Spg010927 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg010927
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold10: 7520791 .. 7522560 (-)
RNA-Seq Expression	Spg010927
Synteny	Spg010927

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTCTCACCGGCGGTCGTGAACCAAGCGTCCAACGCTCCAACTCCATCTTCTTCGGCAATGTCGACTAGTTCGAGGGAGATGCCGAGTTCATCTACGCCAAGGAGGTTCACGCGCGCCACTACTGTCCGCCAAACCCAAAAACCCACTGCTCAACAGTTCAAGAAACGTTCACGGGAGTGGTTTTCAATGATCCGAGAGATGGGTGCTCAGAGACGTGCTGCCCTTGAAGAGGAAGGGAATCGGCAAGATGAAAAAGAAGTCGCCAAGGCAGCTGGAAGCTCTCGGCAAGGAGAAGCTTCAATGGGTAAGGTTTCCAAACCTTCAACTAACCCTTCTCTATCTTGCAGGACCAAACCTGTTGTTACTTACAACGCAAGAAAGAGGAGCCCGAAGAAAAATGTGCTTGAAAAACCGCTTGAGGTCAAGCCCCTCAAAACCGCAAGGATGCCTCCAGATGTATTCGAGGGAATAATTCGCCAAGCAGTGGCAAAGGCTCTTGCGATTGCTGAAGGGTATAAGGCTGAACAGGATGCTTTGAAAGAGATTGAGGATGTGAGAGAGATGGAAAATCAGAAAATGGTTGAGGAAGACGAGCTTGCAAAGGAAAGAGACCGTGAAGAAGAAAAAAGAACAAGAGAAGAAGAACAAGAGGTCGAGAGGGCCTTAGAAGCTGAAGAAGAAAGAAAATATGAGAAAAACCTCAGGAGGGCAGCCATGGATTTGCAACTCCTTGAGGAAGAGAAAAAGAGACGGGAAGAAATAAAAGAAGATGAAAAAAGAAGGAAGGAAGCGGAAGACTTCCTTTCAGCCTTGGAGCCACTCCACAAGGCTCAAAGTGAGGCTGAAGTGTTGCAAGGAAGGGTAGAAGAAGAGGCCCAACAGGGGCCAACTGAAGAAAATGTGGAAAAAGAAAAAGAAAGAAAAGTGGAGAATGAAGGCCAGAATGCGACTGCATCTGGGCCGGATTCTGTAGAAGGCCTAGCCGAGGCCACCATTGATCAGCCAGCTGAAGAGGTTTTTGAACCTCTATTCATGAATGACCCACCAGCTGCTGATAGCACCTCTTCGAGAGAGAAGAGGGACGAAGAGGAAAAAGAAGATGAGGAGGTCGAGACCTCCACTGACTCTGATACAGAATTTGATTTAGAGATAAGGGAACTAGATGATGACCAAGTTCCTATCTCTGCAGCATTGAGAAGAAAGAGGAAGAGAGAGATAAAGGCCGAGAGGAGGACAAAGAACAAGAATGACCCCATATTTGCCAAGAGGCCGAGGACAAGGTCCATGGACGCCTATCCTGCAGTTCCTCCTACCACCTCACCCGCCAAGCCAAAGGGCAAGTAACCCAAGGCTACATCTCCTAGAAATCCATTCCCTGAGGTATTTAGAGATGTTAATTTTCAGGAACGGATGGAGATCATGAAGAAGAGAGATTTCCTCAATGAAAAGGGATTCTCTAACAGAGCTGGAGCACTGCCAGAGTTCGTGAGCAGGATCATATCTCAATACAAGTGGCAGGACTTCTGTGCTCACCCATAGGAGGTTGTAGTGCCTTTAGTTCGAGAGTTTTACGCCGGCCTGAGGGAGGAAAGCATTAGCATGGCGGTTGTGAGGGGGAAGATGGTCAGTTTCTCCTCAATCGACATTAACAGGGTGTACAGGATCAAGGCACCCTTGAACCCAAGAGGGAATGACGTTATAAGGAACCCTTCGGCCAAGCAGATGAAAGAAGCTCTTAAACTTGTGACCAATAAGGGGGTTTAG

mRNA sequence

ATGGGATTCTCACCGGCGGTCGTGAACCAAGCGTCCAACGCTCCAACTCCATCTTCTTCGGCAATGTCGACTAGTTCGAGGGAGATGCCGAGTTCATCTACGCCAAGGAGGTTCACGCGCGCCACTACTGTCCGCCAAACCCAAAAACCCACTGCTCAACAGTTCAAGAAACGTTCACGGGAGTGGTTTTCAATGATCCGAGAGATGGGTGCTCAGAGACGTGCTGCCCTTGAAGAGGAAGGGAATCGGCAAGATGAAAAAGAAGTCGCCAAGGCAGCTGGAAGCTCTCGGCAAGGAGAAGCTTCAATGGGTAAGGTTTCCAAACCTTCAACTAACCCTTCTCTATCTTGCAGGACCAAACCTGTTGTTACTTACAACGCAAGAAAGAGGAGCCCGAAGAAAAATGTGCTTGAAAAACCGCTTGAGGTCAAGCCCCTCAAAACCGCAAGGATGCCTCCAGATGTATTCGAGGGAATAATTCGCCAAGCAGTGGCAAAGGCTCTTGCGATTGCTGAAGGGTATAAGGCTGAACAGGATGCTTTGAAAGAGATTGAGGATGTGAGAGAGATGGAAAATCAGAAAATGGTTGAGGAAGACGAGCTTGCAAAGGAAAGAGACCGTGAAGAAGAAAAAAGAACAAGAGAAGAAGAACAAGAGGTCGAGAGGGCCTTAGAAGCTGAAGAAGAAAGAAAATATGAGAAAAACCTCAGGAGGGCAGCCATGGATTTGCAACTCCTTGAGGAAGAGAAAAAGAGACGGGAAGAAATAAAAGAAGATGAAAAAAGAAGGAAGGAAGCGGAAGACTTCCTTTCAGCCTTGGAGCCACTCCACAAGGCTCAAAGTGAGGCTGAAGTGTTGCAAGGAAGGGTAGAAGAAGAGGCCCAACAGGGGCCAACTGAAGAAAATGTGGAAAAAGAAAAAGAAAGAAAAGTGGAGAATGAAGGCCAGAATGCGACTGCATCTGGGCCGGATTCTGTAGAAGGCCTAGCCGAGGCCACCATTGATCAGCCAGCTGAAGAGGTTTTTGAACCTCTATTCATGAATGACCCACCAGCTGCTGATAGCACCTCTTCGAGAGAGAAGAGGGACGAAGAGGAAAAAGAAGATGAGGAGGTCGAGACCTCCACTGACTCTGATACAGAATTTGATTTAGAGATAAGGGAACTAGATGATGACCAAGTTCCTATCTCTGCAGCATTGAGAAGAAAGAGGAAGAGAGAGATAAAGGCCGAGAGGAGGACAAAGAACAAGAATGACCCCATATTTGCCAAGAGGCCGAGGACAAGGTCCATGGACGCCTATCCTGCAGTTCCTCCTACCACCTCACCCGCCAAGCCAAAGGGCAAGGTGTACAGGATCAAGGCACCCTTGAACCCAAGAGGGAATGACGTTATAAGGAACCCTTCGGCCAAGCAGATGAAAGAAGCTCTTAAACTTGTGACCAATAAGGGGGTTTAG

Coding sequence (CDS)

ATGGGATTCTCACCGGCGGTCGTGAACCAAGCGTCCAACGCTCCAACTCCATCTTCTTCGGCAATGTCGACTAGTTCGAGGGAGATGCCGAGTTCATCTACGCCAAGGAGGTTCACGCGCGCCACTACTGTCCGCCAAACCCAAAAACCCACTGCTCAACAGTTCAAGAAACGTTCACGGGAGTGGTTTTCAATGATCCGAGAGATGGGTGCTCAGAGACGTGCTGCCCTTGAAGAGGAAGGGAATCGGCAAGATGAAAAAGAAGTCGCCAAGGCAGCTGGAAGCTCTCGGCAAGGAGAAGCTTCAATGGGTAAGGTTTCCAAACCTTCAACTAACCCTTCTCTATCTTGCAGGACCAAACCTGTTGTTACTTACAACGCAAGAAAGAGGAGCCCGAAGAAAAATGTGCTTGAAAAACCGCTTGAGGTCAAGCCCCTCAAAACCGCAAGGATGCCTCCAGATGTATTCGAGGGAATAATTCGCCAAGCAGTGGCAAAGGCTCTTGCGATTGCTGAAGGGTATAAGGCTGAACAGGATGCTTTGAAAGAGATTGAGGATGTGAGAGAGATGGAAAATCAGAAAATGGTTGAGGAAGACGAGCTTGCAAAGGAAAGAGACCGTGAAGAAGAAAAAAGAACAAGAGAAGAAGAACAAGAGGTCGAGAGGGCCTTAGAAGCTGAAGAAGAAAGAAAATATGAGAAAAACCTCAGGAGGGCAGCCATGGATTTGCAACTCCTTGAGGAAGAGAAAAAGAGACGGGAAGAAATAAAAGAAGATGAAAAAAGAAGGAAGGAAGCGGAAGACTTCCTTTCAGCCTTGGAGCCACTCCACAAGGCTCAAAGTGAGGCTGAAGTGTTGCAAGGAAGGGTAGAAGAAGAGGCCCAACAGGGGCCAACTGAAGAAAATGTGGAAAAAGAAAAAGAAAGAAAAGTGGAGAATGAAGGCCAGAATGCGACTGCATCTGGGCCGGATTCTGTAGAAGGCCTAGCCGAGGCCACCATTGATCAGCCAGCTGAAGAGGTTTTTGAACCTCTATTCATGAATGACCCACCAGCTGCTGATAGCACCTCTTCGAGAGAGAAGAGGGACGAAGAGGAAAAAGAAGATGAGGAGGTCGAGACCTCCACTGACTCTGATACAGAATTTGATTTAGAGATAAGGGAACTAGATGATGACCAAGTTCCTATCTCTGCAGCATTGAGAAGAAAGAGGAAGAGAGAGATAAAGGCCGAGAGGAGGACAAAGAACAAGAATGACCCCATATTTGCCAAGAGGCCGAGGACAAGGTCCATGGACGCCTATCCTGCAGTTCCTCCTACCACCTCACCCGCCAAGCCAAAGGGCAAGGTGTACAGGATCAAGGCACCCTTGAACCCAAGAGGGAATGACGTTATAAGGAACCCTTCGGCCAAGCAGATGAAAGAAGCTCTTAAACTTGTGACCAATAAGGGGGTTTAG

Protein sequence

MGFSPAVVNQASNAPTPSSSAMSTSSREMPSSSTPRRFTRATTVRQTQKPTAQQFKKRSREWFSMIREMGAQRRAALEEEGNRQDEKEVAKAAGSSRQGEASMGKVSKPSTNPSLSCRTKPVVTYNARKRSPKKNVLEKPLEVKPLKTARMPPDVFEGIIRQAVAKALAIAEGYKAEQDALKEIEDVREMENQKMVEEDELAKERDREEEKRTREEEQEVERALEAEEERKYEKNLRRAAMDLQLLEEEKKRREEIKEDEKRRKEAEDFLSALEPLHKAQSEAEVLQGRVEEEAQQGPTEENVEKEKERKVENEGQNATASGPDSVEGLAEATIDQPAEEVFEPLFMNDPPAADSTSSREKRDEEEKEDEEVETSTDSDTEFDLEIRELDDDQVPISAALRRKRKREIKAERRTKNKNDPIFAKRPRTRSMDAYPAVPPTTSPAKPKGKVYRIKAPLNPRGNDVIRNPSAKQMKEALKLVTNKGV

Homology

The following BLAST results are available for this feature:

BLAST of Spg010927 vs.


Match Name	E-value	Identity	Description

BLAST of Spg010927 vs.


Match Name	E-value	Identity	Description

BLAST of Spg010927 vs.


Match Name	E-value	Identity	Description

BLAST of Spg010927 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 276..296
None	No IPR available	COILS	Coil	Coil	coord: 174..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..314
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 412..426
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..451
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 366..388
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg010927.1	Spg010927.1	mRNA