCAATTATTTCCATAACTGATTTAATCTTTTCCATAATTAATCAATTCCATGACCAATCAATTCCATAATTGATTACTGTTTTCCATAAATGATTAATTACTTCCATAAGTGATTAAATCATTTCCATAAATGATTAATTACTTCCATAAGTGATTAATCATTTCCATAATTGATTAATTATGAATTAATTAATTCTTTAATTAATTAATCACCAATTTAAATATCATATATTTAATTTCCGGCCTTGAATTAATTAATTGTCCAATTTAATTTTAGTCCTTAAATTAATTAATCCATATTTGAACTCTTTCAAATTCTCTTATATCCTATAAATTTAATATGAATCAAATTCATATTAATATTTGAATTTCTTCAAATATTTATTTCTCTCATAATAATGTATCAACATACATTATATTTTTTCCCTTAGTAAATTGAACACTTTCAATTTACATTAATTACTTAGTTGCCTCAAATTACTTTACGAGCTACCAGTGGGACCTTATGGACCTGCAGATCAGAAGCTCCAACGATATGAGATTAATTGGTTAAACTCATTAACCAAATTAATCATTGTTCACACGAGATTTCGACAGGGAAATTTAATTCGTGGAAATGAACTTGATTTTATTGATTTGATGTAGAGAATGTTACAGTCTCTAATATTTATCCTCTGATGCTTTCTCTCAAAATGTAGAATCTGATCTGAGGGCTGGCGAGCTTGATCTCAGATGGAGGGAGGTCGAATCTTCAACTTGTATCTTGATGAAGAAACGGTTGATTCTTTGGAGTCTTCAAGTCGTTGGATCTTCTGAGTCTTGAGTTGGCCGAATTCTGAATCTTGGATCTTCTGAATTCTCTAGACTCTCTGACTTCTGAAGGCTCTGGACTTTGGGAGAATGCTCTGGACTCTGCCTTCTCTGACTCTGTCTGAATGCCCAAAATGAATGGTGGCCTCTTCTATTTATAGAGTTTGATGAATCTCATATGGGCTTGGGCTTGGGCCCAACCTTTGGGCTTAGGCTATATTTGGGCTTTAATCCAACCCATTTTTAATGAAGTTGGATTATTTTAATTTAGCCCAATTTCTTCAATGATCTCGGGTCACATTAGTCTCGGGTCTAATTGCCACGTGGCATAATTTGGTTGGACTCAGCTTATGTCATCTAAGGGATCAATAATAGACAAGTGGCATAGTTTGATTCGCCAAATTTTAATGTCTATTAATTTAATTTAGGGACACATGTAAATTTGTAATTGGTCCCAAATTTATTTTATCATTAATTCAAATTAATGACATGGCAATTTTTGATTGGTCGAAATTTCTCACTCAACAAATGCCCCCTTTTCAAAATTTATGCACCTATATGCGTGCATGGATTTTGAAAAGCATGATTTGTGAAAAAAAAAAATATGACGTTTAGTCATAATTTTAATTGGTGTCGATAGGTGAAACTAATCAGAATATTAACTTATAATTCAGAATATTTTTTTTTTCTACCAACATTAATTTTAGCCAAATTTAAGAATTTTTTTTTTTTTTAATATTGAACCACAATTTTAATTTCCATTTTTTTTGAAATTGGAAAATTAATTTTAGCCAAAATTGTGACAATTTTTTTTCTCTACCTTGGACATGAGTTTGGAGGTAGATAGGTACTTTGAACAAAGATTGGAGGTCTCTTGGCTTGCCAATTTTATTTGGCCACCATTTCTCCCTTGATTCATATAATTTAGAAGAGACAATTTTTTGTTTACCTTAATGGCAATTGTAGGAAATTCCTTGCCATATTTGATTAGGCCAAAATTTCCTTGGCCAAAAATCAACTTTTCCTTATGTGTTTGACCTAATTTCTCCTTTATAAATTGGAGAAGTTGCATAGGCCAAGACACAAAGCCACTAAAGCAAGAAGTCTAGCTAAGAAAAATTCTCTCCTCTTTAATTTCTCTTTTCTTTCTTTCAGTTGACTTCAAATGCTCATGTATTTTCTTCTTTGTGTAGGCCTTGAGTTTGAGCGAAAATCTCCCTTCGTGCCTCTTCGTGGTGTCGGTAAGTCAAAGAACAATCTTGATTTTTTTTTTCTTCATGAGTGCCGTAGGTTCCTAAAAAAAATCAATCCTCCTTTTTATATATAACATATATAACTGCATATAAAGGGGGCTTCATGTAGCAATCTTTTTTTTTTTCATCACCAGGCTGTTTTCACACACACACATGAAATATATTATATGACATGATAGTCACTGCTGTGAGTTTCCACTATATATTTTTTTGTTCATTTTTTTTTTGATTTTATATATAGACATAAATGCGCATACAAAGCACCTACTCAAATATATATTTTATTTCTTTCTTTTCTGTATGTACTGTCGTACATTCAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTGTCGTCGCACTGTTGCATACATATATATATGCATTAGGTTTGAGTCTAAGCTGCAAGATTTGTCCCTTTTTTTTTCTCAATTTTTTGCCGCCGCACTATTGCAGTCGCATGAGGTGTTTTATTTTTTTTATATTTTTTTTCCTGGCCACAAAACCGACCCTTCTATTTTTTTTCGTCAATCTTCAACTTTCTTCAATTTCTTTTTAAAATTGCCGCCGCTCCAATTTTTTTTCTTTGTCTCTAACACCGCCACACCTTTCTCTTTTTTTTTTTTTTTTTTTAATTCTAGACTGCAACATTTTTTTTTCTCTTTCCTTTTGAGTTGCATATTTCCTCTTTTTTTTTTTTTTTAAACTCACTTTGCCGCCAGAATACTTGTAGCCTTTTTTTTTATTCCACCGCACGCCTTTTTTGTTTTTTGTTTTTTGCACACATATGTATGTGAGGCGTCTTTTTTCTATTCCTGGCTATGCCTTTTTTTTTTTGTAAAACACCTTTTTTTGTTTTTTTTTTGCTAATTATATTCCTTTCTTTCATAGGAATTGAAATTAACAAATTTACTTGACGATCTCCTTAGACACAACATCAATCTTTGTCCACCATCTACAAGGTATATACGTATTTTTTTTTGAATAAGCATACATTCCATTGGTGTCCTATTGAATATCGCACATACGAAATTCTTTGATTGTGCCATAGGTATATACATATTCAAACTCCTTTTTTTTCGAATATTATTGCAATTTGTTTCTTTTTTTGCTTGAATGTGTAAACATCGTGCAACAGTCGTCACCAAATTTACTTGCAGTGATTTCACCACCTGTCTAGACTAGTCACTTTGATGACTGTAGTATCCTGCAGGGGTGGTCACCAGATTCGCCTACAGTGATGCACTCCTGCTAGATCTGTCCCTATTTTATTAAGTGATATGAGTAGCCTGCAGGGGTAGTCACCAGATTTGCCTACAATGGTCGTCATCAAATTCACTTACAGTGATTTCACCACCTGTCTAGACTAGTCACTTTAATGACTGTAGTTTCCTGTAGGGGTGGTAACCAGACTTGTCTACAACGGTCGTCATCAAATTCACTTGCAGTGATTTCACCACCTGCTAGACCAATCACTTTGATGACTGTAGTTTCCTGTAGGGGTGGTCACCAGACTTGTCTACAACGGTCGTCATCAACTTCACTTGCAGTGATTTCACCACCTGTCTAGACCAGTCACTTTGATGACTGTAGTTTCTTGCATGGGTGGTCACCAGATTTGCCTACAATGGTCGTCATCAAATTCACTTGCAGTGATTTCACCACCTGTCTAGACCAGTCACTTTGATGACTTTAGTTTCCTGTAGGGGTGGTCACCAGACTTGTCTACAACGGTCGTCATGAACTTCATTTGCAGTGATTTCACCACCTGTCTAGACCAGTCACTTTGATGACTGTAGTTTCCTGCAAGGGTGGTCACCAGACTTGTCTACAACGGTCGTCATCAAATTCATTTGCAGTGATTTCACCACCTGTCTAGACCAGTCACTTTAGTGACTGTAGTTTCCTGCAGGGGTGGTCACTAGACTTGTCTACAACGATCGTCATCAACTTCATTTGCAGTGATTTCACCACCTGTCTAGACCAGTCATTTTGATGACTGTAGTTTTCTGTAGGGGTGGTCACCAGACTTACCTACAACAATTTCACTCCTGTCAAGACCAGTCACTTTGATGACTGCAATGTCTTACAGGGTTGATTACCCTTTTTTTTCGTGATTGATTATTTATGCATCATTTTCTTGCCTTCATAACTTCTTGGATAAGATTGATATAAATTTCTTTTTTGTGTAGAAAAAATTATCTCCATCATGGTGTATTTCACTGAGCATCCTGATCCTGAGAAAAACTGCTAAGTCATCTTGAAGGATAGAGATCAACCTGTTGAACATGGAGTCATTCTTCACGTAGGTGAGGCGGTGCATGGAAACTTTAGGACATTGCAGCCTTCCTTAGATGGTTCTAGAGTCCTATCTAGATGGTTTGAAGGGAGGTCCTTAAATCAAGAATCATCCATGAAAGTGTGGTTTCTAGAATCTTCAATATATAATAAAGCGTCGAGTCAGAATCCAGAATCAACACTAGGTCGTCAAATTATTGAGGGTAAAGGTCACTGGAGTTCGTCATTTAAAATCCATGGAGAATTCGGTTACACTCGCCTTTATTGGGAATGGTTGGAAATTGTAGTTGCTCGCAATGAGCCGACACTTAAGAAAGCTCGTCTGTTTGATATTGTGATGGCTTCCTTATACACCTATGACCGTAATACCGATATAATTCGAGCATTTTGTGAGGCGTGGTGTCCATCAACAAATACTCTTCATACGTCATCTGGAGAATTGTCTATCTCCTTATGGGACATGTGGAGATTAGGGGGCCTTTCCATTAAGGGGAAGTTCTACGATGAAGTTATTCCTTGCTGCAAGGAATTATTAGCGTCATCTGATCAAAACAATGAAGGCCTCCCGAAAAGTTGTGAGTATCTTTTTGCTGCTTATTATCATATAGCCTCTCAGAACCGTGATCATTTTCAGATTTCCATTACTTCATGGATTTCTTTTTGGTTTAAGAGAGATTTGAAGTATGAGAAGCCTCCTCGAAAAGTAAAGAAAGCTAGTCGTCCTAGCTCGACTAACACACATAATCCAAATGGAGTTCCTATCAAGTGTTCTGACTAGTCTGAGAGAGAACTCGAGTTCTTCCGTGAGTTGGGTGTAGAAGATGAATGGATAGAAAAGACTTACTTGGCTGCTTTTCTTTCTTGTTGGTTATGTGTATTTGTGTTTCCCAACAAGCAGATTTCTCTTCGTCTAGAGGTCTTCAAAGTTACAAGCCTTATGGCAGAAGGTTATGCTTTTAGTCTTGCTATTCCAGTTTTGGCTAATATCTATCATGGGTTGGGCCAGATTTATAAAGCGTCTCCTTCGGTAGGACGTTCAAAGGCTTGTTTTCCAGTACATTATGTTACCGCTTGACTTGCTTATTACTTTAACACGCATTATGCAGTTCTAGAAAAAGTTAGGGGCCCAATGATGGTTGAGTTTTCCGGAGAGGGTGGAGTTAAATACTTTGACGATTTTGAGGCTCGTGCACATATTCATAAAGGTAAATATGTATCGTGGTATGTGAATCTCCCTCCTCGCAATAAAGGCATGGTTTTGACAGATGATGACAAACTATCATTTTGGCATTCCTCATTCTTTATAAGCATTCAATCATGCTTCTTATCTTCACGATGTGGGTCTCCGATGGTCATTGAAGCTTATAGTCCTTGTCGATTTAGCCAACAATCTGGATTTTACCAAGACGTGCCAAACGATCTAAGTGATGAAGTTCCTGCAACCAACTTAGATAATGTATTGCGCCTTTGGATGATATGTGTTCAAGCAAAAACATTGTCTCAAGTTTATCTCCCTGCACAAGTAATGAAGTGACACATCCAAATTACCCAATGCTATCGGAGTTGGTGGTTGGCAAAAAATGGAAATTATCTTGAAGAAGGGGTAGAAAAATTGGTGGCTAGTGCTATTCCTCTTCCTCCCAAGCTAAAATTTCCCAAAAAGGTTGGTGATGACAACGGAGGCAAAATGATTCGCATGTTTGAGCCTGGTGAATTTCGTTCTAGGGATAATGATGGTAGTCAGAGCAGTAGCGGCAATCATCATTGGAAAAGGCCTAAAAAGTCCAATCAACTATCAGTATGTGAAGATGAACTTTTTGATGGAGTTCCCAGCGCATCACAATTTCCTGAATTCCCTGCACTACTGGTAAGTGTTTTCATTCCTTCTTCATTATAATATTTTACTATTATTATTATCATTATTACTTACTTTTTTTTTTGCAGTCACCTTTAAATGATCCCCTTATAGAAGCCAAGGGGCATCACAGTCCTCCTTCTTTTGTGAGTCCAGACGTTTTTGATTCTGTAGCTACGCGCGTGGGCAATTTCAAAGCGCCAATGGATAGAGTTGTGACTCAATCTTGTCATCCTGTAACTGATGAAATTCCCGGACAAATGAAGACAACAACCCATGCAGTTGTGTTTGAGATTTCTGATCATTGTGCTGACAATGTGATTTTCAACTATAGGAAACAAGCTGCCCTTGCCCTATGGGAGAGCATACATCAGAAGATCATACGCACTCCCTTCGACAGAATACCTCGTCTTGAACAAGAGACAGTCAAAATATTTCATGCAATTTCTGAGACTCGTGCACCCGGCTTGGATCCTCTTAAAGAAATTGTAAGTGCGTATTTCAAGAATGTAGAAAAGTATAACCAGTTGTAGTCGTCATTTTCTTCTCAATTAACTTCGGAGAGTAAGACTCGCCAATTGGAAGAGACTAAGTTTAGCTTGGAGAAGATACTATAGAGTGAAAGTGAACTACTCACAGCGAAGGGTATACTTCAGCAACAACATTGCAAGCATTGCGAGAAGAAGAAGAATTGGAAGCTAAGCTTGAAGCTATGAAAGCTAGGCGAGGTGAGATTTCTAAGTTGATTGTCGAGAAGAAGGACCTTTTAAAACAACATCAACTCGAGGCTTCCAAACTGCGAGGAACTATAAGTAGTATCGAAGTTGCCCCTGTTCTTACTGATGCTGATGTTAAAACGCTGACGATACTTTGTGGAATGTTGGAAGATGCACAAGAAGAGCTGAAGAACTACAAGTGGATACCGTGA

