Spg010944 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg010944
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold10: 8289118 .. 8292422 (+)
RNA-Seq Expression	Spg010944
Synteny	Spg010944

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGGAAATAGAGGCAGAGCCTCATCCTCAAGGGGCAGTCGCCCATCTTCTTCTTCTCCAGCACCTCCTCCTACGAGTGCTGATCAATATGCTATGGATTTAGGGTTTACTCCGGTAACCCGATCCAGGTCAAGGCAAGGCGGTATTCGCCCGATGCCTCCAATGGAGTCTTCTACTCCACCTCCACGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAGTTGTTCAATTGAGACCTCCTGTCTCTCCTTCCTCAATAACAGGATCATCGATCCCATCGTCATCAACTTATTCTCAGGCAGTTGTACCTGAAAAGAGGTTTGTACCTCGTCCTGAGATTAAGTCTAATTTTCAAAAGTCCCAGGTCATCTATGAACCTATCATAGAACCTGAATTCCAAGGTCTCAACCTTGACGAGACCATTTCAAACATGTATCCTACAGGTTTTAATTTCATGCCTGAGGATCTAAACAAAACAAGAACCTTTTACGAGTTTATCTTAGTTGACACCAAGTCAGCAGAGATAACTCACATTCCGGACAAAAATGATCCATCAAAAATCAGTTACTCAAAGCTTAAAATCTTCAAAGCCTTGAATCCAACCCACTGGAATCAAGGATTATACACCGACAAATCCTTCTCAAAACCTTTTGTACCACAAACATATTCATATCGGGACTACATAAGAGCCTGGTATAATGTAATGTGGTATTCACCATTCAAACATTCATGGTTCATATCCTTTTGTCCAAACTCGTACAAAATTACTTTTCCTTTATGGTTCATTCAATGGTGGAATACATTCGGTTTGACGGATGATATTTTACCAACACCCTTGCAAGAATCATATTATCATTTTGCAAGGAACATTAAAAAAACAGCGTTTCATAACTCTATGAGATTCTGTTTATACTTTCAAATTCCTTGGATCTTTTGCTGGAACTTTTCGACCAGCAATCAACCTCAGTACAAGACTGTCACCAAGATCCTAAAGATCAAATGGTGGGACAAATTCAATTTCCAGAACGCCACCCTTAACAAAGTAAAGGAGTGGTTTGCAGCAAATGGATATCTCCAAGATATTGATATCAAAAGAAATGCAGAATTTCTAAATGACAAATCCAAGCTTCTGGCAGCTCTTGCTCAGACTACATCTGATGCAGACTTCCAGAGAATATTGCAGATGGCAGCTTCAGACAGAAGCACATCTCCAGCTTCTTTAGCACAAGAAGGAGAAGAAAGCAAACCAGACTACGACCTGGACGACCCATTCCTCGACTCACAACCTATGTGAGCTCCGAGTCAAAATGACCTGTTTCACAAAGAGACAGTCAGTATGTTTAAGGAATACTTCAAAAGGAAGTAATTCCGTCAAATTAAAAAAAAAAAAAAGTGTTGTAAATTCTCTTCTTTAGTGCTAAGATGTGTAAACTCTGTAAATAATCTAGTTTACACTGTAAATACATTTCTGCTAAAGCACAGCTTTAGAAGAAGAAGCAGCAGTGCGATCAAGGTCAAAGATCCTATATTTTGAAGACGAAGATAGTTGGCAATTGTCCTGAAAATCGTGAGGACCTAGTTTGGTGTTCCCGGCCGTAAGTCTCGCAAATGTTTAAGAGCAGTGAGTCCGTTGGTAAGCCTGTAATTCGCCTAGGGTGATCGAGGATTAGGAGAAACGCCAATTATTCAGCCAACAAGATAAAGAATCTTATCTTCTGACAAGAGATAAAGCTGAAGCCTCTTTTAAGCTGTAAAGAAGAAGACAAGCTACTTTTTCTTTATTACTTTTCTTATTTTGTCTTTTGTAATTATTTGCTTTAATAATTGTGCTTTAGTCATATCTATCCGCTCAGGGGTCCTGTCCTGTCGGATTAATTATGTAGTTTTACTTTTTCAATTTTGTCGTTATTACTTTTCAAAAGACGAATCTATCAGGGGTCCTGTCCTGACGATTCGATCTTATCTTTTAATTTTCCGCATTCAATTATCATTTGAAATCTGGGGTCTATAAAAGACTTCCATCCTGTATTTCAAAAGCATGCGCTGAGAACTCTCAAGCTATCTTCACTATTCACCCCCCTAGGGTTGCTATGTCGATCCAACATCAACCACATGTGGGATAGGATTTTAATTTTAACTTTCTAGTTTTTTTTTTTGTTTTTTTTTTGTTTTTTTTTTATTTTTAACAACATGTGGGGGTGGGAGTATTTGAACCACATACCTCTTGGTCATTAGTACACACTTATGCCAGTTGAGCTATGCTCATGTTGGCTTTACTTTTCTAGCTGATAAGTTGGACTTCAAGATGAAATATTTTCTTATACATCATATAAATACTACTCTCATATATTGTCAGCTTCAACCATATCCTTAAAGTATTATTTATGAAGCAAAATTTATAATATAAACTAGGAAATATGCATTGTTGTCTCCTAATAAGCTTTGTAACATTTTACTCACCTTGCCAAGTTTAAAGATAAAAATTATTTTTTCCTCATTTTTCTTAATTGTGACGCCCCATGCATTTTAGTGCAATTAATTCCATGTATTTTTTCAAATTGAAATGCAAATTTTTATTTGGCTTGTATTTTGGAATTTATATTAAGCACCATGACACTTGGGTAATTATTCTTGGAATATAAGCGTTAATTAATTCCCTCTCTAAAGCTCGATTAAGTTGGTTGACATTTGTTATTGGGTCAGTTAAAGCGTTGAAAGCTTCACGCTGATTGAAGGGTGTTGGTTTGAAAATTCCTATTGTTGGGATCCTATTCTTGGGTTTTTGTGATTAAAGGAAATAAAGAAAAGAAAATGAATTAAGAAAAAAAAAACCCTAGCCTTCTTCTCTCTTTCTCGCTTTTATGCAGCCCCCCCTCGCGTGTGTGTAGCCGTCGGACAACCCAGCCGCGCCGCCCATCCCTCCGTCTTCCCTTCTTTTCACGCCACCGTCGAGGGACCCAGCCGTCGTGAGTGTCATCGCCAGTTCGATATCGCTGTCGCGCCGTCCTCCCGATCCCTCTCGTGGTGTGTCGTCGGTAGCAAGGACCCGCGCCGTCTCCCTCTCTTTTTCATCGATCGACCAAAGGAAAGATCATGGGTAAGCCTCTTCTCCTCATTCTTAGTCGATTTAAGGCCGACTAACCCCCTTCACTCTCGTTTCAGTCAATTTTGTGTGTGTCCAGCAAGTTGAATCCCATCTTTCGCGCGGTTTCGCCTCTGTCCAGCGGTGTTTTGGATCCGTTTTGGACCATCACGACATCATTTAACGATTCCGATGAGTTTAAGCAGTTACCCATTCTT

mRNA sequence

ATGAGCGGAAATAGAGGCAGAGCCTCATCCTCAAGGGGCAGTCGCCCATCTTCTTCTTCTCCAGCACCTCCTCCTACGAGTGCTGATCAATATGCTATGGATTTAGGGTTTACTCCGGTAACCCGATCCAGGTCAAGGCAAGGCGGTATTCGCCCGATGCCTCCAATGGAGTCTTCTACTCCACCTCCACGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAGTTGTTCAATTGAGACCTCCTGTCTCTCCTTCCTCAATAACAGGATCATCGATCCCATCGTCATCAACTTATTCTCAGGCAGTTGTACCTGAAAAGAGGTTTGTACCTCGTCCTGAGATTAAGTCTAATTTTCAAAAGTCCCAGGTCATCTATGAACCTATCATAGAACCTGAATTCCAAGGTCTCAACCTTGACGAGACCATTTCAAACATGTATCCTACAGAATTTCTAAATGACAAATCCAAGCTTCTGGCAGCTCTTGCTCAGACTACATCTGATGCAGACTTCCAGAGAATATTGCAGATGGCAGCTTCAGACAGAAGCACATCTCCAGCTTCTTTAGCACAAGAAGGAGAAGAAAGCAAACCAGACTACGACCTGGACGACCCATTCCTCGACTCACAACCTATCACAGCTTTAGAAGAAGAAGCAGCAGTGCGATCAAGAGCAGTGAGTCCGTTGCCGTCGGACAACCCAGCCGCGCCGCCCATCCCTCCGTCTTCCCTTCTTTTCACGCCACCGTCGAGGGACCCAGCCGTCGTGAGTGTCATCGCCAGTTCGATATCGCTGTCGCGCCGTCCTCCCGATCCCTCTCGTGGTGTGTCGTCGGTAGCAAGGACCCGCGCCGTCTCCCTCTCTTTTTCATCGATCGACCAAAGGAAAGATCATGGCAAGTTGAATCCCATCTTTCGCGCGGTTTCGCCTCTGTCCAGCGGTGTTTTGGATCCGTTTTGGACCATCACGACATCATTTAACGATTCCGATGAGTTTAAGCAGTTACCCATTCTT

Coding sequence (CDS)

ATGAGCGGAAATAGAGGCAGAGCCTCATCCTCAAGGGGCAGTCGCCCATCTTCTTCTTCTCCAGCACCTCCTCCTACGAGTGCTGATCAATATGCTATGGATTTAGGGTTTACTCCGGTAACCCGATCCAGGTCAAGGCAAGGCGGTATTCGCCCGATGCCTCCAATGGAGTCTTCTACTCCACCTCCACGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAGTTGTTCAATTGAGACCTCCTGTCTCTCCTTCCTCAATAACAGGATCATCGATCCCATCGTCATCAACTTATTCTCAGGCAGTTGTACCTGAAAAGAGGTTTGTACCTCGTCCTGAGATTAAGTCTAATTTTCAAAAGTCCCAGGTCATCTATGAACCTATCATAGAACCTGAATTCCAAGGTCTCAACCTTGACGAGACCATTTCAAACATGTATCCTACAGAATTTCTAAATGACAAATCCAAGCTTCTGGCAGCTCTTGCTCAGACTACATCTGATGCAGACTTCCAGAGAATATTGCAGATGGCAGCTTCAGACAGAAGCACATCTCCAGCTTCTTTAGCACAAGAAGGAGAAGAAAGCAAACCAGACTACGACCTGGACGACCCATTCCTCGACTCACAACCTATCACAGCTTTAGAAGAAGAAGCAGCAGTGCGATCAAGAGCAGTGAGTCCGTTGCCGTCGGACAACCCAGCCGCGCCGCCCATCCCTCCGTCTTCCCTTCTTTTCACGCCACCGTCGAGGGACCCAGCCGTCGTGAGTGTCATCGCCAGTTCGATATCGCTGTCGCGCCGTCCTCCCGATCCCTCTCGTGGTGTGTCGTCGGTAGCAAGGACCCGCGCCGTCTCCCTCTCTTTTTCATCGATCGACCAAAGGAAAGATCATGGCAAGTTGAATCCCATCTTTCGCGCGGTTTCGCCTCTGTCCAGCGGTGTTTTGGATCCGTTTTGGACCATCACGACATCATTTAACGATTCCGATGAGTTTAAGCAGTTACCCATTCTT

Protein sequence

MSGNRGRASSSRGSRPSSSSPAPPPTSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPPRPSANLVRPSGGVVQLRPPVSPSSITGSSIPSSSTYSQAVVPEKRFVPRPEIKSNFQKSQVIYEPIIEPEFQGLNLDETISNMYPTEFLNDKSKLLAALAQTTSDADFQRILQMAASDRSTSPASLAQEGEESKPDYDLDDPFLDSQPITALEEEAAVRSRAVSPLPSDNPAAPPIPPSSLLFTPPSRDPAVVSVIASSISLSRRPPDPSRGVSSVARTRAVSLSFSSIDQRKDHGKLNPIFRAVSPLSSGVLDPFWTITTSFNDSDEFKQLPIL

Homology

[Close]

BLAST of Spg010944 vs. NCBI nr
Match: TYJ98361.1 (hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 180.3 bits (456), Expect = 2.9e-41
Identity = 117/211 (55.45%), Postives = 143/211 (67.77%), Query Frame = 0


Query: 5   RGRASSSRGSRPSSSS-PAPPPTSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPP 64
           R  ++SS+G+ PSSSS  AP P S DQYAMDLG+T V +SRS+  GI    PMESST PP
Sbjct: 11  RTNSTSSKGNCPSSSSNSAPSPMSVDQYAMDLGYTTVIQSRSKSSGIWIRSPMESST-PP 70

Query: 65  RPSANLVRPSGGVVQLRPPVSPSSITGSSIPSSSTYSQAVVPEKRFVPRPEIKSNFQKSQ 124
           RPS NL+ P G V+Q+R   SPSS   SS    +TYSQAV P+K+FVPR EIKS FQK  
Sbjct: 71  RPSVNLIHPFGEVIQMRSSASPSSNRESS-TLPTTYSQAVTPDKQFVPRIEIKSYFQKPI 130

Query: 125 VIYEPIIEPEFQGLNLDETISNMYPTEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS 184
           VIY+PIIE E+Q     + I      +FLNDK K LAAL Q T DADFQR+L  A +  S
Sbjct: 131 VIYDPIIELEYQKNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQRLLSTAVNTSS 190

Query: 185 TS---PASLAQEGEESKPDYDLDDPFLDSQP 212
           +S   P+ + ++ E+   +YDLDDPFLDSQP
Sbjct: 191 SSKPAPSFIQEDEEQVDLEYDLDDPFLDSQP 219

[Close]

BLAST of Spg010944 vs. NCBI nr
Match: ADN34145.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 160.6 bits (405), Expect = 2.3e-35
Identity = 95/148 (64.19%), Postives = 112/148 (75.68%), Query Frame = 0


Query: 5   RGRASSSRGSRPSSSSPA-PPPTSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPP 64
           R  ++SS+G RPSSSS + P P SA QY MDLGFT VTRSRSR   I    P ESST PP
Sbjct: 11  RTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIWIGSPTESST-PP 70

Query: 65  RPSANLVRPSGGVVQLRPPVSPSSITGSSIPSSSTYSQAVVPEKRFVPRPEIKSNFQKSQ 124
           RPS NL+RPSGGV+Q+RPP SPSS   SS P  +TYSQAV  +KRFVPRPEIKS FQKS 
Sbjct: 71  RPSVNLIRPSGGVIQMRPPASPSSNRESSTP-PTTYSQAVTLDKRFVPRPEIKSYFQKSI 130

Query: 125 VIYEPIIEPEFQGLNLDETISNMYPTEF 152
           V+Y+PIIEPE+Q L L+E +S ++P +F
Sbjct: 131 VVYDPIIEPEYQSLTLEEMVSKIFPKDF 156

[Close]

BLAST of Spg010944 vs. NCBI nr
Match: KAA0043136.1 (putative Retrotransposon protein [Cucumis melo var. makuwa] >TYK23922.1 putative Retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 160.2 bits (404), Expect = 3.1e-35
Identity = 95/148 (64.19%), Postives = 112/148 (75.68%), Query Frame = 0


Query: 5   RGRASSSRGSR-PSSSSPAPPPTSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPP 64
           R  ++SS+G+R PSSS+ AP P SADQYAMDLGFT VTR  SR  GI    P ESST PP
Sbjct: 11  RTNSTSSKGNRPPSSSNSAPSPLSADQYAMDLGFTTVTRFISRSFGIWIGSPTESST-PP 70

Query: 65  RPSANLVRPSGGVVQLRPPVSPSSITGSSIPSSSTYSQAVVPEKRFVPRPEIKSNFQKSQ 124
           RPS NL+RPS GVVQ+RPP SPSS   SS P  +TYSQAV P+KRFVPRPEIKS FQK  
Sbjct: 71  RPSTNLIRPSSGVVQMRPPASPSSNRESSTP-PTTYSQAVTPDKRFVPRPEIKSYFQKPI 130

Query: 125 VIYEPIIEPEFQGLNLDETISNMYPTEF 152
           V+Y+PIIE E+Q L  +ET+S ++P +F
Sbjct: 131 VVYDPIIELEYQSLTSEETVSKIFPEDF 156

[Close]

BLAST of Spg010944 vs. NCBI nr
Match: KAA0026217.1 (hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa] >TYK30739.1 hypothetical protein E5676_scaffold343G00750 [Cucumis melo var. makuwa])

HSP 1 Score: 155.6 bits (392), Expect = 7.6e-34
Identity = 94/148 (63.51%), Postives = 112/148 (75.68%), Query Frame = 0


Query: 5   RGRASSSRGSRPSSSS-PAPPPTSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPP 64
           R  ++SS+G+R SSSS  AP P SADQYAMDLGFT VTRSRSR  GI    P ESST PP
Sbjct: 11  RTNSTSSKGNRLSSSSNSAPSPMSADQYAMDLGFTIVTRSRSRLSGIGIGFPTESST-PP 70

Query: 65  RPSANLVRPSGGVVQLRPPVSPSSITGSSIPSSSTYSQAVVPEKRFVPRPEIKSNFQKSQ 124
           RPSANL+RP G VVQ++PP SPSS   SS P  +TYSQAV P+KRFVPRP+IK  FQKS 
Sbjct: 71  RPSANLIRPFGRVVQMKPPASPSSNRKSSTP-PTTYSQAVTPDKRFVPRPKIKFYFQKSI 130

Query: 125 VIYEPIIEPEFQGLNLDETISNMYPTEF 152
           V+Y+P IE E+Q L L+E +S ++P +F
Sbjct: 131 VVYDPTIELEYQSLTLEEAVSKIFPEDF 156

[Close]

BLAST of Spg010944 vs. NCBI nr
Match: KAA0066384.1 (hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa] >TYK00900.1 hypothetical protein E5676_scaffold602G00610 [Cucumis melo var. makuwa])

HSP 1 Score: 154.5 bits (389), Expect = 1.7e-33
Identity = 106/207 (51.21%), Postives = 124/207 (59.90%), Query Frame = 0


Query: 5   RGRASSSRGSRPSSSS-PAPPPTSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPP 64
           R  ++SS+G+  SSSS  AP PT ADQYAM++GFT VTRSRSR   IR +  +  ST PP
Sbjct: 11  RTNSTSSKGNHASSSSNSAPSPTGADQYAMEVGFTTVTRSRSRSSNIR-IGSLTESTTPP 70

Query: 65  RPSANLVRPSGGVVQLRPPVSPSSITGSSIPSSSTYSQAVVPEKRFVPRPEIKSNFQKSQ 124
           RPS NL+ PS GVVQ+RPP SPSS   SS P S+TYSQAV P+KRFVPRPEIKS FQK  
Sbjct: 71  RPSVNLIHPSSGVVQMRPPASPSSNRESSTP-STTYSQAVTPDKRFVPRPEIKSYFQKLI 130

Query: 125 VIYEPIIEPEFQGLNLDETISNMYPTEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS 184
           V+Y+PIIE E+                                         Q+ AS  S
Sbjct: 131 VVYDPIIELEY-----------------------------------------QINASSSS 174

Query: 185 TSPASLAQEGEES-KPDYDLDDPFLDS 210
            SP+S  QE EE   P+YDLDDPFLDS
Sbjct: 191 KSPSSSIQEDEEQVDPEYDLDDPFLDS 174

[Close]

BLAST of Spg010944 vs. ExPASy TrEMBL
Match: A0A5D3BI61 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00950 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.4e-41
Identity = 117/211 (55.45%), Postives = 143/211 (67.77%), Query Frame = 0


Query: 5   RGRASSSRGSRPSSSS-PAPPPTSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPP 64
           R  ++SS+G+ PSSSS  AP P S DQYAMDLG+T V +SRS+  GI    PMESST PP
Sbjct: 11  RTNSTSSKGNCPSSSSNSAPSPMSVDQYAMDLGYTTVIQSRSKSSGIWIRSPMESST-PP 70

Query: 65  RPSANLVRPSGGVVQLRPPVSPSSITGSSIPSSSTYSQAVVPEKRFVPRPEIKSNFQKSQ 124
           RPS NL+ P G V+Q+R   SPSS   SS    +TYSQAV P+K+FVPR EIKS FQK  
Sbjct: 71  RPSVNLIHPFGEVIQMRSSASPSSNRESS-TLPTTYSQAVTPDKQFVPRIEIKSYFQKPI 130

Query: 125 VIYEPIIEPEFQGLNLDETISNMYPTEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS 184
           VIY+PIIE E+Q     + I      +FLNDK K LAAL Q T DADFQR+L  A +  S
Sbjct: 131 VIYDPIIELEYQKNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQRLLSTAVNTSS 190

Query: 185 TS---PASLAQEGEESKPDYDLDDPFLDSQP 212
           +S   P+ + ++ E+   +YDLDDPFLDSQP
Sbjct: 191 SSKPAPSFIQEDEEQVDLEYDLDDPFLDSQP 219

[Close]

BLAST of Spg010944 vs. ExPASy TrEMBL
Match: E5GCE6 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-35
Identity = 95/148 (64.19%), Postives = 112/148 (75.68%), Query Frame = 0


Query: 5   RGRASSSRGSRPSSSSPA-PPPTSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPP 64
           R  ++SS+G RPSSSS + P P SA QY MDLGFT VTRSRSR   I    P ESST PP
Sbjct: 11  RTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIWIGSPTESST-PP 70

Query: 65  RPSANLVRPSGGVVQLRPPVSPSSITGSSIPSSSTYSQAVVPEKRFVPRPEIKSNFQKSQ 124
           RPS NL+RPSGGV+Q+RPP SPSS   SS P  +TYSQAV  +KRFVPRPEIKS FQKS 
Sbjct: 71  RPSVNLIRPSGGVIQMRPPASPSSNRESSTP-PTTYSQAVTLDKRFVPRPEIKSYFQKSI 130

Query: 125 VIYEPIIEPEFQGLNLDETISNMYPTEF 152
           V+Y+PIIEPE+Q L L+E +S ++P +F
Sbjct: 131 VVYDPIIEPEYQSLTLEEMVSKIFPKDF 156

[Close]

BLAST of Spg010944 vs. ExPASy TrEMBL
Match: A0A5A7TM80 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold592G00220 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.5e-35
Identity = 95/148 (64.19%), Postives = 112/148 (75.68%), Query Frame = 0


Query: 5   RGRASSSRGSR-PSSSSPAPPPTSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPP 64
           R  ++SS+G+R PSSS+ AP P SADQYAMDLGFT VTR  SR  GI    P ESST PP
Sbjct: 11  RTNSTSSKGNRPPSSSNSAPSPLSADQYAMDLGFTTVTRFISRSFGIWIGSPTESST-PP 70

Query: 65  RPSANLVRPSGGVVQLRPPVSPSSITGSSIPSSSTYSQAVVPEKRFVPRPEIKSNFQKSQ 124
           RPS NL+RPS GVVQ+RPP SPSS   SS P  +TYSQAV P+KRFVPRPEIKS FQK  
Sbjct: 71  RPSTNLIRPSSGVVQMRPPASPSSNRESSTP-PTTYSQAVTPDKRFVPRPEIKSYFQKPI 130

Query: 125 VIYEPIIEPEFQGLNLDETISNMYPTEF 152
           V+Y+PIIE E+Q L  +ET+S ++P +F
Sbjct: 131 VVYDPIIELEYQSLTSEETVSKIFPEDF 156

[Close]

BLAST of Spg010944 vs. ExPASy TrEMBL
Match: A0A5D3E4J4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00750 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.7e-34
Identity = 94/148 (63.51%), Postives = 112/148 (75.68%), Query Frame = 0


Query: 5   RGRASSSRGSRPSSSS-PAPPPTSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPP 64
           R  ++SS+G+R SSSS  AP P SADQYAMDLGFT VTRSRSR  GI    P ESST PP
Sbjct: 11  RTNSTSSKGNRLSSSSNSAPSPMSADQYAMDLGFTIVTRSRSRLSGIGIGFPTESST-PP 70

Query: 65  RPSANLVRPSGGVVQLRPPVSPSSITGSSIPSSSTYSQAVVPEKRFVPRPEIKSNFQKSQ 124
           RPSANL+RP G VVQ++PP SPSS   SS P  +TYSQAV P+KRFVPRP+IK  FQKS 
Sbjct: 71  RPSANLIRPFGRVVQMKPPASPSSNRKSSTP-PTTYSQAVTPDKRFVPRPKIKFYFQKSI 130

Query: 125 VIYEPIIEPEFQGLNLDETISNMYPTEF 152
           V+Y+P IE E+Q L L+E +S ++P +F
Sbjct: 131 VVYDPTIELEYQSLTLEEAVSKIFPEDF 156

[Close]

BLAST of Spg010944 vs. ExPASy TrEMBL
Match: A0A5D3BPD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00610 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 8.2e-34
Identity = 106/207 (51.21%), Postives = 124/207 (59.90%), Query Frame = 0


Query: 5   RGRASSSRGSRPSSSS-PAPPPTSADQYAMDLGFTPVTRSRSRQGGIRPMPPMESSTPPP 64
           R  ++SS+G+  SSSS  AP PT ADQYAM++GFT VTRSRSR   IR +  +  ST PP
Sbjct: 11  RTNSTSSKGNHASSSSNSAPSPTGADQYAMEVGFTTVTRSRSRSSNIR-IGSLTESTTPP 70

Query: 65  RPSANLVRPSGGVVQLRPPVSPSSITGSSIPSSSTYSQAVVPEKRFVPRPEIKSNFQKSQ 124
           RPS NL+ PS GVVQ+RPP SPSS   SS P S+TYSQAV P+KRFVPRPEIKS FQK  
Sbjct: 71  RPSVNLIHPSSGVVQMRPPASPSSNRESSTP-STTYSQAVTPDKRFVPRPEIKSYFQKLI 130

Query: 125 VIYEPIIEPEFQGLNLDETISNMYPTEFLNDKSKLLAALAQTTSDADFQRILQMAASDRS 184
           V+Y+PIIE E+                                         Q+ AS  S
Sbjct: 131 VVYDPIIELEY-----------------------------------------QINASSSS 174

Query: 185 TSPASLAQEGEES-KPDYDLDDPFLDS 210
            SP+S  QE EE   P+YDLDDPFLDS
Sbjct: 191 KSPSSSIQEDEEQVDPEYDLDDPFLDS 174

The following BLAST results are available for this feature:

BLAST of Spg010944 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98361.1	2.9e-41	55.45	hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]	[more]
ADN34145.1	2.3e-35	64.19	hypothetical protein [Cucumis melo subsp. melo]	[more]
KAA0043136.1	3.1e-35	64.19	putative Retrotransposon protein [Cucumis melo var. makuwa] >TYK23922.1 putative...	[more]
KAA0026217.1	7.6e-34	63.51	hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa] >TYK3073...	[more]
KAA0066384.1	1.7e-33	51.21	hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa] >TYK0090...	[more]

BLAST of Spg010944 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg010944 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BI61	1.4e-41	55.45	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
E5GCE6	1.1e-35	64.19	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5A7TM80	1.5e-35	64.19	Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A5D3E4J4	3.7e-34	63.51	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BPD3	8.2e-34	51.21	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Spg010944 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg010944.1	Spg010944.1	mRNA