Spg011199 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg011199
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDDE Tnp4 domain-containing protein
Locationscaffold5: 7835804 .. 7841818 (+)
RNA-Seq ExpressionSpg011199
SyntenySpg011199
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCACATCTAAGAGAAGTAGATGAGTGTTCCCTAAAGTGGTGACTCCGGGACTTGAACAAAGGGATCCCGCCCTCTCACTGGCCCGAGAGGGACTTTCTGTTTAATGGTTGGACCATAAACAGGTTGTTCATTATAGGAGCACTGGTACTTAAGGAGACAGATGTAACACAAGGGTAAAACGGTAATTTGACCCAGCCGTGATTACGAACACTCGTGGAGGATTGACTTACCGGCATATGTCTACATCCATGGACACAGAAATGTTCTACAGTGAGAAGAGTTCAGCTGTGGGTCTTTAGTGGAATGACCCACAGTTAATGAATATTGGTTAACCTGATTAATGAGTTTAATCTATTAACCTCATATCATTGGAGCTTCTGATCTGTAGGTCCATTAGGTCCCCCTGCTAGCTCGTAAAGAGTAATTAGGAACAAATATATCTTGAGAGAATTTGAATAGTTCAAATTCATATTGGGAATTAAGTTAATTGTACGAGATACAAATTAATATAATGTATAGTGATGCATTAAAATATAAAGTTTAATTTTAGATTAAACTTTATTATATTGAGAGATTGATATATTTGAAAGAGTTCAAATATATGTCTAATTAAATATATGGTATTTAATTAGAAGATAAATTAATTAATTATGAATTAATTAATTATTCAATTTAGTTTAAATTAAATGAGATTTAATTAAACTATAGTCTATGAGAGAAATAAATATTTGAAGAAGTTCAAATATTAATATGAATTTGATTCATATTAAATTTATAGGATATAAGAGAATTTGAAGGAGTTCAAATTTTAATATGAATTTGATTCATATTATAGAATTAATTAATTGAAGGTCTCAAATTAAATATATGATATTTAATTGGATAATTAATTAATTAACTAATAGAAGGTCTGAAATTAAATATATGATATTTAATTGGTGATTAATTAATTAAAGAATTAATTAATTGGAAATTAATCAATTATGAAAATGATTAATCACTTATGGAAGTAATTAATCATTTATGGAAATGATTTAATCACTTATGGAAGTGATCAATCATTTATGGAAAAGATTAATCAATTATGGAATTGGTTGGTTATGGAATTGATTAATTATGGAAAAGATTAAATCAATTATGGAAATAATTGATTTTAAATGAATATTTTATTCATGGCCTTTCTCCTATAAATAGAACACTAAACCTAGGGTTTAAGTACAACAACATAAGGCCACAAGAATGCACTCTTGCATTCTCTCTAGCCTCCCTCTCATATTCTCTCAACTCAGGAACTTTGGGGAGAATTTTCTCTCTAGAGTTTTTCCCATTCAAGATTAGGTAGTCCCACAACTACGTTCCTAATCTCAGAGTTATAGCGGGGAAGATCAAATGGTGGTGTTCTTCGTTGTTGCAGAACAATCAAGAATCATCCGTTGAAGTATTCAGAGTCGTCAACGGAGGTTTGCTTCTCTTTTCTTTATTATAGATTTAGATCTAAATTTTGTATGCTTAGCCTTAAGTTTCTATAGAATTTGTTCTATGTTTTAACCAATGCAATAGTATTTTTGGATAAACAAAATTAACTACGAATCGGTCCCAATTACGCTTCCGCTTTAACGGAATTGGGGAATTCCAAATCCTTTCAGGGGGGGGGCGCTGCTACACGAAGAACAAAATGGGAAGAAAAATCGAGGGGGGCGGGGCGCTGCTACACAAAGAATAAAATGGGAAAATCACCTCCGGCGTGAGCTTCAACGTCGTCATCAATGGGAAGAAGAAGATCGAGGGGAGGGCGCTGCTACACGAATGGAGAATGGGAAGAAAAATCGATGGGCGGCGCTGCTACACGAAGAAGAAAAGGGGGCTGCTACACAGAGAAGAAAATGGGAAGAAAAGTGTGGGCTAGGGTTTATTTTTGTCGTGGTTTTAGCCGACGCAAATTGCGTCGGCTAAAGTCCCAAAACGCAAAATTTTTCTGCGTTTTAATAAATAGGTATTAGTCGACGCAACTTGCGTCGGCTTATACCCGAGCCCAATTTACCTCCGACGCGGCCCAGTTTCGTCGGAGGAAAGGCCCAATAACCGACGTATTTTGTTGCGTCGGCGAAAAGAAACGTCGGCCTAGCCTAAAATTCTTGTAGTGTCAGAGTCATATCGGTGTAGCCATAGTGGTGGTGTTCACACTAGTTCGTGATTAATTCACAAGCAGTTGGTGAATTTAATCTGAGTCGTCAACGAGAGTAAGTAATTTGTTACTTTATAAATTAGATTTAGATCTAATATTTTTGTATGCTTAGCCTTAATATATATTTAGAATAGTTCTAATATTATTGCCAATGTATTGGTATTTTAGATTAAACAAAATTAATTACGAATCGGTCCCAATCACGCTTCCGCTTTACGGAATTACGGAATTCCAATCCTTCAGTTGAATCCGACGAACGATCTGTTACCGCCACCGTCTTCTCCGACCAATTCATCCATTTCCTCCTCCGATCTTGACACTGAGGTGCCCACCTTCGCCTTCTCCCATTTTCTGATTCTGATTCTCTATCTGTTTTTTATTTTGGGAATTCAATTCTGTTTTGCAGTCGACAGGTTTGTTCTTCCATGACAGGAGCACGAGCTTGGGGGCTCTAATGGGGGTGAGCTTCTCGGCGATTACCTTCTGAGTGCCCTCACAGAACCGAGACCAACACGCCGCCGCGAACGCCTCCGTCGCAGGTGGCAGGGGCGGTTCCCGAAAGAGCAAGAAGCCGAAGAGAAAAACGACGACGGCGCCGACACTGGTCGCAGATCGGAAGCGGAGGTGGTGGCGGCTGTGCAGGGACGACGGCGTTAAGCCGACATCTCTCGATGATTTTCTCGAGGTGGAACGGAGATTTGAGGACGGTGCTTTTTATGGCAACGCAGTGGATCTGGAAGGCGTGGTTGCGGTGGATCAACAAAGGAATGGGCGGAATTTGTTCGCCGACGGGAGAGTTCTACCGCCGGCGCAAACAGAGGAAGAAGCCTCGGCGGCGGGGCTCTATGCCGATTTTCCGTATCCCTCATCGGAATTTGCAGCGGCGGTGCCGGCTAAAATGTGGGATTTGATTTGTCCAGTTTATTTTAAAATATATCATATTTAATCAATCAAATGCTTTTAATTAATGTGGATGAAAAAAAGAAAAAAAAATGTCACCTTTATTGTGTAGGTAACCCTAAACCCTAAAAAAAAAAAAAGTCTCCGGCGAGCGGTGGTCACCGGCCGCTGGCGACCTGCTGAAGAAGAAGGGAAGAAGAAAAGGTTGAGATGAGAGGAAGAAGGTTGAAAGAAGAAGATGAATAAGAGAGAGAGATAGAAAAAAATAAATAATAATAATAAAATAATAAAATATTATTATTTAATATTTTTTATTTTAAAAATTTTAAAAATATTTTTTTTATTAAAATAATAGTGCCACGTCAGCAACGGTTAAAATTTAACAGAAAAGTTGACGGCAGGGACCAAAGTGCTCCTTATCTCAAACCTCAGGGGTATTTTTGTTGAGTTTGAAAACTCAGGGACCAAAGTGTCACTTAACCCAAACCTCAGGGACCAAAAGTGTGTTTTTCCCTATCTTCAAATATTTGATGGTTTTTTATTGTTGCTAAGAACTTTGTGAGAGTTTTTTTCTTCGTTTACGATTTTTTTTCATGCTAATTAGAAGTATGTACAAATGTAGAAAACGAAAATAAAGAAATTTTGAGTTTTTTATTTCTCATATTTGCTGGATTTTTCTTGTTGCTAATAACTTTGTGATTCTTTTTTGGATAATAATGGGAAGAATAGTATGGTATATTTGATTTCTTCTGGTTTTTCCAAAAAATTTCTTACAAAACACTAACTCAGGTGCAATGTGAATTAAAAAAAAGGAAAAAGAAATTGTCAATTACATGTTTTAATAGCAATTCAAATGAAAAGTTGACCCAAAGGTCTACATTGCAACATTTATGCAAGTTTGAGGTTCAAATTGATACAATTTATTAAGTTTAGGGTTCAATTTGATGAAATTGAAAGTTTAGGGTTAAAATTGATACAACTTGCTAAGTTTAGGGGTCCAAATTGATTTTTTCCCCTAATTAAAACCTAGGGCAGATCTAGAGCTTAAGTTTTGGAAGGACAAAAATATAAATCACATTTTGATATTTGTTTCATTGGTCTCTAAGTTTACAAACAATCTATTTTAACTCCTAAACTTGAAAAAAGAAGAGTTATTTTGGTCTTAAACTTTTAAAATGTCTAATTTAATAATCTCTAAATTCTTTTTAAAAATAATCATTTTGGTTTTTGTAGTCATTGTTCTATAACACCTAAAATCAGGCCACCCGCCCAATATCTGCTTTAACCAACTTATAAAACCCCACTATATGTCCATGCATGTTTCTCGCAGTTCCTTTGTATGTTTCTCACATAGGACTCAATAAAGTATCATCTTTTCTAAAAAAAAAGTATACGTCCATCTCACTACATGAACCATTCATGCACATATTTAAATTAGTCAAGTGATTTGTAAACTAATAAAAAAAACTATGAGAATAAAATTCATTTTTTTTAAAAAATAAAACTAAAATAGACATTTTAAAAGTTCATGGATGAAAAGGAATAAGCCTACAAATTTAGAAACCAAAATATTTAGGCCCCGTTTGATAACCATTTCTGTTATAGGTAATTTTGGACCACTCCGATGTACAAGGAGCTGGCGAGGACAACCCGACAAGAGCCCAGAAGTAGGACTGGAAAATGGACTCCGGAGGCGAAACGGGCCAAAAGGTCGGAGGGACCGGGCCTTGGCCCGACCCATATGGTTGGCCTCGGCCCGAGGTCGAGGTCAACCATGGGTCGAGTCCTTCCGCCTCCGTTCGGTCCCTGCTGCCCCTGGCCTTCCCGGTTCCACCTGGTCAGGGGCGGATTTATGTAGGGGCCAGAAATCATAAATTATATATTTATGTATAATTTGTTTCATTCAAATTAATTTATTATTGTCATGGTTTGTTGGTCAGTGAGGGCACAAAAAAAAACGATTCTGCTTGGTGATTCCTTGTTCAATTCTATGGTAGTACATGATTTTGTACAACGGTTTTTTTGGGCGAAGGCTACTCCGTTCGATTCTTGGTTAACGCACTTCTGTAATTAATCTTAGTAAATTATTTTAAAGAAATTAATAGCATAAAAAATCTTAATTCTATTTAAAATTTAAAGTTTCCAAGATAATTCTACCAATTAGAAGTTTAGTTTTTGAATTTTATAATTTTTGTTTAATAGGTTATTAAACTTTCAATTTTGTGTCTTGTAAGTCCTTTAAACTTTGAAAATGTCTAATAGATCTATGAAATTTTGGTTTTTTTTTTTATCTAATAGATCTTAAATATATTTTGAAAAAAGTAAATTAATTGCTCTATTAGACATGAAATTTAATTTTGTATCTATTTGAACCTTAACTTCCAATTTTGTAGCCAATAAATACATTAATTTTAGAAAATGTCAAATAAATTGAGAAATTATTAGATACAACATTAAAATTTATGTCTAATATAACATTTAATTTTTAATATTTTGAATATGTCAAAATCCAATTATATACAAAATTAAACTTCACATATGAATATTAGAAAAAAAAAATAAAGAAATTATTAGGGATTTATTAGACCGAAATCTAAAATTTCAGGAACTAAACTTGTAATTTCAACCAATTTGAAGTTGTGCCCCCCCTAGCAACAAGTTCTGGATCCGCCACTGCACCTGGTTCAGCCCGAATCGCCTTCGAATGCCTAAAAACCCTAGAGCAGGAACAGATATTTAAACCCTTCTTCATCACTGCAGAAAGGATCCCGAACTCTACTCTCAATTCTCTCTTCTTGCTCTCCTCCTTCCGCTTTCTGACTTAA

mRNA sequence

ATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCACATCTAAGAGAAGTAGATGAGTGTCCATTAGGTCCCCCTGCTAGCTCGGGGGGGGCGCTGCTACACGAAGAACAAAATGGGAAGAAAAATCGAGGGGGGCGGGGCGCTGCTACACAAAGAATAAAATGGGAAAATCACCTCCGGCGTGAGCTTCAACGTCGTCATCAATGGGAAGAAGAAGATCGAGGGGAGGGCGCTGCTACACGAATGGAGAATGGGAAGAAAAATCGATGGGCGGCGCTGCTACACGAAGAAGAAAAGGGGGCTGCTACACAGAGAAGAAAATGGGAAGAAAAGTGTGGGCTAGGTCGACAGAACCGAGACCAACACGCCGCCGCGAACGCCTCCGTCGCAGGTGGCAGGGGCGGTTCCCGAAAGAGCAAGAAGCCGAAGAGAAAAACGACGACGGCGCCGACACTGGTCGCAGATCGGAAGCGGAGGTGGTGGCGGCTGTGCAGGGACGACGGCGTTAAGCCGACATCTCTCGATGATTTTCTCGAGGTGGAACGGAGATTTGAGGACGGTGCTTTTTATGGCAACGCAGTGGATCTGGAAGGCGTGGTTGCGGTGGATCAACAAAGGAATGGGCGGAATTTGTTCGCCGACGGGAGAGTTCTACCGCCGGCGCAAACAGAGGAAGAAGCCTCGGCGGCGGGGCTCTATGCCGATTTTCCGAGCTGGCGAGGACAACCCGACAAGAGCCCAGAAGTAGGACTGGAAAATGGACTCCGGAGGCGAAACGGGCCAAAAGGTCGGAGGGACCGGGCCTTGGCCCGACCCATATGGTTGGCCTCGGCCCGAGGTCGAGGTCAACCATGGGTCGAGTCCTTCCGCCTCCGTTCGGTCCCTGCTGCCCCTGGCCTTCCCGGTTCCACCTGGTCAGGGGCGGATTTATTTGTGCCCCCCCTAGCAACAAGTTCTGGATCCGCCACTGCACCTGGTTCAGCCCGAATCGCCTTCGAATGCCTAAAAACCCTAGAGCAGGAACAGATATTTAAACCCTTCTTCATCACTGCAGAAAGGATCCCGAACTCTACTCTCAATTCTCTCTTCTTGCTCTCCTCCTTCCGCTTTCTGACTTAA

Coding sequence (CDS)

ATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCACATCTAAGAGAAGTAGATGAGTGTCCATTAGGTCCCCCTGCTAGCTCGGGGGGGGCGCTGCTACACGAAGAACAAAATGGGAAGAAAAATCGAGGGGGGCGGGGCGCTGCTACACAAAGAATAAAATGGGAAAATCACCTCCGGCGTGAGCTTCAACGTCGTCATCAATGGGAAGAAGAAGATCGAGGGGAGGGCGCTGCTACACGAATGGAGAATGGGAAGAAAAATCGATGGGCGGCGCTGCTACACGAAGAAGAAAAGGGGGCTGCTACACAGAGAAGAAAATGGGAAGAAAAGTGTGGGCTAGGTCGACAGAACCGAGACCAACACGCCGCCGCGAACGCCTCCGTCGCAGGTGGCAGGGGCGGTTCCCGAAAGAGCAAGAAGCCGAAGAGAAAAACGACGACGGCGCCGACACTGGTCGCAGATCGGAAGCGGAGGTGGTGGCGGCTGTGCAGGGACGACGGCGTTAAGCCGACATCTCTCGATGATTTTCTCGAGGTGGAACGGAGATTTGAGGACGGTGCTTTTTATGGCAACGCAGTGGATCTGGAAGGCGTGGTTGCGGTGGATCAACAAAGGAATGGGCGGAATTTGTTCGCCGACGGGAGAGTTCTACCGCCGGCGCAAACAGAGGAAGAAGCCTCGGCGGCGGGGCTCTATGCCGATTTTCCGAGCTGGCGAGGACAACCCGACAAGAGCCCAGAAGTAGGACTGGAAAATGGACTCCGGAGGCGAAACGGGCCAAAAGGTCGGAGGGACCGGGCCTTGGCCCGACCCATATGGTTGGCCTCGGCCCGAGGTCGAGGTCAACCATGGGTCGAGTCCTTCCGCCTCCGTTCGGTCCCTGCTGCCCCTGGCCTTCCCGGTTCCACCTGGTCAGGGGCGGATTTATTTGTGCCCCCCCTAGCAACAAGTTCTGGATCCGCCACTGCACCTGGTTCAGCCCGAATCGCCTTCGAATGCCTAAAAACCCTAGAGCAGGAACAGATATTTAAACCCTTCTTCATCACTGCAGAAAGGATCCCGAACTCTACTCTCAATTCTCTCTTCTTGCTCTCCTCCTTCCGCTTTCTGACTTAA

Protein sequence

MGESGQYADSICLLFGDKTEWEAGDMTTQEGIHSFPHLREVDECPLGPPASSGGALLHEEQNGKKNRGGRGAATQRIKWENHLRRELQRRHQWEEEDRGEGAATRMENGKKNRWAALLHEEEKGAATQRRKWEEKCGLGRQNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGRVLPPAQTEEEASAAGLYADFPSWRGQPDKSPEVGLENGLRRRNGPKGRRDRALARPIWLASARGRGQPWVESFRLRSVPAAPGLPGSTWSGADLFVPPLATSSGSATAPGSARIAFECLKTLEQEQIFKPFFITAERIPNSTLNSLFLLSSFRFLT
Homology
[Close]
BLAST of Spg011199 vs. NCBI nr
Match: XP_022924210.1 (uncharacterized protein At3g17950 [Cucurbita moschata] >XP_022924211.1 uncharacterized protein At3g17950 [Cucurbita moschata])

HSP 1 Score: 194.1 bits (492), Expect = 2.2e-45
Identity = 97/120 (80.83%), Postives = 103/120 (85.83%), Query Frame = 0 

Query: 141 QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDD 200
           QNRDQHAAA A+     GGSRKSKKPKRKTT AP LVADRKRRWWRLCRDDGVKP SL +
Sbjct: 59  QNRDQHAAATAAAG---GGSRKSKKPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGE 118

Query: 201 FLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGRVLPPAQTEEEASAAGLYADF 260
           FLEVERRF DGAF+GNAVDLEGVV+ DQQRNGR+LFADGRVLPPAQTEE+ SAAG    F
Sbjct: 119 FLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRF 175

[Close]
BLAST of Spg011199 vs. NCBI nr
Match: KAG6584313.1 (hypothetical protein SDJN03_20245, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019905.1 hypothetical protein SDJN02_18872 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 193.0 bits (489), Expect = 5.0e-45
Identity = 96/120 (80.00%), Postives = 103/120 (85.83%), Query Frame = 0 

Query: 141 QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDD 200
           QNRDQHAAA A+     GGSRKSKKPKRKTT AP LVADRKRRWWRLCRDDGVKP SL +
Sbjct: 59  QNRDQHAAATAAAG---GGSRKSKKPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGE 118

Query: 201 FLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGRVLPPAQTEEEASAAGLYADF 260
           FLEVERRF DGAF+GNAVDLEGVV+ DQQRNGR+LFADGRVLPPAQT+E+ SAAG    F
Sbjct: 119 FLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTDEDTSAAGALCRF 175

[Close]
BLAST of Spg011199 vs. NCBI nr
Match: XP_023520118.1 (uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo] >XP_023520119.1 uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.0 bits (489), Expect = 5.0e-45
Identity = 96/120 (80.00%), Postives = 103/120 (85.83%), Query Frame = 0 

Query: 141 QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDD 200
           QNRDQH+AA A+     GGSRKSKKPKRKTT AP LVADRKRRWWRLCRDDGVKP SL +
Sbjct: 59  QNRDQHSAATAAAG---GGSRKSKKPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGE 118

Query: 201 FLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGRVLPPAQTEEEASAAGLYADF 260
           FLEVERRF DGAF+GNAVDLEGVV+ DQQRNGR+LFADGRVLPPAQTEE+ SAAG    F
Sbjct: 119 FLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRF 175

[Close]
BLAST of Spg011199 vs. NCBI nr
Match: XP_038895169.1 (uncharacterized protein At3g17950 [Benincasa hispida])

HSP 1 Score: 190.3 bits (482), Expect = 3.2e-44
Identity = 95/120 (79.17%), Postives = 102/120 (85.00%), Query Frame = 0 

Query: 141 QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDD 200
           QNRDQH AA A+     GGSRKSKK KRKT+TAP LVADRKRRWWRLCRDDGVKP SL +
Sbjct: 59  QNRDQHTAATAAAG---GGSRKSKKTKRKTSTAPALVADRKRRWWRLCRDDGVKPASLGE 118

Query: 201 FLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGRVLPPAQTEEEASAAGLYADF 260
           FLEVERRF DGAFYGNAVDLEGVVA DQQRNGR+LFADGRVLPPA+TE++ SAAG    F
Sbjct: 119 FLEVERRFGDGAFYGNAVDLEGVVATDQQRNGRSLFADGRVLPPAETEDDTSAAGALCRF 175

[Close]
BLAST of Spg011199 vs. NCBI nr
Match: XP_016899568.1 (PREDICTED: uncharacterized protein At3g17950 isoform X2 [Cucumis melo] >XP_016899571.1 PREDICTED: uncharacterized protein At3g17950 isoform X2 [Cucumis melo])

HSP 1 Score: 189.5 bits (480), Expect = 5.5e-44
Identity = 95/120 (79.17%), Postives = 99/120 (82.50%), Query Frame = 0 

Query: 141 QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDD 200
           QNRDQH AA  +     GGSRKSKK KRKTTTAP LVADRKRRWWRLCRDDGVKP SL +
Sbjct: 59  QNRDQHTAATVTAG---GGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGE 118

Query: 201 FLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGRVLPPAQTEEEASAAGLYADF 260
           FLEVERRF DGAFYGNAVDLEGVV  DQQRNGR+LFADGRVLPPAQTEE+ SA G    F
Sbjct: 119 FLEVERRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRF 175

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BLAST of Spg011199 vs. ExPASy Swiss-Prot
Match: Q6DR24 (Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 5.4e-10
Identity = 48/130 (36.92%), Postives = 69/130 (53.08%), Query Frame = 0 

Query: 140 RQNRDQHAAANASVA-GGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDD------- 199
           R +  +H + + +++      +R++ + KR  + +      R+R+WWR CRDD       
Sbjct: 53  RASSRRHVSPSVAISRASSSNARRNHQRKRPPSNSAEPEPHRRRKWWRFCRDDDDDAAGN 112

Query: 200 GV-------KPTSLDDFLEVERRFEDGAFYGNA-VDLEGVVAV---DQQ--RNGRNLFAD 249
           G+       K +SL ++LEVERRF D A Y +A  +LE  V     DQQ     R LFAD
Sbjct: 113 GIHRGTGDSKRSSLGEYLEVERRFGDEAVYNSAEAELEDAVVARYQDQQPVMGERALFAD 172

