Spg011058 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg011058
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold4: 27825039 .. 27827665 (-)
RNA-Seq ExpressionSpg011058
SyntenySpg011058
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATACAGTCCACACCTAGTAGAGCAATTCTCTAGTCTTACGTGCACGCAGAGCAAATCTCTCTCTATGTACTATGGAAACATATTCACACAGCACATGGGTAATCACCTAGGGTACGTAGAGCTAGCGAAGAAAAAACTATTTTTTCTGGTATGAATTCCTTTATTCAGAACTCATCTAAAATCATTTTCTCTTGTAAGATAACGTTTCATAAACACAAGCAACGTTTACAAATATCGAAGACATTCTAAAATTCCCAAATAAGCTCGCATTGTTTCGAATGCTTCTAAAATGCATGTTCCAACTAAGAAATCATAAAGCAAATTATGGAATTTAAATCGTTTCTCTAAAACATGCTTAACTCTAATTTTTCTCAAACTCATAAATATAGTACTTTTACTAGCGGAAAAATAATTATTAAAACAACCACTCATAGTCCTATTGATGAGAGAAATTCGGGTCGTAGGCTGTCCCGATCTCCGTTTGACCAAATTCGTTTAGGAAACTTCGTGGTTGAGCTTTATTCTCCAAAAATCGGTCCAAGCATCCTCTTCTCTCCTTCTCACGAGCTCAATCTCTCAATCTCACCCCCGACGACCTTTCTTCTCCTCCATTCTTTCTTTTTTTTTTCTCAAACTTCCTCTCTCTTCGTGGGTGACATTCCAGGCCTTTCTTTTCCTTTTTCTTTTTTTTTTTTGTTAAAACAAAGAAAATCAATTTGTTTGTGTGTGGTTTCAATGAGGCCCCACGTGCCTCTTTTTTAAAACAAAACAAACACCACCAGCCGATTCAGCTCCCCCATTTCTCTCTCTCTTTTTTTTTAAACAAATGCTAAAATGTGCTGGGCTTTACAATAATCAAATACATTCCAGATATCGTTCACCCTACTGATGAAGACGAAAAATAATAGTCATGAAACGTCTCTATCCTTAGAAAGCCTAAGTATTGGGTTTTCATAACTACTGTTATATATAGAAAGTCGATTAATTGTTTGATTATTTTCAAATTTAAACTTACTTCTTATGCAATCGTTGAGAGATTGGAGTGTATAATTTTTTTGCAATATTATTGATAGTGAAGGACAAAATGCGACTGCAATTGGGCAGCATTCTAGTGAAGGTCAAGCTGAGGCCGTGAATGATGAACAAGCTGATGTGCCCCTCGATCCATTGTTCGAGTATGACATTAGGGGATCCTCACCAGCTGCTGAAAGTTCTTCTTCGGAGGAGAGAAAGGATGAAGAGAAAATTGAAGAAAAAGAGGTCGAGACCTCTAGTGATAGTGAGACCGAGACAGATTCTGAAATAAAGGAATTGGACGATGATCAAATTCCAATTTCTTCTGCATTGAGGAAGAAGAGAAGAAGAGAACTCAGGGCTGAGAGGAGGACAAAGAATAAAAATGATCCCATATTCGTGAAAATGCCGAGGACTAGGTCCATGAACACCTCTCCTGTACTTCCTACTGCCACACCAGTCAAGCCAAAGGTTAAATGCCTAAAGTTACATCCCCAAAGAATCCATTCCTCGAGGTCTTTAAAGATATAAGTTTCGAAGAGAAGATGGAGATTATGAGGAAACGAGACTTCTTGAACGAGAAGGGATTCTCAAGCCGAGGAGGGACCTTGCATGACTTCGTAACAAAGGTCATCACCCAAAACAATGGCAAGAGTTTTGTGCTCACCGTCAAGAGGTCGTGGTGCCTCTAGTCCGAGAATTTTATGCAAGGTTGAGGGAAGAAAGCATGAGCTTGGCGATTGTAAGGGGAAAGATGGTGAGTTTTTCTTCGGTTGACATTAATAGGGTATATCGGATCAAAGCCCCTTTGCATCCGAAAGGGAACGATGCAATTAAAATTCCTTCGACCAAACAGTTAAAAGAAGCATTGAAGATAGTGGCCAGGAAGGGAGTTCAATGGAAGGAGTCTCAGACCAAAGTGAGACCCTTGTGCCAAGTGACTTAAAGCCAGAACGGGTAGTATGGCTTCACTTCATCAAAAACAGATTGATGCCCACCACCCATGATAGTACGATTTTAGTAGAGAGGGTCATGCTTCTCTTCAGCATAATGAAAGGGTTGGAGATCAATATAGGGAGCATCATCAAAGAAGAGATCCTATCTTGTGGGAGAAAGAGAGCAGGGAAGTTGTTTTTTGGGTCTCTCATAACCCAACTTTGTCAGAGAGTCAAGATTGTTCCTGGAAAAGATGAGGAATGACACTTTTTCAGGCCCACTATTGACTTGCCTCTGATAGGAAAGCTCCAGCAAAACAATGCTCAAAGGAAGGATAAGGCTTCCACATCCCATGCTACTCCATCTCCGGAGCCCACACCTGCTTCACCTCCAGCACACACTCCAGTTTCAGGGCCTACACCATCATCAGAGGCCCTTGCATTTGCCTACCGCCAGCTAGACCGCATTGAAGATAAATTAAAAACTTATTGGGTCTATGCGAAGGAAATAGATGAAGCAATTAGAGAGTTCTATCTCTCTACGCCCCAAACATCGCTCCTGTTTTCCCTGACTTTCCTCAAAACTTGCTGCCTTGAGAAGAAGAAGAGTCTGAAGAAGAAGATGAAGAAGTTGAAGAGAGTTCCTCAGAGGAGGAATATGGGACTTTCCTGA

mRNA sequence

ATGGAATACAGTCCACACCTAGTAGAGCAATTCTCTAGTCTTACGTGCACGCAGAGCAAATCTCTCTCTATGTACTATGGAAACATATTCACACAGCACATGGGTAATCACCTAGGTGAAGGACAAAATGCGACTGCAATTGGGCAGCATTCTAGTGAAGGTCAAGCTGAGGCCGTGAATGATGAACAAGCTGATGTGCCCCTCGATCCATTGTTCGAGTATGACATTAGGGGATCCTCACCAGCTGCTGAAAGTTCTTCTTCGGAGGAGAGAAAGGATGAAGAGAAAATTGAAGAAAAAGAGGTCGAGACCTCTAGTGATAGTGAGACCGAGACAGATTCTGAAATAAAGGAATTGGACGATGATCAAATTCCAATTTCTTCTGCATTGAGGAAGAAGAGAAGAAGAGAACTCAGGGCTGAGAGGAGGACAAAGAATAAAAATGATCCCATATTCGTGAAAATGCCGAGGACTAGGTCCATGAACACCTCTCCTGTACTTCCTACTGCCACACCAGTCAAGCCAAAGGTCGTGGTGCCTCTAGTCCGAGAATTTTATGCAAGGTTGAGGGAAGAAAGCATGAGCTTGGCGATTGTAAGGGGAAAGATGGTGAGTTTTTCTTCGGTTGACATTAATAGGGTATATCGGATCAAAGCCCCTTTGCATCCGAAAGGGAACGATGCAATTAAAATTCCTTCGACCAAACAGTTAAAAGAAGCATTGAAGATAGTGGCCAGGAAGGGAGTTCAATGGAAGGAGCCCACTATTGACTTGCCTCTGATAGGAAAGCTCCAGCAAAACAATGCTCAAAGGAAGGATAAGGCTTCCACATCCCATGCTACTCCATCTCCGGAGCCCACACCTGCTTCACCTCCAGCACACACTCCAGTTTCAGGGCCTACACCATCATCAGAGGCCCTTGCATTTGCCTACCGCCAGCTAGACCGCATTGAAGATAAATTAAAAACTTATTGGGTCTATGCGAAGGAAATAGATGAAGCAATTAGAGAGTTCTATCTCTCTACGCCCCAAACATCGCTCCTGTTTTCCCTGACTTTCCTCAAAACTTGCTGCCTTGAGAAGAAGAAGAGTCTGAAGAAGAAGATGAAGAAGTTGAAGAGAGTTCCTCAGAGGAGGAATATGGGACTTTCCTGA

Coding sequence (CDS)

ATGGAATACAGTCCACACCTAGTAGAGCAATTCTCTAGTCTTACGTGCACGCAGAGCAAATCTCTCTCTATGTACTATGGAAACATATTCACACAGCACATGGGTAATCACCTAGGTGAAGGACAAAATGCGACTGCAATTGGGCAGCATTCTAGTGAAGGTCAAGCTGAGGCCGTGAATGATGAACAAGCTGATGTGCCCCTCGATCCATTGTTCGAGTATGACATTAGGGGATCCTCACCAGCTGCTGAAAGTTCTTCTTCGGAGGAGAGAAAGGATGAAGAGAAAATTGAAGAAAAAGAGGTCGAGACCTCTAGTGATAGTGAGACCGAGACAGATTCTGAAATAAAGGAATTGGACGATGATCAAATTCCAATTTCTTCTGCATTGAGGAAGAAGAGAAGAAGAGAACTCAGGGCTGAGAGGAGGACAAAGAATAAAAATGATCCCATATTCGTGAAAATGCCGAGGACTAGGTCCATGAACACCTCTCCTGTACTTCCTACTGCCACACCAGTCAAGCCAAAGGTCGTGGTGCCTCTAGTCCGAGAATTTTATGCAAGGTTGAGGGAAGAAAGCATGAGCTTGGCGATTGTAAGGGGAAAGATGGTGAGTTTTTCTTCGGTTGACATTAATAGGGTATATCGGATCAAAGCCCCTTTGCATCCGAAAGGGAACGATGCAATTAAAATTCCTTCGACCAAACAGTTAAAAGAAGCATTGAAGATAGTGGCCAGGAAGGGAGTTCAATGGAAGGAGCCCACTATTGACTTGCCTCTGATAGGAAAGCTCCAGCAAAACAATGCTCAAAGGAAGGATAAGGCTTCCACATCCCATGCTACTCCATCTCCGGAGCCCACACCTGCTTCACCTCCAGCACACACTCCAGTTTCAGGGCCTACACCATCATCAGAGGCCCTTGCATTTGCCTACCGCCAGCTAGACCGCATTGAAGATAAATTAAAAACTTATTGGGTCTATGCGAAGGAAATAGATGAAGCAATTAGAGAGTTCTATCTCTCTACGCCCCAAACATCGCTCCTGTTTTCCCTGACTTTCCTCAAAACTTGCTGCCTTGAGAAGAAGAAGAGTCTGAAGAAGAAGATGAAGAAGTTGAAGAGAGTTCCTCAGAGGAGGAATATGGGACTTTCCTGA

Protein sequence

MEYSPHLVEQFSSLTCTQSKSLSMYYGNIFTQHMGNHLGEGQNATAIGQHSSEGQAEAVNDEQADVPLDPLFEYDIRGSSPAAESSSSEERKDEEKIEEKEVETSSDSETETDSEIKELDDDQIPISSALRKKRRRELRAERRTKNKNDPIFVKMPRTRSMNTSPVLPTATPVKPKVVVPLVREFYARLREESMSLAIVRGKMVSFSSVDINRVYRIKAPLHPKGNDAIKIPSTKQLKEALKIVARKGVQWKEPTIDLPLIGKLQQNNAQRKDKASTSHATPSPEPTPASPPAHTPVSGPTPSSEALAFAYRQLDRIEDKLKTYWVYAKEIDEAIREFYLSTPQTSLLFSLTFLKTCCLEKKKSLKKKMKKLKRVPQRRNMGLS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..302

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg011058.1Spg011058.1mRNA