Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAATCAACGTGCATGACGAGCAAAAACGTAGGAGAAGGGAATGCAAAAGAGATAAGTGAGTTGTTCGGGGTGGGGGAATACCTGAGACTCCTCTCCCAAATGGGAAGAAACAAAAAAACAGATGTTCAACAGAGTCGGGGAGAGAGTTTGGAAGCTTTTGCAAGGGTGGAAAGGGAAACTCTTCTCTCTCAGGGGAAAGGAGATCCTCATCAAAGCAATAGCCCAAGTCATACCCAATTATACTATGAGCTGCTTTAAGCTCCCAAATAATATCTGTGAGGAGTTAAATAGGTTGTGTGCCAAATTTTGGTGGGATTCATCAAACCAAAAGAAGAAATGTCACTGGATGGGCTAGGATAAGATGTGTGAGAGCAAAGACAGAGGAGGAATGGGGTTCAAGGACATTCACCTCTTCAACAAAGCGTTCCTTGTTAAGCATAGTTGGAGGATTATTAGAAACCCACAAAGCCTTATGGCAAGAGTACTTAGGGGAAATACTTCCACGATGGGGACTTCCTCAAAGCCAAGGAGGGGAGCAATCCCTCTTTTTCTTGGAGGAGCATAATTTGGGGAAGATCGCTATTCATGGAAGGCTATAGGTGGAGGATTGGAAATGGGGAGAGAATCCTTATAAAGGAGGACCCGTGGTTGGACAGAAGAGGAGCGAGGAAGCCAGTTTGGGTGAAGGACGAGTGGAAGTACAAAAGAGTTATTGATCTCTTAAACGCCCAAGGAGAGTGGAAAGAAGAGTTCGTAAGAGAGGCCTTCCTTCTTGCAGACTCCAAGGATGTGCTGAACATGCCTAGAAGGGGGACAAATATGGAAGATACCATTATATGGAATCAGGACCCCAAAGGAGCCTTCACCGTCAAGAGTGCTTACCATCTGGCTAAAAGCTTAAACTCGAAAGACAGAGCATCGCAATCGGACATGTCAAAGAACAAGGCAGTGTGGAAATCAATGTGGAATGCTTCTTGTCTTCCTAGAGCAAAAGTCATAGCCTAGAAAATTCTCCAGGACATCATCCCTACCAAAACTAATATTTGTAAAAAGGGGGTGGACACTAATATCGTGTGTTGTGTGCGCAGGTCGCAGAGGGAAGACACGGTGCACCTATTCTGGGAGTTTGCCAAGAGAATATGGAATGAATTCTTCCCTAATTCAGCCCTTTTTCTAAACAATTGTAGGAATGGGAGGCAGCCAGTAGACATTTGGGACAACATGCGTAGGATTCTAAGCAAAGAAGACATAGAGAAAGCGATAATTGTCCTATGGACCCTATGGAACGCGAGGAACTCGAGCAATCAAAGTAAAAACTCCCCTGATTTCAGACAAACATGTTGCAATATTAACAAATTCATCGAAGACAGACCTGGGGGGGTCATCTCGAAGCAGAAGCCCTCAAAATTAAAGAGCCTCCTCAATCACCTCTAATGGGAGTCGCCGGAGCCGGAGTGCTGGAAGCTTAATGCAGATGCGTCCTGGAACAAGAAGATGGAAATAGGTGGGCTGGGATGGGCCATACGTGACTCCGAAGGATCTTTGATGGGAGCGAGCTGCAAGCGATTGGACAAAAAGTGGCCGATCAAATACATGGAGGTCAGAGCAATCCTCGAGGGGTTAGATGATTACCTGAATATGGAAGTTAGAGAGCGGATGAGATTCAAGATCGTTGTTGAATCCGACTCCAACGAAGCTATTGACACCTTGAATCGTGAGGTGGAAGACTTAACGGAGATGGCTGGGGTCGTGAACGAACTTAGAGAAAAGGGGGATAATGATTTTGTCGTCTTTGTCAAATGCCCCCGTCTCTGCAACACCCTGGCTCACGATCTTGCACGAGCAGTTACTTCCCATGGCGATTTTGTGTGGAATTGTTATTGCTCTCTTCCGTTAGTTAGGGAAGATGAAATGTTTTGGAGGGAAAATGATTTCCCCAGCTGGTTTTTTTAG
mRNA sequence
ATGGAGAAATCAACGTGCATGACGAGCAAAAACGTAGGAGAAGGGAATGCAAAAGAGATAATTTGGGTGAAGGACGAGTGGAAGTACAAAAGAGTTATTGATCTCTTAAACGCCCAAGGAGAGTGGAAAGAAGAGTTCGTAAGAGAGGCCTTCCTTCTTGCAGACTCCAAGGATGTGCTGAACATGCCTAGAAGGGGGACAAATATGGAAGATACCATTATATGGAATCAGGACCCCAAAGGAGCCTTCACCGTCAAGAGTGCTTACCATCTGGCTAAAAGCTTAAACTCGAAAGACAGAGCATCGCAATCGGACATGTCAAAGAACAAGGCAGTGTCGCAGAGGGAAGACACGGTGCACCTATTCTGGGAGTTTGCCAAGAGAATATGGAATGAATTCTTCCCTAATTCAGCCCTTTTTCTAAACAATTGTAGGAATGGGAGGCAGCCAGTAGACATTTGGGACAACATGCGTAGGATTCTAAGCAAAGAAGACATAGAGAAAGCGATAATTGTCCTATGGACCCTATGGAACGCGAGGAACTCGAGCAATCAAAGTAAAAACTCCCCTGATTTCAGACAAACATATGCGTCCTGGAACAAGAAGATGGAAATAGGTGGGCTGGGATGGGCCATACGTGACTCCGAAGGATCTTTGATGGGAGCGAGCTGCAAGCGATTGGACAAAAAGTGGCCGATCAAATACATGGAGGTCAGAGCAATCCTCGAGGGGTTAGATGATTACCTGAATATGGAAGTTAGAGAGCGGATGAGATTCAAGATCGTTGTTGAATCCGACTCCAACGAAGCTATTGACACCTTGAATCGTGAGGTGGAAGACTTAACGGAGATGGCTGGGGTCGTGAACGAACTTAGAGAAAAGGGGGATAATGATTTTGTCGTCTTTGTCAAATGCCCCCGTCTCTGCAACACCCTGGCTCACGATCTTGCACGAGCAGTTACTTCCCATGGCGATTTTGTGTGGAATTGTTATTGCTCTCTTCCGTTAGTTAGGGAAGATGAAATGTTTTGGAGGGAAAATGATTTCCCCAGCTGGTTTTTTTAG
Coding sequence (CDS)
ATGGAGAAATCAACGTGCATGACGAGCAAAAACGTAGGAGAAGGGAATGCAAAAGAGATAATTTGGGTGAAGGACGAGTGGAAGTACAAAAGAGTTATTGATCTCTTAAACGCCCAAGGAGAGTGGAAAGAAGAGTTCGTAAGAGAGGCCTTCCTTCTTGCAGACTCCAAGGATGTGCTGAACATGCCTAGAAGGGGGACAAATATGGAAGATACCATTATATGGAATCAGGACCCCAAAGGAGCCTTCACCGTCAAGAGTGCTTACCATCTGGCTAAAAGCTTAAACTCGAAAGACAGAGCATCGCAATCGGACATGTCAAAGAACAAGGCAGTGTCGCAGAGGGAAGACACGGTGCACCTATTCTGGGAGTTTGCCAAGAGAATATGGAATGAATTCTTCCCTAATTCAGCCCTTTTTCTAAACAATTGTAGGAATGGGAGGCAGCCAGTAGACATTTGGGACAACATGCGTAGGATTCTAAGCAAAGAAGACATAGAGAAAGCGATAATTGTCCTATGGACCCTATGGAACGCGAGGAACTCGAGCAATCAAAGTAAAAACTCCCCTGATTTCAGACAAACATATGCGTCCTGGAACAAGAAGATGGAAATAGGTGGGCTGGGATGGGCCATACGTGACTCCGAAGGATCTTTGATGGGAGCGAGCTGCAAGCGATTGGACAAAAAGTGGCCGATCAAATACATGGAGGTCAGAGCAATCCTCGAGGGGTTAGATGATTACCTGAATATGGAAGTTAGAGAGCGGATGAGATTCAAGATCGTTGTTGAATCCGACTCCAACGAAGCTATTGACACCTTGAATCGTGAGGTGGAAGACTTAACGGAGATGGCTGGGGTCGTGAACGAACTTAGAGAAAAGGGGGATAATGATTTTGTCGTCTTTGTCAAATGCCCCCGTCTCTGCAACACCCTGGCTCACGATCTTGCACGAGCAGTTACTTCCCATGGCGATTTTGTGTGGAATTGTTATTGCTCTCTTCCGTTAGTTAGGGAAGATGAAATGTTTTGGAGGGAAAATGATTTCCCCAGCTGGTTTTTTTAG
Protein sequence
MEKSTCMTSKNVGEGNAKEIIWVKDEWKYKRVIDLLNAQGEWKEEFVREAFLLADSKDVLNMPRRGTNMEDTIIWNQDPKGAFTVKSAYHLAKSLNSKDRASQSDMSKNKAVSQREDTVHLFWEFAKRIWNEFFPNSALFLNNCRNGRQPVDIWDNMRRILSKEDIEKAIIVLWTLWNARNSSNQSKNSPDFRQTYASWNKKMEIGGLGWAIRDSEGSLMGASCKRLDKKWPIKYMEVRAILEGLDDYLNMEVRERMRFKIVVESDSNEAIDTLNREVEDLTEMAGVVNELREKGDNDFVVFVKCPRLCNTLAHDLARAVTSHGDFVWNCYCSLPLVREDEMFWRENDFPSWFF
