Spg011319 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg011319
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold8: 10159746 .. 10161337 (-)
RNA-Seq Expression	Spg011319
Synteny	Spg011319

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATTCTACTTGCTTAGCGCTTAAAAAACTGATCATCCCCATGTTCCAATCAGCTCCTGGACCTTATTTTGGTTCAAAGGTGAACAGAGGTATGCAAAGCCTCCTCAACGGAGACCCAAGAAAACCTCTCGCCCTAGCACGACTCATAACCCACACGGAACAAATATTAAGCATCACGAGTGGTCAGATGAGGAGAACAACTTGTTTCACGAGTTAAAGATTGATACGAAACATAGGGACCAGACATACTTGGGGGCCTTTTTATCTTGTTGGCTTTGCGCCTTTGTGTTTCCCTAAGGGAATGCTAACCACATTCGTCCCAGTGTTTTTAAAGCTGCCAGCTTAATGGTTGAGGGGAAAACTTTCAATCTTGCAATCCACGTCTTTGCCAACATCTACCACGGGTTAGGCAAAGTTTCCAATGCTTCCATTTCAGTTGGACGCATAGATGCTTCTCTCCCCGTACATTACATTTTTGGTTGGCTCGCCCATTACTTTGGTTCCAATTATAAGACTCCAGTGAAAGTTCGAGGTCCTAGCATGGTTGAATTTTCCAGTGAAGGTGGAGTTGTATATTTTGATGAGTTCGAGGCTCGCGAATTAATCCATGGGGGTGCATCCATATCATGGCACACGAACCTTAGTAGGAACAAATACGAAATCATAAAGCATGAAAAGATTAAAAAATTTATACCTTTTTCCTATTTCTCAAGCCTTCGTTCATGCTATTTGTCAGCGCGATGTAAAGATTCACTAGTTATCGAACCCTACAACCCATATCGATTCAACCGCCAGTTTAGCTTTTATCAAGACATACCTAATGACTTAGGAGAAGTTTTTCCCCTAGTCACCTTGGAAAAAAATTTACACCACTGGCTGGTTTGCACGCGAACTAATGCGGAGTTTCAAGTATTTCTTCCAGCTCGCACATTGAATCCTCAAGACCATGTCACCTCACATTATCGAAGTTGGTGCTCTGAAAAGTATGATAATTACCTAGGGGAAGGCATAAGCAAGTGATTGACAGTACCATTCCCTCTCGAACCCAGCCTAGGCTACCTAAAAAAGGTGACTCTAAATTTGGGGGAAAAGAACTCTTTCTGCTCAAGGTTGTCAGATCTCTAGACGATTCAACTGAAGAAGAGAGTCAAAACAGCACTGGAGATCGACACTGGAAAAGAGCAAAAAGACCCAGGAAAGCTTATGATCTTGATGACAAGTCCATCAAGAGTGCTTCTAATGCTTCACAGACTCCTGACGACACTGAGACTTTGGTTGAACAACCCATTTTTTTTCTCTTTTTTTTGTTTTTTTTTTGTTTTTTTTTTTTAACTTAGACCCTCTTTTATTTTTCTTTTGCAGCTTCCTTTAAATGACCGTGTTCAAGAAGAGGAAGAATGTTCGAGCGAGGAATCTTTGACAAGTCCTGATGCTTTTGCTTATTCTGTGAAGAACTTCGGAAGCTCTCATGCATCTTCGAGCAAACAAGTCGTGAATTCGTCTTCTCGTTCTACTGAGAATGTCCCTCAACATACTCAAGCGAAAGTGGTTGCCCCAGTCTTTGAGGTTTCTCAGTTTTGCGCTGATGAT

mRNA sequence

ATGCATTCTACTTGCTTAGCGCTTAAAAAACTGATCATCCCCATGTTCCAATCAGCTCCTGGACCTTATTTTGGTTCAAAGGTGAACAGAGACGATTCAACTGAAGAAGAGAGTCAAAACAGCACTGGAGATCGACACTGGAAAAGAGCAAAAAGACCCAGGAAAGCTTATGATCTTGATGACAAGTCCATCAAGAGTGCTTCTAATGCTTCACAGACTCCTGACGACACTGAGACTTTGCTTCCTTTAAATGACCGTGTTCAAGAAGAGGAAGAATGTTCGAGCGAGGAATCTTTGACAAGTCCTGATGCTTTTGCTTATTCTGTGAAGAACTTCGGAAGCTCTCATGCATCTTCGAGCAAACAAGTCGTGAATTCGTCTTCTCGTTCTACTGAGAATGTCCCTCAACATACTCAAGCGAAAGTGGTTGCCCCAGTCTTTGAGGTTTCTCAGTTTTGCGCTGATGAT

Coding sequence (CDS)

ATGCATTCTACTTGCTTAGCGCTTAAAAAACTGATCATCCCCATGTTCCAATCAGCTCCTGGACCTTATTTTGGTTCAAAGGTGAACAGAGACGATTCAACTGAAGAAGAGAGTCAAAACAGCACTGGAGATCGACACTGGAAAAGAGCAAAAAGACCCAGGAAAGCTTATGATCTTGATGACAAGTCCATCAAGAGTGCTTCTAATGCTTCACAGACTCCTGACGACACTGAGACTTTGCTTCCTTTAAATGACCGTGTTCAAGAAGAGGAAGAATGTTCGAGCGAGGAATCTTTGACAAGTCCTGATGCTTTTGCTTATTCTGTGAAGAACTTCGGAAGCTCTCATGCATCTTCGAGCAAACAAGTCGTGAATTCGTCTTCTCGTTCTACTGAGAATGTCCCTCAACATACTCAAGCGAAAGTGGTTGCCCCAGTCTTTGAGGTTTCTCAGTTTTGCGCTGATGAT

Protein sequence

MHSTCLALKKLIIPMFQSAPGPYFGSKVNRDDSTEEESQNSTGDRHWKRAKRPRKAYDLDDKSIKSASNASQTPDDTETLLPLNDRVQEEEECSSEESLTSPDAFAYSVKNFGSSHASSSKQVVNSSSRSTENVPQHTQAKVVAPVFEVSQFCADD

Homology

The following BLAST results are available for this feature:

BLAST of Spg011319 vs.


Match Name	E-value	Identity	Description

BLAST of Spg011319 vs.


Match Name	E-value	Identity	Description

BLAST of Spg011319 vs.


Match Name	E-value	Identity	Description

BLAST of Spg011319 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..46

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg011319.1	Spg011319.1	mRNA