Spg011243 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg011243
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold8: 24126747 .. 24128044 (-)
RNA-Seq ExpressionSpg011243
SyntenySpg011243
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGGAGGTACCCCGCCGTCGCCATCGGAAGCAAAAAGCCGACCGTGTCAAGGTAGTCCAGACTGATACCCCTTCACCGCCGACAACTGATTCTGAAAAAGAAAATGCAGAACGAGAAGAACAGGAGAAAAAGGAAGCCGAGGACAAAGCAAGAGAGGAAGCAGCGAAAAAGGCCGAGAAAGAGATTTTGCCCAAACAGAGGGAAGACAAGGGCAAAGGTATTGCTGAAGCATCGCCAGAGCCTGAGGATAGTGAAACAGAGGAGCCACGGTTACCATACAATCACTTCATCAACAATCTTGCCAGAGCAAAGTATGTCGAGATGCTAAAAAGAGACTTTTTGTTTGAGCGTGGGTTTAGCGATGATCTGCCATGGTTCTTGAGGACTGGAATAGGGAACCATGGCTGGAGTCAGTTCTGTGCAAAGCCGGAGCCGGTCAATTCCAACATTGTTTGAGAGTTTTATGCAAATATTGATGATCAAAAGGGATTTCAGGCTATCGTCCGAGGAGTACTCGTTGACTGGAGCCCTGGAGCTATCAATTCTTTATTCAACCTCCAGGACTTTCCGCACGTAGGCTTTAATGAGATGGTGGTAGCACCATCGAATGATCAATTGAATGCGGCTGTCCACGAGGTTGGCATCGAGGGGGCTCAGTGGAGACTGTCGAAGACAGAAAAGTGTACATTTCAAGCTGCTTATCTGAAGAGTGAGGCCAATACGTGGATGGGCTTCATCAAGCTACGCTTACTGCCGACAACTCACGATTCAACGGTGTCTCGGGACCGGGTATTGCTTGTTTTTGCTATTCTACGCTCGATGAGTATTGATGTGGGCAAAATAATTTCTTTTGAGATTTATGATTGCTGGTGGAAAAAGGTTGGGAAGCTGTTTTTCCCCATCACTACACGATGTTATGCCAAAGGGGAGGGGTTCCAGTGAATGATGATGATGTGACTCTGATAGACAAGGGAATAATTGACACACCAAATTTGGCCAGGCTTCAAAGGACACAGGAAGCACGCCAAGGAGGTTTGGTGTGCGGCATCCACCAAATGCAGGAGCAATTACAGATGCATTCCAGCAGGATGGAGTTTGCTGAAAGGCAATTCCAAACCTTCTGGAATTATGTGAAGAGGAGGGATGCTGCATTAAGGGGGGCCTTACAATCTAATTTTTCAAAACCATATCCGGCCTTCCCGATATTCCCTGATGATCTATTGAATCCATGGATCCCGCCGCTGCCTGTCGAGAGAGAAGGAGATGAAGAAGAAGATCCTGGTCAGGAGGATTGA

mRNA sequence

ATGCCGGAGGTACCCCGCCGTCGCCATCGGAAGCAAAAAGCCGACCGTGTCAAGGTAGTCCAGACTGATACCCCTTCACCGCCGACAACTGATTCTGAAAAAGAAAATGCAGAACGAGAAGAACAGGAGAAAAAGGAAGCCGAGGACAAAGCAAGAGAGGAAGCAGCGAAAAAGGCCGAGAAAGAGATTTTGCCCAAACAGAGGGAAGACAAGGGCAAAGGTATTGCTGAAGCATCGCCAGAGCCTGAGGATAGTGAAACAGAGGAGCCACGGTTACCATACAATCACTTCATCAACAATCTTGCCAGAGCAAAGTATGTCGAGATGCTAAAAAGAGACTTTTTGTTTGAGCGTGGGTTTAGCGATGATCTGCCATGGTTCTTGAGGACTGGAATAGGGAACCATGGCTGGAGTCAGTTCTGTGCAAAGCCGGAGCCGGCTATCGTCCGAGGAGTACTCGTTGACTGGAGCCCTGGAGCTATCAATTCTTTATTCAACCTCCAGGACTTTCCGCACGTAGGCTTTAATGAGATGGTGGTAGCACCATCGAATGATCAATTGAATGCGGCTGTCCACGAGGTTGGCATCGAGGGGGCTCAGTGGAGACTGTCGAAGACAGAAAAGTGTACATTTCAAGCTGCTTATCTGAAGAGTTGGGAAGCTGTTTTTCCCCATCACTACACGATGTTATGCCAAAGGGGAGGGGTTCCAGTGAATGATGATGATGTGACTCTGATAGACAAGGGAATAATTGACACACCAAATTTGGCCAGGCTTCAAAGGACACAGGAAGCACGCCAAGGAGGTTTGGTGTGCGGCATCCACCAAATGCAGGAGCAATTACAGATGCATTCCAGCAGGATGGAGTTTGCTGAAAGGCAATTCCAAACCTTCTGGAATTATGTGAAGAGGAGGGATGCTGCATTAAGGGGGGCCTTACAATCTAATTTTTCAAAACCATATCCGGCCTTCCCGATATTCCCTGATGATCTATTGAATCCATGGATCCCGCCGCTGCCTGTCGAGAGAGAAGGAGATGAAGAAGAAGATCCTGGTCAGGAGGATTGA

Coding sequence (CDS)

ATGCCGGAGGTACCCCGCCGTCGCCATCGGAAGCAAAAAGCCGACCGTGTCAAGGTAGTCCAGACTGATACCCCTTCACCGCCGACAACTGATTCTGAAAAAGAAAATGCAGAACGAGAAGAACAGGAGAAAAAGGAAGCCGAGGACAAAGCAAGAGAGGAAGCAGCGAAAAAGGCCGAGAAAGAGATTTTGCCCAAACAGAGGGAAGACAAGGGCAAAGGTATTGCTGAAGCATCGCCAGAGCCTGAGGATAGTGAAACAGAGGAGCCACGGTTACCATACAATCACTTCATCAACAATCTTGCCAGAGCAAAGTATGTCGAGATGCTAAAAAGAGACTTTTTGTTTGAGCGTGGGTTTAGCGATGATCTGCCATGGTTCTTGAGGACTGGAATAGGGAACCATGGCTGGAGTCAGTTCTGTGCAAAGCCGGAGCCGGCTATCGTCCGAGGAGTACTCGTTGACTGGAGCCCTGGAGCTATCAATTCTTTATTCAACCTCCAGGACTTTCCGCACGTAGGCTTTAATGAGATGGTGGTAGCACCATCGAATGATCAATTGAATGCGGCTGTCCACGAGGTTGGCATCGAGGGGGCTCAGTGGAGACTGTCGAAGACAGAAAAGTGTACATTTCAAGCTGCTTATCTGAAGAGTTGGGAAGCTGTTTTTCCCCATCACTACACGATGTTATGCCAAAGGGGAGGGGTTCCAGTGAATGATGATGATGTGACTCTGATAGACAAGGGAATAATTGACACACCAAATTTGGCCAGGCTTCAAAGGACACAGGAAGCACGCCAAGGAGGTTTGGTGTGCGGCATCCACCAAATGCAGGAGCAATTACAGATGCATTCCAGCAGGATGGAGTTTGCTGAAAGGCAATTCCAAACCTTCTGGAATTATGTGAAGAGGAGGGATGCTGCATTAAGGGGGGCCTTACAATCTAATTTTTCAAAACCATATCCGGCCTTCCCGATATTCCCTGATGATCTATTGAATCCATGGATCCCGCCGCTGCCTGTCGAGAGAGAAGGAGATGAAGAAGAAGATCCTGGTCAGGAGGATTGA

Protein sequence

MPEVPRRRHRKQKADRVKVVQTDTPSPPTTDSEKENAEREEQEKKEAEDKAREEAAKKAEKEILPKQREDKGKGIAEASPEPEDSETEEPRLPYNHFINNLARAKYVEMLKRDFLFERGFSDDLPWFLRTGIGNHGWSQFCAKPEPAIVRGVLVDWSPGAINSLFNLQDFPHVGFNEMVVAPSNDQLNAAVHEVGIEGAQWRLSKTEKCTFQAAYLKSWEAVFPHHYTMLCQRGGVPVNDDDVTLIDKGIIDTPNLARLQRTQEARQGGLVCGIHQMQEQLQMHSSRMEFAERQFQTFWNYVKRRDAALRGALQSNFSKPYPAFPIFPDDLLNPWIPPLPVEREGDEEEDPGQED
Homology
BLAST of Spg011243 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 80.9 bits (198), Expect = 2.5e-11
Identity = 96/391 (24.55%), Postives = 139/391 (35.55%), Query Frame = 0

Query: 73  KGIAEASPEPEDSETEEPRLPYNHFINNLARAKYVEMLKRDFLFERGFSDD-------LP 132
           K +A  + +    ETE     Y + I N           R    E+GF  D       LP
Sbjct: 13  KRVARKAHKAVKFETEAAATRYENNIQN-----------RPLNAEKGFVLDNSETMGQLP 72

Query: 133 WFLRTGIGNHGWSQFCAKPEPAI--------------------VRGVLVDWSPGAINSLF 192
            F+   I  H W QFCA PE  I                    VRGV V WS  AIN++F
Sbjct: 73  -FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVF 132

Query: 193 NLQDFPHVGFNEMVVAPSNDQLNAAVHEVGIEGAQWRLSKTEKCTF-------------- 252
            L D P    +E +   +   L   +  V   GA+W +S     T               
Sbjct: 133 GLGD-PVDEHSEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYH 192

Query: 253 -------------------------------------------QAAYLKSWEAVFPHHYT 312
                                                        A  K+    FP   T
Sbjct: 193 FLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLIT 252

Query: 313 MLCQRGGVPVNDDDVTLIDKGIIDTPNLARLQR---TQEARQ---------------GGL 355
            LC+    P   ++  L + G ID   +AR+ +   T+  +Q               G +
Sbjct: 253 RLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDI 312

BLAST of Spg011243 vs. NCBI nr
Match: EXB77427.1 (hypothetical protein L484_000483 [Morus notabilis])

HSP 1 Score: 75.1 bits (183), Expect = 1.4e-09
Identity = 49/183 (26.78%), Postives = 83/183 (45.36%), Query Frame = 0

Query: 66  KQREDKGKGI--------AEASPEPEDSETEEPRLPYNHFINNLARAKYVEMLKRDFLFE 125
           K +  KGKG+        +E+ P  E++E ++   P      +    K    ++R F++ 
Sbjct: 4   KSKARKGKGVRILIDSDSSESDPATENAEVKKFASPEAEHRFDTCMNKRALHMERGFVYR 63

Query: 126 RGFSDDLPWFLRTGIGNHGWSQFC---------------AKPEPAIVRGVLVDWSPGAIN 185
           RG     P F+ + I  H W  FC               A+P+   VRG L+ ++  AIN
Sbjct: 64  RGRPSGYPSFIHSVIAAHKWHSFCHNPHAATVQLVREYAAEPDTIFVRGQLIPFTSEAIN 123

Query: 186 SLFNLQDFPHVGFNEMVVAPSNDQLNAAVHEVGIEGAQWRLSKTEKCTFQAAYLKSWEAV 226
           SL++L D     FN    + + DQL+  ++E+ +EG +WR +     TF    L+    +
Sbjct: 124 SLYDLPDVED-HFNNFADSLNEDQLDEVINELCVEGTEWRRATRGSMTFPRECLQPGSKI 183

BLAST of Spg011243 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-06
Identity = 47/152 (30.92%), Postives = 68/152 (44.74%), Query Frame = 0

Query: 217 KSWEAVFPHHYTMLCQRGGVPVNDDDVTLIDKGIIDTPNLARL--------------QRT 276
           K+    FP   T LC+     VN++   L + G ID   +AR+               R 
Sbjct: 158 KTGALFFPSLITRLCRNAPFLVNEE--KLHNTGEIDAIAVARITQEGPTESTQQPSSSRP 217

Query: 277 QEARQGGLVCGIHQMQEQLQMHSSRMEFAERQFQTFWNYVKRRDAALRGALQSNFSKPYP 336
             A        + Q  + L+   S+ E   +Q Q FW Y K RD AL+ ALQ+NF++P P
Sbjct: 218 AAASSSRTNGDVLQQLKALEQRLSQQEHTHKQQQQFWAYSKERDTALKKALQNNFTRPIP 277

Query: 337 AFPIFPDDLLNPWIPPLPVEREGDEEEDPGQE 355
            FP FP ++L      L  E E + ++D   E
Sbjct: 278 TFPAFPQEILQ----DLDYEYEAESDKDGSNE 303

BLAST of Spg011243 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii])

HSP 1 Score: 61.2 bits (147), Expect = 2.0e-05
Identity = 50/165 (30.30%), Postives = 74/165 (44.85%), Query Frame = 0

Query: 217 KSWEAVFPHHYTMLCQRGGVPVNDDDVTLIDKGIIDTPNLARLQRTQEAR---------- 276
           KS    FP   T LC+    P   ++  L   G ID   +AR+  TQE +          
Sbjct: 99  KSGALFFPSLITQLCRNARAPFLVNEEKLHITGEIDAIAVARI--TQEGQTELTQQPSTS 158

Query: 277 ----------QGGLVCGIHQMQEQL------QMH-SSRMEFAERQFQTFWNYVKRRDAAL 336
                      G ++  +  ++++L      Q H  S ++   +Q Q FW Y K RD AL
Sbjct: 159 RPTVASSSRANGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTAL 218

Query: 337 RGALQSNFSKPYPAFPIFPDDLLNPWIPPLPVEREGDEEEDPGQE 355
           + ALQ+NF++P P FP FP +LL      L  E E + ++D   E
Sbjct: 219 KKALQNNFTRPIPTFPTFPQELLQ----DLDYEYEAESDKDGSNE 257

BLAST of Spg011243 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-11
Identity = 96/391 (24.55%), Postives = 139/391 (35.55%), Query Frame = 0

Query: 73  KGIAEASPEPEDSETEEPRLPYNHFINNLARAKYVEMLKRDFLFERGFSDD-------LP 132
           K +A  + +    ETE     Y + I N           R    E+GF  D       LP
Sbjct: 13  KRVARKAHKAVKFETEAAATRYENNIQN-----------RPLNAEKGFVLDNSETMGQLP 72

Query: 133 WFLRTGIGNHGWSQFCAKPEPAI--------------------VRGVLVDWSPGAINSLF 192
            F+   I  H W QFCA PE  I                    VRGV V WS  AIN++F
Sbjct: 73  -FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVF 132

Query: 193 NLQDFPHVGFNEMVVAPSNDQLNAAVHEVGIEGAQWRLSKTEKCTF-------------- 252
            L D P    +E +   +   L   +  V   GA+W +S     T               
Sbjct: 133 GLGD-PVDEHSEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYH 192

Query: 253 -------------------------------------------QAAYLKSWEAVFPHHYT 312
                                                        A  K+    FP   T
Sbjct: 193 FLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLIT 252

Query: 313 MLCQRGGVPVNDDDVTLIDKGIIDTPNLARLQR---TQEARQ---------------GGL 355
            LC+    P   ++  L + G ID   +AR+ +   T+  +Q               G +
Sbjct: 253 RLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDI 312

BLAST of Spg011243 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-06
Identity = 47/152 (30.92%), Postives = 68/152 (44.74%), Query Frame = 0

Query: 217 KSWEAVFPHHYTMLCQRGGVPVNDDDVTLIDKGIIDTPNLARL--------------QRT 276
           K+    FP   T LC+     VN++   L + G ID   +AR+               R 
Sbjct: 158 KTGALFFPSLITRLCRNAPFLVNEE--KLHNTGEIDAIAVARITQEGPTESTQQPSSSRP 217

Query: 277 QEARQGGLVCGIHQMQEQLQMHSSRMEFAERQFQTFWNYVKRRDAALRGALQSNFSKPYP 336
             A        + Q  + L+   S+ E   +Q Q FW Y K RD AL+ ALQ+NF++P P
Sbjct: 218 AAASSSRTNGDVLQQLKALEQRLSQQEHTHKQQQQFWAYSKERDTALKKALQNNFTRPIP 277

Query: 337 AFPIFPDDLLNPWIPPLPVEREGDEEEDPGQE 355
            FP FP ++L      L  E E + ++D   E
Sbjct: 278 TFPAFPQEILQ----DLDYEYEAESDKDGSNE 303

BLAST of Spg011243 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.9e-06
Identity = 50/165 (30.30%), Postives = 74/165 (44.85%), Query Frame = 0

Query: 217 KSWEAVFPHHYTMLCQRGGVPVNDDDVTLIDKGIIDTPNLARLQRTQEAR---------- 276
           KS    FP   T LC+    P   ++  L   G ID   +AR+  TQE +          
Sbjct: 99  KSGALFFPSLITQLCRNARAPFLVNEEKLHITGEIDAIAVARI--TQEGQTELTQQPSTS 158

Query: 277 ----------QGGLVCGIHQMQEQL------QMH-SSRMEFAERQFQTFWNYVKRRDAAL 336
                      G ++  +  ++++L      Q H  S ++   +Q Q FW Y K RD AL
Sbjct: 159 RPTVASSSRANGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTAL 218

Query: 337 RGALQSNFSKPYPAFPIFPDDLLNPWIPPLPVEREGDEEEDPGQE 355
           + ALQ+NF++P P FP FP +LL      L  E E + ++D   E
Sbjct: 219 KKALQNNFTRPIPTFPTFPQELLQ----DLDYEYEAESDKDGSNE 257

BLAST of Spg011243 vs. ExPASy TrEMBL
Match: A0A2P5ELY2 (Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_176260 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 9.2e-04
Identity = 29/69 (42.03%), Postives = 40/69 (57.97%), Query Frame = 0

Query: 286 SRMEFAERQFQTFWNYVKRRDAALRGALQSNFSKPYPAFPIFPDDLLNPWIPPLPVEREG 345
           S ++   +Q Q FW Y K RD AL+ ALQ+NF++P P FP FP +LL      L  E E 
Sbjct: 2   SLLQQTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPTFPQELLQ----DLDYEYEA 61

Query: 346 DEEEDPGQE 355
           + ++D   E
Sbjct: 62  ESDKDGSNE 66

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PON46472.12.5e-1124.55hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii][more]
EXB77427.11.4e-0926.78hypothetical protein L484_000483 [Morus notabilis][more]
PON78020.13.1e-0630.92hypothetical protein PanWU01x14_023740 [Parasponia andersonii][more]
PON59596.12.0e-0530.30hypothetical protein PanWU01x14_158080 [Parasponia andersonii][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P5BCG41.2e-1124.55Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5DXM31.5e-0630.92Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE... [more]
A0A2P5CEY29.9e-0630.30Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE... [more]
A0A2P5ELY29.2e-0442.03Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_176... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 30..64
NoneNo IPR availableCOILSCoilCoilcoord: 274..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg011243.1Spg011243.1mRNA