Homology
BLAST of Spg010865 vs. NCBI nr
Match:
XP_015387358.1 (uncharacterized protein LOC107177672 [Citrus sinensis])
HSP 1 Score: 90.1 bits (222), Expect = 4.1e-14
Identity = 81/367 (22.07%), Postives = 155/367 (42.23%), Query Frame = 0
Query: 32 VIDLLNAQGEWKEEFVREAFLLADSKDVLNMPRRGTNMEDTIIWNQDPKGAFTVKSAYHL 91
V D ++ + +W EE V + F ++ +L P T ED +IW+ D G ++V+S Y +
Sbjct: 21 VADFIDDKNQWMEEKVVQCFPEEVAQRILRTPLPRTPQEDLMIWHFDKYGCYSVRSGYQV 80
Query: 92 AKSLNSKDRASQSDMSKNKAVSQREDTVHLFWE---FAKRIWNEFFP--------NSALF 151
A + D SD SK + W+ + ++W P +L
Sbjct: 81 AVRMKFPDNPECSDSSKTQ------------WKPIIYGGKMWWGIQPVKDVIVKVRMSLV 140
Query: 152 LNNCRNGRQ------PVDIWDNMRRILS---KEDIEKAIIVLWTLWNARN---------- 211
L C+ R+ DI ++ + S K++IE+ + + W +W ARN
Sbjct: 141 LMECKAARKVWKLLSQHDILSMLQELASRRMKKEIEQILAICWAIWYARNRFVIEGKQEE 200
Query: 212 -------------------SSNQSKNSPDFRQTYASW----NKKMEI------------G 271
+ N S ++ W +K ++
Sbjct: 201 PKLTAARASAIVELYKRIKTQNGPARSIHYQNNQQIWTPPPQRKYKVNVDAAIQMAGLKA 260
Query: 272 GLGWAIRDSEGSLMGASCKRLDKKWPIKYMEVRAILEGLDDYLNMEVRERMRF-KIVVES 329
GLG +R+S G ++ A+ K++ + + ME A+L G+ +V +++ + +++ES
Sbjct: 261 GLGAVVRNSNGKIIAAAVKKVCFQGTVASMEAEAVLFGI------QVAQQVEYLPMIIES 320
BLAST of Spg010865 vs. NCBI nr
Match:
EEC84982.1 (hypothetical protein OsI_32248 [Oryza sativa Indica Group] >EEE62926.1 hypothetical protein OsJ_17731 [Oryza sativa Japonica Group])
HSP 1 Score: 88.2 bits (217), Expect = 1.6e-13
Identity = 88/345 (25.51%), Postives = 139/345 (40.29%), Query Frame = 0
Query: 35 LLNAQGEWKEEFVREAFLLADSKDVLNMPRRGTNMEDTIIWNQDPKGAFTVKSAYHLAKS 94
+L QG+W VR+ F D ++L++P R T+MED W+ D +G F+VKSAYH+ +
Sbjct: 540 MLARQGDWDVSLVRDIFWEEDVANILSIPVR-TDMEDFAAWHYDTRGIFSVKSAYHVLED 599
Query: 95 LNSKDRASQSDMSKNKAVSQREDTVHLFWEF--AKRIWNEF-FPNSALFLNNCRNGRQPV 154
+ Q+D ED H F + + W+ N L L N + +
Sbjct: 600 QRERTSVRQTDTLCLVCKRFDEDGGHCFLKCKPVRLCWSLLQKENIRLDLMNLNSAK--- 659
Query: 155 DIWDNMRRILS--KEDIEKAIIVLWTLWNARNSSN------------------------- 214
D +R ILS +E + +++LW W ARN N
Sbjct: 660 ---DVVRHILSLGEECCMEVVLLLWNWWFARNKINAGEHGFSPEEVVFRVKNMLHELSAL 719
Query: 215 ----QSKNSPDFRQTYASWNKKMEI------------GGLGWAIRDSEGSLMGASCKRLD 274
Q + + + ++ K+++ GG G+ +RD G + A RL+
Sbjct: 720 KPVEQRRGNTEIKRWLPPQRGKLKLNVDGAFHADRKTGGWGFVLRDEVGHALCAGAGRLE 779
Query: 275 KKWPIKYMEVRAILEGLDDYLNMEVRERMRFKIVVESDSNEAIDTLNREVEDLTEMAGVV 329
E +A L L L V + +ESDS+ + + DL A +
Sbjct: 780 FVSDAISAEAKACLAALLAILVQGVS-----VVDIESDSDLLVSAIKSSSHDLATGATIF 839
BLAST of Spg010865 vs. NCBI nr
Match:
XP_024042628.1 (uncharacterized protein LOC112099434 [Citrus clementina])
HSP 1 Score: 85.1 bits (209), Expect = 1.3e-12
Identity = 66/293 (22.53%), Postives = 117/293 (39.93%), Query Frame = 0
Query: 32 VIDLLNAQGEWKEEFVREAFLLADSKDVLNMPRRGTNMEDTIIWNQDPKGAFTVKSAYHL 91
V +L+ WKE + + F+ D+ ++N+P + D +IW+ D KG ++VKS Y +
Sbjct: 339 VSELITNDNRWKEALLFDQFVQEDADAIMNIPLPRNHSRDQVIWHYDRKGEYSVKSGYQI 398
Query: 92 AKSLNSKDRASQSDMSKNKAVSQREDTVHLFWE--FAKRIWNEFFPNSALFLNNCRN--G 151
A + D S S + N Q E+ H E A++ W F + ++ G
Sbjct: 399 ALKMKVPDTPSSSVNNNN----QSENIFHALVECKAARKTWEH-----TKFAESFKDMVG 458
Query: 152 RQPVDIWDNMRRILSKEDIEKAIIVLWTLWNARNSSNQSKNSPDFRQTYA---------- 211
+ ++ + + +SK D E + WT+W ARN P ++ + A
Sbjct: 459 PDMLTVFQELVKKMSKTDFELLAVTCWTIWTARNKLIFEAKKPGYQMSVATAEALLEAYQ 518
Query: 212 --------------------------SW---------NKKMEIGGLGWAIRDSEGSLMGA 271
SW K+ + GLG IRD+ G+++ A
Sbjct: 519 RVKPSGLICGADKEKKTAKAWLPPPPSWFKVNVDAAIRKEKNLSGLGAVIRDATGNIIAA 578
Query: 272 SCKRLDKKWPIKYMEVRAILEGLDDYLNMEVRERMRFKIVVESDSNEAIDTLN 276
+ K + Y E A+ GL ++ + +++E+DS D +N
Sbjct: 579 AVKTTRFHGNVSYAEAEAVRWGLQVAVDAGLT-----SLIIETDSQMVADLIN 617
BLAST of Spg010865 vs. NCBI nr
Match:
XP_042987456.1 (uncharacterized protein LOC122315549 [Carya illinoinensis])
HSP 1 Score: 82.8 bits (203), Expect = 6.5e-12
Identity = 83/324 (25.62%), Postives = 139/324 (42.90%), Query Frame = 0
Query: 31 RVIDLLNAQGEWKEEFVREAFLLADSKDVLNMPRRGTNMEDTIIWNQDPKGAFTVKSAYH 90
RV +L+ + GEW E ++ F + + + ++P +N +D +IW F VKSAY
Sbjct: 269 RVSELI-SNGEWDVELIKSIFRQEEVEQICSIPISKSNADDRLIWGCTKTRLFIVKSAYQ 328
Query: 91 L-------AKSLNSK----DRASQSDMSKNKAVSQREDTV-HLFWE--FAKRIWNEFFPN 150
L K NS+ D+ +D SK E+TV H W A +W E
Sbjct: 329 LDMSRKEAVKGENSERIEGDKRWITDNSKCPICKVDEETVSHALWSCPAAADVWVESIKV 388
Query: 151 SALFLNNCRNGRQPVDIWDNMRRILSKEDIEKAIIVLWTLWNARNSSNQSKNSPDFRQTY 210
+ + ++ N + W+ M S+E++E+ ++V+ ++W S P
Sbjct: 389 TQKWKSDETN---LLVFWEKMMERASREELEEIVMVMRSIWRDVRWSR-----PKELSVK 448
Query: 211 ASW----NKKMEIGGLGWAIRDSEGSLMGASCKRLDKKWPIKYMEVRAILEGLDDYLNME 270
A+W +KK G+G I D EG ++ A+ + + +Y I E ME
