Spg011271 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg011271
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	E3 ubiquitin protein ligase
Location	scaffold8: 24030139 .. 24044627 (+)
RNA-Seq Expression	Spg011271
Synteny	Spg011271

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGGAGCCAATCATGCTAAATTGGTGTTAATTCGGGCCAATTATGGAGTTTTGGAGCCATCTTGGTGTCTTGGACGGCGAGGAGGTGAAAAGACCCCAGTGTATGGAAGTGGGCCTAAAGCACGACACTAAGAGCCCAAGATTGAAGCCCCGTACCGAGATGTAACGAGACAAGACCGACAAATAAAACAACATGCTCGGATTAGGGATGGCGTCGAGACGCTGCCCCTAGCATCTCGACACCGACGTGAATTTAAAGCAGAATTAAAAGTTCGTGGCGTCGAGACGCCGTGCCTAGTGTCTCGACGCTACAACGTTTTCTATAACTATTAGGTCTACGTTTAGTCCGCCGTTAGGTCAGATCTTTTGTCTCTTTTCGATTGTTTTCTTTTCTTTACTTTCCCAGTTACTGTGTAGACCTTTTTAGGTCATATTCCATTTATTCTTTCATGCGTATCTATGGTTTTACCTTGTTTATGAGTAGCTCAACGTCTTTGTATCGTTGGATTGGGATTATGACTTGATTGTTATTTAACTTGGCTGAGTTTTCTGGTATTTCAATTCTGTTATTGCTGCATTTTTATTGAGTTTTGCATGTTATCCCGTTTAAACCAATACATGAGGCCAGTGTCTTAGGATTGACGACCCTAGGAGATTACTGCTTGTGTATTCTATCAGTTATTTTTAGATAGCCACTGGGTTGATGCAAGACAATCTCTACGGAGTGACGACCCTTGATAGGCCTAGGATGCATGTTAAAGGTCGTATGAATTAGATTTAAATTAAGTTTAAATTTAGTTAATACAATTTCGGACCCACGATCCTAAAGCGACTAGTTTAAGTAGGTAATTGCAAGGTTGCTTATTCTAGATTAGTTAGATATAATTTAGTGGTCATTGCGAGGTCTCGGATGGTTGCTACTTTATGTATGAGGGGTGGCGATTGATAATGATAAAATTGATTAATCTTGTTAATTGCAGAATTCACGGTTAACGGGGTAATTAAACACAGGTTAGTGTAGGGGGTTCCTCCGAGTAACCAAGAAGCCAACCAGACTAATAAAAATCGACATAGAATAATTCTTAGAGAAAACTAGGAAGCCAAGTGAAATAGCATTCAGGCATAAGAAATCCCAATCCAGCGGTTCCCTTTTATGATATTGATTTTTGCTCTAGTTTTCCATTGCATGCTTTATTCTGTCTCCTTTACATTTAGTATTTATTTTTGCTTTGTCCTGCTTTCCAAAACCCCCCTGTTTTATAAACACAAAATTCTGCACCTACTAGATCCCCTTCCCTGTGTTCGACCCCGGCCACTATTTCTACAAAATAGTTATCGTGTCGTGGATTATAAACTTATTTGACACGAGTCCTGACATCTCGTCTCGTCAGTATTCCGAACGGATTCTAAGTATGGAGTAAAACGAATACCAAATAAGAAACGAGATAAGAAAGAAAGCAAAGGATAAATTTGAAAAAAAAAATAAAAAAGAAGAAGAAGAAACAATCAGATCAAAGAAAGAACAAATGGCTAGATGGAAATCAAACTCTAAATGTAGCTCTCCATAAATTAATATCCAAAGGTTAAAATGAAGACTTATGGAATTTAAATCAGCTTTCACAATAAAGAGAAGTTACAATCAAAAGAGACCATGGGCATTGAAGAGTAATTGACTAGAAAATTGAATGTGAAAAAATTGTAACCCCAAATTTATTGCAAGTGGCTAATTAATTTCACAAAATTCAACATGTAACTGAAGCCAATGGATACCAAACAGTCAGATCATAACACAAGTAGAAGTTTAATCATCAGCCAATTCAGATCTAACACACTTTTGAAACAAAGAACAACAAGAAATACAAAAAATTCACAATGTGGTTGTCTCTGTTTTCCATGATATATTATCGACATGACGAATTTTCTATATCAAGAAAATTGAATCTCGAGATCTCATACAAGACAAAGTTGCATATCATATTAAGATCTATGAGATTGCAGAAGACAGGAATATAAAACGATAAACGAAAATGATACTTTTTTTTATTTTATATTTTTGGACAGAATGCAAACAAATGAACAGCAAGAACAAAAAAAAATTACCCGTAGCAGATGCGTTAAGTAGGAAGTCGAGACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGCAAGCTTGCTAAGTGAGTTAAGAGGTTTCAAGGCGGTTATGACTGCAGAAAGCTCAATGAGTCTTTTAGCTCAATTTCAGGTTAGATCTTCTCTAGTATCAGAGATTGTGAGAAGACAGCCAGATGATGGTAACTTACCGAAGATGCTTGCAAAGTCCAAGCAAGGCCCAGAGGCAGAATTTGAGTTGAGAGCAGACGGAGCCATAGTTAAGTAGGGAAGACTATGTGTTCTGGGTATTACTGAGCTTAAGGGTGCGATACTAGAGGAAGCTCATAGTTCAACTTACGCTATGCATCCAGGAAGCACCAAGATGTACAGAACTCTGAAGAAAACTTATTGGTGGCTTGGTATGAAGCGGGAGATAGCTGAATATGTCGATAGATGTTTGATCAGCCAGCAGGTTAAACCAGTGAGACAGAGGCCAGGAGGACTCCTTAATCCACTGCCAGTGCCGGAGTGGAAGTGGGAGCATATTACCATGGATTTTCTGTTTGGATTACCTCGTACTTCTAGTGGACATGATGGTATATGGGTAATAGTGGACAGACTCACCAAGACAGCACGGTTTATACCGATTAAAGTGACGTCTACACTAGATCAGCTAGCTAAGTTATACGTCGACCGGATTGTGAGTCAACATGGAGTGCCAATGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAGTTTTGGCCTAGTGTGTAGAAAGCAATGGGAACAAAGTTAAAGTTCAGTACAGCGTTCCATCCCCAGACAGATGGTCAGTCAGAGAGGACCATCCAGACCTTAGAGGACATGTCACTACAACAAATTATGCTTTTAATGTCGGACGAAAAAAATTTGCGGGCCTTTTAATGTCGGACGAAAAAAACCCACGACCTTTTAATGTCGGATGGCGGGGTTTGAAAATTTTCGGACTTTTAATGTCGGGCATTGCCTGACATTAAAAGTATCTTTTTAATGTCGGTCAATGCCCGACATTAAAAGTCCTTTTTTTAAAAAAAAATTAATTTGTGTTTTTTTAAAACAAAAATTTCTCTCCCGTGAAAATTTACTTTCTCTCTCCCCAACATTTCTCTCTTCCCCCTTCTCTCGTCTTCACTTTCCCCTTCTCTCGTCTTTGCCGTGTGGAAGCTCACTAGAGGCGACTCGAAGAAGTACATCTCTGGAGCGATTCACTTCTCTCGTCTTCAAAACGTGTGGGTTTTTTTGTTCAGCGCGGTGACTGGCCGACATATATCTTTCGACGGCGACTTCATCTCTTCCCCTCACCGTCGGTCACTGAGCTCTTCATCTCCGACACGACGTGGGTTTTTTTGTTCGTGGGTTTGTGAGTTAAAAGTGTAGATGTGTGTGGTTGTACTTCGTGGGTAGCAAATCCATGGTGGTTGTGGCTGTTTGTGCTCAGATCTGAGGTCGTGGTGGTCGTGGGTATCAAATCTGACATTAAAAGACAGTAGATTTGAGCCCGATCAGTTTGATTTTTAAGATTTGAGTGGGATTACTTCTAAGGTTTGTTTTGTTTGCTTCTTTTTAATTTTATAAAATGTAGACCTAAATTTAATTCTGGGATGTCTGTATAAAATTATTTTTTGGGTAAAATACCCTTTTGGTCCCTCATGTTTCGGGTTCGTTTCCAATAGGTCCCGAGGTTTCAAAATCAGACAATCAAGTCCCTACTATTTGGGAAATGTTTCTATTGAGTCCTTCCACTGTTAATTTTTTTAACGGTGCTGACGTGGCACGTTAAAAATATTAAAATATTATTTTTAAATTAAAATAATTAAATAATAAAAAATTAAAAAAAAAAATCTTCCTTCCTCTCTTCTCTCTCCCTCATCTTCGTCTCTCTCTCTCTTCTTGTAATTTTCTTCCCCTCTCTCTTCTCTTCTCTTTCTCTCTCCCCCACCCTTCCCCTCGTTCTATTCTACCGAGTTCGAGCTCTGAGGAAAAATGGAGACTACGGATTGCATCTACCGAAACCCTAGCGCACCATCAAAGATCTTCTCTCGAAGATGACTTTGAGGAAAAAATCGGCCAGATGACACATTGAGCGCAACCTCCATTCCCCTTCCCCTTCCTTCTCTTTCCCCTCCCCTTCCCCTCCTCGTCGTCGATGACCGCCGCCGCCGCCTTCTTCATCTTCTCACCTGCCTCACTCCTTTTTTTTTCTTCCAAACCGAGCCCACCACTCCCCTTTCTATTTCTTCAAAACCAAACCCACCCTCTTCCTTTGGGCAATCTCCACTGTTTCGGGCTAAATCGTAGCAGAAAAACTACAAAGATAAAATCATGGAAATTCCAGGATCCTCAAATTTCAAGCGATTCATGACCAAAAAAGAAACAAGAACAAAGAAGAAACAAGACAGAAACCAAAAGAACATATATCAAACACCAAACTGAAACAAAAAAACACAATAAAATTTGAAAGAACCAAGCCAGAAGGGAGGAGAATAAGTCCAAATCTATTAAATTTCGAAACTCTACAAATCAATCCCAATGGCCCCGAAGAACCAGAGACCCCAATCGAAATACGGATTTGAAGACTGGCGGTGATGGCCTGCAACCTCGACGAAGAGGGGCTTATCGGAGAGCTCTGCAACGGTTTCAATTTGCTGATGGACAGAGAGAAATGAGTGATAAATTTCGAGAGCTGGAAGAGGGATGTGACGACGCTAGGGCTCAACCGCTAGGGGATCTCACCGATGACGAGTTTAGAGGGATGTTGAGGGAAGGGGATTCCGACGACGTGTTGGTGAGAATCTGAAGAAGGCGGCGGCGGCGGTTGCGGTGATCATCAGCAGCAAGAGGGGAAGTGGAAGGGGAAAGAAAAGGAAGGGGAAGGGGAAGGGGAAGGGAAGGGGAGGGGAATCGAGCGTGGGGAAGGAGAGAGAGGAAAAGATTTTTTTTTTTTACTTTTTTTACTAATTTATTATTTAAATTAAATTTTAATATTTTTTAAAAATAATATTTTAATATTTTTAACGTGCCACATCAGCACTGTTAAAAAAATTAACGGTGGAGGGACTCAATAGAAGCATTTCCCAAACAGTAGGGACTTGATTGTCCGATTTTGAAACCTAGGGACCTATTGGAAACGAACCTGAAATATGAGGGATCAAAAGGGTATTTTACCCTTATTTTTTTCTTGTTGGTTGGATTGTGGTGTAATGCTTCTGTTTGGTTTAGTGGGGAGGAGGAAAATTCTTGTTTCTCTATTTATTATTGTTGTTATTGTCCTTTTTTCATTGTCTATTAAGTTAAACGGAAGCTTTATTTTGGATGATGGATTATGCCCTTTGAGTCTGCTATTGCTCAGGCATTGGAGTCATCTATCAGACAACTTTAAATATTATCTTTTGTTGTGTAAGATGATGATTGAATTTTGATCTGCGCCTGTCTACTTTAGATCTTAATGGAAAAGGGGATCTAGTTTCTTGTAAGGTTTTGTTATTAGATGGTTTATTTAAGAGATTATATAGTTTGTGGAGTTGTGTAAAAAGTTACTGTAAGTTTGTTTTATTTGTTTTTGTGGATGTGTTGGAAACTATAGTGGCATGATACAACCCCTTGATTACTATGTTTTTTGTTTATGATATGATATTGGATCTCTGTGCAATTCTTGTATTTAAGGTTGTCTCAATAATTTGCTCCATTTGGTTGATGAAAATGTTTCCAATACATGCTCCCACCTTGGGTGTAGTGAATGGAAATTTATCACCCAAAAAAACTGCAGAAAGAACTATAGGGTTTCGAGAATTAAATGATTCCATTGAGGAAGCTAAGGTATAGTTGTACAATTGGTCTCTCTCTCTCTCACTCAGGCAGACACCTAATGTTATGAACAATGATATAGATACTGGCAGCTGGTCGTCTTTTTGAGCTTCAAGATGCCTGTGAAGATAATGTAACCTTGTCAAATCAATTCCAAGATATTGAGGTTTGCAATCTTCTTCACTTAATATCCTGTTTTTGGGATCACTTTTCCATGTTTACATTTTTTCCCACGGTGAACTTTGAATATTTTCTCTCTATTCTTGAAGAATGATTTGAAGGATGATAAGTATGTACATTCATCCCGCTTATACATTTTACTAAACGACCAACTCCAACATTTGACTGCTGAAATGGAGAGTTACAAATCATTGACCGAAACTTTACAGGTTAAATAATTTGTCTTAACTTTCATGTTATTTGTTATTCACTATGATACTAGGTTCTTTTAAAGGTTAGATTTCAGACTGACAGGTCTCATGTCATGATAAGGGGAGAAAGACTTGAATGGCAAATTGGAGTTTGTAGATGTTGCTAGAAGCTCCATTGATAATAACAGTTCTCGAATTGAGGAACTAGAGCATCAACTGCAAAAAATATTAGTGGAAAAAAAATGATATAGAGATTGAAATGGAAGAAGCCATTCAAGATTCTTGCAAGTTCATAAGATGTGATCTCTTTCTTCCTTTGGTATTGAAATGTGTTATTGATTTGCAAAGGTGTTTCCTTTCATAGCAATAGAGGATATCAAAGGAGAATTTCATGTTATGGCGTCAGCTTTGTCTAAAGAAATGGGGATGATGGAATCTCAGCTAAAACGTTGGAAGGAGACAGCTCATGAAGCAATTTTTGTACGTGAGAAAGTGCAGGCACGCGAGACTTTATTAGTTGGGAAGGTTGGGTCTTACCCTTTTTATCCATCTATATCAATTAGATGAATAATGAATTTATACTGTAATGATTTTCTGCCTTGTGTTGTTCCTTCTTCCCCTTTGGTGACTAGTGTTAATAAATATTCATGCCTTGAAGAGAATTGGATATGCAGGTAGGGGTTTGGAATTTGGCATTGATAAATTTGTTAATGTTGGTGTTGTGTTTGCTGATCTTGAGTGCTTGTTAGTTCCTATATTTTCTATAGTACATACTGAATTTTTAAGAAGTGAGAAAAGTCTGATTATTCCAATTCTTCTCTTTGGACATATGGTTTGATATTGTTTTTCAAAATCTTATCTGTAGGAGAACAGTTTAAGCTAGTATATAAATGTGTCTACTATCTACATCGTGGTTCTGACATTGACACTCTTTGAAGAAAGATGTCAACATGGTTTTGTAATGCAATTTTTTTAGGCCCCGTTTGATAACCATTTAGGGCCCATTTGATAACCATTTCATTTTCTGTTTTCTGTTTTTGTTTTTCATTTTTTAAAAATAGGGGTGTTTGATAACCATTTTTGTTTTCTGTTTTCTGTTTTTTAAAAACGTTTTTGAAATTATAAGTAAATTTCAAAAACCAAAAAAAGTAGTTTTTAAAAACAGATTTCTGTTTTTCAAAAACTCATTTTTCTTCTAATGCTTACTTTTCTCCTCTTTTACCTCTCTCTCCAACAAATTTCTTTCTCTATTTTTTTTCTCTCTCTAAAATTTATTTTCTCTCTCTAAATTTCTCTCTCAAAACTTTTTTTTTCTCTATAACTTGTCTATTTCTAAAAACTTGTCAATACCTTTTCTCTCCTCAATAAACATGTTCTAATTTTTCTTTTGGAAAAAAAAAAGTTACCAAAATTTTCTATCGCTACAACTTTATTTTTCTAATTTATCGTTAGTTCTTTAGCATATATTTTACTCTTAACTTTACTATCTCTCTAAATTTTCTTTTTTTATTTAATTTTTTTAATCTAAAATTTATCGCTTTTACTCTAACTTGTTTTCTATTTTTTCTCTAACTAATATCTTTTCTCGAGTCTAACTAATATTCTTTCTCTAAACATTTTCTTTCATCTCTCTAAATTTTCTATGTTTAACTTTTCTCTCGTCTTTTCAAAAAAAAAAATCTCTTGAAAACATTTATATTTGTGTCTCTAAATTTTTGTTTCAAAGTCTTTACACATTTTTCTCTCTCTAAAATATCTTTTCATCTTTCTAATTTTTAAAAAACTGAAAACCAAAAACAGTTACCAAACAAGGTTCGTTTTCTGTTTTTTAAAAACAGAAAACAAAAAACAGTTATCAAACATATGTGGTTTTTGTTTTTAAAAAACAGGAAACCAAAAACCAAAAACCAAAAACAGAAAAACCAAAAACCAAAAACTGAAATGGTTATCAAACGGGCCCTTAGTTTTTGGTTTTTGGTTTTTTAAAATTAAGCTTAAAAACACTACATGCACCTACAAGTTTATTTGTTTTGTTATTTAGTCTCTTCTCATGTTTTCAAAAACTAAGTAAAAATTTGAAAACTAGAAAAAATAGTTTTTAGAAACTTGCTTTTGTTTTTGGAATTTGGCTAGGAATTAAAGTGTGTCTTCAACAAAGATGAAAACCATTGTAAGTAAATTGGATGAAAACAAGCATACTTTTCAAAAACCAAAAACCAAAAACCAAAAACCAAATGGTTATCAAACGGGGCCTTATTTATTCCCTTCTTTTGGAGGCCTGACTATTTATTTCTAGCCTTTGGATCTCCTAATATTTTTTTTCTTAAAGTTCGATTTATCGTAGGAGGGACAATGAATTTTGAGGAGAGTTAGTATACCTTGAAGTTTATTGTCATTGCTTGAGTATTCTAATATATAAAATGCTTGCAACAATGACAGGCTTGTATGAAGGTGGAGTTTGGAAAATCCACATTGAACTACCTCACGCTTATCCATACAAGTCCCCTTCTATTGGGTTTGTGAACAAGATTTATCATCCAAATGTTGATGAACTGTGAGCAACCTAGGTGGTTCTTATTTTTGTTAGGTGAAGTAATTAAAGGCTTTCTATTATTGACAAAAAAAAAAAAAATGTTATATGATGCACTCCAAAGCTCCAAGGTCTTATAGCTCATATGGTAGTTTTACCATCTCACTCATTGCAATTATTCTTTTTTGAGTTTTTATTGGTTGTAGTTTGAACTTGGATAGTTGACTATATAATTGTTAGCATATGTAGATATAATCGCTTTAATCTGTCTATCATTTGTTAGTTATTGAGTTTGGTTTAAGCTACGTTTTTCTCTTATTTCCGTAACGCTAACCAAAGTTTCAAACTATATTCATTATGATTTTATTGACATATTTGATAAAGGTATACTTCTTGATGTTTGAATCCTTTTTGGATATTATGCATGGTCATTACACTAGATTTTCCTTTATCAGATATGACAACCACCCCAATTTGATGCTGCTCCATAATGTATTGTAGTGTTGACGTGGATTTAGTGTTGGCATTGATGGGCTTTTGTTTCGTGGATACATTTTTTGGCATTTTCAACCATTTCAATTTGATTGCTCCATAATGTATTTTTCTCTATTTCAAGCATTAATGTATTGAATTTTGTAAGCTTTTTCTCTTTTTGTTACAGGTCTCTCTCTTTTTTCTCTTTTAATTTGTACTCTAGTTTGATTTACTGAAGTTTGGTGGCGTTTAACATAAATGTATTCTGACTTTGACGTTGGGGTGAAAACTAAAATCAATAGTGTTTGGTTTTGGATGAAATGGTGTCTTGTCTAACCTGGTTTCTCACTATAGGTTCTATAATGTTGAGAGCATGTGTCCTTCAGTTTAAGGGAAGCTGAGATACCTCCTTATCACTTATGGAGTTCGCTTATAATAACAACTATCAATCTAGTATCGGCATGGCACCATTCGAGGCTTTGTATGGCAGACCATGCAGAACTCCTGTGTTCTGGAACGAAGTGGGAGAGCGAAAGCTAGTTGCTCCTGAGTTGATACAAGTTACGTCAGACAGTATCAAGCTGATTAGAGAGAACCTGAAAATAGCTCAGGATCGACAGAAGAGCTATGCAGATAAGCGACGAAGAGACTTAGAGTTCCAGGTTGGAGATCAAGTTTTCTTAAAGTTATCTCCGTGGAGAGGTGTTCTTCGCTTTGGGAGAAAAGGTAAGCTGAGTCCTAGATATATTGGTCCTTACCAGATAATAGAACGAGTTGGACCAGCAACCTATAAACTTGAGTTGCCAGCGGAACTCGCTCGAATACATGATGTTTTTCATGTGTCCATGTTGAGGAAATATATTCCAGATCCATCCCATGTGTTGCAAGTGCAACCGATTGAGCTGAAAGAAGACTTGAGTTATAAAGAGGAAGCGGTTCAGATCCTCGACAGAAAGGAGCAAGTTTTGAGGAACAAAACGATCCCACTCGTGAAAGTTCTTTGGAGACATCATGGAGTAGATGAGGCAACCTGGGAGTCAGAAGATCAGATGAAGAGGAGTTACCCGATACTCTTCACCTAAGGGAGAGGTAAGTTGTAACCCCGAGACTTTCCTTGGATTATTTTCTCTTGTCATCTATTTGTTGTTATTCATTGTTGAAGAAAAATGGCAAGGTTTTGTGGTTCATTGTGGATTCATGGTTGAATTTAAGTTGTTGGGATTTACTAATTTAAAAGAAGAAAGAAAAGAAAGGAAAAGAAAGAAATGGGAAAATCTGGCGGTGCTTTAAATTCCACTCCACCGACAAGTTCCTTTTCAGCCCACTTCCAGCCACATTTCTCATCATTTTCCATCCAAAATTCAGAGCATTTGAGGGAGAGAGTGAAGGAAGGAGAACAAGAAGGTTTCTAGGGTTTTGAGGTTGAAGAAGATAGGAAATAACTCAAGCAAAGGCAGCCATAGCAGAATCTGAGTTCAACCTGTCTACCTCTGGTTTTTGTTTCGGTTTGAGCTACACAAGAAGAACTAAGAGGTGAGGTTTGGTTTTCTTTAAATTTAATCCATTTTCTAAAAACTTTCATGAAGGAAGCTTGAGCTAAATCTGATGGGAAGTTAATGGTTTTTGAAATGGAAAACAGAGCACAGGATTTTCGTGCAAACCAGAAAGATCTCTGGTTTTCTCTGGTTGTTCGAGCATTCTGGTTGTACAAGTTGCATCAGAAGCTCTATTTGGTATGGTGGGAAAGCTGATTCAACTTCCTACAACTTTCATGAATAATTTGTGAGCCAAAAATGACTTGAATTAGGTTTAATTTCAGGAGGAAGATAGAGGGTAGCAGAGAAGCTCGAATCTGTGTCTTCTGTGTTTGGGGCATTTCTGGACAACTTGGTTGGTAATCACGTTTTCATTTCTTCAGGTAAGTTGTAGAGTGTTCGAAAATGAAGCGTTTGATGTATAGTACATTAACTTTGGTTAAGTATTGAGGAAGTTATGAGTGTTGGAAGTTGTGGTATTGAATCTGGAAAATCTGGAAATGTAGAATGTGAAGTGTGATTTTTGATTCAAGTGTTTAGAATTCATGAGCATGGAAAGACAAAACTACTTATGGTTCTAATGCTCGGTTTTGGTTGTTTGGCAGGCACAGAGGAAATAGGTCGAGTCTACAGACCAAAAAACTAGCTAAGACTGTGAGTGACAAAACGAATTTCGAAAATTGTTTCCAAACGGTTGTTCATGTTTAGATGTTTTACATGCTTTCTATGAATGATACATGATTTCTATGAACGGTTTTAAGCATAAGTGTTGAGCTTAGATTTTCTAATGAGGTTTATATACGAGCACGTGGTTAATGACTTAATGAAAAGTAGTTGAAATGATATCTTTTAAAGCAAAGTATGTATTAGCAAGTACTCTTTAAAGATTTTCAGTTTTTCACGAGCTAGCTGAGTAAGCTAAAGTTTTACGAAAGATAAGGATAAGCAGGCATGTTTTAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGTTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGTTGGGCAGACCCCCTACGACAAAGATGATGGGAGTGTTGGGCGGGCCCCACTACATCGTAGAGCTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTTGATTTGTCATGTTAGCTAAGATGTTTATATAATTGATATGCCTTGCGAGATTTTAATAACGTACTTGCGAGTTATTTGAGAAAGCTTTTATTATTTCACATTTATGTTTAATGCTTGATTGAACAGATTTATACGTTTAAAGGTTTATCACGTGTTCTGATTTGCAAATCTACAGTATTTAAGTTAGTCACTCACTAGGCTTCGTAGCTCACTCTTTCAAAATGTTTTCCCGCTTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTACCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGGTGTATATTTAGTCTGTCTATATTGTAAATGTTTTGTAAGGATTGGATAATTTACGGTTTGTGTAGGTTCTAGAGGTCGTGGTTGTATAAACCCCAGTTGAATATGTTTCTGGTTGTGATATCTATATCAGGTTATTTTCCAAACCGAGTTATGTCAGGGTTGCACCTCGTGTATGTTAAAGGGTTTTCAAAGATTCCGTTGTGTTGTGTTTCATGTAAAGTATTTTACATCAGAGATTAATATGTCTATCAGGTTTAACGTTTCAGCAGGGTCAATAGGGATCGTTAGAGGAGACGATGTCTGTTGGCTTCACGCCATCTCCCTGACTAAGCTAGCAGGTAGTTTGGGAGGGGGTGTGACAACTATAATGATCACTAGCTGAATAGTAACTTAAAACATTAAACGCAAAGCTTAAAAACTGAAAATTACAATAAAAGCTCAAATCTGAGATTTACCTTCCAATCAGTTAACTCTAAAGTTTGTAACCATCTTGGATTCTTGTAGCATGATTAAGACTCATCGGTTCGTATCAGTGCTTCAACTGACCGGTTACAAAAATGTGTGCCTTGATCACTGTTTATGGCCCGTGGGACTCCATACGTGTTAAAAATGTTAGTCTTTAAGAAACCGACAACTACTTTAGAGTCGTCAGTTTTGGTGGTTGACGGGTCCGACTTGTCAAAGGTCATGTTGGTCAAATAAATTTATAATCCACAGCACTATAACTATTTTGTAGAAATAGTGGTCGGGGTCGAACACAGGGAAGGGGACCTAGCAGATGCAGAATTTTGTGCTTATAAAACAGGGGGGATTTCGAAAAGAAGGACGAAGCAAAAATAAATGTTGAATGTAAAGGAGACAAAATAAGGCATGTGAATGAGAAATAAGACAAACTAATATCATGAAAGGGATCGTTGGATTAGAATTTCTTATGCCTGACTGCCATTTCACTTGGCTTCCTAGTTTTCTCTAATAATTATTCTATGCCGACTTTTATTAGTCCAGTTGGCTTCTTGGTTACTCGGAAGACACTTCCTACACTAACCTGTGCTAATTAATCCGTTAACCGTGAATTCTGCAGTTAACAAGATTAATCAATTTTTATCTTTATCGACCGCCACCCTTCATACATAAAGTAGCAACCACCCGAGATCTCCCAATGGCCACTAAATTATATCTAACTAATCTAGAATAAACAATTTTACAATCACCTACTTCAATTAGTCGCTTTAGGGTCGTTGGTCCGAAATTGTATTAACTAAATTTATATGCAATTTAAATCTAATTCATACAACCTTTAATATGCATCCTAGGCCTATCAAGGGTCGTCTCACGTAGAGAGTGACTTTCCTCAGCCTAGTGGCTATCTAAAAATAACTGATAGAATACACAAGCGGTAATCACATAGGGTCGCCAATCCTAATAGACTAGCTTCATGTATTGGTTTAAACGGGATAACATGCAAAACTTAATAGAAACACAGCAAGAATAGTACTTAAAACACCAGAAAACTCAGCCAAATTCAATAGCAATCAAGGCATAATCTCAATCCAACGATATAGATGCGTTTAGCTACTCATAAACAAAGTAAAAACACAAACTAATACAAAAGATTGCATAAATAATGACCAAACAAGGTCTATTCAGCTGCTGGAAAGTAAAAGAGACGAAAGAAATCGTAAAGGGACCAAATTTCTAACCTTACGGTGGACTAAACCGAGACCTAATATTTATCGAAAATGTCACAGCGTCGAGACGCCAAGGGCAGCGTCTCCATGCCACGGACTTTAGTCTCCATGTCAATTTCTCGTCGGCGTCGAGACGCCAGAGGCAGCGTCTCCACGCCACGGACTTTAGTCATTGTGTCAATTTCGCGTCAGCGTCGAGACGCCAGGGGTGGCGTCTCAACTTCGTCCCTAATCCGAGCATGCTACTTTTCTTCTCGGCCTTGTCTCGCTTCATCTCAGTACGGGGCTCCAATCTTCGGCTCTTGGTGTCGTTCTTCAGTCCCGCTTCAATTCAATGGGTTTTTTCACCTCCTCGTCGTCCAAGACACCGAGATGGCTCCAAAACTCCATAATTGGCCCGAATTAACACCAATTTAG

