Spg010996 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg010996
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Locationscaffold4: 25626107 .. 25631767 (+)
RNA-Seq ExpressionSpg010996
SyntenySpg010996
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGATGTTTTGAGCATTCTGGGGTGTACAAGTTTAATCAGAAGCTCTATTTCGTATGGTTGGAAAGCTTATTCAATTATCTACAACTTGCATGAAGAATGCGTGAGCCAAAAATGACTTGAAGTAGGTTTAATTTCAGGAGGAAGATAAAGGGTAACAGAGAAGCTCGAATCTGTGTTGTCTGATTTCGGGGCATTTCTGGACAAATTGGTTGGGAATCTCGTTTTAATTTCTTCAGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTGTATTTCATTAATTTTGGTTCAGTATTGAGGAAGTTGTAGGTGTTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAAAAGTAGAATGTGAATGTGATTCTTAATCCAATTGTTTAAAAATTCATGAGCATGGAAAGACAAAGCTATCTATGGTTCTAATACTCGGTTTTGGTTATTTGACAGGCCAAGAGGAAGTAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGTGAGTGACAAAATGAATTTCGAAAACGTTCTTAAACGGTTGTTCATGATTATATGTTTTACATGCTTTCCTATGAATGATACATGGTTTTTATGAACGGTTTCAAGCATGAGTTTTGAGCTCAGATTTTCTAATGAGGTTTATATACGAGCACGTGTCTAATGACTTTATGAAAAGTAGCTGAAACGATATCTTTTAAAGCAAAGTATGGATTAGCAAGTACTTCTAAATGATTTTCGGTTTTTCACGAGCAAACTGAGTAAGCTTAAGTTTTACAAAAGATAACGATAAGCAGGCATGTTTTAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCAAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTATTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCAGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAAATCGGTCATGTTAGTTAAAACGTTTGATGTACTTAATATGCCTTGCTAGATTTTTAATGACGAACTTGCGAAATGTTTTAGAAAGCCTCTATCCTTACACGTTTATGTTAAACGCTTTGACTGAGTATATTTATACGTTTAAAGGTTTATCACGTGTTTTGACTTCCAGATTTAGAGTTTTAAAATTAGTCACTCACTGGGCTTCGTAGCTCATTCTTCCAAAATGTTTTCCACTTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTCATATTGTAAATGTTTTGTAAGGGTTGTATAATATCGTCCTAGAGGTCGTGGATGTATAACCCTAGTTGTATATGTTTTGGTCGTGATATCTATATCAGGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTTCTGTGGATTCCGCTGTGTGGTGTTTCATATAGAATGTTGTATATCTATGATTAGTATGTTTATCAGGTTCAACGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGTGGACACAAGGACCCCCAAACCTTTTTTTTTTTTTTTTTTTAAAGAGAAGCTAAGGTCTATTGCTTTGGAAGATTATAAGGCTTGGGCAAAGAACTAGGAACAAGCTTTCCTAAGATTTAAGCTAAGTTAAGGAAGAAAATTATAAAGCTTCCTATCAACCTAGGGACTTAAAGCACAATAAGATAACTTGACTAAGCAAATAGGCTAAGATGCTAAGGATCAAAAGACATAATGCTACTATTGCAAATTAAAAAAGAATTTTTGGTCTTTGGGTGAGAGTGGCCTGCACGCCGACTCAATAAGCCTACCTTCTTGGGGACGAGACCGAGTGGGGGGCTGGGGACATGACAATACAAGATGAAATTCACTCCTTCCCACTTATAGGAGAAGTAGATGAGTGTTCCCTTAAGTGGTGACTCCGGGTCTTGAACAAAGGGATCCCGCCCTCTCATTGGCCCGAGAGGGACTTTCTGTTTACTGGTTGGACCATAAACAGGTTGTTCATTAGATGAGCACTGATACTTAAGGAGCCAGAGGTAACTCAAGGGTAAAACGGTAATTTGACCCAACTGAAGTTACGAACACTCGTGAAGGATTGACTTACCGTTATTGGTCAATATCCATGGACACATAAACATTCTACAGTGAGAAGAGTTCAGTTGTGGGTCTTTAATGGAATGACCCACAGTTAATGAATATTGGTTAACCCGATTAATGAGTTTAGTCGGTTAACTTCATATCATTGGAGCTTCTGATCTATAGGTCCATTAGGTCCCTCTGCTAGCTCGTAAAGAGTAATTGGGAACAATTTATCTTGAAAGAATTTGAATAGTTCAAATTCATCTTGGGAATAGAATTAATTATATGAGATACAATTAATATAATGTATAGTGATACATTATAATATAGTTTATTTTCTGATTAAACTTTAATGAGAGAATTATATATTTGAAAGAGTTCAAATATATATTCAATTAAATATATGATATTTAATTATTGAATTAATTAATTAATTATTCAATTTAGTTTTAAATTAAATGAGATTTAATTAAACTATAATCTATGAGGGAATTATTAGAATATGATTCTAATGTGTAATTAATTAAATATGGGCGATATTTAATTATGAAATTAATTAATTATTGGAATTAATTAATTAATTAGTTTAATTGAATTAATTAAATGCGTTTTAATTAAGTTTAATTAAACTATATATTATGTAAGGGAATTACATTTAAATAAGATTTAAATGTACATGGGATTAATTAATTAATATGATTAACATTTAATTAATTGATTTAATCAATTAATTAATTGATCTTGATCTAACGGTCAAGATTGTTTCCTAACCTCACATTAGGGTTTCCTCTCTTATAAAAGGAAAGGTTATGAGAACCCTAACCCTAAGGTCTCATTCTAGCCTCTCTCTCATATTCTCTCGACTCAAGAACTCTAGAGAGAATTTATCTCTCTAAGAGTTTTTCCCATACAAGATTAGGTAGTCCCACAACTACGTTCCTGATCTCAAAGAATAGCAGGGTAGCCTCGTGGTGGTGTCTGTTGAAGTATTCAAAGTCGTCAACACAACTACGTTCCTAATCTTAGAGAATAGCAGGGTAGCCTCGTGGTGGTGTCTGTTGAAGTATTCAGGGTCGTCAACGGAGGTATGTTTTTCACCGCTTAACTTTTTGCCAATGTATTGATATTTTGTAGAACAAAATTAATTTACGAACGGTCCAATTGCTTCCACTGTAACGGAATTGGGAATTCCAATCCTTCAATTGGTATCAGAGCCATGCCCCGAGAGTAGCCGTGTCGGGTAGAATCCTCGGGTGCCGAACAAAGAAGTTGTGAGCCTTGAAGTAGTCATGGGGAGATCCGTGGTTGAGCTTGATTGTTTGTTTCAGTTTGTTCAAAAATATTGTCGTAGATAATAATCAATCCAAGCATAAATTGACTTAATGAAGTAATACCTGGTGAGTCCAGGGTCGAGTCCACAGGGAAGGGATATTCACAAAGTCTTTATCAATATTTACTGATCTAAACTCAAAAACGTATGATATTATTTAAAAGGATAAGCAAAAGATTTAGTATATTTGAAAAGTAAATACTTGCGTAAAACAACACATGCGATGAGAATGAAAGGAAAATTTGTAAGGAGAATATAATCAAGGCTGTTGCGGTTGCAACCTCATGCGTTTATAATAACCTTGCAGCGCATACTTTGATTAATTGATCAATTAATGCCTAAGTGAGAAAAAAATCATATGTTTCCCTTCCGGTACTCCTTTGCGTTTGGCATAAAACTATCAAGAGGTTATTTGGCTAGTTCATGCTTTAGGCGTAGTTCTCTAAAACTTACAAGGAACTGCGTTAGTCACAACGCAGTCTAAGCTCATGCGTGCACTATCTTTTAGCAGTAGTGTTTTAATGCTACCAAGACTACATGACATGTGCTAACTTGCTCTACTTAGAGATGTCTGCATGCGTTACCTGTCAGGGATTTAGAATGCTGCTACTGCATCCGGCTGGCCAAGCGGGAGTTAGTAATGAAAATAGTATTGCAACTAAATAGAAAGCAATTAATGTTTCATTTAACTCAAAATATGCGCTTACAAAATATACTTATCACTGCATGAGGTGCTTGCGCTAAGCCTTGAAGAAAAATTTAGCTCATGCGAGCAAGACAAGACATCATGAAATAGAACATTACAAACTCAAGTTTGCTTCGAATCACAGCTCTCAGTGATTTTTCTGAAGATCTTCCTTCTTCTTCTCTTGATCTCCCCCCAAAATTCCTCTCTTATGCCTGAGAGTGTGCCTTCTATTTATAGGTGAGGGAAGATGACTTCTCTAAGTAATCATCAACTTGTGTTAATCATCATTTAGGCAACTTGCTTAACTTTTCATCCCTTTTTCCGCCCACTTGCGCTAGTTGTGTCAGCGCTTGTCTTTTCATCATCTTATCTTTCTCTTGATCATCTTGGAATGTGTGCCTGCACTGAGAAGGAACTAAAACAAACAACTGAATTAGCTTGCGTTAATGCCCTATATTTTATAATTTCTCGCCGCATACATGAATATAGCTCGCCGCATGAAATCATTACATTTTCCTTTCTTTTTGTGCTGAAGTAAAGCATCTTTGTTTCTTTTGGCCTTGTTTTAATCTAAGTTTAAAGGACTAATAACTTGCTTTTTGCAAGTTATCAAACCCCCAAACTTAAACTATTGCTTGTCCTCAAGCAATGCCTATTATCAACTCTGCGATAGTTACTCAGCTCTTCTTTGCTTGCGATCTTGGCATCCTCTTTCCTCTTTTTCTTGCGCGCATCATTAAACCAGGTTAACTTTTGCCAAATTTCCTTCATTACTTAAAGAAAGCTCCTTGCGCTAAGATTCTTCCTTGCGTTAACTCAGCCAATCTTCTCCTGCATGTCCTGGGCGCATAATGATTCTATATATATATATATATTATTATTGTTTTTAGAAAGCAATTAATGGTAACACTAGACATCAAAACGCATGCTTTCGTTTTGGCTTACCCACATTTGTGATGAAAGGTATCCAACTTCGGGCATTCCATTTTTTACTGTCCTCAACGCTCATGGGTTGCGTTTGTCTTCGCGCAGTGGCAAACTATGGGTGTCATAAATGCCCCTGGCTACAAACATGCCGCTTTCCAGAGGAACGCATGTATTATTTTATTAATCTATGCGCTAGCTCCCCCAAACTTAAATCGGACAATGCCCTCATTGTCCCCCAAACTTACTCTGGAGCGCATGGACTGAAAGAGATCAAGGCTGAGGTGCGGCAAGTCGAAAATGCGAAGGGATTTTCCTTAAGGTCTGAGGAAATGAAGACAAAGGTTAAACCAATTTAA

mRNA sequence

ATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGCCAAGAGGAAGTAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGTGAGTGACAAAATGAATTTCGAAAACGTTCTTAAACGGTTGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAAATCGGTCATGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTACTTTCCAAACCAGGTTCAACGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGTGGTGACTCCGGGTCTTGAACAAAGGGATCCCGCCCTCTCATTGGCCCGAGAGGGACTTTCTGTTTACTGGTTGGACCATAAACAGGGTAGCCTCGTGGTGGTGTCTGTTGAAGTATTCAAAGTCGTCAACACAACTACGTTCCTAATCTTAGAGAATAGCAGGGTAGCCTCGTGGTGGTGTCTGTTGAAGTATTCAGGGTCGTCAACGGAGAGATGTCTGCATGCGTTACCTGTCAGGGATTTAGAATGCTGCTACTGCATCCGGCTGGCCAAGCGGGAGTTAGCAACTTGCTTAACTTTTCATCCCTTTTTCCGCCCACTTGCGCTAGTTGTGTCAGCGCTTGTCTTTTCATCATCTTATCTTTCTCTTGATCATCTTGGAATCTCCCCCAAACTTAAATCGGACAATGCCCTCATTGTCCCCCAAACTTACTCTGGAGCGCATGGACTGAAAGAGATCAAGGCTGAGGTGCGGCAAGTCGAAAATGCGAAGGGATTTTCCTTAAGGTCTGAGGAAATGAAGACAAAGGTTAAACCAATTTAA

Coding sequence (CDS)

ATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGCCAAGAGGAAGTAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGTGAGTGACAAAATGAATTTCGAAAACGTTCTTAAACGGTTGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAAATCGGTCATGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTACTTTCCAAACCAGGTTCAACGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGTGGTGACTCCGGGTCTTGAACAAAGGGATCCCGCCCTCTCATTGGCCCGAGAGGGACTTTCTGTTTACTGGTTGGACCATAAACAGGGTAGCCTCGTGGTGGTGTCTGTTGAAGTATTCAAAGTCGTCAACACAACTACGTTCCTAATCTTAGAGAATAGCAGGGTAGCCTCGTGGTGGTGTCTGTTGAAGTATTCAGGGTCGTCAACGGAGAGATGTCTGCATGCGTTACCTGTCAGGGATTTAGAATGCTGCTACTGCATCCGGCTGGCCAAGCGGGAGTTAGCAACTTGCTTAACTTTTCATCCCTTTTTCCGCCCACTTGCGCTAGTTGTGTCAGCGCTTGTCTTTTCATCATCTTATCTTTCTCTTGATCATCTTGGAATCTCCCCCAAACTTAAATCGGACAATGCCCTCATTGTCCCCCAAACTTACTCTGGAGCGCATGGACTGAAAGAGATCAAGGCTGAGGTGCGGCAAGTCGAAAATGCGAAGGGATTTTCCTTAAGGTCTGAGGAAATGAAGACAAAGGTTAAACCAATTTAA

Protein sequence

MENRAQDFRAKQEDLWPRGSRSSLQTGELDKTVSDKMNFENVLKRLPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRKSVMLVEIELPVPDTLPTSAESSRSSSSTWLELYIESVTFQTRFNVSVGSTGIVRGDDVCWLHAVFRAKLAVVTPGLEQRDPALSLAREGLSVYWLDHKQGSLVVVSVEVFKVVNTTTFLILENSRVASWWCLLKYSGSSTERCLHALPVRDLECCYCIRLAKRELATCLTFHPFFRPLALVVSALVFSSSYLSLDHLGISPKLKSDNALIVPQTYSGAHGLKEIKAEVRQVENAKGFSLRSEEMKTKVKPI
Homology
[Close]
BLAST of Spg010996 vs. NCBI nr
Match: KAA0065516.1 (uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 159.1 bits (401), Expect = 6.7e-35
Identity = 89/151 (58.94%), Postives = 98/151 (64.90%), Query Frame = 0 

Query: 15  LWPRGSRSSLQTGELDKTVSDKMNFENVLKRL--------PHYDKDDGSAGRAPLHRRTS 74
           +WPRG+RSSLQTGELDKTV   ++  +VL+          PHYDKDDG+A RAPLHRRTS
Sbjct: 518 VWPRGNRSSLQTGELDKTVRFSLSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPLHRRTS 577

Query: 75  KRWLYWACPTQRKSVML----------VEIELPVPDTLPTSAESSRSSSSTWLELYIESV 134
           KRWLYWACPT R+SVML          VEIEL VPDTLPTSAESS S+S           
Sbjct: 578 KRWLYWACPTPRRSVMLVKTFDVLVMPVEIELSVPDTLPTSAESSESNSR---------- 637

Query: 135 TFQTRFNVSVGSTGIVRGDDVCWLHAVFRAK 148
                      S GIVRGDDVCWLH VFRAK
Sbjct: 638 -----------SAGIVRGDDVCWLHVVFRAK 647

[Close]
BLAST of Spg010996 vs. NCBI nr
Match: TYJ98800.1 (uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 159.1 bits (401), Expect = 6.7e-35
Identity = 89/151 (58.94%), Postives = 98/151 (64.90%), Query Frame = 0 

Query: 15  LWPRGSRSSLQTGELDKTVSDKMNFENVLKRL--------PHYDKDDGSAGRAPLHRRTS 74
           +WPRG+RSSLQTGELDKTV   ++  +VL+          PHYDKDDG+A RAPLHRRTS
Sbjct: 104 VWPRGNRSSLQTGELDKTVRFSLSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPLHRRTS 163

Query: 75  KRWLYWACPTQRKSVML----------VEIELPVPDTLPTSAESSRSSSSTWLELYIESV 134
           KRWLYWACPT R+SVML          VEIEL VPDTLPTSAESS S+S           
Sbjct: 164 KRWLYWACPTPRRSVMLVKTFDVLVMPVEIELSVPDTLPTSAESSESNSR---------- 223

Query: 135 TFQTRFNVSVGSTGIVRGDDVCWLHAVFRAK 148
                      S GIVRGDDVCWLH VFRAK
Sbjct: 224 -----------SAGIVRGDDVCWLHVVFRAK 233

[Close]
BLAST of Spg010996 vs. NCBI nr
Match: KAA0037581.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 119.8 bits (299), Expect = 4.5e-23
Identity = 79/148 (53.38%), Postives = 92/148 (62.16%), Query Frame = 0 

Query: 17  PRGSRSSLQTGELDKTVSDKMNFENVLKRLPHYDKDD-GSAGRAPLHRRTSKRWLYWACP 76
           PRG+R SLQT E+DKTV   ++  +VL      D D   SAG+APL +R   RW     P
Sbjct: 83  PRGNRLSLQTEEIDKTVIFPLSTLSVLS-----DNDAVVSAGQAPLRQR---RWECRTGP 142

Query: 77  T----QRKSVMLVEIELPVPDTLPTSAESSRSSSSTWLELYIESVTFQTRFNV------- 136
           T    +  S  LVEIELPVPD LPTSAESSRS+SSTWLELY ESV  +  + V       
Sbjct: 143 TTSFFKMFSTFLVEIELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVILQTKRC 202

Query: 137 ---SVGSTGIVRGDDVCWLHAVFRAKLA 150
               + S  IVRGDDVCWLHA+FRAK A
Sbjct: 203 QGCILWSAWIVRGDDVCWLHAIFRAKTA 222

[Close]
BLAST of Spg010996 vs. NCBI nr
Match: TYK03091.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 119.8 bits (299), Expect = 4.5e-23
Identity = 79/148 (53.38%), Postives = 92/148 (62.16%), Query Frame = 0 

Query: 17  PRGSRSSLQTGELDKTVSDKMNFENVLKRLPHYDKDD-GSAGRAPLHRRTSKRWLYWACP 76
           PRG+R SLQT E+DKTV   ++  +VL      D D   SAG+APL +R   RW     P
Sbjct: 83  PRGNRLSLQTEEIDKTVIFPLSTLSVLS-----DNDAVVSAGQAPLRQR---RWECRTGP 142

Query: 77  T----QRKSVMLVEIELPVPDTLPTSAESSRSSSSTWLELYIESVTFQTRFNV------- 136
           T    +  S  LVEIELPVPD LPTSAESSRS+SSTWLELY ESV  +  + V       
Sbjct: 143 TTSFFKMFSTFLVEIELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVILQTKRC 202

Query: 137 ---SVGSTGIVRGDDVCWLHAVFRAKLA 150
               + S  IVRGDDVCWLHA+FRAK A
Sbjct: 203 QGCILWSAWIVRGDDVCWLHAIFRAKTA 222

[Close]
BLAST of Spg010996 vs. NCBI nr
Match: TYK11835.1 (uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa])

HSP 1 Score: 113.2 bits (282), Expect = 4.2e-21
Identity = 75/147 (51.02%), Postives = 84/147 (57.14%), Query Frame = 0 

Query: 15  LWPRGSRSSLQTGELDKTVSDKMNFENVLKRLPHYDKDDGSAGRAPLHRRTSKRWLYWAC 74
           L PRG+R SLQTGELDKTV   ++  +VL+        D +A                  
Sbjct: 61  LGPRGNRLSLQTGELDKTVIFSLSTLSVLR--------DNNA------------------ 120

Query: 75  PTQRKSVMLVEIELPVPDTLPTSAESSRSSSSTWLELYIESV------TFQTR------- 134
                      IELPVPDTLPTSAESS S+SSTWLELY ESV      +F  +       
Sbjct: 121 ----------VIELPVPDTLPTSAESSGSNSSTWLELYFESVHVEMFCSFTNQVMSELHL 171

Query: 135 -FNVSVGSTGIVRGDDVCWLHAVFRAK 148
            FNVSVGSTGIVRGDDVCWLHAVFRAK
Sbjct: 181 VFNVSVGSTGIVRGDDVCWLHAVFRAK 171

[Close]
BLAST of Spg010996 vs. ExPASy TrEMBL
Match: A0A5A7VGQ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold638G00090 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.2e-35
Identity = 89/151 (58.94%), Postives = 98/151 (64.90%), Query Frame = 0 

Query: 15  LWPRGSRSSLQTGELDKTVSDKMNFENVLKRL--------PHYDKDDGSAGRAPLHRRTS 74
           +WPRG+RSSLQTGELDKTV   ++  +VL+          PHYDKDDG+A RAPLHRRTS
Sbjct: 518 VWPRGNRSSLQTGELDKTVRFSLSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPLHRRTS 577

Query: 75  KRWLYWACPTQRKSVML----------VEIELPVPDTLPTSAESSRSSSSTWLELYIESV 134
           KRWLYWACPT R+SVML          VEIEL VPDTLPTSAESS S+S           
Sbjct: 578 KRWLYWACPTPRRSVMLVKTFDVLVMPVEIELSVPDTLPTSAESSESNSR---------- 637

Query: 135 TFQTRFNVSVGSTGIVRGDDVCWLHAVFRAK 148
                      S GIVRGDDVCWLH VFRAK
Sbjct: 638 -----------SAGIVRGDDVCWLHVVFRAK 647

[Close]
BLAST of Spg010996 vs. ExPASy TrEMBL
Match: A0A5D3BG85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1625G00140 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.2e-35
Identity = 89/151 (58.94%), Postives = 98/151 (64.90%), Query Frame = 0 

Query: 15  LWPRGSRSSLQTGELDKTVSDKMNFENVLKRL--------PHYDKDDGSAGRAPLHRRTS 74
           +WPRG+RSSLQTGELDKTV   ++  +VL+          PHYDKDDG+A RAPLHRRTS
Sbjct: 104 VWPRGNRSSLQTGELDKTVRFSLSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPLHRRTS 163

Query: 75  KRWLYWACPTQRKSVML----------VEIELPVPDTLPTSAESSRSSSSTWLELYIESV 134
           KRWLYWACPT R+SVML          VEIEL VPDTLPTSAESS S+S           
Sbjct: 164 KRWLYWACPTPRRSVMLVKTFDVLVMPVEIELSVPDTLPTSAESSESNSR---------- 223

Query: 135 TFQTRFNVSVGSTGIVRGDDVCWLHAVFRAK 148
                      S GIVRGDDVCWLH VFRAK
Sbjct: 224 -----------SAGIVRGDDVCWLHVVFRAK 233

[Close]
BLAST of Spg010996 vs. ExPASy TrEMBL
Match: A0A5D3BTP3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00020 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-23
Identity = 79/148 (53.38%), Postives = 92/148 (62.16%), Query Frame = 0 

Query: 17  PRGSRSSLQTGELDKTVSDKMNFENVLKRLPHYDKDD-GSAGRAPLHRRTSKRWLYWACP 76
           PRG+R SLQT E+DKTV   ++  +VL      D D   SAG+APL +R   RW     P
Sbjct: 83  PRGNRLSLQTEEIDKTVIFPLSTLSVLS-----DNDAVVSAGQAPLRQR---RWECRTGP 142

Query: 77  T----QRKSVMLVEIELPVPDTLPTSAESSRSSSSTWLELYIESVTFQTRFNV------- 136
           T    +  S  LVEIELPVPD LPTSAESSRS+SSTWLELY ESV  +  + V       
Sbjct: 143 TTSFFKMFSTFLVEIELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVILQTKRC 202

Query: 137 ---SVGSTGIVRGDDVCWLHAVFRAKLA 150
               + S  IVRGDDVCWLHA+FRAK A
Sbjct: 203 QGCILWSAWIVRGDDVCWLHAIFRAKTA 222

[Close]
BLAST of Spg010996 vs. ExPASy TrEMBL
Match: A0A5A7T7M6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002250 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-23
Identity = 79/148 (53.38%), Postives = 92/148 (62.16%), Query Frame = 0 

Query: 17  PRGSRSSLQTGELDKTVSDKMNFENVLKRLPHYDKDD-GSAGRAPLHRRTSKRWLYWACP 76
           PRG+R SLQT E+DKTV   ++  +VL      D D   SAG+APL +R   RW     P
Sbjct: 83  PRGNRLSLQTEEIDKTVIFPLSTLSVLS-----DNDAVVSAGQAPLRQR---RWECRTGP 142

Query: 77  T----QRKSVMLVEIELPVPDTLPTSAESSRSSSSTWLELYIESVTFQTRFNV------- 136
           T    +  S  LVEIELPVPD LPTSAESSRS+SSTWLELY ESV  +  + V       
Sbjct: 143 TTSFFKMFSTFLVEIELPVPDILPTSAESSRSNSSTWLELYFESVHVEMFYKVILQTKRC 202

Query: 137 ---SVGSTGIVRGDDVCWLHAVFRAKLA 150
               + S  IVRGDDVCWLHA+FRAK A
Sbjct: 203 QGCILWSAWIVRGDDVCWLHAIFRAKTA 222

[Close]
BLAST of Spg010996 vs. ExPASy TrEMBL
Match: A0A5D3CJX3 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00520 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.0e-21
Identity = 75/147 (51.02%), Postives = 84/147 (57.14%), Query Frame = 0 

Query: 15  LWPRGSRSSLQTGELDKTVSDKMNFENVLKRLPHYDKDDGSAGRAPLHRRTSKRWLYWAC 74
           L PRG+R SLQTGELDKTV   ++  +VL+        D +A                  
Sbjct: 61  LGPRGNRLSLQTGELDKTVIFSLSTLSVLR--------DNNA------------------ 120

Query: 75  PTQRKSVMLVEIELPVPDTLPTSAESSRSSSSTWLELYIESV------TFQTR------- 134
                      IELPVPDTLPTSAESS S+SSTWLELY ESV      +F  +       
Sbjct: 121 ----------VIELPVPDTLPTSAESSGSNSSTWLELYFESVHVEMFCSFTNQVMSELHL 171

Query: 135 -FNVSVGSTGIVRGDDVCWLHAVFRAK 148
            FNVSVGSTGIVRGDDVCWLHAVFRAK
Sbjct: 181 VFNVSVGSTGIVRGDDVCWLHAVFRAK 171

The following BLAST results are available for this feature:
BLAST of Spg010996 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0065516.16.7e-3558.94uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa][more]
TYJ98800.16.7e-3558.94uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa][more]
KAA0037581.14.5e-2353.38reverse transcriptase [Cucumis melo var. makuwa][more]
TYK03091.14.5e-2353.38reverse transcriptase [Cucumis melo var. makuwa][more]
TYK11835.14.2e-2151.02uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa][more]
BLAST of Spg010996 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg010996 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VGQ53.2e-3558.94Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BG853.2e-3558.94Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BTP32.2e-2353.38Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37... [more]
A0A5A7T7M62.2e-2353.38Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27... [more]
A0A5D3CJX32.0e-2151.02CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
BLAST of Spg010996 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg010996.1Spg010996.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043170 macromolecule metabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0044238 primary metabolic process
molecular_function GO:0005488 binding
molecular_function GO:0016787 hydrolase activity