Sbjct: 449 ANWDAAIDKKERKVGIGVVISDEEGEILVAAGEHM------RYAIDAVIAESFALRKAME 508
Query: 271 VRERMRF-KIVVESDSNEAIDTLNREVEDLTEMAGVVNEL------REKGDNDFVVFVKC 329
V F ++ E D+ ++ +N E +D+T V+ ++ REK F+
Sbjct: 509 VCRDFNFNNVLFEGDAQNIVNAVNAETKDMTRYGSVIEDVKCLLKGREKWSVRFIY---- 568
BLAST of Spg010865 vs. NCBI nr
Match:
XP_024034843.1 (uncharacterized protein LOC112096145 [Citrus clementina])
HSP 1 Score: 82.4 bits (202), Expect = 8.5e-12
Identity = 68/301 (22.59%), Postives = 121/301 (40.20%), Query Frame = 0
Query: 32 VIDLLNAQGEWKEEFVREAFLLADSKDVLNMPRRGTNMEDTIIWNQDPKGAFTVKSAYHL 91
V D ++ + +WKEE + + F ++ +L +P T ED +IW D G ++V+S Y +
Sbjct: 48 VADFIDDKNQWKEEKIEQCFTKEVAQKILKIPLPRTPQEDILIWQFDKHGCYSVRSGYQV 107
Query: 92 AKSLNSKDRASQSDMSKNKAVSQREDTVHLFWEFAKRIW--NEFFPNSALFLNNCRNGRQ 151
A + D SD SK + W+ A+++W +F+ + L +
Sbjct: 108 ALKMKFPDNPECSDSSKTQ------------WKAARKVWKLTDFYEDVKLMAQ-----QG 167
Query: 152 PVDIWDNMRRILSKEDIEKAIIVLWTLWNARNS--------------------------- 211
+ + + K+++E+ I V W +W ARN
Sbjct: 168 ILSMLQGLASRRKKKELEQIIAVCWAIWYARNRFMYEGKQQEPKLTAARASAILETYRRI 227
Query: 212 --SNQSKNSPDFRQTYASWNK------KMEI----------GGLGWAIRDSEGSLMGASC 271
N S R + W K+++ GLG IR+S ++ A+
Sbjct: 228 KIQNGPARSIHHRNSQQIWKPPPDGKYKVDVDAAIQMSGPKAGLGVVIRNSNEKIIAAAV 287
Query: 272 KRLDKKWPIKYMEVRAILEGLDDYLNMEVRERMRFKIVVESDSNEAIDTLNREVEDLTEM 286
KR+ K + ME AIL G+ E +++ESDS E ++ + +TE+
Sbjct: 288 KRVCYKGTVACMEAEAILFGIQVAQQAEC-----LLMIIESDSIEVVELVLNRKGSMTEI 326
BLAST of Spg010865 vs. ExPASy TrEMBL
Match:
A0A803PM68 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 82.8 bits (203), Expect = 3.2e-12
Identity = 88/394 (22.34%), Postives = 154/394 (39.09%), Query Frame = 0
Query: 32 VIDLLNAQGEWKEEFVREAFLLADSKDVLNMPRRGTNMEDTIIWNQDPKGAFTVKSAYHL 91
V+DL+ GEW EEF+R F D++ +L MP +ED I+W+ G ++V+S Y +
Sbjct: 300 VVDLMKGNGEWDEEFIRAFFNPTDAELILGMPTSEWEIEDKILWHYSKNGEYSVRSGYRM 359
Query: 92 AKSLNSKDRASQSDMSKN-----KAVSQREDTVHLFWEFAKRIWNEFFP-NSAL------ 151
A +L D S ++ ++ + H W+ A + + P NSAL
Sbjct: 360 AAALQVHDIQSNTEATERWWRLLWKLKIPPKVKHFVWKMA----HSWLPTNSALAYRKVQ 419
Query: 152 ---FLNNCRNG------------RQPVDIWD---------------------NMRRILSK 211
+ C +G R ++W + + SK
Sbjct: 420 VEPYCTRCSSGAYENVFHALWGCRVNCEVWKLTGFHGRIKRQGKEDVLAFLMRLSGMFSK 479
Query: 212 EDIEKAIIVLWTLWNARNSSNQSKNSP--------------DFR-----------QTYAS 271