mRNA sequence

ATGTCAGGAGCCAATCATGCTAAATTGGTGTTAATTCGGGCCAATTATGGAGTTTTGGAGCCATCTTGGTGTCTTGGACGGCGAGGAGCCACTGGGTTGATGCAAGACAATCTCTACGGAGTGACGACCCTTGATAGGCCTAGGATGCATGTTAAAGAATTCACGGTTAACGGGGTAATTAAACACAGAAGGGAGGAGAATAAGTCCAAATCTATTAAATTTCGAAACTCTACAAATCAATCCCAATGGCCCCGAAGAACCAGAGACCCCAATCGAAATACGGATTTGAAGACTGGCGGTGATGGCCTGCAACCTCGACGAAGAGGGGCTTATCGGAGAGCTCTGCAACGGTTTCAATTTGCTGATGGACAGAGAGAAATGAGTGATAAATTTCGAGAGCTGGAAGAGGGATGTGACGACGCTAGGGCTCAACCGCTAGGGGATCTCACCGATGACGAGTTTAGAGGGATGTTGAGGGAAGGGGATTCCGACGACGTGTTGATACTGGCAGCTGGTCGTCTTTTTGAGCTTCAAGATGCCTGTGAAGATAATGTAACCTTGTCAAATCAATTCCAAGATATTGAGGTGTTTCCTTTCATAGCAATAGAGGATATCAAAGGAGAATTTCATGTTATGGCGTCAGCTTTGTCTAAAGAAATGGGGATGATGGAATCTCAGCTAAAACGTTGGAAGGAGACAGCTCATGAAGCAATTTTTGTACGTGAGAAAGTGCAGGCACGCGAGACTTTATTAGTTGGGAAGAGAATTGGATATGCAGGTAGGGGTTTGGAATTTGGCATTGATAAATTTGTTAATGTTGGTGTTGTGTTTGCTGATCTTGAGTGCTTAGCACAGGATTTTCGTGCAAACCAGAAAGATCTCTGGTTTTCTCTGGTTGTTCGAGCATTCTGGTTGTACAAGTTGCATCAGAAGCTCTATTTGGTATGGCACAGAGGAAATAGGTCGAGTCTACAGACCAAAAAACTAGCTAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTACCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGCGTCGAGACGCCAAGGGCAGCGTCTCCATGCCACGGACTTTAGTCTCCATGTCAATTTCTCGTCGGCGTCGAGACGCCAGAGGCAGCGTCTCCACGCCACGGACTTTAGTCATTGTGTCAATTTCGCGTCAGCGTCGAGACGCCAGGGGTGGCGTCTCAACTTCGTCCCTAATCCGAGCATGCTACTTTTCTTCTCGGCCTTGTCTCGCTTCATCTCAGTACGGGGCTCCAATCTTCGGCTCTTGGTGTCGTTCTTCAGTCCCGCTTCAATTCAATGGGTTTTTTCACCTCCTCGTCGTCCAAGACACCGAGATGGCTCCAAAACTCCATAATTGGCCCGAATTAACACCAATTTAG

Coding sequence (CDS)

ATGTCAGGAGCCAATCATGCTAAATTGGTGTTAATTCGGGCCAATTATGGAGTTTTGGAGCCATCTTGGTGTCTTGGACGGCGAGGAGCCACTGGGTTGATGCAAGACAATCTCTACGGAGTGACGACCCTTGATAGGCCTAGGATGCATGTTAAAGAATTCACGGTTAACGGGGTAATTAAACACAGAAGGGAGGAGAATAAGTCCAAATCTATTAAATTTCGAAACTCTACAAATCAATCCCAATGGCCCCGAAGAACCAGAGACCCCAATCGAAATACGGATTTGAAGACTGGCGGTGATGGCCTGCAACCTCGACGAAGAGGGGCTTATCGGAGAGCTCTGCAACGGTTTCAATTTGCTGATGGACAGAGAGAAATGAGTGATAAATTTCGAGAGCTGGAAGAGGGATGTGACGACGCTAGGGCTCAACCGCTAGGGGATCTCACCGATGACGAGTTTAGAGGGATGTTGAGGGAAGGGGATTCCGACGACGTGTTGATACTGGCAGCTGGTCGTCTTTTTGAGCTTCAAGATGCCTGTGAAGATAATGTAACCTTGTCAAATCAATTCCAAGATATTGAGGTGTTTCCTTTCATAGCAATAGAGGATATCAAAGGAGAATTTCATGTTATGGCGTCAGCTTTGTCTAAAGAAATGGGGATGATGGAATCTCAGCTAAAACGTTGGAAGGAGACAGCTCATGAAGCAATTTTTGTACGTGAGAAAGTGCAGGCACGCGAGACTTTATTAGTTGGGAAGAGAATTGGATATGCAGGTAGGGGTTTGGAATTTGGCATTGATAAATTTGTTAATGTTGGTGTTGTGTTTGCTGATCTTGAGTGCTTAGCACAGGATTTTCGTGCAAACCAGAAAGATCTCTGGTTTTCTCTGGTTGTTCGAGCATTCTGGTTGTACAAGTTGCATCAGAAGCTCTATTTGGTATGGCACAGAGGAAATAGGTCGAGTCTACAGACCAAAAAACTAGCTAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTACCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGCGTCGAGACGCCAAGGGCAGCGTCTCCATGCCACGGACTTTAGTCTCCATGTCAATTTCTCGTCGGCGTCGAGACGCCAGAGGCAGCGTCTCCACGCCACGGACTTTAGTCATTGTGTCAATTTCGCGTCAGCGTCGAGACGCCAGGGGTGGCGTCTCAACTTCGTCCCTAATCCGAGCATGCTACTTTTCTTCTCGGCCTTGTCTCGCTTCATCTCAGTACGGGGCTCCAATCTTCGGCTCTTGGTGTCGTTCTTCAGTCCCGCTTCAATTCAATGGGTTTTTTCACCTCCTCGTCGTCCAAGACACCGAGATGGCTCCAAAACTCCATAATTGGCCCGAATTAACACCAATTTAG

Protein sequence

MSGANHAKLVLIRANYGVLEPSWCLGRRGATGLMQDNLYGVTTLDRPRMHVKEFTVNGVIKHRREENKSKSIKFRNSTNQSQWPRRTRDPNRNTDLKTGGDGLQPRRRGAYRRALQRFQFADGQREMSDKFRELEEGCDDARAQPLGDLTDDEFRGMLREGDSDDVLILAAGRLFELQDACEDNVTLSNQFQDIEVFPFIAIEDIKGEFHVMASALSKEMGMMESQLKRWKETAHEAIFVREKVQARETLLVGKRIGYAGRGLEFGIDKFVNVGVVFADLECLAQDFRANQKDLWFSLVVRAFWLYKLHQKLYLVWHRGNRSSLQTKKLAKTVEIELPVPDTLPTSAESSRSSSSTWVERRDAKGSVSMPRTLVSMSISRRRRDARGSVSTPRTLVIVSISRQRRDARGGVSTSSLIRACYFSSRPCLASSQYGAPIFGSWCRSSVPLQFNGFFHLLVVQDTEMAPKLHNWPELTPI

Homology

[Close]

BLAST of Spg011271 vs. NCBI nr
Match: XP_023513144.1 (E3 ubiquitin-protein ligase BRE1-like 2 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 93.6 bits (231), Expect = 5.0e-15
Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 203 EDIKGEFHVMASALSKEMGMMESQLKRWKETAHEAIFVREKVQARETLLVGKR 256
           EDIKGEFHVMASALSKEMGMMESQLKRWKET HEA+ VREKVQA ETLL+ K+
Sbjct: 260 EDIKGEFHVMASALSKEMGMMESQLKRWKETGHEAVTVREKVQALETLLIEKK 312

[Close]

BLAST of Spg011271 vs. NCBI nr
Match: KAG7010233.1 (E3 ubiquitin-protein ligase BRE1-like 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 93.6 bits (231), Expect = 5.0e-15
Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 203 EDIKGEFHVMASALSKEMGMMESQLKRWKETAHEAIFVREKVQARETLLVGKR 256
           EDIKGEFHVMASALSKEMGMMESQLKRWKET HEA+ VREKVQA ETLL+ K+
Sbjct: 428 EDIKGEFHVMASALSKEMGMMESQLKRWKETGHEAVTVREKVQALETLLIEKK 480

[Close]

BLAST of Spg011271 vs. NCBI nr
Match: XP_023513143.1 (E3 ubiquitin-protein ligase BRE1-like 2 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 93.6 bits (231), Expect = 5.0e-15
Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 203 EDIKGEFHVMASALSKEMGMMESQLKRWKETAHEAIFVREKVQARETLLVGKR 256
           EDIKGEFHVMASALSKEMGMMESQLKRWKET HEA+ VREKVQA ETLL+ K+
Sbjct: 450 EDIKGEFHVMASALSKEMGMMESQLKRWKETGHEAVTVREKVQALETLLIEKK 502

[Close]

BLAST of Spg011271 vs. NCBI nr
Match: XP_022943633.1 (E3 ubiquitin-protein ligase BRE1-like 2 isoform X2 [Cucurbita moschata])

HSP 1 Score: 93.6 bits (231), Expect = 5.0e-15
Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 203 EDIKGEFHVMASALSKEMGMMESQLKRWKETAHEAIFVREKVQARETLLVGKR 256
           EDIKGEFHVMASALSKEMGMMESQLKRWKET HEA+ VREKVQA ETLL+ K+
Sbjct: 450 EDIKGEFHVMASALSKEMGMMESQLKRWKETGHEAVTVREKVQALETLLIEKK 502

[Close]

BLAST of Spg011271 vs. NCBI nr
Match: XP_023513145.1 (E3 ubiquitin-protein ligase BRE1-like 2 isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 93.6 bits (231), Expect = 5.0e-15
Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 203 EDIKGEFHVMASALSKEMGMMESQLKRWKETAHEAIFVREKVQARETLLVGKR 256
           EDIKGEFHVMASALSKEMGMMESQLKRWKET HEA+ VREKVQA ETLL+ K+
Sbjct: 59  EDIKGEFHVMASALSKEMGMMESQLKRWKETGHEAVTVREKVQALETLLIEKK 111

[Close]

BLAST of Spg011271 vs. ExPASy Swiss-Prot
Match: Q9C895 (E3 ubiquitin-protein ligase BRE1-like 2 OS=Arabidopsis thaliana OX=3702 GN=HUB2 PE=1 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 1.2e-08
Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 203 EDIKGEFHVMASALSKEMGMMESQLKRWKETAHEAIFVREKVQARETLLVGK 255
           +DIK EF  MAS LSKEM MME+QLKRWK+TA +A+++RE+ Q+    L  K
Sbjct: 470 QDIKSEFIAMASTLSKEMEMMEAQLKRWKDTAQDALYLREQAQSLRVSLSNK 521

[Close]

BLAST of Spg011271 vs. ExPASy Swiss-Prot
Match: A2ZAC2 (E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. indica OX=39946 GN=BRE1B PE=3 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 1.1e-04
Identity = 24/52 (46.15%), Postives = 36/52 (69.23%), Query Frame = 0


Query: 203 EDIKGEFHVMASALSKEMGMMESQLKRWKETAHEAIFVREKVQARETLLVGK 255
           +D K E HVMA++LSKEM ++++Q+ R K+ A EA+ +RE+     TLL  K
Sbjct: 414 KDFKDEIHVMAASLSKEMELLDNQMNRSKDAASEALALREEADYLRTLLAKK 465

[Close]

BLAST of Spg011271 vs. ExPASy Swiss-Prot
Match: Q336R3 (E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=HUB2 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.1e-04
Identity = 24/52 (46.15%), Postives = 36/52 (69.23%), Query Frame = 0


Query: 203 EDIKGEFHVMASALSKEMGMMESQLKRWKETAHEAIFVREKVQARETLLVGK 255
           +D K E HVMA++LSKEM ++++Q+ R K+ A EA+ +RE+     TLL  K
Sbjct: 414 KDFKDEIHVMAASLSKEMELLDNQMNRSKDAASEALALREEADYLRTLLAKK 465

[Close]

BLAST of Spg011271 vs. ExPASy TrEMBL
Match: A0A6J1FTK1 (E3 ubiquitin protein ligase OS=Cucurbita moschata OX=3662 GN=LOC111448344 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.4e-15
Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 203 EDIKGEFHVMASALSKEMGMMESQLKRWKETAHEAIFVREKVQARETLLVGKR 256
           EDIKGEFHVMASALSKEMGMMESQLKRWKET HEA+ VREKVQA ETLL+ K+
Sbjct: 450 EDIKGEFHVMASALSKEMGMMESQLKRWKETGHEAVTVREKVQALETLLIEKK 502

[Close]

BLAST of Spg011271 vs. ExPASy TrEMBL
Match: A0A6J1FX78 (E3 ubiquitin protein ligase OS=Cucurbita moschata OX=3662 GN=LOC111448344 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.4e-15
Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 203 EDIKGEFHVMASALSKEMGMMESQLKRWKETAHEAIFVREKVQARETLLVGKR 256
           EDIKGEFHVMASALSKEMGMMESQLKRWKET HEA+ VREKVQA ETLL+ K+
Sbjct: 450 EDIKGEFHVMASALSKEMGMMESQLKRWKETGHEAVTVREKVQALETLLIEKK 502

[Close]

BLAST of Spg011271 vs. ExPASy TrEMBL
Match: A0A6J1DII2 (E3 ubiquitin protein ligase OS=Momordica charantia OX=3673 GN=LOC111021228 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-14
Identity = 45/54 (83.33%), Postives = 49/54 (90.74%), Query Frame = 0


Query: 201 AIEDIKGEFHVMASALSKEMGMMESQLKRWKETAHEAIFVREKVQARETLLVGK 255
           A EDIK EFHVMASALSKEMGMME+Q+KRWKETAHEA+ +REKVQA ETLL GK
Sbjct: 262 AREDIKAEFHVMASALSKEMGMMEAQVKRWKETAHEAVSIREKVQALETLLSGK 315

[Close]

BLAST of Spg011271 vs. ExPASy TrEMBL
Match: A0A6J1DHV2 (E3 ubiquitin protein ligase OS=Momordica charantia OX=3673 GN=LOC111021228 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-14
Identity = 45/54 (83.33%), Postives = 49/54 (90.74%), Query Frame = 0


Query: 201 AIEDIKGEFHVMASALSKEMGMMESQLKRWKETAHEAIFVREKVQARETLLVGK 255
           A EDIK EFHVMASALSKEMGMME+Q+KRWKETAHEA+ +REKVQA ETLL GK
Sbjct: 448 AREDIKAEFHVMASALSKEMGMMEAQVKRWKETAHEAVSIREKVQALETLLSGK 501

[Close]

BLAST of Spg011271 vs. ExPASy TrEMBL
Match: A0A6J1DLS7 (E3 ubiquitin protein ligase OS=Momordica charantia OX=3673 GN=LOC111021228 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-14
Identity = 45/54 (83.33%), Postives = 49/54 (90.74%), Query Frame = 0


Query: 201 AIEDIKGEFHVMASALSKEMGMMESQLKRWKETAHEAIFVREKVQARETLLVGK 255
           A EDIK EFHVMASALSKEMGMME+Q+KRWKETAHEA+ +REKVQA ETLL GK
Sbjct: 319 AREDIKAEFHVMASALSKEMGMMEAQVKRWKETAHEAVSIREKVQALETLLSGK 372

[Close]

BLAST of Spg011271 vs. TAIR 10
Match: AT1G55250.1 (histone mono-ubiquitination 2 )

HSP 1 Score: 62.8 bits (151), Expect = 8.8e-10
Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 203 EDIKGEFHVMASALSKEMGMMESQLKRWKETAHEAIFVREKVQARETLLVGK 255
           +DIK EF  MAS LSKEM MME+QLKRWK+TA +A+++RE+ Q+    L  K
Sbjct: 470 QDIKSEFIAMASTLSKEMEMMEAQLKRWKDTAQDALYLREQAQSLRVSLSNK 521

[Close]

BLAST of Spg011271 vs. TAIR 10
Match: AT1G55250.3 (histone mono-ubiquitination 2 )

HSP 1 Score: 61.2 bits (147), Expect = 2.5e-09
Identity = 28/44 (63.64%), Postives = 37/44 (84.09%), Query Frame = 0


Query: 203 EDIKGEFHVMASALSKEMGMMESQLKRWKETAHEAIFVREKVQA 247
           +DIK EF  MAS LSKEM MME+QLKRWK+TA +A+++RE+ Q+
Sbjct: 451 QDIKSEFIAMASTLSKEMEMMEAQLKRWKDTAQDALYLREQAQS 494

The following BLAST results are available for this feature:

BLAST of Spg011271 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513144.1	5.0e-15	86.79	E3 ubiquitin-protein ligase BRE1-like 2 isoform X3 [Cucurbita pepo subsp. pepo]	[more]
KAG7010233.1	5.0e-15	86.79	E3 ubiquitin-protein ligase BRE1-like 2 [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_023513143.1	5.0e-15	86.79	E3 ubiquitin-protein ligase BRE1-like 2 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022943633.1	5.0e-15	86.79	E3 ubiquitin-protein ligase BRE1-like 2 isoform X2 [Cucurbita moschata]	[more]
XP_023513145.1	5.0e-15	86.79	E3 ubiquitin-protein ligase BRE1-like 2 isoform X4 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg011271 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C895	1.2e-08	57.69	E3 ubiquitin-protein ligase BRE1-like 2 OS=Arabidopsis thaliana OX=3702 GN=HUB2 ...	[more]
A2ZAC2	1.1e-04	46.15	E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. indica OX=39946 G...	[more]
Q336R3	1.1e-04	46.15	E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. japonica OX=39947...	[more]

BLAST of Spg011271 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTK1	2.4e-15	86.79	E3 ubiquitin protein ligase OS=Cucurbita moschata OX=3662 GN=LOC111448344 PE=3 S...	[more]
A0A6J1FX78	2.4e-15	86.79	E3 ubiquitin protein ligase OS=Cucurbita moschata OX=3662 GN=LOC111448344 PE=3 S...	[more]
A0A6J1DII2	1.6e-14	83.33	E3 ubiquitin protein ligase OS=Momordica charantia OX=3673 GN=LOC111021228 PE=3 ...	[more]
A0A6J1DHV2	1.6e-14	83.33	E3 ubiquitin protein ligase OS=Momordica charantia OX=3673 GN=LOC111021228 PE=3 ...	[more]
A0A6J1DLS7	1.6e-14	83.33	E3 ubiquitin protein ligase OS=Momordica charantia OX=3673 GN=LOC111021228 PE=3 ...	[more]

BLAST of Spg011271 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55250.1	8.8e-10	57.69	histone mono-ubiquitination 2	[more]
AT1G55250.3	2.5e-09	63.64	histone mono-ubiquitination 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 344..364
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 344..361
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg011271.1	Spg011271.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0010390	histone monoubiquitination
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity