Spg011167 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg011167
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	60S ribosomal protein L38
Location	scaffold4: 29108592 .. 29110579 (-)
RNA-Seq Expression	Spg011167
Synteny	Spg011167

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCAAACCCTAGAATTGATCCATCGGACTCTGTTCTCTACGAATCCTAAACATGGTACGCCCTCTCTTCCCTACGCTTTGGTTTACTCGGTTTCATTGTTCTTGCCTGTATTTCTGTTGATTCCACTTACACAAGTGTGGTGTTATTCTTCATTTATGCTGGGATTTCATGGCCGAATCTTTGTTGTAACAATTTGCTTTTGAGATTTCTGTTGATTGCACTTACACAAGTGTAATGTTATTCTTCATTTATGCTAGGATTTCATGGCCGAATCTTTGTTGTACCCAATTAACAATTTGCTTTCTGTGCAACTGATGCTAATTATTTGACAAACTGCTTACCTTAAGAGGCCTCAATTGGCCGTCACACCACCACGCCACAGAGACCCACGCAGCAATTGTTTCCAGTTTTCTGACCCTGTACTTTACCCTCACTATCCTCATCTTCCTTTTGTCTTCTAAACTACTCTTAACATTCCAAGTCAAAAACAAGTTTTTTTCGTTTTTTTATATTACTGTTCGAATGCTAAAGATCTCCAATTGTTCTAGTCAGTTTTTTTTTTGGTTTTTTGTCTTCAACTTTTCTAATAACGGAGCTAGGAATCGGGTGCTGGTAAGAATTTGGATGAGATTATATTATTTGTTGCTCAACTAGGTACTCAAAAATGTTTTGGTTCGAGTAATTCTGTTCCATGTCATCTTTGGTATTTTTTTTCAATAATGTTGCGAGAGCATTCCATCCAATGTCCTGAAACTTTTAACCTTACATCTTTGATTGATTTATAATGCATTGAATACCTTAACATGGTCGTGTGTTCTGAGGTTGGTTGATCTTCCCATTTAGTTCACATTATTTCTAGCAGTGAATGGGTGTTATTAATTTATCAGTGGCATTGTTTCTACCTCTGGTATTGTCGTAAATTGTTACCATGTCTTGAATGTGTCGATGAACTTGCTTTGTTTGAATGCCATTACCATAAGATCTCAAAAAATAGTATCAGTATGGTTGAAACTCCCTTTTGTGGACAGCCGAAGCAAATCCATGAGATTAAAGACTTTCTTCTCACTGCAAGAAGAAAGGATGCCCGTTCTGTCAAAATTAAGAGGAGCAGAGATGTAGTCAAGTTTAAGGTTCGCTGCTCTAAGTACCTTTACACGCTCTGCGTGTTCGACTCTGAGAAGGCTGACAAATTGAAGCAGTCTCTTCCACCAGGTATTCTTTTAAGCTCTTATACATTATGTTCAGGAGTTGTTCTGATTACTGCTAGTTTAGCAAGAAAAGCAACCGTTAACTAATTATCTGTTTGTGCTATTTTAATCTTGGATTTAAATTTGTAGGTATTATTGTTTATCTACTTATATAGCCTTTTAATTCATAAATATTTTTGGTTTAAATTGCTGTAGGTTTGAGTGTGCAAGATCTTTGAACAAGTAGTGGGTGATGTTTTGAGATTCGTACGGAAAAAATCAAGAGCTGCATTTTTTACTTGTTGTCAGACTGATGTTGGATGTTTTTATATTTATATAGGGATTCCCATTTTTGTTATAATGCTTCTAACCTTTTTAGCGTGTTTTCAATTTTATGAACGTCAGAGATTTGTTCATGGTTGATGCAAAACTACAATCATCATTTGCCCGTTTGCTCTTTTTTTGTTTTTTTTTTTTTCAACTTCGAAATTGTAGTTTTGCTTGCAGAACTGAGTAGGCGGCATGTGAATCTTGTCGTTGGACTTTTCAGTCCAAGTCGATCATAAAAAATATAGGAAGAATGTTTTCTTTTGTTTAAATTTGTTTGGCTCTTAAAGATTTAGGGGAAAGAACAGTTTTGATTCCTAGAAATCCTTTTCGTTTCAGGGTCTTTTTTGGCTATTTTTCTGCCATTCAATATTTGTTTAATCCATGTTGTTTTAGTACGTGTATTTGTCTATTTGAACCTAGCTTAATTAAGGAAAGTATTATACAATTTTGTCTCAAAGGTCGAAGGTGTG