[Close]
BLAST of Spg011199 vs. ExPASy TrEMBL
Match: A0A6J1E8Y2 (uncharacterized protein At3g17950 OS=Cucurbita moschata OX=3662 GN=LOC111431726 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.1e-45
Identity = 97/120 (80.83%), Postives = 103/120 (85.83%), Query Frame = 0 

Query: 141 QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDD 200
           QNRDQHAAA A+     GGSRKSKKPKRKTT AP LVADRKRRWWRLCRDDGVKP SL +
Sbjct: 59  QNRDQHAAATAAAG---GGSRKSKKPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGE 118

Query: 201 FLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGRVLPPAQTEEEASAAGLYADF 260
           FLEVERRF DGAF+GNAVDLEGVV+ DQQRNGR+LFADGRVLPPAQTEE+ SAAG    F
Sbjct: 119 FLEVERRFGDGAFFGNAVDLEGVVSADQQRNGRSLFADGRVLPPAQTEEDTSAAGALCRF 175

[Close]
BLAST of Spg011199 vs. ExPASy TrEMBL
Match: A0A1S4DUB1 (uncharacterized protein At3g17950 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503240 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.7e-44
Identity = 95/120 (79.17%), Postives = 99/120 (82.50%), Query Frame = 0 

Query: 141 QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDD 200
           QNRDQH AA  +     GGSRKSKK KRKTTTAP LVADRKRRWWRLCRDDGVKP SL +
Sbjct: 59  QNRDQHTAATVTAG---GGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGE 118

Query: 201 FLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGRVLPPAQTEEEASAAGLYADF 260
           FLEVERRF DGAFYGNAVDLEGVV  DQQRNGR+LFADGRVLPPAQTEE+ SA G    F
Sbjct: 119 FLEVERRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRF 175

[Close]
BLAST of Spg011199 vs. ExPASy TrEMBL
Match: A0A5D3BLI7 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002420 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.7e-44
Identity = 95/120 (79.17%), Postives = 99/120 (82.50%), Query Frame = 0 

Query: 141 QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDD 200
           QNRDQH AA  +     GGSRKSKK KRKTTTAP LVADRKRRWWRLCRDDGVKP SL +
Sbjct: 544 QNRDQHTAATVTAG---GGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGE 603

Query: 201 FLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGRVLPPAQTEEEASAAGLYADF 260
           FLEVERRF DGAFYGNAVDLEGVV  DQQRNGR+LFADGRVLPPAQTEE+ SA G    F
Sbjct: 604 FLEVERRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRF 660

[Close]
BLAST of Spg011199 vs. ExPASy TrEMBL
Match: A0A1S3CPP8 (uncharacterized protein At3g17950 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503240 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.7e-44
Identity = 95/120 (79.17%), Postives = 99/120 (82.50%), Query Frame = 0 

Query: 141 QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDD 200
           QNRDQH AA  +     GGSRKSKK KRKTTTAP LVADRKRRWWRLCRDDGVKP SL +
Sbjct: 71  QNRDQHTAATVTAG---GGSRKSKKTKRKTTTAPALVADRKRRWWRLCRDDGVKPASLGE 130

Query: 201 FLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGRVLPPAQTEEEASAAGLYADF 260
           FLEVERRF DGAFYGNAVDLEGVV  DQQRNGR+LFADGRVLPPAQTEE+ SA G    F
Sbjct: 131 FLEVERRFGDGAFYGNAVDLEGVVTADQQRNGRSLFADGRVLPPAQTEEDTSATGALCRF 187

[Close]
BLAST of Spg011199 vs. ExPASy TrEMBL
Match: A0A6J1KNQ0 (uncharacterized protein At3g17950-like OS=Cucurbita maxima OX=3661 GN=LOC111495839 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.3e-43
Identity = 96/120 (80.00%), Postives = 101/120 (84.17%), Query Frame = 0 

Query: 141 QNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDD 200
           QNRDQH AA  + AG  GGSRKSKKPKRKTT AP LVADRKRRWWRLCRDDGVKP SL +
Sbjct: 59  QNRDQHTAA-TNAAG--GGSRKSKKPKRKTTAAPALVADRKRRWWRLCRDDGVKPASLGE 118

Query: 201 FLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGRVLPPAQTEEEASAAGLYADF 260
           FLEVERRF DGAF+ NAVDLEGVV+ DQQRNGR LFADGRVLPPAQTEE+ SAAG    F
Sbjct: 119 FLEVERRFGDGAFFDNAVDLEGVVSADQQRNGRYLFADGRVLPPAQTEEDTSAAGALCRF 175

[Close]
BLAST of Spg011199 vs. TAIR 10
Match: AT3G17950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 3.9e-11
Identity = 48/130 (36.92%), Postives = 69/130 (53.08%), Query Frame = 0 

Query: 140 RQNRDQHAAANASVA-GGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDD------- 199
           R +  +H + + +++      +R++ + KR  + +      R+R+WWR CRDD       
Sbjct: 53  RASSRRHVSPSVAISRASSSNARRNHQRKRPPSNSAEPEPHRRRKWWRFCRDDDDDAAGN 112

Query: 200 GV-------KPTSLDDFLEVERRFEDGAFYGNA-VDLEGVVAV---DQQ--RNGRNLFAD 249
           G+       K +SL ++LEVERRF D A Y +A  +LE  V     DQQ     R LFAD
Sbjct: 113 GIHRGTGDSKRSSLGEYLEVERRFGDEAVYNSAEAELEDAVVARYQDQQPVMGERALFAD 172

[Close]
BLAST of Spg011199 vs. TAIR 10
Match: AT3G17950.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 3.9e-11
Identity = 48/130 (36.92%), Postives = 69/130 (53.08%), Query Frame = 0 

Query: 140 RQNRDQHAAANASVA-GGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDD------- 199
           R +  +H + + +++      +R++ + KR  + +      R+R+WWR CRDD       
Sbjct: 14  RASSRRHVSPSVAISRASSSNARRNHQRKRPPSNSAEPEPHRRRKWWRFCRDDDDDAAGN 73

Query: 200 GV-------KPTSLDDFLEVERRFEDGAFYGNA-VDLEGVVAV---DQQ--RNGRNLFAD 249
           G+       K +SL ++LEVERRF D A Y +A  +LE  V     DQQ     R LFAD
Sbjct: 74  GIHRGTGDSKRSSLGEYLEVERRFGDEAVYNSAEAELEDAVVARYQDQQPVMGERALFAD 133

The following BLAST results are available for this feature:
BLAST of Spg011199 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022924210.12.2e-4580.83uncharacterized protein At3g17950 [Cucurbita moschata] >XP_022924211.1 uncharact... [more]
KAG6584313.15.0e-4580.00hypothetical protein SDJN03_20245, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023520118.15.0e-4580.00uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo] >XP_02352011... [more]
XP_038895169.13.2e-4479.17uncharacterized protein At3g17950 [Benincasa hispida][more]
XP_016899568.15.5e-4479.17PREDICTED: uncharacterized protein At3g17950 isoform X2 [Cucumis melo] >XP_01689... [more]
BLAST of Spg011199 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6DR245.4e-1036.92Uncharacterized protein At3g17950 OS=Arabidopsis thaliana OX=3702 GN=Y-3 PE=1 SV... [more]
BLAST of Spg011199 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E8Y21.1e-4580.83uncharacterized protein At3g17950 OS=Cucurbita moschata OX=3662 GN=LOC111431726 ... [more]
A0A1S4DUB12.7e-4479.17uncharacterized protein At3g17950 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10350... [more]
A0A5D3BLI72.7e-4479.17Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3CPP82.7e-4479.17uncharacterized protein At3g17950 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10350... [more]
A0A6J1KNQ02.3e-4380.00uncharacterized protein At3g17950-like OS=Cucurbita maxima OX=3661 GN=LOC1114958... [more]
BLAST of Spg011199 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G17950.13.9e-1136.92unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G17950.23.9e-1136.92unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..288
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..288
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..109
NoneNo IPR availablePANTHERPTHR33544:SF15BNAANNG11020D PROTEINcoord: 141..261
IPR040344Uncharacterized protein At3g17950-likePANTHERPTHR33544FAMILY NOT NAMEDcoord: 141..261

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg011199.1Spg011199.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding