Spg011399 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg011399
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	AA_kinase domain-containing protein
Location	scaffold8: 10124877 .. 10125887 (+)
RNA-Seq Expression	Spg011399
Synteny	Spg011399

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATACAGAGGTGGCTTTCCATACTTATGTGGTTAGGAGAGGTATAATAGCTGAGAGGGGTTTGGTTCCTGATGCTAACTCCCAACGTGAACTTACCCATGGTATCATCAAGAAAGGTTGGGGAAGATTAGCTAGGCACCTTGAAGTCGCGGTAGTACATATCGTTAGGCAGTTTTATGCCAACATGGTTGAGGGCTCCATCTCTTCCTTTGTTAGGGGTAGAGCTGATCCTTTTGACTCTGCCTCAATAAACCGATATTATGGCCTTCCAAATCTTGAGAGAGATGGGTAAAATGAGTATGCTATTGAGCACTTTGTTGCCCATCAGATTATAGAACACCTTCGTAGGCCAAGGGTAGAGTGGGTGATAAAGAGGGGTGAGGTGATTAAATTTAAGACATTGTACCTCACGGTAGATAACTGAGTGTGGCACACCTTTATTTGTGCCAAACTCATTCATGTGTCACATCTGAGCGATGTGACTAAGGAGAGGTTGACTCTGTTATTCACCATAGTGACCGGTCGCACCTAGACATAGGGAAAGTGATTTATCATTCCCTGTGCCGGATACGCAGAGGTACCACCACTATCGAGCTTGAGCACCCATTCCCTTATCACAGCCCTTTGTAGGAACCCTGGGGTCGAGTGAGGCCCTCGTGAAGAATTGAGTCATCCCAGGGCTGTTATAGATAGGAATTTTATTTTGACTAGATTTAGGGAGATCGGACCCCAAGTAGCCCACCACCTAGCACCACCACAGCAGGAAGAACAACCAGATGAGCCAGAGGAGCAATGCCACCACGAGCATCCACCTCTCACACTTGAGGCATTGGATGAGAGGTTGGAACAGATGAGACTTGTGCAGCAGAGCCAACAGCGTAGATATGGGAGATATTTTCGACAATCAGAGGCACAGTTTGCTTACTACCAACAGTGCCTAGCTACCTCGATGTCTGGACAACCATTGTCACCTCCTCTGCCACCCTACAAGTCTCCTAAGGATGAGGAGTGA

mRNA sequence

GATACAGAGGTGGCTTTCCATACTTATGTGGTTAGGAGAGGTATAATAGCTGAGAGGGGTTTGGTTCCTGATGCTAACTCCCAACGTGAACTTACCCATGGTATCATCAAGAAAGGTTGGGGAAGATTAGCTAGGCACCTTGAAGTCGCGGTAGTACATATCGTTAGGCAGTTTTATGCCAACATGGTTGAGGGCTCCATCTCTTCCTTTGTTAGGGGTAGAGCTGATCCTTTTGACTCTGCCTCAATAAACCGATATTATGGCCTTCCAAATCTTGAGAGAGATGGATTTAGGGAGATCGGACCCCAAGTAGCCCACCACCTAGCACCACCACAGCAGGAAGAACAACCAGATGAGCCAGAGGAGCAATGCCACCACGAGCATCCACCTCTCACACTTGAGGCATTGGATGAGAGGTTGGAACAGATGAGACTTGTGCAGCAGAGCCAACAGCGTAGATATGGGAGATATTTTCGACAATCAGAGGCACAGTTTGCTTACTACCAACAGTGCCTAGCTACCTCGATGTCTGGACAACCATTGTCACCTCCTCTGCCACCCTACAAGTCTCCTAAGGATGAGGAGTGA

Coding sequence (CDS)

GATACAGAGGTGGCTTTCCATACTTATGTGGTTAGGAGAGGTATAATAGCTGAGAGGGGTTTGGTTCCTGATGCTAACTCCCAACGTGAACTTACCCATGGTATCATCAAGAAAGGTTGGGGAAGATTAGCTAGGCACCTTGAAGTCGCGGTAGTACATATCGTTAGGCAGTTTTATGCCAACATGGTTGAGGGCTCCATCTCTTCCTTTGTTAGGGGTAGAGCTGATCCTTTTGACTCTGCCTCAATAAACCGATATTATGGCCTTCCAAATCTTGAGAGAGATGGATTTAGGGAGATCGGACCCCAAGTAGCCCACCACCTAGCACCACCACAGCAGGAAGAACAACCAGATGAGCCAGAGGAGCAATGCCACCACGAGCATCCACCTCTCACACTTGAGGCATTGGATGAGAGGTTGGAACAGATGAGACTTGTGCAGCAGAGCCAACAGCGTAGATATGGGAGATATTTTCGACAATCAGAGGCACAGTTTGCTTACTACCAACAGTGCCTAGCTACCTCGATGTCTGGACAACCATTGTCACCTCCTCTGCCACCCTACAAGTCTCCTAAGGATGAGGAGTGA

Protein sequence

DTEVAFHTYVVRRGIIAERGLVPDANSQRELTHGIIKKGWGRLARHLEVAVVHIVRQFYANMVEGSISSFVRGRADPFDSASINRYYGLPNLERDGFREIGPQVAHHLAPPQQEEQPDEPEEQCHHEHPPLTLEALDERLEQMRLVQQSQQRRYGRYFRQSEAQFAYYQQCLATSMSGQPLSPPLPPYKSPKDEE

Homology

[Close]

BLAST of Spg011399 vs. NCBI nr
Match: KAA0033353.1 (putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa] >TYJ96637.1 putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa])

HSP 1 Score: 98.6 bits (244), Expect = 6.3e-17
Identity = 49/97 (50.52%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 1   DTEVAFHTYVVRRGIIAERGLVPDANSQRELTHGIIKKGWGRLARHLEVAVVHIVRQFYA 60
           D    +  +VV+  +I ERGL P    Q +L   I+++GW    +  E AVV IVR+FYA
Sbjct: 28  DAADGYKKHVVKSSVIPERGLAPCEVHQPQLYQNIMQRGWSDFVKQPEPAVVSIVREFYA 87

Query: 61  NMVEGSISSFVRGRADPFDSASINRYYGLPNLERDGF 98
           NMVEGS  SFVRGR   FD  +INRYY LPN ERD +
Sbjct: 88  NMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEY 124

[Close]

BLAST of Spg011399 vs. NCBI nr
Match: KGN46897.1 (hypothetical protein Csa_020731 [Cucumis sativus])

HSP 1 Score: 96.3 bits (238), Expect = 3.1e-16
Identity = 48/97 (49.48%), Postives = 60/97 (61.86%), Query Frame = 0


Query: 1   DTEVAFHTYVVRRGIIAERGLVPDANSQRELTHGIIKKGWGRLARHLEVAVVHIVRQFYA 60
           D    +   VV+  +I ERGL P    Q +L   I+++GW    +  E AV+ IVR+FYA
Sbjct: 28  DAADRYRKLVVKSSVIPERGLAPCEVHQPQLFQNIMQRGWSDFVKQPEPAVLSIVREFYA 87

Query: 61  NMVEGSISSFVRGRADPFDSASINRYYGLPNLERDGF 98
           NMVEGS  SFVRGR   FD  +INRYY LPN ERD +
Sbjct: 88  NMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEY 124

[Close]

BLAST of Spg011399 vs. NCBI nr
Match: XP_008458668.1 (PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo])

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-10
Identity = 37/62 (59.68%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 36 IKKGWGRLARHLEVAVVHIVRQFYANMVEGSISSFVRGRADPFDSASINRYYGLPNLERD 95
          +++GW    +  E AVV IVR+FYANMVEGS  SFVRGR   FD  +INRYY LPN ERD
Sbjct: 1  MQRGWSDFVKQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERD 60

Query: 96 GF 98
           +
Sbjct: 61 EY 62

[Close]

BLAST of Spg011399 vs. NCBI nr
Match: EOY26539.1 (Uncharacterized protein TCM_028331 [Theobroma cacao])

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-06
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 35  IIKKGWGRLARHLEVAVVHIVRQFYANMVEGSIS-SFVRGRADPFDSASINRYYGLPNLE 94
           I K+ W      LE AV+ +VR+FYAN+VE     +F RG+  PFDS +INR+YG PNLE
Sbjct: 49  IEKRRWETFCAQLEAAVILVVREFYANVVEHENGVAFGRGKRVPFDSHTINRFYGTPNLE 108

Query: 95  RDGFRE 100
            D + +
Sbjct: 109 NDEYTQ 114

[Close]

BLAST of Spg011399 vs. NCBI nr
Match: PIN01433.1 (hypothetical protein CDL12_26059 [Handroanthus impetiginosus])

HSP 1 Score: 62.8 bits (151), Expect = 3.8e-06
Identity = 35/97 (36.08%), Postives = 52/97 (53.61%), Query Frame = 0


Query: 3   EVAFHTYVVRRGIIAERGLVPDANSQRE-LTHGIIKKGWGRLARHLEVAVVHIVRQFYAN 62
           E  +H+ +V +  IAERG      +  E + H + ++ W       E  V+ +VR+FYAN
Sbjct: 27  EERYHSGLVGKVAIAERGFETKGEAYYEHIYHTVRERKWKTFIASPESGVLPLVREFYAN 86

Query: 63  MVE-GSISSFVRGRADPFDSASINRYYGLPNLERDGF 98
             E  ++   VRGR  PFDS +IN  Y +P +E D F
Sbjct: 87  AAEHKNLKCLVRGREVPFDSVTINELYNIPPIELDAF 123

[Close]

BLAST of Spg011399 vs. ExPASy TrEMBL
Match: A0A5D3BBY3 (Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26G00020 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.1e-17
Identity = 49/97 (50.52%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 1   DTEVAFHTYVVRRGIIAERGLVPDANSQRELTHGIIKKGWGRLARHLEVAVVHIVRQFYA 60
           D    +  +VV+  +I ERGL P    Q +L   I+++GW    +  E AVV IVR+FYA
Sbjct: 28  DAADGYKKHVVKSSVIPERGLAPCEVHQPQLYQNIMQRGWSDFVKQPEPAVVSIVREFYA 87

Query: 61  NMVEGSISSFVRGRADPFDSASINRYYGLPNLERDGF 98
           NMVEGS  SFVRGR   FD  +INRYY LPN ERD +
Sbjct: 88  NMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEY 124

[Close]

BLAST of Spg011399 vs. ExPASy TrEMBL
Match: A0A0A0KER1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.5e-16
Identity = 48/97 (49.48%), Postives = 60/97 (61.86%), Query Frame = 0


Query: 1   DTEVAFHTYVVRRGIIAERGLVPDANSQRELTHGIIKKGWGRLARHLEVAVVHIVRQFYA 60
           D    +   VV+  +I ERGL P    Q +L   I+++GW    +  E AV+ IVR+FYA
Sbjct: 28  DAADRYRKLVVKSSVIPERGLAPCEVHQPQLFQNIMQRGWSDFVKQPEPAVLSIVREFYA 87

Query: 61  NMVEGSISSFVRGRADPFDSASINRYYGLPNLERDGF 98
           NMVEGS  SFVRGR   FD  +INRYY LPN ERD +
Sbjct: 88  NMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEY 124

[Close]

BLAST of Spg011399 vs. ExPASy TrEMBL
Match: A0A0A0KNI1 (AA_kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G468460 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.9e-15
Identity = 47/97 (48.45%), Postives = 58/97 (59.79%), Query Frame = 0


Query: 1   DTEVAFHTYVVRRGIIAERGLVPDANSQRELTHGIIKKGWGRLARHLEVAVVHIVRQFYA 60
           D    +   VV+     ERGL P    Q +L   I+++GW    +  E AV+ IVR+FYA
Sbjct: 28  DAADRYRKLVVKSSTKPERGLAPCEVHQPQLFQNIMQRGWSDFVKQPEPAVLSIVREFYA 87

Query: 61  NMVEGSISSFVRGRADPFDSASINRYYGLPNLERDGF 98
           NMVEGS  SFVRGR   FD  +INRYY LPN ERD +
Sbjct: 88  NMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEY 124

[Close]

BLAST of Spg011399 vs. ExPASy TrEMBL
Match: A0A1S3C7Y0 (uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 7.3e-11
Identity = 37/62 (59.68%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 36 IKKGWGRLARHLEVAVVHIVRQFYANMVEGSISSFVRGRADPFDSASINRYYGLPNLERD 95
          +++GW    +  E AVV IVR+FYANMVEGS  SFVRGR   FD  +INRYY LPN ERD
Sbjct: 1  MQRGWSDFVKQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERD 60

Query: 96 GF 98
           +
Sbjct: 61 EY 62

[Close]

BLAST of Spg011399 vs. ExPASy TrEMBL
Match: A0A061GHL1 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_028331 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 6.4e-07
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 35  IIKKGWGRLARHLEVAVVHIVRQFYANMVEGSIS-SFVRGRADPFDSASINRYYGLPNLE 94
           I K+ W      LE AV+ +VR+FYAN+VE     +F RG+  PFDS +INR+YG PNLE
Sbjct: 49  IEKRRWETFCAQLEAAVILVVREFYANVVEHENGVAFGRGKRVPFDSHTINRFYGTPNLE 108

Query: 95  RDGFRE 100
            D + +
Sbjct: 109 NDEYTQ 114

The following BLAST results are available for this feature:

BLAST of Spg011399 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033353.1	6.3e-17	50.52	putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa]...	[more]
KGN46897.1	3.1e-16	49.48	hypothetical protein Csa_020731 [Cucumis sativus]	[more]
XP_008458668.1	1.5e-10	59.68	PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo]	[more]
EOY26539.1	1.3e-06	48.48	Uncharacterized protein TCM_028331 [Theobroma cacao]	[more]
PIN01433.1	3.8e-06	36.08	hypothetical protein CDL12_26059 [Handroanthus impetiginosus]	[more]

BLAST of Spg011399 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg011399 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BBY3	3.1e-17	50.52	Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuw...	[more]
A0A0A0KER1	1.5e-16	49.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1	[more]
A0A0A0KNI1	2.9e-15	48.45	AA_kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G468460 P...	[more]
A0A1S3C7Y0	7.3e-11	59.68	uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=...	[more]
A0A061GHL1	6.4e-07	48.48	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_028331 PE=4 SV=1	[more]

BLAST of Spg011399 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 133..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg011399.1	Spg011399.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0071704	organic substance metabolic process
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0005488	binding
molecular_function	GO:0016301	kinase activity