mRNA sequence

GCCCAAACCCTAGAATTGATCCATCGGACTCTGTTCTCTACGAATCCTAAACATGGTACGCCCTCTCTTCCCTACGCTTTGGTTTACTCGGTTTCATTGTTCTTGCCTGTATTTCTGTTGATTCCACTTACACAAGTGTGGTGTTATTCTTCATTTATGCTGGGATTTCATGGCCGAATCTTTGTTATCTCAAAAAATAGTATCAGTATGGTTGAAACTCCCTTTTGTGGACAGCCGAAGCAAATCCATGAGATTAAAGACTTTCTTCTCACTGCAAGAAGAAAGGATGCCCGTTCTGTCAAAATTAAGAGGAGCAGAGATGTAGTCAAGTTTAAGGTTCGCTGCTCTAAGTACCTTTACACGCTCTGCGTGTTCGACTCTGAGAAGGCTGACAAATTGAAGCAGTCTCTTCCACCAGGTATTCTTTTAAGCTCTTATACATTATGTTCAGGAGTTGTTCTGATTACTGCTAGTTTGAGTGTGCAAGATCTTTGA

Coding sequence (CDS)

GCCCAAACCCTAGAATTGATCCATCGGACTCTGTTCTCTACGAATCCTAAACATGGTACGCCCTCTCTTCCCTACGCTTTGGTTTACTCGGTTTCATTGTTCTTGCCTGTATTTCTGTTGATTCCACTTACACAAGTGTGGTGTTATTCTTCATTTATGCTGGGATTTCATGGCCGAATCTTTGTTATCTCAAAAAATAGTATCAGTATGGTTGAAACTCCCTTTTGTGGACAGCCGAAGCAAATCCATGAGATTAAAGACTTTCTTCTCACTGCAAGAAGAAAGGATGCCCGTTCTGTCAAAATTAAGAGGAGCAGAGATGTAGTCAAGTTTAAGGTTCGCTGCTCTAAGTACCTTTACACGCTCTGCGTGTTCGACTCTGAGAAGGCTGACAAATTGAAGCAGTCTCTTCCACCAGGTATTCTTTTAAGCTCTTATACATTATGTTCAGGAGTTGTTCTGATTACTGCTAGTTTGAGTGTGCAAGATCTTTGA

Protein sequence

AQTLELIHRTLFSTNPKHGTPSLPYALVYSVSLFLPVFLLIPLTQVWCYSSFMLGFHGRIFVISKNSISMVETPFCGQPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGILLSSYTLCSGVVLITASLSVQDL

Homology

[Close]

BLAST of Spg011167 vs. NCBI nr
Match: KAE8651744.1 (hypothetical protein Csa_006027 [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 7.4e-27
Identity = 66/74 (89.19%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 70  MVETPF---CGQPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFD 129
           M+  PF    GQPKQIHEIKDFLLTARRKDARSVKIKRS+DVVKFKVRCSKYLYTLCVFD
Sbjct: 1   MLNLPFVSLVGQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD 60

Query: 130 SEKADKLKQSLPPG 141
           SEKADKLKQSLPPG
Sbjct: 61  SEKADKLKQSLPPG 74

[Close]

BLAST of Spg011167 vs. NCBI nr
Match: XP_017413899.1 (PREDICTED: C-terminal binding protein AN-like [Vigna angularis])

HSP 1 Score: 131.3 bits (329), Expect = 7.4e-27
Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 78  QPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 137
           QPKQIHEIKDFLLTARRKDARSVKIKRS+DVVKFKVRCSKYLYTLCVFDSEKADKLKQSL
Sbjct: 180 QPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 239

Query: 138 PPGILLSSYTLC 150
           PPG+   S  LC
Sbjct: 240 PPGMSRDSRNLC 251

[Close]

BLAST of Spg011167 vs. NCBI nr
Match: PKI38043.1 (hypothetical protein CRG98_041573 [Punica granatum])

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-26
Identity = 64/68 (94.12%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 76  CGQPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQ 135
           C QPKQIHEIKDFLLTARRKDARSVKIKRS+DVVKFKVRCSKYLYTLCVFDSEKADKLKQ
Sbjct: 9   CWQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQ 68

Query: 136 SLPPGILL 144
           SLPPG  L
Sbjct: 69  SLPPGSFL 76

[Close]

BLAST of Spg011167 vs. NCBI nr
Match: XP_022946384.1 (60S ribosomal protein L38 isoform X1 [Cucurbita moschata] >XP_022972863.1 60S ribosomal protein L38 isoform X1 [Cucurbita maxima] >XP_023545547.1 60S ribosomal protein L38 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545638.1 60S ribosomal protein L38 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-26
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 77  GQPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQS 136
           GQPKQIHEIKDFLLTARRKDARSVKIKRS+DVVKFKVRCSKYLYTLCVFDSEKADKLKQS
Sbjct: 3   GQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQS 62

Query: 137 LPPGI 142
           LPPG+
Sbjct: 63  LPPGL 67

[Close]

BLAST of Spg011167 vs. NCBI nr
Match: KOM44433.1 (hypothetical protein LR48_Vigan05g203800 [Vigna angularis])

HSP 1 Score: 130.2 bits (326), Expect = 1.6e-26
Identity = 64/69 (92.75%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 78  QPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 137
           QPKQIHEIKDFLLTARRKDARSVKIKRS+DVVKFKVRCSKYLYTLCVFDSEKADKLKQSL
Sbjct: 11  QPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 70

Query: 138 PPGILLSSY 147
           PPG LL+ +
Sbjct: 71  PPGSLLNYF 79

[Close]

BLAST of Spg011167 vs. ExPASy Swiss-Prot
Match: O22860 (60S ribosomal protein L38 OS=Arabidopsis thaliana OX=3702 GN=RPL38A PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.5e-27
Identity = 58/63 (92.06%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 79  PKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 138
           PKQIHEIKDFLLTARRKDARSVKIKRS+D+VKFKVRCS+YLYTLCVFD EKADKLKQSLP
Sbjct: 2   PKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSLP 61

Query: 139 PGI 142
           PG+
Sbjct: 62  PGL 64

[Close]

BLAST of Spg011167 vs. ExPASy Swiss-Prot
Match: P46291 (60S ribosomal protein L38 OS=Solanum lycopersicum OX=4081 GN=RPL38 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.2e-25
Identity = 55/63 (87.30%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 79  PKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 138
           PKQIHEIKDFLLTARRKDAR+VKIK+++D+VKFKVRCSKYLYTLCV D EKADKLKQSLP
Sbjct: 2   PKQIHEIKDFLLTARRKDARTVKIKKNKDMVKFKVRCSKYLYTLCVSDFEKADKLKQSLP 61

Query: 139 PGI 142
           PG+
Sbjct: 62  PGL 64

[Close]

BLAST of Spg011167 vs. ExPASy Swiss-Prot
Match: Q95V84 (60S ribosomal protein L38 OS=Branchiostoma belcheri OX=7741 GN=RPL38 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.0e-23
Identity = 52/63 (82.54%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 79  PKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 138
           PKQIHEIKDFLLTARRKDA+SVKIK+++D VKFKVRCS+YLYTL + D EKADKLKQSLP
Sbjct: 2   PKQIHEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKADKLKQSLP 61

Query: 139 PGI 142
           PG+
Sbjct: 62  PGL 64

[Close]

BLAST of Spg011167 vs. ExPASy Swiss-Prot
Match: Q32PB9 (60S ribosomal protein L38 OS=Bos taurus OX=9913 GN=RPL38 PE=3 SV=4)

HSP 1 Score: 102.4 bits (254), Expect = 4.8e-21
Identity = 48/63 (76.19%), Postives = 58/63 (92.06%), Query Frame = 0


Query: 79  PKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 138
           P++I EIKDFLLTARRKDA+SVKIK+++D VKFKVRCS+YLYTL + D EKA+KLKQSLP
Sbjct: 2   PRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLP 61

Query: 139 PGI 142
           PG+
Sbjct: 62  PGL 64

[Close]

BLAST of Spg011167 vs. ExPASy Swiss-Prot
Match: P63173 (60S ribosomal protein L38 OS=Homo sapiens OX=9606 GN=RPL38 PE=1 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 4.8e-21
Identity = 48/63 (76.19%), Postives = 58/63 (92.06%), Query Frame = 0


Query: 79  PKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 138
           P++I EIKDFLLTARRKDA+SVKIK+++D VKFKVRCS+YLYTL + D EKA+KLKQSLP
Sbjct: 2   PRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLP 61

Query: 139 PGI 142
           PG+
Sbjct: 62  PGL 64

[Close]

BLAST of Spg011167 vs. ExPASy TrEMBL
Match: M5XAG4 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppb023080mg PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.2e-27
Identity = 64/72 (88.89%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 70  MVETPFCGQPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEK 129
           MV+   C QPKQIHEIKDFLLTARRKDARSVKIKRS+D VKFKVRCSKYLYTLCVFDSEK
Sbjct: 1   MVDVKTCEQPKQIHEIKDFLLTARRKDARSVKIKRSKDAVKFKVRCSKYLYTLCVFDSEK 60

Query: 130 ADKLKQSLPPGI 142
           ADKLKQSLPPG+
Sbjct: 61  ADKLKQSLPPGL 72

[Close]

BLAST of Spg011167 vs. ExPASy TrEMBL
Match: A0A6J1IBC7 (60S ribosomal protein L38 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471373 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 6.1e-27
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 77  GQPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQS 136
           GQPKQIHEIKDFLLTARRKDARSVKIKRS+DVVKFKVRCSKYLYTLCVFDSEKADKLKQS
Sbjct: 3   GQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQS 62

Query: 137 LPPGI 142
           LPPG+
Sbjct: 63  LPPGL 67

[Close]

BLAST of Spg011167 vs. ExPASy TrEMBL
Match: A0A2I0I2J4 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_041573 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 6.1e-27
Identity = 64/68 (94.12%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 76  CGQPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQ 135
           C QPKQIHEIKDFLLTARRKDARSVKIKRS+DVVKFKVRCSKYLYTLCVFDSEKADKLKQ
Sbjct: 9   CWQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQ 68

Query: 136 SLPPGILL 144
           SLPPG  L
Sbjct: 69  SLPPGSFL 76

[Close]

BLAST of Spg011167 vs. ExPASy TrEMBL
Match: A0A6J1G3M5 (60S ribosomal protein L38 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450460 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 6.1e-27
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 77  GQPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQS 136
           GQPKQIHEIKDFLLTARRKDARSVKIKRS+DVVKFKVRCSKYLYTLCVFDSEKADKLKQS
Sbjct: 3   GQPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQS 62

Query: 137 LPPGI 142
           LPPG+
Sbjct: 63  LPPGL 67

[Close]

BLAST of Spg011167 vs. ExPASy TrEMBL
Match: A0A0L9UNW4 (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g203800 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 8.0e-27
Identity = 64/69 (92.75%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 78  QPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 137
           QPKQIHEIKDFLLTARRKDARSVKIKRS+DVVKFKVRCSKYLYTLCVFDSEKADKLKQSL
Sbjct: 11  QPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 70

Query: 138 PPGILLSSY 147
           PPG LL+ +
Sbjct: 71  PPGSLLNYF 79

[Close]

BLAST of Spg011167 vs. TAIR 10
Match: AT2G43460.1 (Ribosomal L38e protein family )

HSP 1 Score: 122.9 bits (307), Expect = 2.5e-28
Identity = 58/63 (92.06%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 79  PKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 138
           PKQIHEIKDFLLTARRKDARSVKIKRS+D+VKFKVRCS+YLYTLCVFD EKADKLKQSLP
Sbjct: 2   PKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSLP 61

Query: 139 PGI 142
           PG+
Sbjct: 62  PGL 64

[Close]

BLAST of Spg011167 vs. TAIR 10
Match: AT3G59540.1 (Ribosomal L38e protein family )

HSP 1 Score: 122.9 bits (307), Expect = 2.5e-28
Identity = 58/63 (92.06%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 79  PKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLP 138
           PKQIHEIKDFLLTARRKDARSVKIKRS+D+VKFKVRCS+YLYTLCVFD EKADKLKQSLP
Sbjct: 2   PKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSLP 61

Query: 139 PGI 142
           PG+
Sbjct: 62  PGL 64

The following BLAST results are available for this feature:

BLAST of Spg011167 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651744.1	7.4e-27	89.19	hypothetical protein Csa_006027 [Cucumis sativus]	[more]
XP_017413899.1	7.4e-27	90.28	PREDICTED: C-terminal binding protein AN-like [Vigna angularis]	[more]
PKI38043.1	1.3e-26	94.12	hypothetical protein CRG98_041573 [Punica granatum]	[more]
XP_022946384.1	1.3e-26	96.92	60S ribosomal protein L38 isoform X1 [Cucurbita moschata] >XP_022972863.1 60S ri...	[more]
KOM44433.1	1.6e-26	92.75	hypothetical protein LR48_Vigan05g203800 [Vigna angularis]	[more]

BLAST of Spg011167 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22860	3.5e-27	92.06	60S ribosomal protein L38 OS=Arabidopsis thaliana OX=3702 GN=RPL38A PE=3 SV=1	[more]
P46291	4.2e-25	87.30	60S ribosomal protein L38 OS=Solanum lycopersicum OX=4081 GN=RPL38 PE=3 SV=1	[more]
Q95V84	3.0e-23	82.54	60S ribosomal protein L38 OS=Branchiostoma belcheri OX=7741 GN=RPL38 PE=3 SV=1	[more]
Q32PB9	4.8e-21	76.19	60S ribosomal protein L38 OS=Bos taurus OX=9913 GN=RPL38 PE=3 SV=4	[more]
P63173	4.8e-21	76.19	60S ribosomal protein L38 OS=Homo sapiens OX=9606 GN=RPL38 PE=1 SV=2	[more]

BLAST of Spg011167 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
M5XAG4	1.2e-27	88.89	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppb023080mg PE=3 SV=1	[more]
A0A6J1IBC7	6.1e-27	96.92	60S ribosomal protein L38 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471373...	[more]
A0A2I0I2J4	6.1e-27	94.12	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_041573 PE=3 SV=1	[more]
A0A6J1G3M5	6.1e-27	96.92	60S ribosomal protein L38 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114504...	[more]
A0A0L9UNW4	8.0e-27	92.75	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g203800 PE...	[more]

BLAST of Spg011167 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43460.1	2.5e-28	92.06	Ribosomal L38e protein family	[more]
AT3G59540.1	2.5e-28	92.06	Ribosomal L38e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038464	Ribosomal protein L38e superfamily	GENE3D	3.30.720.90		coord: 78..144 e-value: 1.1E-31 score: 110.7
IPR002675	Ribosomal protein L38e	PFAM	PF01781	Ribosomal_L38e	coord: 79..141 e-value: 1.9E-31 score: 108.0
IPR002675	Ribosomal protein L38e	PANTHER	PTHR10965	60S RIBOSOMAL PROTEIN L38	coord: 79..141
None	No IPR available	PANTHER	PTHR10965:SF14	60S RIBOSOMAL PROTEIN L38	coord: 79..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg011167.1	Spg011167.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome