Spg011139 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGACTAACTTGGTTAATGAGTTTAAGCCGATTAGTCTCGTATCGTTGGAGCTTCTGATCTGTAGGTCCATTAGGTCCCACTGGTAGCTCGTAAAAAGACTTGAAGCAAACAAATATAAATTGTAAATTGAAAGTGTTCAATTTATTTGGGGAATCGTATAATGTATATTGATGCATTATAATATAAAGTTTATGAAACTTTATAATATAATTTTTGAATTAATTTCAAAAATTAATTCTTGAGAGAAAATATTTCAAAGAGTTCAAATAAATTTAATATGAATTGGATTCATATTAATTTTAATAAAATCCCTAAGATTAAATATAGGATATTTAATTGGGTAATTAATTAATCATGGAATTAATTAATTATTTATTAAAATTAGAAACCTTTTCCTATTAGGAAAGAAAATATTTGAAAGAGTTCAAATAAATTTAATATGAATTGGATTCATATTAATTTTAATTTTAATAAAATCCCTAAGATTAAATATGTGATATTTAATTGGGTAATTAATTAATTATGGAATTAATTAATTATTAAAATTAGATATTGTTCAGATAATAGATTTGAACTTATTCCTACACCTTTTCCTATTAGGAAAAGGTCTTGGCCTTTACCTATATATAGGACCCCTGGGGTGGGGTGAAAGACATCCCATTGTCTCTCCTTCTCTCAGAGATTTCTCCCAAAAGACTCCCACAAGTCTCCTGCTTCAAGAAGTCTTAGAGATATACCGGTGTAGCCGAGTGGTGGTGTTCGCACAAGAGGGTTGCTGCGTCTTCAATCTTATTGGCAAGAAAAGGCGAATTGATCAAGGCTTTCTACAAAAGTAAGTTTTCTACAAAAGTAGTGAAATCCTTGATCACTAGGATCGATCTAGTTGATCTTTTAGCATGTTTATAGCCTATGTACAGCCCATTAAATATATTTTTATTGTTGTAATATTTTGCAAATTGTATTGGTATTTCAATTAGAATCTAAGACTCTGAGTAGGTTCGGTAATACTTTCCGCTGCGTGGGGCTTTTATCCCTTCAATGAGCCCGGAGTGCTTCTTGGCTTTTCATATAACCCACCTACTCAGCCTGTGCTTAATTAATTAGATTCCCTGATTGCCCACAAACAACCTAATTAATTAATTATTTTAATTGCGCCCGCTGCCCCTCATGCTTAGACTGATAAATCCTCAATCTAAATCTAATTAGTTAAATTAGCAATTCGATAAATCCTCAAAATTACTAATTAACTAACTCCATTATCACCGCAAGGCCTGCAATTGTCTAATTAAACTAGGAATTTAAATTTTCTACTTTAATTAAATCAATTTCACCTATGCTCTTAGGCCTATCGGAAGTCTACGCTAGGCTACCGTCAAACTAGCGATGGATCCACCTCAACCTAGTGGCTATCTAAAAATAACAGATAGATCATGCTTGTATTCAATTTAAGAGGCGTCAATTCTTAAACTAACATACAAACAAGATGGTTTAAACAAGAATCATAGGATGCAACATAATCATTCAGAAAAGTCTTAAAAACAGAACGTAAATCTCATGAAAACTGAAATAAACTTACAACCGAGGTTCCGATTACAGCGAACCGCGCTTAGACAGCCATAGACGAGTCAAATCTAAGCCCCAAGGCTTGATTGAACGACCCAAAACAAAAATAAACTAATAACTAAAGAGAAAATACAAAGAAAATCGAGAGCAATCGAAGAGAAATGAAGAAAGAAAGCTGAATTATGACCTAACGGCGGAAAAATTCAGATTTATAACATCGCGCCGGCGTCGGGATGTTAGGCATGGCATCTCGATGCTGGGCCTTCTTTCCACGGGCTTGGGCTTAAACAGCGTCGAGTCACTGCTATTGCAGCATCTCAACGCTAGCTCTTGGGTTTGCCCAAATATGCAATTGTCCTTTTATCCTTTTGGCTCCAATCTCGAGGTCTGAACGCTCCGGTCACGTTCTTTAGCTCCATATCCTCTCGGGAACTCCAAATTAGCCTGTAAACGTCCTAAAACTCCCAAATTAGTGCCCAATTGAAAAATTGGCCTAATTATCCTCTTGTGCTCGAAATCCTACAAAATAAACAATTAAACCATAAAACAAAAACTAATAAGATTAAAATAATGGTAATTAAATAGCACATTTCAGGTGTTATCAACGCTATTGTTGCAAATCACAGTCAATGGGGAGAAGAAGAAACACCTTCTAGGAGTAGTGTCAAGGTCCAAGAAGTCAATCATCTCGAGACACTCTTAGAACGAATGTTAACTATGAACGATATGCTTATGAATCTGACTTTAGGAAATCAAGTTCAAGTTGCAGCCGTGAGTCAAGTTTCAAACCCCATGTGTACTACTTGCAATGAAGAGCACTTTTTTGAAGATTGTCCTCAGAATCAGCTGTAATTTACTTTGTACGTGCACATAATAGAGTAAATCCTTACTCCAACACTTTCAATCCAAAATGGAGACAACACTCTAACTTTTCTTGGTGAGGACAACATGTTAGCACATACAACACACCCCTTTTGTTTGGCAGGGAGGACCACCAGGATTTAATAACCAAACTCAACTGAAGATTACACAACCTTTGCAGCCGATTCATGTGCAACCCCAATCGACCTCAAACTTGGAGAATCGTATGTGGGAACTGATGACTAAGAATGATGCGATAATTCAAAGTCAAACAACTTCCTTGAAGAATCTTGAAACTCAAATTGGGCAGTTAGTTCAGGAGATGAGGAGTAGACCAACAATCACATTGCTACAAATAAATGGTGCACAACAAAGAGAAGGAAAAGAGCATTGCAAAGCCACAACTCTTATAAGCGGATTGTAA ATGCTGGGCCTTCTTTCCACGGGCTTGGGCTTAAACAGCGTCGAGTCACTGCTATTGCAGCATCTCAACGCTAGCTCTTGGGTTTGCCCAAATATGCAATTGTCCTTTTATCCTTTTGGCTCCAATCTCGAGCACATTTCAGGTGTTATCAACGCTATTGTTGCAAATCACAGTCAATGGGGAGAAGAAGAAACACCTTCTAGGAGTAGTGTCAAGGTCCAAGAAGTCAATCATCTCGAGACACTCTTAGAACGAATGTTAACTATGAACGATATGCTTATGAATCTGACTTTAGGAAATCAAGTTCAAGTTGCAGCCCCGATTCATGTGCAACCCCAATCGACCTCAAACTTGGAGAATCGTATGTGGGAACTGATGACTAAGAATGATGCGATAATTCAAAGTCAAACAACTTCCTTGAAGAATCTTGAAACTCAAATTGGGCAGTTAGTTCAGGAGATGAGGAGTAGACCAACAATCACATTGCTACAAATAAATGGTGCACAACAAAGAGAAGGAAAAGAGCATTGCAAAGCCACAACTCTTATAAGCGGATTGTAA ATGCTGGGCCTTCTTTCCACGGGCTTGGGCTTAAACAGCGTCGAGTCACTGCTATTGCAGCATCTCAACGCTAGCTCTTGGGTTTGCCCAAATATGCAATTGTCCTTTTATCCTTTTGGCTCCAATCTCGAGCACATTTCAGGTGTTATCAACGCTATTGTTGCAAATCACAGTCAATGGGGAGAAGAAGAAACACCTTCTAGGAGTAGTGTCAAGGTCCAAGAAGTCAATCATCTCGAGACACTCTTAGAACGAATGTTAACTATGAACGATATGCTTATGAATCTGACTTTAGGAAATCAAGTTCAAGTTGCAGCCCCGATTCATGTGCAACCCCAATCGACCTCAAACTTGGAGAATCGTATGTGGGAACTGATGACTAAGAATGATGCGATAATTCAAAGTCAAACAACTTCCTTGAAGAATCTTGAAACTCAAATTGGGCAGTTAGTTCAGGAGATGAGGAGTAGACCAACAATCACATTGCTACAAATAAATGGTGCACAACAAAGAGAAGGAAAAGAGCATTGCAAAGCCACAACTCTTATAAGCGGATTGTAA MLGLLSTGLGLNSVESLLLQHLNASSWVCPNMQLSFYPFGSNLEHISGVINAIVANHSQWGEEETPSRSSVKVQEVNHLETLLERMLTMNDMLMNLTLGNQVQVAAPIHVQPQSTSNLENRMWELMTKNDAIIQSQTTSLKNLETQIGQLVQEMRSRPTITLLQINGAQQREGKEHCKATTLISGL Homology
BLAST of Spg011139 vs. NCBI nr
Match: XP_023522102.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111785979 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 87.8 bits (216), Expect = 1.1e-13 Identity = 53/141 (37.59%), Postives = 80/141 (56.74%), Query Frame = 0
BLAST of Spg011139 vs. NCBI nr
Match: XP_030494802.1 (uncharacterized protein LOC115710583 [Cannabis sativa]) HSP 1 Score: 83.6 bits (205), Expect = 2.0e-12 Identity = 64/197 (32.49%), Postives = 87/197 (44.16%), Query Frame = 0
BLAST of Spg011139 vs. NCBI nr
Match: XP_030495102.1 (uncharacterized protein LOC115710889 [Cannabis sativa]) HSP 1 Score: 80.1 bits (196), Expect = 2.2e-11 Identity = 42/79 (53.16%), Postives = 54/79 (68.35%), Query Frame = 0
BLAST of Spg011139 vs. NCBI nr
Match: XP_030497888.1 (uncharacterized protein LOC115713544 [Cannabis sativa]) HSP 1 Score: 79.7 bits (195), Expect = 2.9e-11 Identity = 63/202 (31.19%), Postives = 86/202 (42.57%), Query Frame = 0
BLAST of Spg011139 vs. NCBI nr
Match: XP_030509134.1 (uncharacterized protein LOC115723804 [Cannabis sativa]) HSP 1 Score: 79.3 bits (194), Expect = 3.8e-11 Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 0
BLAST of Spg011139 vs. ExPASy TrEMBL
Match: A0A6J1DYG0 (uncharacterized protein LOC111025764 OS=Momordica charantia OX=3673 GN=LOC111025764 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 5.9e-10 Identity = 38/73 (52.05%), Postives = 49/73 (67.12%), Query Frame = 0
BLAST of Spg011139 vs. ExPASy TrEMBL
Match: A0A6J1DW02 (uncharacterized protein LOC111024897 OS=Momordica charantia OX=3673 GN=LOC111024897 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 1.5e-08 Identity = 40/87 (45.98%), Postives = 51/87 (58.62%), Query Frame = 0
BLAST of Spg011139 vs. ExPASy TrEMBL
Match: A0A6J1E110 (uncharacterized protein LOC111025424 OS=Momordica charantia OX=3673 GN=LOC111025424 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 7.2e-08 Identity = 35/73 (47.95%), Postives = 46/73 (63.01%), Query Frame = 0
BLAST of Spg011139 vs. ExPASy TrEMBL
Match: A0A6J1DWK1 (uncharacterized protein LOC111025053 OS=Momordica charantia OX=3673 GN=LOC111025053 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 3.6e-07 Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 0
BLAST of Spg011139 vs. ExPASy TrEMBL
Match: A0A5B6VWJ0 (Retroelement pol polyprotein-like OS=Gossypium australe OX=47621 GN=EPI10_024080 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 3.6e-07 Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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