+D E +I+ W LW RNS N + P +F+ + A
Sbjct: 480 DDWEFFLILSWNLWYIRNSVNHGGHKPQAAAVVDWCGRFLSEFKDGCGPKKHGVARAEAR 539
Query: 272 WNKKM------------EIGGLGW-----AIRDSEGSLMGASCKRLDKKWPIKYMEVRAI 329
W M ++GG G+ +RD G + A+ + K + + E+ AI
Sbjct: 540 WQPPMRDSFKVNVDAGVKVGGGGYTSFSSVVRDHTGRVCAANATVVRKVYSPLHAELVAI 599
BLAST of Spg010865 vs. ExPASy TrEMBL
Match:
A0A803P3X4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 82.4 bits (202), Expect = 4.1e-12
Identity = 87/388 (22.42%), Postives = 148/388 (38.14%), Query Frame = 0
Query: 32 VIDLLNAQGEWKEEFVREAFLLADSKDVLNMPRRGTNMEDTIIWNQDPKGAFTVKSAYHL 91
VIDL GEW EEFVR F D+ +L MP ++ED ++W+ G ++V+S Y +
Sbjct: 1385 VIDLKKINGEWDEEFVRAVFNPTDADLILRMPTSEWDIEDKVLWHYSKDGEYSVRSGYRM 1444
Query: 92 AKSLNSKDRASQSDMSKN-----KAVSQREDTVHLFWEFAKRIWNEFFPNSAL------- 151
A +L +D S +++++ + H W+ A + + P +A+
Sbjct: 1445 AAALQVRDVQSDTEVTEKWWRLLWKLKIPPKVKHFVWKLA----HSWLPTNAVLARRNIP 1504
Query: 152 ---FLNNCRNG------------RQPVDIWDN---------------------MRRILSK 211
+ N C NG R ++W + + ILSK
Sbjct: 1505 VEPYCNRCFNGVYEDVFHAIWCCRVNREVWKSTGFYGKIQRQGSEDVLAFLMRISTILSK 1564
Query: 212 EDIEKAIIVLWTLWNARNSSNQSKNSP--------------DFRQT-----------YAS 271
E+ E +++ W LW RNS N + P +FR++ A
Sbjct: 1565 EEFEFFLVLSWNLWYVRNSVNHGGHKPQACAILEWCSKFLSEFRESNTPKRDRQVREAAR 1624
Query: 272 W----------------NKKMEIGGLGWAIRDSEGSLMGASCKRLDKKWPIKYMEVRAIL 329
W + + + +RD G + A+ L + + E++AI
Sbjct: 1625 WTPPGIDAFKINVDAGVRTEAGVASISSVVRDHAGMVHSAAATVLLQNMTPLHAELQAIA 1684
BLAST of Spg010865 vs. ExPASy TrEMBL
Match:
A0A1R3GTB5 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23588 PE=4 SV=1)
HSP 1 Score: 81.3 bits (199), Expect = 9.2e-12
Identity = 83/352 (23.58%), Postives = 146/352 (41.48%), Query Frame = 0
Query: 29 YKRVIDLL-NAQGEWKEEFVREAFLLADSKDVLNMPRRGTNMEDTIIWNQDPKGAFTVKS 88
Y V +L+ + + WKE+ + E F + +L++ +ED +IW G FTVKS
Sbjct: 1141 YGLVTELIDHDERHWKEDLLYELFQPTVVEAILDISLSSHRVEDKLIWAASKLGMFTVKS 1200
Query: 89 AYHLAKSLNSKDRASQSDMSKNKAV-----SQREDTVHLFWE--FAKRIWNEFFPNSALF 148
AYH+A+ + ++ D+ + + R +F+E +A+ +WN+ P F
Sbjct: 1201 AYHVARIMLDREVV---DVELRNPLWKLLWTARVSPKDVFFECYYARSVWNDIAPWMEDF 1260
Query: 149 LNNCRNGRQPVDIWDNMRRILSKED-IEKAIIVLWTLWNARNS---------SNQ----- 208
+ D N+ + +++ ++K I LW LW RNS S+Q
Sbjct: 1261 V---LTNESAEDFCFNLCVLATQKGCLDKIFICLWMLWFNRNSCLHEGKCILSSQLVHKV 1320
Query: 209 ----SKNSPDFRQTY---------------------------ASWNKKMEIGGLGWAIRD 268
+ + Y A++N+ I LG +RD
Sbjct: 1321 VLMVKEFEEGMKSLYGDQPVIQGHHITKWTPPRSGLLKLNCDAAFNQSTGITTLGMVLRD 1380
Query: 269 SEGSLMGASCKRLDKKWPIKYMEVRAILEGLDDYLNMEVRERMRFKIVVESDSNEAIDTL 326
GS++ R+ + + + E AIL GL+ E ++VESDS +AI+ +
Sbjct: 1381 EAGSVILGGVSRVSEADNVMHAECLAILFGLE-----VAWEHGHISLLVESDSKQAIEEI 1440
BLAST of Spg010865 vs. ExPASy TrEMBL
Match:
A0A2N9IMU2 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53311 PE=4 SV=1)
HSP 1 Score: 81.3 bits (199), Expect = 9.2e-12
Identity = 79/326 (24.23%), Postives = 130/326 (39.88%), Query Frame = 0
Query: 39 QGEWKEEFVREAFLLADSKDVLNMPRRGTNMEDTIIWNQDPKGAFTVKSAYHLAKSLNSK 98
Q EWK + ++ FL ++ +L +P DT+IW G ++V+SAYH ++
Sbjct: 1063 QHEWKTQLIQHMFLPHEASSILGIPLSSHGSLDTLIWPHTSNGRYSVRSAYHFLMERATR 1122
Query: 99 DRASQSDMSKN----------KAVSQ----------------REDTVHLFW--EFAKRIW 158
DR S S+M + K + Q EDT+H+ W + +IW
Sbjct: 1123 DRPSHSNMEEESSLWKNIWSLKVIPQIKHLVPSPLCEECQRGAEDTLHVLWYCKSTNKIW 1182
Query: 159 NEFFPNSALFLNNCRNGRQPVDIWDNMRRILSKEDIEKAIIVLWTLWNARNSSNQSKNSP 218
++ L + R+ + + N + ++ DI+ W LWN N + SP
Sbjct: 1183 RDYSFWPLLQASPPRSLAGLISVVMNSK---NEADIQYFAATSWLLWNRCNKGRTEQWSP 1242
Query: 219 DFRQTYASWN------KKMEIGGLGWAIRDSEGSLMGASCKRLDKKWPIKYMEVRAILEG 278
R + N + G+G +RDS G+ A K L +E A E
Sbjct: 1243 P-RDNHRKINFDGAIFTDLNAAGIGVVVRDSAGNPEAALSKWLVCPPSPAIIEALAAFEV 1302
Query: 279 LDDYLNMEVRERMRFKIVVESDSNEAIDTLNREVEDLTEMAGVVNELR-EKGDNDFVVFV 329
+ N+ + E + E D+ I L +LT ++++ + E G + F
Sbjct: 1303 VKLAKNLGLTE-----VEFEGDAFVIIAALEDPSANLTPYDNIISDTQAEVGSLQWFSFS 1362
BLAST of Spg010865 vs. ExPASy TrEMBL
Match:
A0A803PI64 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 77.0 bits (188), Expect = 1.7e-10
Identity = 75/327 (22.94%), Postives = 128/327 (39.14%), Query Frame = 0
Query: 32 VIDLLNAQGEWKEEFVREAFLLADSKDVLNMPRRGTNMEDTIIWNQDPKGAFTVKSAYHL 91
V DL A G+W E F+R F D++ +L +P + ED I+ + G +TVKS Y +
Sbjct: 1151 VTDLKRADGQWDESFIRSVFNTIDAELILAIPFSDCDFEDKILLHYSKNGEYTVKSGYRM 1210
Query: 92 AKSLNSKDRASQSDMSKNKAVSQREDTVHLFWEFAKRIWNEFFPNSALFLNNCRNGRQPV 151
A SL ++ S H ++ K++W P A G V
Sbjct: 1211 ASSLITEHHQSSD---------------HSLVQWWKKLWRLKIPPKA------SKGYWVV 1270
Query: 152 D-IWDNMRRIL---------------SKEDIEKAIIVLWTLWNARNSSNQSKNSP----- 211
++D +++L KE +E ++V W +WN RNS P
Sbjct: 1271 SGVYDEFKKMLGTDNLSLLMRMAAEWEKEKLEFFLLVSWNVWNVRNSVVHGSYHPKPEDM 1330
Query: 212 ---------DFRQTYASWNKKMEI---------------------------GGLGWAIRD 271
+FR S + + GLG +RD
Sbjct: 1331 IEWCGRYLDEFRGEAGSRSNSAMVEERRWVPSVVDQVTINVDAGVKPGGLHSGLGNVMRD 1390
Query: 272 SEGSLMGASCKRLDKKWPIKYMEVRAILEGLDDYLNMEVRERMRFKIVVESDSNEAIDTL 302
S G+++ A+ L ++ P + + AI +GL L +R RF VE+D +A+ +
Sbjct: 1391 SAGAVLCAAATVLQQELPPLQLVLMAIKKGLQAGLQRRLR---RFN--VETDCLQAVQLI 1450
BLAST of Spg010865 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 51.2 bits (121), Expect = 2.0e-06
Identity = 40/153 (26.14%), Postives = 68/153 (44.44%), Query Frame = 0
Query: 195 TYASWNKKMEIGGLGWAIRDSEGSLMGASCKRLDKKWPIKYMEVRAILEGLDDYLNMEVR 254
T A+WN+ E G+GW +R+ +G + + L K ++++LE + + V
Sbjct: 432 TDATWNRDNERCGIGWVLRNEKGEVKWMGARALPK--------LKSVLEAELEAMRWAVL 491
Query: 255 ERMRFK---IVVESDSNEAIDTLNRE---------VEDLTEMAGVVNELREKGDNDFVVF 314
RF+ ++ ESDS I+ LN + ++DL + E++ F
Sbjct: 492 SLSRFQYNYVIFESDSQVLIEILNNDEIWPSLKPTIQDLQRLLSQFTEVK---------F 551
Query: 315 VKCPRLCNTLAHDLARAVTSHGDFVWNCYCSLP 336
V PR NTLA +AR S ++ Y +P
Sbjct: 552 VFIPREGNTLAERVARESLSFLNYDPKLYSIVP 567
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_015387358.1 | 4.1e-14 | 22.07 | uncharacterized protein LOC107177672 [Citrus sinensis] | [more] |
EEC84982.1 | 1.6e-13 | 25.51 | hypothetical protein OsI_32248 [Oryza sativa Indica Group] >EEE62926.1 hypotheti... | [more] |
XP_024042628.1 | 1.3e-12 | 22.53 | uncharacterized protein LOC112099434 [Citrus clementina] | [more] |
XP_042987456.1 | 6.5e-12 | 25.62 | uncharacterized protein LOC122315549 [Carya illinoinensis] | [more] |
XP_024034843.1 | 8.5e-12 | 22.59 | uncharacterized protein LOC112096145 [Citrus clementina] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A803PM68 | 3.2e-12 | 22.34 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803P3X4 | 4.1e-12 | 22.42 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A1R3GTB5 | 9.2e-12 | 23.58 | Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23588 PE=4 SV... | [more] |
A0A2N9IMU2 | 9.2e-12 | 24.23 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A803PI64 | 1.7e-10 | 22.94 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G29090.1 | 2.0e-06 | 26.14 | Ribonuclease H-like superfamily protein | [more] |