Spg011128 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg011128
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Secretion protein HlyD family protein
Location	scaffold4: 29103594 .. 29105087 (-)
RNA-Seq Expression	Spg011128
Synteny	Spg011128

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGTGAAGATTCAGTTACTTCTCCAGATGTGGGAGGGTCTTACACCGATGAAGGACCTTCTGGTTCTAGTCATTTTGTAGACCCCGAGCTGTCCGATAGTAACGATGGAAAAATGGTTGGTTTTATGTAAGTGGGAATTGGTTAGAAAGGAACTCGAATAACTGTTTTTTTGGAGTTCCAACGAGGTTCAGAGAATACGGTAAGCTTTTTCTACATTCTCTCTTCCCGTTGGGATCCATTTCCTAGGGTTGTATATTTCTTTTAACTTCTTTCTCTGTTTTCTCAGTCCCTTTCAACATCCGACGCTCTTCTTAGGCTAAGAAGTTCGCCAGGCACGTGTTAACACTTGCAGTTTCTCAACGCAACGGTCCTTTCTTAGTCGACCAGAGAATTCTTGAATCGGTCGGATTATCACATCAACGCACCATTAGTACTAAAGGTGAGCCCCCAGGACACTGTTGGCCTCGATGACCTATGGTCGACCTCATCTGCCTGTGGTCGACCTCTACTCTTTTCGACGTGCCTTCTTCTCTTGGCCTTATATATGCATGTACTCACTGACTTTCTGATTTTCTTCTCATCTTCGACAGAAATGGCTTTTCGCAGGATGTAAGATTCTCAGAGGAAAAGGCGGGAAACTCGTAACAGAGCTGGGACCTCCCGAGCCACTTCTGTGGATCTAACTGAGGATGAGACCACATGGGCCCCTGCTGAACCCTTTCGTCGACCAGCTCCTTCAACCTGGAGAACTCGCTACCAAACGCGCTCCTCGGTTACCGAACCTAACCTCCAGACTGGCATCCCAGTTTTGCCTTGCGTGAGAATTATAATGGCGGGGGTAGCGAGGTGGAGATAATGACGCACGACTTCATGTGTTGGCAAGGGTTGCAGTCCATGAGACCCAAGGGAGAGCTGGGGGTTGAGGATCCTGCCCAAGGCATCAGGGACGTTCAACAATACCTTCGCAACGTGAGTTCTTAGAACATCTCCTTTCTCATGCCTCTTTTCGCCCTTTTGCTAACTTAATTTTGTTCTCCTTGGCATAGTTTTCACGAAGATCACCGCCTCCTCTGTTAGCTTGGCTAACAAGATCAACGAGCTTCAGTTGAACAACGTTCCTAGAAGTGAGCTTACTCAAGCTTAGGAGAGGCTTGACCAAGCAAACCGCCTACTGGATGAGGTTAAGGCAAAACTAAACTCTAGTGAAGCCGAGTTGGAAACAACGAAAGCTCAACTGAAGGAAGCTAAGGGTCACTTAGCCGATGCTAACTTTCTTGCTGAGGAGTTTAGGAAGACCAACGAATTCTACGCCATGCAAGACGAAATCTGGAACGATGGCATTAAGTGGGCTGTCAAGCGATTTGGCAAACGTCATCCTATCGTTGATGGTTCGTTCATTCAAGAAGATCTTGCCACCCTCTCGACCAACCGCAATCCCTTCGCTTCCTCTGATGAGTCTTCTGGCGGTAGAGATAATATGGACCTTTGA

mRNA sequence

ATGGCTAGTGAAGATTCAGTTACTTCTCCAGATGTGGGAGGGTCTTACACCGATGAAGGACCTTCTGGTTCTAGTCATTTTGTAGACCCCGAGCTGTCCGATAGTAACGATGGAAAAATGGCTAAGAAGTTCGCCAGGCACGTGTTAACACTTGCAGTTTCTCAACGCAACGGTCCTTTCTTAGTCGACCAGAGAATTCTTGAATCGGTCGGATTATCACATCAACGCACCATTAGTACTAAAGATTCTCAGAGGAAAAGGCGGGAAACTCGTAACAGAGCTGGGACCTCCCGAGCCACTTCTGTGGATCTAACTGAGGATGAGACCACATGGGCCCCTGCTGAACCCTTTCGTCGACCAGCTCCTTCAACCTGGAGAACTCGCTACCAAACGCGCTCCTCGGTTACCGAACCTAACCTCCAGACTGGCATCCCATCCATGAGACCCAAGGGAGAGCTGGGGGTTGAGGATCCTGCCCAAGGCATCAGGGACGTTCAACAATACCTTCGCAACGAGAGGCTTGACCAAGCAAACCGCCTACTGGATGAGGTTAAGGCAAAACTAAACTCTAGTGAAGCCGAGTTGGAAACAACGAAAGCTCAACTGAAGGAAGCTAAGGGTCACTTAGCCGATGCTAACTTTCTTGCTGAGGAGTTTAGGAAGACCAACGAATTCTACGCCATGCAAGACGAAATCTGGAACGATGGCATTAAGTGGGCTGTCAAGCGATTTGGCAAACGTCATCCTATCGTTGATGGTTCGTTCATTCAAGAAGATCTTGCCACCCTCTCGACCAACCGCAATCCCTTCGCTTCCTCTGATGAGTCTTCTGGCGGTAGAGATAATATGGACCTTTGA

Coding sequence (CDS)

ATGGCTAGTGAAGATTCAGTTACTTCTCCAGATGTGGGAGGGTCTTACACCGATGAAGGACCTTCTGGTTCTAGTCATTTTGTAGACCCCGAGCTGTCCGATAGTAACGATGGAAAAATGGCTAAGAAGTTCGCCAGGCACGTGTTAACACTTGCAGTTTCTCAACGCAACGGTCCTTTCTTAGTCGACCAGAGAATTCTTGAATCGGTCGGATTATCACATCAACGCACCATTAGTACTAAAGATTCTCAGAGGAAAAGGCGGGAAACTCGTAACAGAGCTGGGACCTCCCGAGCCACTTCTGTGGATCTAACTGAGGATGAGACCACATGGGCCCCTGCTGAACCCTTTCGTCGACCAGCTCCTTCAACCTGGAGAACTCGCTACCAAACGCGCTCCTCGGTTACCGAACCTAACCTCCAGACTGGCATCCCATCCATGAGACCCAAGGGAGAGCTGGGGGTTGAGGATCCTGCCCAAGGCATCAGGGACGTTCAACAATACCTTCGCAACGAGAGGCTTGACCAAGCAAACCGCCTACTGGATGAGGTTAAGGCAAAACTAAACTCTAGTGAAGCCGAGTTGGAAACAACGAAAGCTCAACTGAAGGAAGCTAAGGGTCACTTAGCCGATGCTAACTTTCTTGCTGAGGAGTTTAGGAAGACCAACGAATTCTACGCCATGCAAGACGAAATCTGGAACGATGGCATTAAGTGGGCTGTCAAGCGATTTGGCAAACGTCATCCTATCGTTGATGGTTCGTTCATTCAAGAAGATCTTGCCACCCTCTCGACCAACCGCAATCCCTTCGCTTCCTCTGATGAGTCTTCTGGCGGTAGAGATAATATGGACCTTTGA

Protein sequence

MASEDSVTSPDVGGSYTDEGPSGSSHFVDPELSDSNDGKMAKKFARHVLTLAVSQRNGPFLVDQRILESVGLSHQRTISTKDSQRKRRETRNRAGTSRATSVDLTEDETTWAPAEPFRRPAPSTWRTRYQTRSSVTEPNLQTGIPSMRPKGELGVEDPAQGIRDVQQYLRNERLDQANRLLDEVKAKLNSSEAELETTKAQLKEAKGHLADANFLAEEFRKTNEFYAMQDEIWNDGIKWAVKRFGKRHPIVDGSFIQEDLATLSTNRNPFASSDESSGGRDNMDL

Homology

[Close]

BLAST of Spg011128 vs. NCBI nr
Match: TYK01274.1 (Secretion protein HlyD family protein [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-10
Identity = 50/144 (34.72%), Postives = 75/144 (52.08%), Query Frame = 0


Query: 143 GIPSMRPKGELGVEDPAQ----GIRDVQQ----------------------YLRNERLDQ 202
           G+     +GE G +DP+Q    G+ D ++                      Y+  E L +
Sbjct: 129 GLVEFPMEGESGFQDPSQGFILGLHDFRRAFTRFSISFGRMGDELNHLYLNYVPREELMR 188

Query: 203 ANRLLDEVKAKLN----SSEAELETTKAQLKEAKGHLADANFLAEEFRKTNEFYAMQDEI 257
           ANR L+E K +L     SS+ +++  KAQL EAK  L+DA  LAE+F KT EF  MQ++I
Sbjct: 189 ANRRLEEAKVELGLCQASSQVKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKI 248

[Close]

BLAST of Spg011128 vs. NCBI nr
Match: XP_016902110.1 (PREDICTED: uncharacterized protein LOC103497199 isoform X3 [Cucumis melo])

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-10
Identity = 50/144 (34.72%), Postives = 75/144 (52.08%), Query Frame = 0


Query: 143 GIPSMRPKGELGVEDPAQ----GIRDVQQ----------------------YLRNERLDQ 202
           G+     +GE G +DP+Q    G+ D ++                      Y+  E L +
Sbjct: 145 GLVEFPMEGESGFQDPSQGFILGLHDFRRAFTRFSISFGRMGDELNHLYLNYVPREELMR 204

Query: 203 ANRLLDEVKAKLN----SSEAELETTKAQLKEAKGHLADANFLAEEFRKTNEFYAMQDEI 257
           ANR L+E K +L     SS+ +++  KAQL EAK  L+DA  LAE+F KT EF  MQ++I
Sbjct: 205 ANRRLEEAKVELGLCQASSQVKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKI 264

[Close]

BLAST of Spg011128 vs. NCBI nr
Match: XP_008457530.1 (PREDICTED: uncharacterized protein LOC103497199 isoform X1 [Cucumis melo])

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-10
Identity = 50/144 (34.72%), Postives = 75/144 (52.08%), Query Frame = 0


Query: 143 GIPSMRPKGELGVEDPAQ----GIRDVQQ----------------------YLRNERLDQ 202
           G+     +GE G +DP+Q    G+ D ++                      Y+  E L +
Sbjct: 190 GLVEFPMEGESGFQDPSQGFILGLHDFRRAFTRFSISFGRMGDELNHLYLNYVPREELMR 249

Query: 203 ANRLLDEVKAKLN----SSEAELETTKAQLKEAKGHLADANFLAEEFRKTNEFYAMQDEI 257
           ANR L+E K +L     SS+ +++  KAQL EAK  L+DA  LAE+F KT EF  MQ++I
Sbjct: 250 ANRRLEEAKVELGLCQASSQVKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKI 309

[Close]

BLAST of Spg011128 vs. NCBI nr
Match: KAA0033890.1 (Secretion protein HlyD family protein [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-10
Identity = 50/144 (34.72%), Postives = 75/144 (52.08%), Query Frame = 0


Query: 143 GIPSMRPKGELGVEDPAQ----GIRDVQQ----------------------YLRNERLDQ 202
           G+     +GE G +DP+Q    G+ D ++                      Y+  E L +
Sbjct: 180 GLVEFPMEGESGFQDPSQGFILGLHDFRRAFTRFSISFGRMGDELNHLYLNYVPREELMR 239

Query: 203 ANRLLDEVKAKLN----SSEAELETTKAQLKEAKGHLADANFLAEEFRKTNEFYAMQDEI 257
           ANR L+E K +L     SS+ +++  KAQL EAK  L+DA  LAE+F KT EF  MQ++I
Sbjct: 240 ANRRLEEAKVELGLCQASSQVKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKI 299

[Close]

BLAST of Spg011128 vs. NCBI nr
Match: XP_008457532.1 (PREDICTED: uncharacterized protein LOC103497199 isoform X2 [Cucumis melo])

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-10
Identity = 50/144 (34.72%), Postives = 75/144 (52.08%), Query Frame = 0


Query: 143 GIPSMRPKGELGVEDPAQ----GIRDVQQ----------------------YLRNERLDQ 202
           G+     +GE G +DP+Q    G+ D ++                      Y+  E L +
Sbjct: 157 GLVEFPMEGESGFQDPSQGFILGLHDFRRAFTRFSISFGRMGDELNHLYLNYVPREELMR 216

Query: 203 ANRLLDEVKAKLN----SSEAELETTKAQLKEAKGHLADANFLAEEFRKTNEFYAMQDEI 257
           ANR L+E K +L     SS+ +++  KAQL EAK  L+DA  LAE+F KT EF  MQ++I
Sbjct: 217 ANRRLEEAKVELGLCQASSQVKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKI 276

[Close]

BLAST of Spg011128 vs. ExPASy TrEMBL
Match: A0A5A7SSF9 (Secretion protein HlyD family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43059G00750 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 8.2e-11
Identity = 50/144 (34.72%), Postives = 75/144 (52.08%), Query Frame = 0


Query: 143 GIPSMRPKGELGVEDPAQ----GIRDVQQ----------------------YLRNERLDQ 202
           G+     +GE G +DP+Q    G+ D ++                      Y+  E L +
Sbjct: 180 GLVEFPMEGESGFQDPSQGFILGLHDFRRAFTRFSISFGRMGDELNHLYLNYVPREELMR 239

Query: 203 ANRLLDEVKAKLN----SSEAELETTKAQLKEAKGHLADANFLAEEFRKTNEFYAMQDEI 257
           ANR L+E K +L     SS+ +++  KAQL EAK  L+DA  LAE+F KT EF  MQ++I
Sbjct: 240 ANRRLEEAKVELGLCQASSQVKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKI 299

[Close]

BLAST of Spg011128 vs. ExPASy TrEMBL
Match: A0A5D3BQ22 (Secretion protein HlyD family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00610 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 8.2e-11
Identity = 50/144 (34.72%), Postives = 75/144 (52.08%), Query Frame = 0


Query: 143 GIPSMRPKGELGVEDPAQ----GIRDVQQ----------------------YLRNERLDQ 202
           G+     +GE G +DP+Q    G+ D ++                      Y+  E L +
Sbjct: 129 GLVEFPMEGESGFQDPSQGFILGLHDFRRAFTRFSISFGRMGDELNHLYLNYVPREELMR 188

Query: 203 ANRLLDEVKAKLN----SSEAELETTKAQLKEAKGHLADANFLAEEFRKTNEFYAMQDEI 257
           ANR L+E K +L     SS+ +++  KAQL EAK  L+DA  LAE+F KT EF  MQ++I
Sbjct: 189 ANRRLEEAKVELGLCQASSQVKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKI 248

[Close]

BLAST of Spg011128 vs. ExPASy TrEMBL
Match: A0A1S3C5B2 (uncharacterized protein LOC103497199 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497199 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 8.2e-11
Identity = 50/144 (34.72%), Postives = 75/144 (52.08%), Query Frame = 0


Query: 143 GIPSMRPKGELGVEDPAQ----GIRDVQQ----------------------YLRNERLDQ 202
           G+     +GE G +DP+Q    G+ D ++                      Y+  E L +
Sbjct: 190 GLVEFPMEGESGFQDPSQGFILGLHDFRRAFTRFSISFGRMGDELNHLYLNYVPREELMR 249

Query: 203 ANRLLDEVKAKLN----SSEAELETTKAQLKEAKGHLADANFLAEEFRKTNEFYAMQDEI 257
           ANR L+E K +L     SS+ +++  KAQL EAK  L+DA  LAE+F KT EF  MQ++I
Sbjct: 250 ANRRLEEAKVELGLCQASSQVKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKI 309

[Close]

BLAST of Spg011128 vs. ExPASy TrEMBL
Match: A0A1S4E2A9 (uncharacterized protein LOC103497199 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497199 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 8.2e-11
Identity = 50/144 (34.72%), Postives = 75/144 (52.08%), Query Frame = 0


Query: 143 GIPSMRPKGELGVEDPAQ----GIRDVQQ----------------------YLRNERLDQ 202
           G+     +GE G +DP+Q    G+ D ++                      Y+  E L +
Sbjct: 145 GLVEFPMEGESGFQDPSQGFILGLHDFRRAFTRFSISFGRMGDELNHLYLNYVPREELMR 204

Query: 203 ANRLLDEVKAKLN----SSEAELETTKAQLKEAKGHLADANFLAEEFRKTNEFYAMQDEI 257
           ANR L+E K +L     SS+ +++  KAQL EAK  L+DA  LAE+F KT EF  MQ++I
Sbjct: 205 ANRRLEEAKVELGLCQASSQVKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKI 264

[Close]

BLAST of Spg011128 vs. ExPASy TrEMBL
Match: A0A1S3C5V5 (uncharacterized protein LOC103497199 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497199 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 8.2e-11
Identity = 50/144 (34.72%), Postives = 75/144 (52.08%), Query Frame = 0


Query: 143 GIPSMRPKGELGVEDPAQ----GIRDVQQ----------------------YLRNERLDQ 202
           G+     +GE G +DP+Q    G+ D ++                      Y+  E L +
Sbjct: 157 GLVEFPMEGESGFQDPSQGFILGLHDFRRAFTRFSISFGRMGDELNHLYLNYVPREELMR 216

Query: 203 ANRLLDEVKAKLN----SSEAELETTKAQLKEAKGHLADANFLAEEFRKTNEFYAMQDEI 257
           ANR L+E K +L     SS+ +++  KAQL EAK  L+DA  LAE+F KT EF  MQ++I
Sbjct: 217 ANRRLEEAKVELGLCQASSQVKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFVVMQNKI 276

The following BLAST results are available for this feature:

BLAST of Spg011128 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01274.1	1.7e-10	34.72	Secretion protein HlyD family protein [Cucumis melo var. makuwa]	[more]
XP_016902110.1	1.7e-10	34.72	PREDICTED: uncharacterized protein LOC103497199 isoform X3 [Cucumis melo]	[more]
XP_008457530.1	1.7e-10	34.72	PREDICTED: uncharacterized protein LOC103497199 isoform X1 [Cucumis melo]	[more]
KAA0033890.1	1.7e-10	34.72	Secretion protein HlyD family protein [Cucumis melo var. makuwa]	[more]
XP_008457532.1	1.7e-10	34.72	PREDICTED: uncharacterized protein LOC103497199 isoform X2 [Cucumis melo]	[more]

BLAST of Spg011128 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg011128 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SSF9	8.2e-11	34.72	Secretion protein HlyD family protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3BQ22	8.2e-11	34.72	Secretion protein HlyD family protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3C5B2	8.2e-11	34.72	uncharacterized protein LOC103497199 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E2A9	8.2e-11	34.72	uncharacterized protein LOC103497199 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3C5V5	8.2e-11	34.72	uncharacterized protein LOC103497199 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Spg011128 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 174..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg011128.1	Spg011128.1	mRNA