Spg010913 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg010913
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Retrotransposon protein
Location	scaffold10: 6875502 .. 6886060 (+)
RNA-Seq Expression	Spg010913
Synteny	Spg010913

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGTATTTGCTAACGACGGAGGAAAGGCGGATTCTGGCGGGCATTGGAGTGGGGAGGGGGATTGTGAAGCATGTAGTGGACGTGATTCCATCTTGCCGCTCCATAAACTCGACCCTCTCTCTTGCTGCCTCCAAATTTCCATCAATTTTCTTGTATCGTGGCTTCCTCCCATTAAAAAAAGTGTTCTCTGTTCTGATTGTGAGGTAGCGTCTGAGGCCTGGTATGAGGGAGGCGGTCGGATGAGTGGAGCTTGGTGGGGGGCTTTCATTGTCCACTGAACAGGTTCATTTCTTTAACCTTTGGCCGATGACGATGAATCTGTTTAATGTGTTGAGGTTTTTTTATGCCAATGATATTCTTTAATATTTCTTGTATTGTTGGTTCTAAATCTGGCTTATTTGATTTTGATGTTGTTTTGAAAAAAAAAATGTACAATGTTGGCTCTGTTTTGTACCCTCTAATTGAGAATATTGTGGCTTAATGTTTGTTTTCTGGATTGAGTTCGAATGAGGAAGATACAATGACAATCTATATAATGTTAGTTCTGTTCTTTATTGTGCAAACAAATTTTTTCTGAGTCTAAGATCTGAGGCCTCCAACTATGCAATTTTATTCAATTTTTTTTTTCTATTTTGGATGTTGTAGCTTGATATGTTCACTGTTTGGTTGGTATTATTTGTTTCAATTCAAGAAAATGAAAAAAAAAATTGGTTCTGTTCTTTTCCTTGTCAAACAAATATTTTGTTACGAGTCTAATATCTAAGGCCTCCTAGTATGCAATTATATTGAATTTGTTGTTTTTTTTTTTTTTAAAAAAAAAATGGATGTTGCATTTAGATATGTTCTGGTAAAAGAATTCAAGTCATTGTTCATTATATTTAGTTGAAATGACCAGGTGGTTGAGTTTATTGTTTCTACTGTTCTTACCTTTCCTTTAAGTAATGGAAGACAATGATGAGGAATATTTAGTTGAAATGACTAGATAGTTGAGTTCTTACTTTACCTTCTTTTAATTAATGAAGTGGAATGGTGTAGAGTATTTAGTTGAAATGACTAGTTAGTTGAGTTATTGTTGTGTCATCCTTTTATTTTAAACATCTCTTAATGGTACTAATGGTAGTTGGTGAATTAATACCTACTTTTTTCATCTTTGCTTATAAAATTACCACTCTTCATATCTAAATATGTTCCTTCCCTCTCACACCAAAGGAGTCCTCTCTTTGGTTAGTCTTTCTCTCCCTTACATGAGTTCATTGTGTTGTATTAATGTAGTTGTATTCTTCAGATGAGGTTTACCTTCTAACTAATGCCTTTGCTTTGTGTTTCTTTTCTTCTGTTTATCTCCAATGTCTTTATGGTACGTGGCCTACTCTTGAATGTGCATTTCATATGTCCATGATCACGAATCCTAGAGGTATCTTTCCCTTGACTGTTTTATATACATATGTTTTACTTCTTTTTTCTTATTCAATTATCTTTACTTCTACATTGGTTCCTAATTTATTTACTTTATTTTGTAGGTCTTCTTTCCTCATACTCTAGGCCAGGCCGGTCAGTGCAACTTGAAGCCCGTCACCTTCGTAACGTAATTTTTATTTCCATCCACTGTGTGTTTATGTTTTTTAAGTAGAACACTGTTATTTACGAAATTTGCTAAGAACTTCAACTTTTCTATGTTATGGAATTTGTTAGGGGTCATTTTTTAGAATGTTTGTTTTGGTGGATTTTTCTTTTCTTTTACCAATTTTTATGATATTTACATTTGAGTTATCTTTGTATGTTACAATAGTTACAAATTTTTGTTTTGTATGGATGTAAATTTGTGTTATGTTTTTTTTTTTTTTTTGGTATAATAGTCACAATTGTGATTAGGTTACGTTGATGATAAAGAAGTAGATGGAAACATGCTTTTAGCCTATTCAAATGAACTTAGGCAATATATTTTTAGATTAAGTTTTAAAAGGAATATAAAGTATGTTAAATATAAACTGTGGGTAGGTTACATTGAAAATTTAGGACTAGTTTTGAAAAAAACTATTGTTACTTCAACCCAAAAAAATTAGGACTACTGTTTTAAAAAAAAAAAACTTACTACTACTTTTTTTTTTTTTAAAAAAAAATGTATTGTTTTAAAGAAAATTAAAGTATGACTAAATTTTTTACTAAAAAAAAAAAGTTGGAAATAAGTGATCTGTGGAAGTTGGAAATATGCATTATAAAAAAACACTATGACTAAATTCCAAAACTTGGGTAGTTAGCATTGAAAAATGATTTTTTTTTTTAAAAAAAAGCTTAATGCTACTGTTTTTTTTTTTTTTTTTAAAAAAAAAATTATAGTTTTAAAGCAAAATAAAGTATGACTAAAATTTTTACTAAAAAAATTGGGTAGTTAGCATAGAAAAATGATTTTTTTTTTTTTTTAAAAAAAAGCTTAATGCTACTTTTTTTAAAAAAAAAAAAATTATTGTTTTAAAGCAAATTAAACTATGACTAAATTTTTTACTCAAAAAAAAAAAAAAAGTTGGAAATATGTCTTTAAAAAAGAGGAGATCTATGGAAGTTGGAAAATATATGCCGTATGAAAAAAAACTATGACAAAATTCCAAAACTTGGGTAGTTAGCATTGAATATGATTTTTTTTTAAAAAAAAAAATTCATGCTACTGTTTTTTTTTTTTAAAAAAAAAAACTATTGTTTTAAAGCAAATTAAACTATGACTAAATTTTTTACTAAAAAAAAGTTGGAAATATGTCTTTAAGGAAGAGGAGTGATCTATGGAACTTGGAAATATGCCTTATAAAAAAAAACTATGACTAAATTCCAAAACTTGGATAATTAGCATTGAAAAATGATTTTTTTTTTTTGAAAAAAACTTAATGCTACTGTTTTTTTTTTAAAAAGAAAATCTATTGTTTTAAAACAAATTAAACCATGACTAAATTTTTTACTCAAAAAAAAAAAAGTTGGAACTATGTCTTACAGTAGTTATATGCTCATCATAGAAACCAACATTGGTTTTTTTTTTCTCAGCAATGGATGACCTTGACATAGAACAGGACGAGTTAATAGCAATACTCGCTATCATATGCACCACACAATACCAATGGATTTTAATTTTCAATTTTATTACGAGTCTTGGAGATCTCACCATAGAAAATCAATCACCCTACGTTAGACACCAAATTAGGCAGCTGAACTTCTTTCGCCTAATTCATGAGAGTGACTTAGCTTGTCGGGAGAGCACTCGAATGGATAGGAGATGTTTCACCATATTATGCACCTTGCTAAGAACAACAGGAGGTTTGTCAGGCACGAATTATGTGGACATCGAAGAGATGGTGGGGATTTTCCTTCATATTCTAGCGCATGACGTCAAGAACAGAGTAGTTCGATGACACTTTGCTCGATCCGGTGAGACGGTGTCACGACACGTAAACTCTGTTCTTAACGCTGTTCTAAGATGCCACGAGATCCTCTTGAAGAAACCAGAGCCAATCACAAATAATTGCACCGATGAGCGATGGCGATGGTTCGAGGTAAATAAATCGTGTCATACAGTAATTAAGTTCCGCATTATGAATGCATGAAAGGACGATTAAATATTCTTGTCCCTAACAGAATTGTTTGGGTGCGCTCGATGGTACACACATTAGGGTTAACGTAAGCGCAGCCGATCGCCCTAGGTACAGGACTAGAAAGGGTGAGGTTGCTACTAATGTACTAGGTGTGCTCCCAAAATGGTGAGTTCATCTTCGTACTACCCGGGTGGGAAGGATCTGCGGCAGACGCTCGAGTACTAAGAGATACAATATCACGACCTACCGGTCTAGGGTCCCTAGGGGTAAAGTGACACTCTCATTTGTTATATTGTACCAGACATGTGTATGTGGATTATACACTAAAGTTTGATAATCCACGTCGATGTCAATGTGGACAGGATACTACTACCTGTGCGATGCAGGTTACCCAAATGCAGAAGGTTTTCTTGCCCCATATCGAGGTCAACGCTACCATCTCACCGAGTGGCGTGGAGAAAATCCACCAACAACTCCAAAAGAGCTATTCAATATGAGACATTCTTCTGCTAGAAATGTTATTGAGAGAGCCTTTGGAGCGTTGAAGGGTCGGTGGGCAATTCTACGAGGAAGGTCATTTTATCCTGTGCGAGTGCAATGTAGGATGATAACGGCATGTTGCCTCCTACATAATCTGATAATTCGAGAAATGGGACCCAACCCATCCTACGAGGGACATGCTGGAGAAGTTGATTCAAAAGGTATGAGCGCCGAGTACATAAACTTTGTGGAACCCACTGGAGCATGGACTGAATGGAGAGACAATCTTGCAAATCAAATGTTCGAAGATTGGAACGAGGAATAAAATCTCTTTGTTATTTAGTTCTTAATGTTGTGTAGATTTTTTTGTTTACTGACCCACTGCATCTTTGTACTCCAACCATTTTTTTTGTTTGTAAATAAAGTTGCTTGGTTACTTGTTTACTACTATTAAATTTAATTAACTTATGTGGTGCATGTCAACTAGTAATAAATAGTATATACTAACTTCAGTACAATAACCCTCATGTTCATGCAGATGGTACCGTCTACTTCGAAAGCCCCTAAACATATCTGGACACCAATGGAAGATGAAGTTTTGGTCCAGTGTCAGTTACATTTGGTTCAAGCAGGTGGATGGCGGGCTGACAATGGGACCTTTAGACCGGGGTACTTGTAACAAGTACAGAAGTTGATGAAAGAGAAACTGCCAGGATGCGACATACAAGTAATGACGAACTTGGAGTCTAGAGTGAGGATCCTAAAAAGGCAATATGGTGCCCTCGTCGAAATGATGGGTCCCACTTGCAGTGGGTTTGGCTGGAATGATGAGCGAAAGTGCATTGAAGCAGAGAAATCGGTCTTCGATGATTGGGTTAGGGTAACAATTCAAACTTAATCCATGTACAGTTCATGAATAAAATGTTATACGATCATGTATGTTAATTGTGTTAGCATGTTGAATACAGGGACACCCAGCTGCTCGTGGTCTGAGGAACAAGCCATTCCCCTACTTCGATGACCTAGCAATTGTTTTCGGGAAGGATAAGGCCAATGGAAAAGGTGCTTCGACTCCGAACGAAATGGCCACTGACTTGGATGATGACGTGAACACAGATGTTGAAGATTGTTATGTCCCTTCCCCTCCTATAGTTGAATCTGTGGTAGGTGAAGAATTTTATACCACCCGTTCGAGCAGGATTGACACGCCAGGATCATCACAGGGAAGTAAGAGGAGGTGCACAGTACCAGCAGACGCTGTCGACACATTTTGCACGGAGATGCGTTATGTGTCCACACAAATCGAGAAGATCGCGCTCTGGCCTCAACATAAGGATGAAATAGAGTCAGCTCGACGTAAACAATTGTATGGGGAACTACAGTCTATCCCGGGAATGGACATGGATGACTGTTTGCTTGTGGCCGAGACTCTGTTGGCTGATGACAAGAAATTTCGCTCATTCCTCGACTACCCCACTGAATGGAAGTATAAGTGCTGCATGCGTATCTTGGGAAGGCAGCCATGACCATACTACCTATGAATTCTAGTTCATAGCTTTTGTTGGACCCTCATATTTACTATTTCATTGACTTATGTCACCTGTAATGCTCATCTATCTTCCTTTGAATTGTCGTCTGTATTTCGGTATTACAAACTTTTGTACCTTTTGTCGGGTCTAACTCTTTTTTTGTGAATGATATAGATTGTTCTAACTTATGAACACAATTTTCTTAGTCTACAAGTAGAAGATGAATTAAATTATTCATTGATATTCCCCCTGAAAAATTTATCTAAATTAAGTAAGGACTTCTACCATTCAATCCTACAAAAATCAAGACAAAAAGAAGATAATAAATTAGCTAAAAGAAAATGTGGGCAAAAAACTGCACAAACCCAGGGTTTAGAACACAACACAGCACCCCAAACACTGTTTTCTGATTCTCAGGGTTCAGAACACAGCACCCCAAACACTGTTTTCTGATTCCCAGGGTTCAGAACACAACACCCCAAACCCTGTTTTCTGATTCCCAGGCTTTCAAACCCACCAGAACAAACCCCCCAGGGTTCTGATTCCGAAACCATGGGCCAAACAGCCCCTTAGTGTTTCCTGAGATTGATTCAAGGTTCATGACCCAACAAGGTATGCATGTGTCCTTCATCTTGTGGATTTACAGAGATGGAATATTTTCAGATCACTAGGAGAACGGTAGATAGTGATGTGGGAGGGGCAATTTAAAATATATATGTTGTGAGTCGATAGTTTAAATGAAAGTTCCTCCACATATTATGGTACAAATTCGAGCCTAGGACCCACAGGTTTATTTTTATTATTATTTTTTTTTGTGAGAGTATCAGGTGGGATTTGAGGGTTGTTATTATTTTATCCCAGTACCCCAAACAACTCAGATTTATCATGTTTTCTTTCAATTTATCATTCTGAAATTAACTTACATTTGGTTTATTAATCAACATTTGATTTTACATTGTCATTATTGTATTTGCATTATAGTAACTAAATATTAGCTCATAGCTAATGTGAACATTGACTTTCTACTGTATTTGCATTATATTATGAACATTGTCTATCATGTATATGATAAGGGTAAAAAATATACCTATTTTACCCTTATATTTAGCTCATTATCTTGTCAAAACTGTATTTTTTAGATCAATATTACTGTTCCCGAGCTCAAAATATGTTAAAGTTGATAAGATAGGAAGTTGAGAGTCACTTTTGTCAAATTATGCTCATTTGTGCTTAAAAAGACTAAATTTGATGGGAATTTGACTGAGTTTGTTGTTGTGCAGAAAAAGCAAGGGAAGCTAGAATTTCCCCAGAACGAAATGTGACTGCATTTCCGGAAAAACAGAGGCAGTTCCGAGTCTACCGCAGGTCGTTTTGAACGAGACTTCTTCGAACCTAACCGGCTGTTTTGACCCCGAAACCGACTGGGCTACCTACCAGCACCTATTTCACAGCTCCTCAACAACTTCCAACACTATATAAGCTCGAGATTCGAAGTGAAATTCTAGCAGAACTCATTTGGAAGAAGATGGTGGTGAGAGAATCCTAGTTGACGCCTATGAGTAGGGATGTACGAGGTTCTTCTTAGATGACTAAATTCTAACCTTAGTTAGACATCAAACCTTAGGGTTTGTAGGGACTTCCACCTATTCCCACTTTGTAAAAGCGAGAGGGTGGAGTGTCGAGCGAACTCTAGAAGGATTGGATAAAATAGAAAAAACCCTAGTATTTAGCTACTGTCATTATTTCCAGCTTTTGTTACTTTTCATTTATCTGTATTCTTTACATCTTATTTTCAATGAAAAGGTATTCACTTTCACTTTATCTCACCATGAGTAGCTAAATTCCGTTGAGGGGTTCAATATGGTGAATTCCCTTATGGTTCAATAGCTTGAAAGCGTTTTATTTGCTTAAGTATTGTTCAATGCATGTCATTCTTTATTGAATATCATTCTGATCTTGCTGAGTTTAAATTTATCACTTAGACTTTGCATGCCATGTGAGTTTGATCTCGAAAGGGACAGACGATATCAGTTCTCATAAAGGTGATATAGGAGAAAAAACTCGAAAGAGATTGTTTGGGTGTATAGGGCAAGCTGCCTAAGACACCCTATATCAACTATAGGATTATAGATTGCATTCGTGAATCATCTATGTCGGAGTCGAGCACAGAAATTTGCATAACGGTACTCGCTTAGCCTTCTAACGGTTCTTGGGAGCAAGGCCAAATAGAAGTTAAATCTGACCCAATGCATTGAATAGGCTTAAGTTGAATAATCCATGATTAAAGTTATTGCCTTTGGGGATGAATCCATATTGAATACTGTTGGGGTTTATGTCCTAGAACTCAAGTTTTGTTATCCTTTATATAAATAAAGATGTTATTCACTGAAATTGTTTATTTATAACTTATAATCCAATAGAAACATCCATGGTTATAACATGAGATACTCAAACTATATAATGAATATGGACAGGGATCAAGTCCGAGTATATAACCTAAATGGTCTATAGTAAATGAATAAGGTTGGGTACCTTGTTCTGGTAACACTATGGATGCGGCCTACTTTGCAAATAAAGCAAACGACGTGATCCTGGATCGTTCATGTAAAGACATTCGAGTAGGGGCATCTAGTGTAAAAGATGTTTACACAAGACTGGACCAAGAAATAAGTCACTCTTACTTGATAACGTCGTTTACTATTAAGACTGATTATTTCATGCGATGACTTAGGTAACTCGATCTTAATCCTGAGCTTACTATGAACTCCTGTTTGTTTAGGGTATCCTTTGATCTGCATAGGTGAGAGTGGTCATAAAATTCGGTTCAACAAACCTCCCATTTTGGGGATACCACTAGATGGATGGTTGGGGACATAGTAATGTAATATGGAATTCACCCCTACCCTATTCAGGGATAGTAGAGAGGTTGTTCCCTTAACTGCTGAATCCAAAACTTGAACAAGGGGCCCCACCCTCTCATTGGCCCGAGAGGGATCTTGTTTAATGGTTGGACCATGAACAAAATTGTTCATTAGAGGACTAGTGGACTTAAGGAACTAAGATGTGCTATAGGGGTAAAACGGATTGTTGACCTATCTATAGTAACGAACGACCTGTGAAGGATTGACTTACTAATCATGGTTACATCGAGTGGACACAAATGTATCTACAGTGAGGGGAGTTCAACTACTAGGCTATAGTGGAGTGTCCCGGTAGTTAACGGATGTTGGTTGACTAGGTTAAAAGAGTTTGGCTAGTTTAACCTCGTAACGTTGGAGCCCATGATCTGTAGGTCCATTAGGTCCCCTTGTTAGCTCGAGACTAACCTTTAGAACAATATGATGGATAAAATATGAATTACTTTAAGTTCATGTTGAGAAATATGAGTAGAGGTGATAGGCGTTGACGATACGTCGGGTTTTTGTAAAAACCATTAGGTGAGTATTTAATATTTAAATATGATTTAAATACCGATAACATGAATAGGGATTCATGATTGAAAATAACATTTAGGAAATGTTCGGGATTGGTGGAAAAAATACTAATTTAATATTTAATATTAAATTAATAATTATTTAATAATTTAATAATTATTTTAAATTAATTTTGAATTAATTTTAAATTGAAAAATTATAATTCAATTTTAATTTTTCAGATTATTAAAGTTCAAATAATTATCCAACTAATTAAGGGTACTTATGGATTTAATTAAATTAAAAAAGGATTGAATTTTTGGAGGTGGAGTGCATGGTGACTAAACTCATGCACTCACCTCATGTTGGACACCAAAATTCACACTAATCTTTGGTTGATTGAGTGTCAATTGCTGGAGCATTCCTTCATCTCTAATCCCTCTATAAAAGGCAAGGAGATGGCTGAAGAAATTAAGCTTGACAGATAAGGAAATGCTACCAAATTGAAAACTCACCAAAACCCACCTTGCAAGCTTGTTCTTCAAACTTTCTTTCTCAAATTCCATCACTTGAGGATCCCACAATCCGTTATAAAGGCTTGAGGATAGCAAGGAAGATCCTTTGGTGGTTCGTGACTCGTTGGTGAAGAAAAACAAGAAAGAAATCCAACCAATTCTCCATTGATTCAAGGTTGGTATACAATACTCTGTTTTTCTTCTTCTTGGACAACATGCAATGTTTGATCAAGTTGAACAAATTATGTGCCTAAGATCCAAAATTGCTTTCTCTTTTTAGATATTAACACTTTCAAATACCTCGTTTCATTGTTTATTGTTATTCTTTATTCATTTACTTGTGTTATTTATTTTTCTAAAAATCAATCATCAATCATTTCTTTGGTTACCTATTTTTAAGCAATCAGTTGAGCAGTTTCTTCTTCAAATCTGAATTTCCAATTGAGTCCTCGTGGGATCGATACCCTTGGAATACTTCTAAGGTTTTTATTACTACGTGCGTAATGTATACTTGTACTAAGGGTCGCTGAATTTATCTTTATTATTATCTACCATCTTTTCTCGCATCCATCATTCAACGTCTGCCGCACCAAGTTTTTGGCGCCGTTGCCGGGGACCAAAAGTGAAACCAGTGTTGTTTATTTGAAATTGCGATTTTATTGCGACTGCATTTCTGTCTCAAAGGGAATTGGACTTTAATTTGCAATTGTTTGCTTTTGCAGGTTGAGTTAGTGCATGAACAAGGGGTGTCCACTTCTTGACATTGATCCTCAGAAAGAAAGAACCTTTCGTCGTTGTAGGAAAGAGCAAAGATGAAAGAGAAGGGAAAAACAAGAGTTGAGCACACAGGAACCTCTAGAAGAAGCTTCTTACATACAAGAGTTTTCGATGGAACAACCTGGAGTCGATCCTCAAGTTGATTCACAGAACCGTAGAAGGGAGCAAAATGGTGGGAGAATTCCTCCAGTTCCTCCAGTTCCACTGGTGCCACTGAAGGTGTACATATTACACATGCGGAAGCAATTGAAGATCGAAAGCACTTAA

mRNA sequence

ATGCGGTATTTGCTAACGACGGAGGAAAGGCGGATTCTGGCGGGCATTGGAGTGGGGAGGGGGATTGTGAAGCATGTAGTGGACGTGATTCCATCTTGCCGCTCCATAAACTCGACCCTCTCTCTTGCTGCCTCCAAATTTCCATCAATTTTCTTGTATCGTGGCTTCCTCCCATTAAAAAAAGTGTTCTCTGTTCTGATTGTGAGCTTGATATGTTCACTGTTTGATGAGGTTTACCTTCTAACTAATGCCTTTGCTTTGTGTTTCTTTTCTTCTGTTTATCTCCAATGTCTTTATGGTACGTGGCCTACTCTTGAATGTGCATTTCATATGTCCATGATCACGAATCCTAGAGGTCTTCTTTCCTCATACTCTAGGCCAGGCCGATGCCACGAGATCCTCTTGAAGAAACCAGAGCCAATCACAAATAATTGCACCGATGAGCGATGGCGATGGTTCGAGGGACACCCAGCTGCTCGTGGTCTGAGGAACAAGCCATTCCCCTACTTCGATGACCTAGCAATTGTTTTCGGGAAGGATAAGGCCAATGGAAAAGGTGCTTCGACTCCGAACGAAATGGCCACTGACTTGGATGATGACGTGAACACAGATGTTGAAGATTGTTATGTCCCTTCCCCTCCTATAGTTGAATCTGTGGTAGGTGAAGAATTTTATACCACCCGTTCGAGCAGGATTGACACGCCAGGATCATCACAGGGAAGTAAGAGGAGGTGCACAGTACCAGCAGACGCTGTCGACACATTTTGCACGGAGATGCGTTATGTGTCCACACAAATCGAGAAGATCGCGCTCTGGCCTCAACATAAGGATGAAATAGAGTCAGCTCGACGTAAACAATTGTATGGGGAACTACAGTCTATCCCGGGAATGGACATGGATGACTGTTTGCTTGTGGCCGAGACTCTGTTGGCTGATGACAAGAAATTTCGCTCATTCCTCGACTACCCCACTGAATGGAACCCCTTAGTGTTTCCTGAGATTGATTCAAGGTTCATGACCCAACAAGAAAAAGCAAGGGAAGCTAGAATTTCCCCAGAACGAAATGTGACTGCATTTCCGGAAAAACAGAGGCAGTTCCGAGTCTACCGCAGGATTATAGATTGCATTCGTGAATCATCTATGTCGGAGTCGAGCACAGAAATTTGCATAACGGTTGAGTTAGAACCTCTAGAAGAAGCTTCTTACATACAAGAGTTTTCGATGGAACAACCTGGAGTCGATCCTCAAGTTGATTCACAGAACCGTAGAAGGGAGCAAAATGGTGGGAGAATTCCTCCAGTTCCTCCAGTTCCACTGGTGCCACTGAAGGTGTACATATTACACATGCGGAAGCAATTGAAGATCGAAAGCACTTAA

Coding sequence (CDS)

ATGCGGTATTTGCTAACGACGGAGGAAAGGCGGATTCTGGCGGGCATTGGAGTGGGGAGGGGGATTGTGAAGCATGTAGTGGACGTGATTCCATCTTGCCGCTCCATAAACTCGACCCTCTCTCTTGCTGCCTCCAAATTTCCATCAATTTTCTTGTATCGTGGCTTCCTCCCATTAAAAAAAGTGTTCTCTGTTCTGATTGTGAGCTTGATATGTTCACTGTTTGATGAGGTTTACCTTCTAACTAATGCCTTTGCTTTGTGTTTCTTTTCTTCTGTTTATCTCCAATGTCTTTATGGTACGTGGCCTACTCTTGAATGTGCATTTCATATGTCCATGATCACGAATCCTAGAGGTCTTCTTTCCTCATACTCTAGGCCAGGCCGATGCCACGAGATCCTCTTGAAGAAACCAGAGCCAATCACAAATAATTGCACCGATGAGCGATGGCGATGGTTCGAGGGACACCCAGCTGCTCGTGGTCTGAGGAACAAGCCATTCCCCTACTTCGATGACCTAGCAATTGTTTTCGGGAAGGATAAGGCCAATGGAAAAGGTGCTTCGACTCCGAACGAAATGGCCACTGACTTGGATGATGACGTGAACACAGATGTTGAAGATTGTTATGTCCCTTCCCCTCCTATAGTTGAATCTGTGGTAGGTGAAGAATTTTATACCACCCGTTCGAGCAGGATTGACACGCCAGGATCATCACAGGGAAGTAAGAGGAGGTGCACAGTACCAGCAGACGCTGTCGACACATTTTGCACGGAGATGCGTTATGTGTCCACACAAATCGAGAAGATCGCGCTCTGGCCTCAACATAAGGATGAAATAGAGTCAGCTCGACGTAAACAATTGTATGGGGAACTACAGTCTATCCCGGGAATGGACATGGATGACTGTTTGCTTGTGGCCGAGACTCTGTTGGCTGATGACAAGAAATTTCGCTCATTCCTCGACTACCCCACTGAATGGAACCCCTTAGTGTTTCCTGAGATTGATTCAAGGTTCATGACCCAACAAGAAAAAGCAAGGGAAGCTAGAATTTCCCCAGAACGAAATGTGACTGCATTTCCGGAAAAACAGAGGCAGTTCCGAGTCTACCGCAGGATTATAGATTGCATTCGTGAATCATCTATGTCGGAGTCGAGCACAGAAATTTGCATAACGGTTGAGTTAGAACCTCTAGAAGAAGCTTCTTACATACAAGAGTTTTCGATGGAACAACCTGGAGTCGATCCTCAAGTTGATTCACAGAACCGTAGAAGGGAGCAAAATGGTGGGAGAATTCCTCCAGTTCCTCCAGTTCCACTGGTGCCACTGAAGGTGTACATATTACACATGCGGAAGCAATTGAAGATCGAAAGCACTTAA

Protein sequence

MRYLLTTEERRILAGIGVGRGIVKHVVDVIPSCRSINSTLSLAASKFPSIFLYRGFLPLKKVFSVLIVSLICSLFDEVYLLTNAFALCFFSSVYLQCLYGTWPTLECAFHMSMITNPRGLLSSYSRPGRCHEILLKKPEPITNNCTDERWRWFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDLDDDVNTDVEDCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCTVPADAVDTFCTEMRYVSTQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPTEWNPLVFPEIDSRFMTQQEKAREARISPERNVTAFPEKQRQFRVYRRIIDCIRESSMSESSTEICITVELEPLEEASYIQEFSMEQPGVDPQVDSQNRRREQNGGRIPPVPPVPLVPLKVYILHMRKQLKIEST

Homology

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BLAST of Spg010913 vs. NCBI nr
Match: TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 171.0 bits (432), Expect = 2.4e-38
Identity = 87/178 (48.88%), Postives = 118/178 (66.29%), Query Frame = 0


Query: 152 WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVE 211
           W +GHP A+GL NKPFPYF DL +VFG+D+A G    TP EM++       +DD++ ++E
Sbjct: 219 WVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLE 278

Query: 212 DCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCTVPADAVDTFCTEMRYVSTQI 271
           D  +P+P  +E   GE+  +T +S     GSS+ SK+R +   D +DTF   MR  S +I
Sbjct: 279 DFDIPNPHGLEPPSGEDMPSTPTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEI 338

Query: 272 EKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPT 325
            KIA W + K EIES+  K+LY ELQ+IPGMD+DDCL+VAE+LL D     +FLDYPT
Sbjct: 339 GKIATWQREKMEIESSLHKRLYAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPT 396

[Close]

BLAST of Spg010913 vs. NCBI nr
Match: TYK10886.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 164.9 bits (416), Expect = 1.7e-36
Identity = 84/177 (47.46%), Postives = 114/177 (64.41%), Query Frame = 0


Query: 152 WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVE 211
           W +GHP ARGL NK FPYF DL I+FG+D+A G    TP EM   +     +DD++ ++E
Sbjct: 28  WVKGHPNARGLLNKSFPYFYDLKIMFGRDRATGGRCKTPVEMGLQIARDTEEDDMDINLE 87

Query: 212 DCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCTVPADAVDTFCTEMRYVSTQI 271
           D  +P+P  +E   GE+  +T +S     GSS+ SK+R +   D +DTFC  MR  S +I
Sbjct: 88  DFDIPNPHGLEPPSGEDMSSTPTSMAYDVGSSRPSKKRRSYSEDLMDTFCASMRETSKEI 147

Query: 272 EKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP 324
            KI  W + K EIES+  K+LY ELQ+IPGMD+DDCL+V E+LL D     +FL+YP
Sbjct: 148 RKITAWQREKMEIESSIHKRLYAELQTIPGMDVDDCLIVVESLLPDPIMLHTFLNYP 204

[Close]

BLAST of Spg010913 vs. NCBI nr
Match: XP_008460440.1 (PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo])

HSP 1 Score: 164.5 bits (415), Expect = 2.2e-36
Identity = 85/177 (48.02%), Postives = 114/177 (64.41%), Query Frame = 0


Query: 152 WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVE 211
           W +GHP ARGL NK FPYF DL I+FG+D+A G    TP EM   +     +DD++ ++E
Sbjct: 27  WVKGHPNARGLLNKSFPYFYDLKIMFGRDRATGGRCKTPIEMGLQIARDTEEDDMDINLE 86

Query: 212 DCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCTVPADAVDTFCTEMRYVSTQI 271
           D  +P+P  +E   GE+  +T +S     GSS+ SK+R +   D +DTF   MR  S +I
Sbjct: 87  DFDIPNPHGLEPPSGEDMSSTPTSMAHDVGSSKPSKKRRSYSEDLMDTFRASMRETSKEI 146

Query: 272 EKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP 324
            KIA W + K EIES+  K+LY ELQ+IPGMD+DDCL+V E+LL D     +FLDYP
Sbjct: 147 RKIAAWQREKMEIESSIHKRLYAELQTIPGMDVDDCLIVVESLLPDPIMLHTFLDYP 203

[Close]

BLAST of Spg010913 vs. NCBI nr
Match: KAA0067273.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 164.5 bits (415), Expect = 2.2e-36
Identity = 85/177 (48.02%), Postives = 114/177 (64.41%), Query Frame = 0


Query: 152 WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVE 211
           W +GHP ARGL NK FPYF DL I+FG+D+A G    TP EM   +     +DD++ ++E
Sbjct: 28  WVKGHPNARGLLNKSFPYFYDLKIMFGRDRATGGRCKTPIEMGLQIARDTEEDDMDINLE 87

Query: 212 DCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCTVPADAVDTFCTEMRYVSTQI 271
           D  +P+P  +E   GE+  +T +S     GSS+ SK+R +   D +DTF   MR  S +I
Sbjct: 88  DFDIPNPHGLEPPSGEDMSSTPTSMAHDVGSSKPSKKRRSYSEDLMDTFRASMRETSKEI 147

Query: 272 EKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP 324
            KIA W + K EIES+  K+LY ELQ+IPGMD+DDCL+V E+LL D     +FLDYP
Sbjct: 148 RKIAAWQREKMEIESSIHKRLYAELQTIPGMDVDDCLIVVESLLPDPIMLHTFLDYP 204

[Close]

BLAST of Spg010913 vs. NCBI nr
Match: XP_022158565.1 (uncharacterized protein LOC111025018 [Momordica charantia])

HSP 1 Score: 125.2 bits (313), Expect = 1.5e-24
Identity = 68/186 (36.56%), Postives = 108/186 (58.06%), Query Frame = 0


Query: 152 WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATD----LDDDVNTDVED 211
           W + HP A+GLRNKP P++DDL + FGKD+A G     P +MA+     + +D + + +D
Sbjct: 24  WVKSHPNAKGLRNKP-PHYDDLTVAFGKDRATGANLDCPVDMASSAAATIAEDAHFEAQD 83

Query: 212 CYVPSPPI---VESVVGEEFYTTRSSRIDTPGSSQGSKR-RCTVPADAVDTFCTEMRYVS 271
            Y+P PP+    E  + E+   T +S+     SS GSKR R    ++ VD   T MR  +
Sbjct: 84  FYIPDPPMFNTTEDAIEEDLPNTPTSKPTIGTSSGGSKRKRSGYTSEMVDVVRTNMRMQT 143

Query: 272 TQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP 330
             +EK+A WP  K+E + ARRK ++ +L+ IP ++ +D + +   L+ + KK  SFL+ P
Sbjct: 144 AHLEKMATWPDKKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTNVKKSISFLEVP 203

[Close]

BLAST of Spg010913 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.1e-38
Identity = 87/178 (48.88%), Postives = 118/178 (66.29%), Query Frame = 0


Query: 152 WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVE 211
           W +GHP A+GL NKPFPYF DL +VFG+D+A G    TP EM++       +DD++ ++E
Sbjct: 219 WVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKTPVEMSSQTARDTEEDDMDINLE 278

Query: 212 DCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCTVPADAVDTFCTEMRYVSTQI 271
           D  +P+P  +E   GE+  +T +S     GSS+ SK+R +   D +DTF   MR  S +I
Sbjct: 279 DFDIPNPHGLEPPSGEDMPSTPTSMTHDAGSSRPSKKRRSYSGDLMDTFRASMRETSKEI 338

Query: 272 EKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYPT 325
            KIA W + K EIES+  K+LY ELQ+IPGMD+DDCL+VAE+LL D     +FLDYPT
Sbjct: 339 GKIATWQREKMEIESSLHKRLYAELQTIPGMDVDDCLIVAESLLPDPTMLHAFLDYPT 396

[Close]

BLAST of Spg010913 vs. ExPASy TrEMBL
Match: A0A5D3CKC1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00580 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 8.2e-37
Identity = 84/177 (47.46%), Postives = 114/177 (64.41%), Query Frame = 0


Query: 152 WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVE 211
           W +GHP ARGL NK FPYF DL I+FG+D+A G    TP EM   +     +DD++ ++E
Sbjct: 28  WVKGHPNARGLLNKSFPYFYDLKIMFGRDRATGGRCKTPVEMGLQIARDTEEDDMDINLE 87

Query: 212 DCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCTVPADAVDTFCTEMRYVSTQI 271
           D  +P+P  +E   GE+  +T +S     GSS+ SK+R +   D +DTFC  MR  S +I
Sbjct: 88  DFDIPNPHGLEPPSGEDMSSTPTSMAYDVGSSRPSKKRRSYSEDLMDTFCASMRETSKEI 147

Query: 272 EKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP 324
            KI  W + K EIES+  K+LY ELQ+IPGMD+DDCL+V E+LL D     +FL+YP
Sbjct: 148 RKITAWQREKMEIESSIHKRLYAELQTIPGMDVDDCLIVVESLLPDPIMLHTFLNYP 204

[Close]

BLAST of Spg010913 vs. ExPASy TrEMBL
Match: A0A5A7VGQ0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G00930 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.1e-36
Identity = 85/177 (48.02%), Postives = 114/177 (64.41%), Query Frame = 0


Query: 152 WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVE 211
           W +GHP ARGL NK FPYF DL I+FG+D+A G    TP EM   +     +DD++ ++E
Sbjct: 28  WVKGHPNARGLLNKSFPYFYDLKIMFGRDRATGGRCKTPIEMGLQIARDTEEDDMDINLE 87

Query: 212 DCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCTVPADAVDTFCTEMRYVSTQI 271
           D  +P+P  +E   GE+  +T +S     GSS+ SK+R +   D +DTF   MR  S +I
Sbjct: 88  DFDIPNPHGLEPPSGEDMSSTPTSMAHDVGSSKPSKKRRSYSEDLMDTFRASMRETSKEI 147

Query: 272 EKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP 324
            KIA W + K EIES+  K+LY ELQ+IPGMD+DDCL+V E+LL D     +FLDYP
Sbjct: 148 RKIAAWQREKMEIESSIHKRLYAELQTIPGMDVDDCLIVVESLLPDPIMLHTFLDYP 204

[Close]

BLAST of Spg010913 vs. ExPASy TrEMBL
Match: A0A1S3CC17 (uncharacterized protein LOC103499248 OS=Cucumis melo OX=3656 GN=LOC103499248 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.1e-36
Identity = 85/177 (48.02%), Postives = 114/177 (64.41%), Query Frame = 0


Query: 152 WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATDL-----DDDVNTDVE 211
           W +GHP ARGL NK FPYF DL I+FG+D+A G    TP EM   +     +DD++ ++E
Sbjct: 27  WVKGHPNARGLLNKSFPYFYDLKIMFGRDRATGGRCKTPIEMGLQIARDTEEDDMDINLE 86

Query: 212 DCYVPSPPIVESVVGEEFYTTRSSRIDTPGSSQGSKRRCTVPADAVDTFCTEMRYVSTQI 271
           D  +P+P  +E   GE+  +T +S     GSS+ SK+R +   D +DTF   MR  S +I
Sbjct: 87  DFDIPNPHGLEPPSGEDMSSTPTSMAHDVGSSKPSKKRRSYSEDLMDTFRASMRETSKEI 146

Query: 272 EKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP 324
            KIA W + K EIES+  K+LY ELQ+IPGMD+DDCL+V E+LL D     +FLDYP
Sbjct: 147 RKIAAWQREKMEIESSIHKRLYAELQTIPGMDVDDCLIVVESLLPDPIMLHTFLDYP 203

[Close]

BLAST of Spg010913 vs. ExPASy TrEMBL
Match: A0A6J1DW73 (uncharacterized protein LOC111025018 OS=Momordica charantia OX=3673 GN=LOC111025018 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 7.2e-25
Identity = 68/186 (36.56%), Postives = 108/186 (58.06%), Query Frame = 0


Query: 152 WFEGHPAARGLRNKPFPYFDDLAIVFGKDKANGKGASTPNEMATD----LDDDVNTDVED 211
           W + HP A+GLRNKP P++DDL + FGKD+A G     P +MA+     + +D + + +D
Sbjct: 24  WVKSHPNAKGLRNKP-PHYDDLTVAFGKDRATGANLDCPVDMASSAAATIAEDAHFEAQD 83

Query: 212 CYVPSPPI---VESVVGEEFYTTRSSRIDTPGSSQGSKR-RCTVPADAVDTFCTEMRYVS 271
            Y+P PP+    E  + E+   T +S+     SS GSKR R    ++ VD   T MR  +
Sbjct: 84  FYIPDPPMFNTTEDAIEEDLPNTPTSKPTIGTSSGGSKRKRSGYTSEMVDVVRTNMRMQT 143

Query: 272 TQIEKIALWPQHKDEIESARRKQLYGELQSIPGMDMDDCLLVAETLLADDKKFRSFLDYP 330
             +EK+A WP  K+E + ARRK ++ +L+ IP ++ +D + +   L+ + KK  SFL+ P
Sbjct: 144 AHLEKMATWPDKKEEKKIARRKIVHDQLKQIPNLEANDYVRLVGILMTNVKKSISFLEVP 203

The following BLAST results are available for this feature:

BLAST of Spg010913 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK07921.1	2.4e-38	48.88	hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]	[more]
TYK10886.1	1.7e-36	47.46	retrotransposon protein [Cucumis melo var. makuwa]	[more]
XP_008460440.1	2.2e-36	48.02	PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo]	[more]
KAA0067273.1	2.2e-36	48.02	retrotransposon protein [Cucumis melo var. makuwa]	[more]
XP_022158565.1	1.5e-24	36.56	uncharacterized protein LOC111025018 [Momordica charantia]	[more]

BLAST of Spg010913 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg010913 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C7T4	1.1e-38	48.88	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CKC1	8.2e-37	47.46	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VGQ0	1.1e-36	48.02	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3CC17	1.1e-36	48.02	uncharacterized protein LOC103499248 OS=Cucumis melo OX=3656 GN=LOC103499248 PE=...	[more]
A0A6J1DW73	7.2e-25	36.56	uncharacterized protein LOC111025018 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Spg010913 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 409..433
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 147..325
None	No IPR available	PANTHER	PTHR46250:SF3	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 147..325

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg010913.1	Spg010913.1	mRNA