mRNA sequence

ATGGCGGCGTCGAGACACCGACGCGAGTCTCAGCCCACTTACGGCAGGACCGACATCTCGACGCTGGCCTTGGCGTCTCGACACCTCTATTTCTATCCAGGCCTTGAGTTTGAGCGAAAATCTCCCTTCGTGCCTCTTCGTGGTGTCGGGGTGGTCACCAGACTTACCTACAACAATTTCACTCCTGTCAAGACCAGTCACTTTGATGACTGCAATGTCTTACAGGTCATCTTGAAGGATAGAGATCAACCTGTTGAACATGGAGTCATTCTTCACGTAGGTGAGGCGGTGCATGGAAACTTTAGGACATTGCAGCCTTCCTTAGATGGTTCTAGAGTCCTATCTAGATGGTTTGAAGGGAGGTCCTTAAATCAAGAATCATCCATGAAAGTGTGGTTTCTAGAATCTTCAATATATAATAAAGCGTCGAGTCAGAATCCAGAATCAACACTAGGTCGTCAAATTATTGAGGTTCTAGAAAAAGTTAGGGGCCCAATGATGGTTGAGTTTTCCGGAGAGGGTGGAGTTAAATACTTTGACGATTTTGAGGCTCGTGCACATATTCATAAAGGTAAATATGTATCGTGGTATGTGAATCTCCCTCCTCGCAATAAAGGCATGGTTTTGACAGATGATGACAAACTATCATTTTGGCATTCCTCATTCTTTATAAGCATTCAATCATGCTTCTTATCTTCACGATGTGGGTCTCCGATGGTCATTGAAGCTTATAGTCCTTGTCGATTTAGCCAACAATCTGGATTTTACCAAGACGTGCCAAACGATCTAAGTGATGAAGTTCCTGCAACCAACTTAGATAATGTATTGCGCCTTTGGATGATATGTGTTCAAGCAAAAACATTGTCTCAAGTTTATCTCCCTGCACAACTAAAATTTCCCAAAAAGGTTGGTGATGACAACGGAGGCAAAATGATTCGCATGTTTGAGCCTGGTGAATTTCGTTCTAGGGATAATGATGGTAGTCAGAGCAGTAGCGGCAATCATCATTGGAAAAGGCCTAAAAAGTCCAATCAACTATCAGTATGTGAAGATGAACTTTTTGATGGAGTTCCCAGCGCATCACAATTTCCTGAATTCCCTGCACTACTGTCACCTTTAAATGATCCCCTTATAGAAGCCAAGGGGCATCACAGTCCTCCTTCTTTTGTGAGTCCAGACGTTTTTGATTCTGTAGCTACGCGCGTGGGCAATTTCAAAGCGCCAATGGATAGAGTTGTGACTCAATCTTGTCATCCTGTAACTGATGAAATTCCCGGACAAATGAAGACAACAACCCATGCAGTTGTGTTTGAGATTTCTGATCATTGTGCTGACAATGTGATTTTCAACTATAGGAAACAAGCTGCCCTTGCCCTATGGGAGAGCATACATCAGAAGATCATACGCACTCCCTTCGACAGAATACCTCGTCTTGAACAAGAGACAGTCAAAATATTTCATGCAATTTCTGAGACTCGTGCACCCGGCTTGGATCCTCTTAAAGAAATTGTAAGTGCGTATTTCAAGAATGTAGAAAAGTATAACCACGAAGGGTATACTTCAGCAACAACATTGCAAGCATTGCGAGAAGAAGAAGAATTGGAAGCTAAGCTTGAAGCTATGAAAGCTAGGCGAGGTGAGATTTCTAAGTTGATTGTCGAGAAGAAGGACCTTTTAAAACAACATCAACTCGAGGCTTCCAAACTGCGAGGAACTATAAGTAGTATCGAAGTTGCCCCTGTTCTTACTGATGCTGATGTTAAAACGCTGACGATACTTTGTGGAATGTTGGAAGATGCACAAGAAGAGCTGAAGAACTACAAGTGGATACCGTGA

Coding sequence (CDS)

ATGGCGGCGTCGAGACACCGACGCGAGTCTCAGCCCACTTACGGCAGGACCGACATCTCGACGCTGGCCTTGGCGTCTCGACACCTCTATTTCTATCCAGGCCTTGAGTTTGAGCGAAAATCTCCCTTCGTGCCTCTTCGTGGTGTCGGGGTGGTCACCAGACTTACCTACAACAATTTCACTCCTGTCAAGACCAGTCACTTTGATGACTGCAATGTCTTACAGGTCATCTTGAAGGATAGAGATCAACCTGTTGAACATGGAGTCATTCTTCACGTAGGTGAGGCGGTGCATGGAAACTTTAGGACATTGCAGCCTTCCTTAGATGGTTCTAGAGTCCTATCTAGATGGTTTGAAGGGAGGTCCTTAAATCAAGAATCATCCATGAAAGTGTGGTTTCTAGAATCTTCAATATATAATAAAGCGTCGAGTCAGAATCCAGAATCAACACTAGGTCGTCAAATTATTGAGGTTCTAGAAAAAGTTAGGGGCCCAATGATGGTTGAGTTTTCCGGAGAGGGTGGAGTTAAATACTTTGACGATTTTGAGGCTCGTGCACATATTCATAAAGGTAAATATGTATCGTGGTATGTGAATCTCCCTCCTCGCAATAAAGGCATGGTTTTGACAGATGATGACAAACTATCATTTTGGCATTCCTCATTCTTTATAAGCATTCAATCATGCTTCTTATCTTCACGATGTGGGTCTCCGATGGTCATTGAAGCTTATAGTCCTTGTCGATTTAGCCAACAATCTGGATTTTACCAAGACGTGCCAAACGATCTAAGTGATGAAGTTCCTGCAACCAACTTAGATAATGTATTGCGCCTTTGGATGATATGTGTTCAAGCAAAAACATTGTCTCAAGTTTATCTCCCTGCACAACTAAAATTTCCCAAAAAGGTTGGTGATGACAACGGAGGCAAAATGATTCGCATGTTTGAGCCTGGTGAATTTCGTTCTAGGGATAATGATGGTAGTCAGAGCAGTAGCGGCAATCATCATTGGAAAAGGCCTAAAAAGTCCAATCAACTATCAGTATGTGAAGATGAACTTTTTGATGGAGTTCCCAGCGCATCACAATTTCCTGAATTCCCTGCACTACTGTCACCTTTAAATGATCCCCTTATAGAAGCCAAGGGGCATCACAGTCCTCCTTCTTTTGTGAGTCCAGACGTTTTTGATTCTGTAGCTACGCGCGTGGGCAATTTCAAAGCGCCAATGGATAGAGTTGTGACTCAATCTTGTCATCCTGTAACTGATGAAATTCCCGGACAAATGAAGACAACAACCCATGCAGTTGTGTTTGAGATTTCTGATCATTGTGCTGACAATGTGATTTTCAACTATAGGAAACAAGCTGCCCTTGCCCTATGGGAGAGCATACATCAGAAGATCATACGCACTCCCTTCGACAGAATACCTCGTCTTGAACAAGAGACAGTCAAAATATTTCATGCAATTTCTGAGACTCGTGCACCCGGCTTGGATCCTCTTAAAGAAATTGTAAGTGCGTATTTCAAGAATGTAGAAAAGTATAACCACGAAGGGTATACTTCAGCAACAACATTGCAAGCATTGCGAGAAGAAGAAGAATTGGAAGCTAAGCTTGAAGCTATGAAAGCTAGGCGAGGTGAGATTTCTAAGTTGATTGTCGAGAAGAAGGACCTTTTAAAACAACATCAACTCGAGGCTTCCAAACTGCGAGGAACTATAAGTAGTATCGAAGTTGCCCCTGTTCTTACTGATGCTGATGTTAAAACGCTGACGATACTTTGTGGAATGTTGGAAGATGCACAAGAAGAGCTGAAGAACTACAAGTGGATACCGTGA

Protein sequence

MAASRHRRESQPTYGRTDISTLALASRHLYFYPGLEFERKSPFVPLRGVGVVTRLTYNNFTPVKTSHFDDCNVLQVILKDRDQPVEHGVILHVGEAVHGNFRTLQPSLDGSRVLSRWFEGRSLNQESSMKVWFLESSIYNKASSQNPESTLGRQIIEVLEKVRGPMMVEFSGEGGVKYFDDFEARAHIHKGKYVSWYVNLPPRNKGMVLTDDDKLSFWHSSFFISIQSCFLSSRCGSPMVIEAYSPCRFSQQSGFYQDVPNDLSDEVPATNLDNVLRLWMICVQAKTLSQVYLPAQLKFPKKVGDDNGGKMIRMFEPGEFRSRDNDGSQSSSGNHHWKRPKKSNQLSVCEDELFDGVPSASQFPEFPALLSPLNDPLIEAKGHHSPPSFVSPDVFDSVATRVGNFKAPMDRVVTQSCHPVTDEIPGQMKTTTHAVVFEISDHCADNVIFNYRKQAALALWESIHQKIIRTPFDRIPRLEQETVKIFHAISETRAPGLDPLKEIVSAYFKNVEKYNHEGYTSATTLQALREEEELEAKLEAMKARRGEISKLIVEKKDLLKQHQLEASKLRGTISSIEVAPVLTDADVKTLTILCGMLEDAQEELKNYKWIP

Homology

[Close]

BLAST of Spg011473 vs. NCBI nr
Match: XP_031745312.1 (uncharacterized protein LOC116405439 [Cucumis sativus])

HSP 1 Score: 323.9 bits (829), Expect = 2.9e-84
Identity = 216/601 (35.94%), Postives = 295/601 (49.08%), Query Frame = 0


Query: 162  VRGPMMVEFSGEGGVKYFDDFEARAHIHKGKYVSWYVNLPPRNKGMVLTDDDKLSFWHSS 221
            +RGP MVEFSGEGG KY+ + EAR HIHKGKYVSW+  LP +NK  +LTDD +L  W++S
Sbjct: 400  LRGPRMVEFSGEGGAKYYTNLEARTHIHKGKYVSWHACLPTKNKDELLTDDGELISWNAS 459

Query: 222  FFISIQSCFLSSRCGSPMVIEAYSPCRFSQQSGFYQDVPNDLSDEVPATNLDNVLRLWMI 281
            FFISI+SCFLSS+CGS  VIE YSPCRFS+Q GFYQDVP DL +E+P  N  NV   WMI
Sbjct: 460  FFISIRSCFLSSQCGSSTVIEPYSPCRFSRQFGFYQDVPYDLGEEIPEANFFNVRYCWMI 519

Query: 282  CVQAKTLSQVYLPAQLKFP----------------------------------------- 341
            C++  TLSQVYLP     P                                         
Sbjct: 520  CIRENTLSQVYLPVSAPNPDTHVTSHYKVWWLAKHGDYLQEGVQHLIDRPTPPHIKSKTT 579

Query: 342  KKV------------GDDNGGKMIRMFEPGEFRSRDN----------------------- 401
            KK+             D+   +++   E G  R  DN                       
Sbjct: 580  KKIEHNFGSGNQKICSDETDERLVEKIEGGTKRLVDNLSLSTRFKHLIKGGIDNVGKDNR 639

Query: 402  ------------DGSQSSSGNHHWKRPKKSNQLSVCEDELFDGVPSASQFPEFPA----- 461
                        + SQSS+ + HWKRPKK N+ S+ ++E    VP A+QF + P+     
Sbjct: 640  LSIATKHPSKRIEDSQSSNDDRHWKRPKKPNKQSIDDEESPIRVPDAAQFFDVPSPMVSF 699

Query: 462  ----------LLSPL-------NDPLIEAKGHH------SPPSFVSPDVFDSVATRVGNF 521
                      + SPL       N  L  + G H      +  S  + +  + V +  GN 
Sbjct: 700  RLPFYLFIYCIFSPLLLLFLVVNIILQSSLGDHDLHIEDTLESMPNLEDCNVVLSYNGNS 759

Query: 522  KAPMDRVVTQSCHPVTDEIPGQMKTTTHAVVFEISDHCADNVIFNYRKQAALALWESIHQ 581
            K P+   +  +C PV    P +++ T    V EIS  CAD++I + R+QAA+ LWE++ Q
Sbjct: 760  KEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQ 819

Query: 582  KIIRTPFDRIPRLEQETVKIFHAISETRAPGLDPLKEIVSAYFKNVEKYN--HEGYTSAT 612
            KIIRTPF+R+  LE E  KIF AI+ + +  L  L+E+V+ YF+ VE +N  H  +   +
Sbjct: 820  KIIRTPFERLSSLEPEMHKIFDAIATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQS 879

[Close]

BLAST of Spg011473 vs. NCBI nr
Match: XP_031745312.1 (uncharacterized protein LOC116405439 [Cucumis sativus])

HSP 1 Score: 82.0 bits (201), Expect = 1.9e-11
Identity = 46/109 (42.20%), Postives = 64/109 (58.72%), Query Frame = 0


Query: 65  TSHFDDCNVLQVILKDRDQPVEHGVILHVGEAVHGNFRTLQPSLDGSRVLSRWFEGRSLN 124
           T + D      +ILKD DQ +E G+IL V E  + N    Q   D    L +W + R +N
Sbjct: 5   TEYSDSTKRCLIILKDVDQSLEEGIILPVREGTYENIMDSQIPEDNFIFLPKWSKERFVN 64

Query: 125 QESSMKVWFLESSIYNKASSQNPESTLGRQIIEVLEKVRGPMMVEFSGE 174
             SS+K WFLESSI+NK  +++PESTLGR+II    K+R   +++  GE
Sbjct: 65  PNSSLKSWFLESSIHNKPPNEDPESTLGRRIIND-PKIRWGNVLKVHGE 112

HSP 2 Score: 275.8 bits (704), Expect = 9.1e-70
Identity = 188/538 (34.94%), Postives = 260/538 (48.33%), Query Frame = 0


Query: 167 MVEFSGEGGVKYFDDFEARAHIHKGKYVSWYVNLPPRNKGMVLTDDDKLSFWHSSFFISI 226
           MVEFSGEGG KY+ + EAR HIHKGKYVSW+  LP +NK  +LTDD +L  W++SFFISI
Sbjct: 1   MVEFSGEGGAKYYTNLEARTHIHKGKYVSWHACLPTKNKDELLTDDGELISWNASFFISI 60

Query: 227 QSCFLSSRCGSPMVIEAYSPCRFSQQSGFYQDVPNDLSDEVPATNLDNVLRLWMICVQAK 286
           +SCFLSS+CGS  VIE YSPCRFS+Q GFYQDVP DL +E+P  N  NV   WMIC++  
Sbjct: 61  RSCFLSSQCGSSTVIEPYSPCRFSRQFGFYQDVPYDLGEEIPEANFFNVRYCWMICIREN 120

Query: 287 TLSQVYLPAQLKFP-----------------------------------------KKV-- 346
           TLSQVYLP     P                                         KK+  
Sbjct: 121 TLSQVYLPVSAPNPDTHVTSHYKVWWLAKHGDYLQEGVQHLIDRPTPPHIKSKTTKKIEH 180

Query: 347 ----------GDDNGGKMIRMFEPGEFRSRDN---------------------------- 406
                      D+   +++   E G  R  DN                            
Sbjct: 181 NFGSGNQKICSDETDERLVEKIEGGTKRLVDNLSLSTRFKHLIKGGIDNVGKDNRLSIAT 240

Query: 407 -------DGSQSSSGNHHWKRPKKSNQLSVCEDELFDGVPSASQFPEFPALLSPLNDPLI 466
                  + SQSS+ + HWKRPKK N+ S+ ++E     P  S   +    +    +  +
Sbjct: 241 KHPSKRIEDSQSSNDDRHWKRPKKPNKQSIDDEE----SPIRSSLGDHDLHI----EDTL 300

Query: 467 EAKGHHSPPSFVSPDVFDS--VATRVGNFKAPMDRVVTQSCHPVTDEIPGQMKTTTHAVV 526
           E+  +    + V P++ D   V +  GN K P+   +  +C PV    P +++ T    V
Sbjct: 301 ESMPNLEDCNIVLPNLEDCNIVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITV 360

Query: 527 FEISDHCADNVIFNYRKQAALALWESIHQKIIRTPFDRIPRLEQETVKIFHAISETRAPG 580
            EIS  CAD++I + R+QAA+ LWE++ QKIIRTPF+R+  LE E  KIF AI+   +  
Sbjct: 361 SEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPEMHKIFDAIATCGSDN 420

[Close]

BLAST of Spg011473 vs. NCBI nr
Match: KAA0050516.1 (hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa])

HSP 1 Score: 253.4 bits (646), Expect = 4.8e-63
Identity = 170/510 (33.33%), Postives = 249/510 (48.82%), Query Frame = 0


Query: 161 KVRGPMMVEFSGEGGVKYFDDFEARAHIHKGKYVSWYVNLPPRNKGMVLTDDDKLSFWHS 220
           +VRGP M  FSG GG  YF ++EAR  IH G  + W+ NL  R+K   + D    SF   
Sbjct: 407 EVRGPKMTNFSGGGGSIYFGEYEARELIHNGARIQWHANLQNRSKHERMVDTHDSSFLQM 466

Query: 221 SFFISIQSCFLSSRCGSPMVIEAYSPCRFSQQSGFYQDVPNDLSDEVPATNLDNVLRLWM 280
           S+F+S++SC+LSSRC +  +I +YS  RF +Q GFYQD+PND+    PA  LDN+L    
Sbjct: 467 SYFVSMRSCYLSSRCENTWIITSYSSYRFGRQFGFYQDLPNDIGGMPPAITLDNILYHLR 526

Query: 281 ICVQAKTLSQVYLPA-----------------------------------------QLKF 340
           IC +  TLS++YLPA                                         Q + 
Sbjct: 527 ICTRCNTLSELYLPARSLEPCKHVTQQFTDWWTTKHGTYFEDNRHHLVTSVIPSPSQPRL 586

Query: 341 PKKVGDDNGGKMIRMFEP-----GEFRSRDNDGSQSSSGNHHWKRPKKSNQLSVCEDELF 400
           PK  G + GGK IR+ E       E      D S +S  + HWKRP K  ++S   D   
Sbjct: 587 PKNRGSNLGGKEIRLVEAMAPNLEEEVKEHKDESNNSKSDRHWKRPLKKAKVS--GDHPN 646

Query: 401 DGVPSASQFPEFPALLSPLNDPLIEAKGHHSPPSFVSPDVFDSVATRVGNFKAPMDRVVT 460
               SA + P+ P  LSPLND L       S  S   P   DS    VG  K  +++   
Sbjct: 647 GRGLSALEVPDVPP-LSPLNDHLEGLIEPDSDKSLTGPHAVDSAFEEVGTSKTLVNKPAE 706

Query: 461 QSCHP--VTDEI-PGQM------------KTTTHAVVFEISDHCADNVIFNYRKQAALAL 520
           QS HP  + +EI  G+M            K T  +   E S    + V+ N+ ++ AL +
Sbjct: 707 QSLHPSALLEEIRRGKMTVGEKTLRALHPKKTARSP--EPSQWVGEKVVSNFFQKTALCM 766

Query: 521 WESIHQKIIRTPFDRIPRLEQETVKIFHAISETRAPGLDPLKEIVSAYFKNVEKYNHEGY 580
           WE I  KI+RTPF+ IPRL  E   +F  I +  A GL  L+E +++Y K V+ +N    
Sbjct: 767 WEDIQDKIMRTPFEYIPRLRPEIATVFSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQS 826

Query: 581 TSATTLQALREEEELEAKLEAMKARRGEISKLIVEKKDLLKQHQLEASKLRGTISSIEVA 610
           + +  L +  +  +L  K  A+      + +L  + K  + Q +LE +KL+  ++++E  
Sbjct: 827 SYSAQLLSTDKAHQLNEKTSAINEALTLVKQLRGDVK-AIDQQELEVAKLQDEVNTLEST 886

[Close]

BLAST of Spg011473 vs. NCBI nr
Match: KAA0025356.1 (hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 233.4 bits (594), Expect = 5.2e-57
Identity = 165/538 (30.67%), Postives = 247/538 (45.91%), Query Frame = 0


Query: 161 KVRGPMMVEFSGEGGVKYFDDFEARAHIHKGKYVSWYVNLPPRNKGMVLTDDDKLSFWHS 220
           +VRGP M  FSGEGG  YF ++EAR  IH G  + W+ NL  R+K   + D    SF   
Sbjct: 379 EVRGPKMTNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRSKHERMVDTHDSSFLQM 438

Query: 221 SFFISIQSCFLSSRCGSPMVIEAYSPCRFSQQSGFYQDVPNDLSDEVPATNLDNVLRLWM 280
           S+ +S+ SC+LSSRC +  +I +YSP +F +Q GFYQD+PND+    PA  LDN+L  W 
Sbjct: 439 SYSVSMCSCYLSSRCENTWIITSYSPYKFERQFGFYQDLPNDIGGMPPAITLDNILYHWR 498

Query: 281 ICVQAKTLSQVYLPA-----------------------------------------QLKF 340
           IC +  TLS++YLPA                                         Q + 
Sbjct: 499 ICTRRNTLSELYLPARSLEPCKHVTQRFTDWWTTKHGTYFEDNRHHLVSSAIPPPSQSRL 558

Query: 341 PKKVGDDNGGKMIRMFEP-----GEFRSRDNDGSQSSSGNHHWKRPKKSNQLSVCEDELF 400
           PK  G + GGK IR+ E       E      D S SS  + HWKRP K  ++S   D   
Sbjct: 559 PKNRGRNLGGKEIRLVEAMAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAEVS--GDHPN 618

Query: 401 DGVPSASQFPEFPALLSPLNDPLIEAKGHHSPPSFVSPDVFDSVATRVGNFKAPMDRVVT 460
           +   SA + P+ P L+SPLND L       S  S   P   D     VG  K P+++   
Sbjct: 619 ERGLSALEVPDVP-LVSPLNDHLEGLIEPDSDESLTGPHAVDLAFEEVGTSKTPVNKPAE 678

Query: 461 QSCHP--VTDEI--------------PG-----------QMKTTTHAVVFEI-------- 520
           QS  P  + +EI              P            Q  ++  A + E+        
Sbjct: 679 QSLRPSALLEEIRRGKMTVGGKDLESPSSKEGVCLKASLQKVSSARAPLSELPLGAFNKQ 738

Query: 521 -------SDHCADNVIFNYRKQAALALWESIHQKIIRTPFDRIPRLEQETVKIFHAISET 580
                  S    + V+ N+ ++ AL +WE I  KI++TPF+ IPRL  E   +   +S  
Sbjct: 739 TARNPEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMQTPFEYIPRLRPEIAML---LSTD 798

Query: 581 RAPGLDPLKEIVSAYFKNVEKYNHEG-YTSATTLQALREEEELEAKLEAMKARRGEISKL 610
           +   L+     +      V++   +       T +   E +ELE +L ++     ++S L
Sbjct: 799 KTRQLNEKTSAIKEALTLVKQLRGDAKVIQERTAELSLERKELEKRLRSINTESEQLSIL 858

[Close]

BLAST of Spg011473 vs. NCBI nr
Match: TYK06433.1 (hypothetical protein E5676_scaffold163G001360 [Cucumis melo var. makuwa])

HSP 1 Score: 228.0 bits (580), Expect = 2.2e-55
Identity = 169/578 (29.24%), Postives = 252/578 (43.60%), Query Frame = 0


Query: 161 KVRGPMMVEFSGEGGVKYFDDFEARAHIHKGKYVSWYVNLPPRNKGMVLTDDDKLSFWHS 220
           +VRGP M  FSG+G   YF ++EAR  IH G  + W+ NL  R+K   + D    SF   
Sbjct: 428 EVRGPKMTNFSGKGESIYFGEYEARELIHNGARIQWHANLQNRSKHERMVDTHDSSFLQM 487

Query: 221 SFFISIQSCFLSSRCGSPMVIEAYSPCRFSQQSGFYQDVPNDLSDEVPATNLDNVLRLWM 280
           S+F+S++SC+LSSRC +  +I +YSP RF +Q GFYQD+PND+    PA  LDN+L  W 
Sbjct: 488 SYFVSMRSCYLSSRCENTWIITSYSPYRFGRQFGFYQDLPNDIGGMPPAITLDNILYHWR 547

Query: 281 ICVQAKTLSQVYL-----------------------------------------PAQLKF 340
           IC +  TL ++YL                                         P+Q + 
Sbjct: 548 ICTRRNTLFELYLSVRSLEPCKHVTQRFTDWWTTKHMTYFEDNRHHLVSSAISPPSQPRL 607

Query: 341 PKKVGDDNGGKMIRMFEP-----GEFRSRDNDGSQSSSGNHHWKRPKKSNQLSVCEDELF 400
           PK  G + GGK I + E       E      D S SS  + HWKRP K  ++S       
Sbjct: 608 PKNRGSNLGGKKIGLVEAMAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVS------- 667

Query: 401 DGVPSASQFPE-FPALLSPLNDPLIEAKGHHSPPSFVSPDVFDSVATRVGNFKAPMDRVV 460
                    P+ F  L+ P +D            S   P V DS    VG  K P+++  
Sbjct: 668 ------GDHPDWFARLIEPDSD-----------ESLTGPHVVDSAFEEVGTSKTPVNKPA 727

Query: 461 TQSCHP--VTDEI-PGQMK------------------------TTTHAVV---------- 520
            QS  P  + +EI  G+M                         ++THA +          
Sbjct: 728 EQSLRPSALFEEIRRGKMTVGGKDLESHSSKEGVCPKASLPKVSSTHAPLKFSELPLGTS 787

Query: 521 -------FEISDHCADNVIFNYRKQAALALWESIHQKIIRTPFDRIPRLEQETVKIFHAI 580
                   E S    + V+ N+ ++ AL +WE I  KI+RTPF+ IPRL  E   +   I
Sbjct: 788 NKQTMRNSEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTPFEYIPRLRPEIATVLSGI 847

Query: 581 SETRAPGLDPLKEIVSAYFKNVEKYN--HEGYT---------------------SATTLQ 610
            +  A GL  L+E +++Y K V+ +N     Y+                     + T ++
Sbjct: 848 EKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAQLLSTDKARQLNEKTSTIKEALTLVK 907

[Close]

BLAST of Spg011473 vs. ExPASy TrEMBL
Match: A0A5A7U8L3 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001600 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 2.3e-63
Identity = 170/510 (33.33%), Postives = 249/510 (48.82%), Query Frame = 0


Query: 161 KVRGPMMVEFSGEGGVKYFDDFEARAHIHKGKYVSWYVNLPPRNKGMVLTDDDKLSFWHS 220
           +VRGP M  FSG GG  YF ++EAR  IH G  + W+ NL  R+K   + D    SF   
Sbjct: 407 EVRGPKMTNFSGGGGSIYFGEYEARELIHNGARIQWHANLQNRSKHERMVDTHDSSFLQM 466

Query: 221 SFFISIQSCFLSSRCGSPMVIEAYSPCRFSQQSGFYQDVPNDLSDEVPATNLDNVLRLWM 280
           S+F+S++SC+LSSRC +  +I +YS  RF +Q GFYQD+PND+    PA  LDN+L    
Sbjct: 467 SYFVSMRSCYLSSRCENTWIITSYSSYRFGRQFGFYQDLPNDIGGMPPAITLDNILYHLR 526

Query: 281 ICVQAKTLSQVYLPA-----------------------------------------QLKF 340
           IC +  TLS++YLPA                                         Q + 
Sbjct: 527 ICTRCNTLSELYLPARSLEPCKHVTQQFTDWWTTKHGTYFEDNRHHLVTSVIPSPSQPRL 586

Query: 341 PKKVGDDNGGKMIRMFEP-----GEFRSRDNDGSQSSSGNHHWKRPKKSNQLSVCEDELF 400
           PK  G + GGK IR+ E       E      D S +S  + HWKRP K  ++S   D   
Sbjct: 587 PKNRGSNLGGKEIRLVEAMAPNLEEEVKEHKDESNNSKSDRHWKRPLKKAKVS--GDHPN 646

Query: 401 DGVPSASQFPEFPALLSPLNDPLIEAKGHHSPPSFVSPDVFDSVATRVGNFKAPMDRVVT 460
               SA + P+ P  LSPLND L       S  S   P   DS    VG  K  +++   
Sbjct: 647 GRGLSALEVPDVPP-LSPLNDHLEGLIEPDSDKSLTGPHAVDSAFEEVGTSKTLVNKPAE 706

Query: 461 QSCHP--VTDEI-PGQM------------KTTTHAVVFEISDHCADNVIFNYRKQAALAL 520
           QS HP  + +EI  G+M            K T  +   E S    + V+ N+ ++ AL +
Sbjct: 707 QSLHPSALLEEIRRGKMTVGEKTLRALHPKKTARSP--EPSQWVGEKVVSNFFQKTALCM 766

Query: 521 WESIHQKIIRTPFDRIPRLEQETVKIFHAISETRAPGLDPLKEIVSAYFKNVEKYNHEGY 580
           WE I  KI+RTPF+ IPRL  E   +F  I +  A GL  L+E +++Y K V+ +N    
Sbjct: 767 WEDIQDKIMRTPFEYIPRLRPEIATVFSGIEKIHADGLTSLEEYLNSYLKRVDNFNDVQS 826

Query: 581 TSATTLQALREEEELEAKLEAMKARRGEISKLIVEKKDLLKQHQLEASKLRGTISSIEVA 610
           + +  L +  +  +L  K  A+      + +L  + K  + Q +LE +KL+  ++++E  
Sbjct: 827 SYSAQLLSTDKAHQLNEKTSAINEALTLVKQLRGDVK-AIDQQELEVAKLQDEVNTLEST 886

[Close]

BLAST of Spg011473 vs. ExPASy TrEMBL
Match: A0A5A7SHN8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1204G00400 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.5e-57
Identity = 165/538 (30.67%), Postives = 247/538 (45.91%), Query Frame = 0


Query: 161 KVRGPMMVEFSGEGGVKYFDDFEARAHIHKGKYVSWYVNLPPRNKGMVLTDDDKLSFWHS 220
           +VRGP M  FSGEGG  YF ++EAR  IH G  + W+ NL  R+K   + D    SF   
Sbjct: 379 EVRGPKMTNFSGEGGSIYFGEYEARELIHNGARIQWHANLQNRSKHERMVDTHDSSFLQM 438

Query: 221 SFFISIQSCFLSSRCGSPMVIEAYSPCRFSQQSGFYQDVPNDLSDEVPATNLDNVLRLWM 280
           S+ +S+ SC+LSSRC +  +I +YSP +F +Q GFYQD+PND+    PA  LDN+L  W 
Sbjct: 439 SYSVSMCSCYLSSRCENTWIITSYSPYKFERQFGFYQDLPNDIGGMPPAITLDNILYHWR 498

Query: 281 ICVQAKTLSQVYLPA-----------------------------------------QLKF 340
           IC +  TLS++YLPA                                         Q + 
Sbjct: 499 ICTRRNTLSELYLPARSLEPCKHVTQRFTDWWTTKHGTYFEDNRHHLVSSAIPPPSQSRL 558

Query: 341 PKKVGDDNGGKMIRMFEP-----GEFRSRDNDGSQSSSGNHHWKRPKKSNQLSVCEDELF 400
           PK  G + GGK IR+ E       E      D S SS  + HWKRP K  ++S   D   
Sbjct: 559 PKNRGRNLGGKEIRLVEAMAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAEVS--GDHPN 618

Query: 401 DGVPSASQFPEFPALLSPLNDPLIEAKGHHSPPSFVSPDVFDSVATRVGNFKAPMDRVVT 460
           +   SA + P+ P L+SPLND L       S  S   P   D     VG  K P+++   
Sbjct: 619 ERGLSALEVPDVP-LVSPLNDHLEGLIEPDSDESLTGPHAVDLAFEEVGTSKTPVNKPAE 678

Query: 461 QSCHP--VTDEI--------------PG-----------QMKTTTHAVVFEI-------- 520
           QS  P  + +EI              P            Q  ++  A + E+        
Sbjct: 679 QSLRPSALLEEIRRGKMTVGGKDLESPSSKEGVCLKASLQKVSSARAPLSELPLGAFNKQ 738

Query: 521 -------SDHCADNVIFNYRKQAALALWESIHQKIIRTPFDRIPRLEQETVKIFHAISET 580
                  S    + V+ N+ ++ AL +WE I  KI++TPF+ IPRL  E   +   +S  
Sbjct: 739 TARNPEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMQTPFEYIPRLRPEIAML---LSTD 798

Query: 581 RAPGLDPLKEIVSAYFKNVEKYNHEG-YTSATTLQALREEEELEAKLEAMKARRGEISKL 610
           +   L+     +      V++   +       T +   E +ELE +L ++     ++S L
Sbjct: 799 KTRQLNEKTSAIKEALTLVKQLRGDAKVIQERTAELSLERKELEKRLRSINTESEQLSIL 858

[Close]

BLAST of Spg011473 vs. ExPASy TrEMBL
Match: A0A5D3C3D7 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001360 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.0e-55
Identity = 169/578 (29.24%), Postives = 252/578 (43.60%), Query Frame = 0


Query: 161 KVRGPMMVEFSGEGGVKYFDDFEARAHIHKGKYVSWYVNLPPRNKGMVLTDDDKLSFWHS 220
           +VRGP M  FSG+G   YF ++EAR  IH G  + W+ NL  R+K   + D    SF   
Sbjct: 428 EVRGPKMTNFSGKGESIYFGEYEARELIHNGARIQWHANLQNRSKHERMVDTHDSSFLQM 487

Query: 221 SFFISIQSCFLSSRCGSPMVIEAYSPCRFSQQSGFYQDVPNDLSDEVPATNLDNVLRLWM 280
           S+F+S++SC+LSSRC +  +I +YSP RF +Q GFYQD+PND+    PA  LDN+L  W 
Sbjct: 488 SYFVSMRSCYLSSRCENTWIITSYSPYRFGRQFGFYQDLPNDIGGMPPAITLDNILYHWR 547

Query: 281 ICVQAKTLSQVYL-----------------------------------------PAQLKF 340
           IC +  TL ++YL                                         P+Q + 
Sbjct: 548 ICTRRNTLFELYLSVRSLEPCKHVTQRFTDWWTTKHMTYFEDNRHHLVSSAISPPSQPRL 607

Query: 341 PKKVGDDNGGKMIRMFEP-----GEFRSRDNDGSQSSSGNHHWKRPKKSNQLSVCEDELF 400
           PK  G + GGK I + E       E      D S SS  + HWKRP K  ++S       
Sbjct: 608 PKNRGSNLGGKKIGLVEAMAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVS------- 667

Query: 401 DGVPSASQFPE-FPALLSPLNDPLIEAKGHHSPPSFVSPDVFDSVATRVGNFKAPMDRVV 460
                    P+ F  L+ P +D            S   P V DS    VG  K P+++  
Sbjct: 668 ------GDHPDWFARLIEPDSD-----------ESLTGPHVVDSAFEEVGTSKTPVNKPA 727

Query: 461 TQSCHP--VTDEI-PGQMK------------------------TTTHAVV---------- 520
            QS  P  + +EI  G+M                         ++THA +          
Sbjct: 728 EQSLRPSALFEEIRRGKMTVGGKDLESHSSKEGVCPKASLPKVSSTHAPLKFSELPLGTS 787

Query: 521 -------FEISDHCADNVIFNYRKQAALALWESIHQKIIRTPFDRIPRLEQETVKIFHAI 580
                   E S    + V+ N+ ++ AL +WE I  KI+RTPF+ IPRL  E   +   I
Sbjct: 788 NKQTMRNSEPSQWVGEKVVSNFFQKTALCMWEDIQDKIMRTPFEYIPRLRPEIATVLSGI 847

Query: 581 SETRAPGLDPLKEIVSAYFKNVEKYN--HEGYT---------------------SATTLQ 610
            +  A GL  L+E +++Y K V+ +N     Y+                     + T ++
Sbjct: 848 EKIHADGLTSLEEYLNSYLKRVDNFNDVQSSYSAQLLSTDKARQLNEKTSTIKEALTLVK 907

[Close]

BLAST of Spg011473 vs. ExPASy TrEMBL
Match: A0A5A7UGW6 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G00140 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.3e-55
Identity = 166/539 (30.80%), Postives = 246/539 (45.64%), Query Frame = 0


Query: 161 KVRGPMMVEFSGEGGVKYFDDFEARAHIHKGKYVSWYVNLPPRNKGMVLTDDDKLSFWHS 220
           +VRGP M  FSGEGG  YF ++EAR  IH G  + W+ NL  RNK   + D    SF   
Sbjct: 413 EVRGPKMTNFSGEGGSIYFGEYEARELIHNGVRIQWHANLHNRNKHERMVDTHDSSFLQM 472

Query: 221 SFFISIQSCFLSSRCGSPMVIEAYSPCRFSQQSGFYQDVPNDLSDEVPATNLDNVLRLWM 280
           S+F+S++SC+LSSRC +  +I +YSP RF +Q GFYQD+PND+    PA  LDN+L  W 
Sbjct: 473 SYFVSMRSCYLSSRCENTWIITSYSPYRFGRQFGFYQDLPNDIGGMPPAITLDNILYHWR 532

Query: 281 ICVQAKTLSQVYL-----------------------------------------PAQLKF 340
           IC++  TLS++YL                                         P+Q + 
Sbjct: 533 ICMRRNTLSELYLPVRSLEPCKHVTQRFTDWWTTKHMNYFEDNRHHLVSSAIPPPSQPRL 592

Query: 341 PKKVGDDNGGKMIRMFE---PGEFRSRDNDGSQSSSGNHHWKRPKKSNQLSVCEDELFDG 400
           PK  G + GGK IR+ E   P      +   S S+  + HWKRP K  ++S   D     
Sbjct: 593 PKNRGSNLGGKEIRLVEAMAPNLEDEVNEHESDSNKSDRHWKRPLKKAKVS--GDHPDGR 652

Query: 401 VPSASQFPEFPALLSPLNDPLIEAKGHHSPPSFVSPDVFDSVATRVGNFKAPMDRVVTQS 460
             SA + P+ P  LSPLND L       S  S   P   DS    VG  + P+++   QS
Sbjct: 653 GLSALEVPDVPP-LSPLNDHLEGLIEPDSDESLTGPHAVDSAFEEVGTSRTPVNKPAEQS 712

Query: 461 CHPVT--DEI-PGQMKTTTHAVVFEISDH--CADNVIFNYRKQAALALWESIHQKIIRTP 520
             P T  +EI  G+M      +    S    C    +       A   +  +   +    
Sbjct: 713 LRPSTLLEEIRRGKMTVGGKDLESPSSKEGACPKASLQKVSSAHAPLKFSELPLGVSNKQ 772

Query: 521 FDRIP---RLEQETVKIFHAISETRAPGLDPLKEIVSAYFKNVEKYN-----HEGYTSAT 580
             R P   +L  E   +   I +  A GL  L+E +++Y K VE +N     +    S+T
Sbjct: 773 TMRNPEPSQLRPEIATVLSGIEKIHADGLASLEEYLNSYLKRVENFNDVQSSYSAQLSST 832

Query: 581 ---------------------------------TLQALREEEELEAKLEAMKARRGEISK 610
                                            T++   E +ELE +L+++ A   ++S 
Sbjct: 833 DKACQLNEKTSAIKEALTLVKQLRGDAKVIQERTVELSLERKELEKRLQSINAESEQLSI 892

[Close]

BLAST of Spg011473 vs. ExPASy TrEMBL
Match: A0A5D3D2A0 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003250 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.1e-55
Identity = 161/539 (29.87%), Postives = 238/539 (44.16%), Query Frame = 0


Query: 161 KVRGPMMVEFSGEGGVKYFDDFEARAHIHKGKYVSWYVNLPPRNKGMVLTDDDKLSFWHS 220
           +VRGP M  F  EGG  YF ++EAR  IH G  + W+ NLP +NK   + D    SF  +
Sbjct: 353 EVRGPKMTNFFDEGGSIYFGEYEARELIHNGTRIQWHANLPNKNKHECMVDTHDSSFLQT 412

Query: 221 SFFISIQSCFLSSRCGSPMVIEAYSPCRFSQQSGFYQDVPNDLSDEVPATNLDNVLRLWM 280
           S+F+S++SC+L SRCG+  +I +YS  RF  Q  F+QD+PND+    PA   DN+L  W 
Sbjct: 413 SYFVSMRSCYLFSRCGNTWIITSYSLYRFGWQFCFFQDIPNDIEAMPPAITPDNMLHHWR 472

Query: 281 ICVQAKTLSQVYLPA-----------------------------------------QLKF 340
           IC +  TL+++YLPA                                         Q K 
Sbjct: 473 ICTRHNTLTELYLPARSLEPCKHVTQRFTDWWSMRHGTYFEDNIHHLVSSVIPPPSQPKL 532

Query: 341 PKKVGDDNGGKMIRMFEP-----GEFRSRDNDGSQSSSGNHHWKRPKKSNQLSVCEDELF 400
           PK  G + GGK IR+ E       E  +   D + SS  + HWKRP K  ++S   D+  
Sbjct: 533 PKNRGTNLGGKEIRLVEAMAATLEEEINEHKDETDSSKSDRHWKRPLKKAKVS--SDDPD 592

Query: 401 DGVPSASQFPEFPALLSPLNDPLIEAKGHHSPPSFVSPDVFDSVATRVGNFKAPMDRVVT 460
           +   S        AL SPLN  L       +  S   P V DS    V   K P+ + V 
Sbjct: 593 ERGSS--------ALGSPLNAHLEGLVELDNDESLTGPHVVDSTIEGVDTSKTPVSKPVE 652

Query: 461 QSCHPVT------------------------DEIPG---QMKTTTHAVVF---------- 520
           QS  P T                        D  P    Q  ++THA +           
Sbjct: 653 QSLRPSTLLEEIRRSKMIVRGKSIRNPPSKGDACPEESLQKVSSTHAPLKYSESPLAASN 712

Query: 521 -------EISDHCADNVIFNYRKQAALALWESIHQKIIRTPFDRIPRLEQETVKIFHAIS 580
                  E S    + V+ N+ K+ AL +WE I  KI++TP + IPRL  E   +   I 
Sbjct: 713 RQITRSPEPSQWVGEKVVSNFFKKTALCMWEDIQDKIMQTPLEYIPRLRLEIATVLSGIE 772

Query: 581 ETRAPGLDPLKEIVSAYFKNVEKYNHEGYTSATTLQALREEEELEAKLEAMKARRGEISK 610
           +  A GL PL+E +++Y K V+ +N                 ++++   A          
Sbjct: 773 KIHADGLTPLEEYLNSYLKRVDNFN-----------------DVQSSYSA--------QL 832

The following BLAST results are available for this feature:

BLAST of Spg011473 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745312.1	2.9e-84	35.94	uncharacterized protein LOC116405439 [Cucumis sativus]	[more]
XP_031745312.1	1.9e-11	42.20	uncharacterized protein LOC116405439 [Cucumis sativus]	[more]
KAA0050516.1	4.8e-63	33.33	hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]	[more]
KAA0025356.1	5.2e-57	30.67	hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]	[more]
TYK06433.1	2.2e-55	29.24	hypothetical protein E5676_scaffold163G001360 [Cucumis melo var. makuwa]	[more]

BLAST of Spg011473 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg011473 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U8L3	2.3e-63	33.33	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5A7SHN8	2.5e-57	30.67	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D3C3D7	1.0e-55	29.24	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7UGW6	2.3e-55	30.80	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D3D2A0	3.1e-55	29.87	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Spg011473 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 524..551
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..343
None	No IPR available	PANTHER	PTHR36607	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 158..579

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg011473.1	Spg011473.1	mRNA