Spg010837 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg010837
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribonuclease H
Location	scaffold10: 6555371 .. 6559633 (-)
RNA-Seq Expression	Spg010837
Synteny	Spg010837

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCTTTGGCTCGTTGTGTAATTGGAGTCACAACAGGTGTAGTGATCGGCGTTGAAGGATTTGAAATAGGAGGAGTGAGAGGTCCAGATGAAGAAGATGAAGAGGAAGTTTCTGACGCCATTGTTAATCACAGAGCTCTGATACCATCATAAACACAGAAAACAGAGAGGGAAGGAAGTATTTCTAATAGATGAGGTAAAAACTGAATATTCTGTATATACACAAACCGCAATAACACCAAATAAATAGGGAGGCAGGCGATACACGTACAGCCCTAATAGGGCAAATCATAACCGAAAAATATAGCTAAATAAATGGAAAAATAGACCAGGAAAACTCAGGAAATATAGCCTTCTATTAGTCCAAACCAGGCTATTATCACAATCAACTGTGAAAAGATGATGACAATTGGTAACTAATATGGGTTTTTGTTGATTATAGAGATAAATGTGTATTGGTGCAACTAAATTTATGCATAAATTCCACTTAGCGAGTTAATGAATCAGAACACAACAAAATTGTATTCTAAACCATTTAATTGTTTCTTAAATGTTGTCAAGGTGTGGAAATTTGGTAACTGATGTTGGATATTATTAAAAATAAAATGTGACAGAAAGTGATGTTTATATTTAATTCATCAAAAGTTTCAAATCAAATTCAATTTGATGTTTCAATTACATATGGAAGTTAAATTTGGTGTTATAACTCAATTGAGTTATATTTTTCATATGTTTCAATTTTATTTATTTTTGTTCTATGGAGTTACTAAGTCGCTAGCCTAAAAATAGCAACTTGTTTCTTCATTTGAATCATCTCATTACATTTGAAGCATTCTTCTTTCTTTTTTTGTTTCTTTTGATCTTGTGTCGAGTTGAGAGCAAGTATTCCAAGATCAGTTCTATCAGATCCGAGTAGTTCGAGGTTGCTGTTCTATCGGAATTAGTCGTTGTATGAGTATCCTGCTGAGAAAATCATTGTAGTCTGCTAGCAGCTCGTGCAGAGCGAATAATTGTCTTCAGGACAGCGCTTTGGAAGCGTGCCTCGACTACCAATCATCACATTCTTCTGTTTTACAGGTTCTATTCACTTGATGTGGCTATTGTTGTCAATCGGATCATCTACAAACATCGGAGCGCTTATGATCTTTTGATATGGTTTAATTATGATTTCTGTAAATTTTGTTATGTACAATGTTTGTAGATATATTTACTATGCAGTTGTTTATAGCCAGTTGCATTGTAATCTGTTTGCTAGTGTGCAACAGTTTTTATATGCAATGTATTTCCAACAACTGATACAGTGATTTTTTTTTTTTTTTTGGTTTATGAGTGTATACATATGTCTAAGAAGCCAAAGCAGATGAATGAATTCATGCCTATTAACTTATGTAACATGGTCTATAAGATAGTGGTCAAGACTCTAGCAAACAGGCTGAAGAAAGTCTTGGACTCCATCATTTTCCCTTCGCAGTCTGTCTTCGTCTCGGGGAGACAAATCACTGATAACGTGGTAGTGGGTTATGAATGTATCATTCTTCAAAGAATAGAAGGAAAGGTAAAGAAGCTTTCGCAACTCTTAAGCTAGACATGAGCAAAGTTTATGATAGGGTTGGTGGGAGTTCCAAGAGGAAGTTATGAAGCAAATGAATCAAAGCACAACAAAATTGTATCCTAAACCATTTAATTGTTTCTTAAATGTTGTCGAAGTGTGGAAATTTGGCAACACACATGTTTTTTTTTTTTTTTTGGATTTATGAGTGTATACATATGATATATTAAAGATGTTATATTATTGACCACTTCTTGGTTCCAACTCAATACATTGACCTATTTATGTCCAAGTCAAACCAATAAATATATATTTTTTCAATTTTTTATCCTTTATATTTAGTATTGTTATAGCTAATTTTGGACCACCATATGCAAGGAGCTGACGAGGACAATCGGGCGGAGATAGGACCAGGAAGTGACCCAGAGGAAGACCAGCCAACGGGCCGAGCCAAAATGACCCGACCCAAGGCCGAGGCCGACCACTCGGCCCGCTTGCGTGGGCCGAGTTCGTTTGCATTCGCTCGGTCCCTGCTACCTCTAGCTGCCCCGGTCCAGCTTGGTTCGTCCCAAAACGCCTCCGAATCCCTAAAAAGCCTAGGAGCATGAGCAGGTATTTATACCCCTCTTCGCCACTGAAGAAGGGACCCGAACTCTTGACTCTCTCCTCTTACTCTCTTGCTCTTACCTCCTTGCTTCCCATCGTTCTGTTTGCTAACTTAAGCATCGGAGCCGGTGTGGCAAGCACCACACCGGTGTGCAGGTTACAGTTTTGCAGGCCACGTCTTCCCCCGCTTTCAAACAAATTCACTGTCGATTATCACGTGGAGCGAAGGTAATTTACCTAGCGAAATTTGATCATCAACAGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATCGGTCACTCCATGAGTAAGGGGATGGAGAAGAGAAATCTAGACATAAACACAGAGAATTCGGATGGTGACCGCCACCAGCGGAGGTCACAGGAAGAAGGCCAAGATCGGCCTCAGACTGAATCTCCTCGTCCTCGATCTCCACTACCCTCTTCCCGAGAGAAGCAAGCTGATCTCAAAACTGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCAAAATTTGTCCAGGATACTTCGCATCCTGGATAAACCTGGTCCTAGCACTAAAACCTATGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTGCAGAATTAGAGACGAGATCGAAGGGAAAGAAGACTGACAACATGACCAGCAAGATCAGGGGGCTCAAACCTACTGATCGTACACTTAAAGGACGTGACTACACAATTTCTACCCCAAGCTACGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGTGCAGATGTGCCAAAACTGCCGAGTCCGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTACCGAGGCCGAGGCCAGAGCAGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAAGACAATCCCCCTTGGAAGACCGAGCTTCTAAACACACTAAAGGAGCTTAGAAATCCACAGGGATACCTGCAGAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGACCAAGTTGACCCGCCATTCACAGAAGAAGTCATGAAAGCCGAGGTGCCTCGGAAGTTCAAGGTACCTACATTCACACCGTATGATGGCAAGAAAGACCCTGTGCAACATCTAAATGCCTACAAAAGCTGGATGGACTTCCACGGCGTCTCAGACGCAATCAGGTGTCGTGCCTTCTTTTTCACTCTGACAGGATCAGCAAAGCATTGGTTTGAAAGGTTGAAGAGAAGATCCATCAGCTCTTTCAAGGAATTAGCTCGAGCATTCCTTGCACAGTTCATGGGAGCCAGAGAACAGCGCAAGCCTCACATCAACCTCTTAATAGTCAAACAACAGCCAGGTGAGAGCTTGCGTGATTATATAACACATTTTAATGACGAAGCACTACAGGTCGAGGGGTACAGCGAGGGAGCAGCCCTAGTAGCCATAACAGTCGGATTGGAAGACGAAAGACTGCTCAATTCAATAGGTAAGAGCCAACCTCGAACCTATGCAGAGTTTGTCTCCCGGGCATAGAAATACATGAGCGTAGAGGAGTTGCTCAAGTCAAAGAAGTCAGAACGTGAACACAAGAGGTTTTCTTCATCTGACCACGACAGTAGGAAGGACAAAAAGCAGCGGACCGACGACCATGGCCGAGGCCGACCAGACCGAGGCGACTACTTGAAGAAATTTGAGAAGTACACCCCCACTTCAATCCCACAGGAGCAGATCTTGATGGAAATACGGAATACAAACCTACTCAACGTGCCTAGAAAGCTGAAGTCAAACCCTGATAACAGAGACAAAAGCCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACTAGGAACTGCATTAAGCTAAAGGACGAGATTGAAATACTGATTCGGAACGGATACCTGAAGGAGTTCACCACTAAGGCCGAGGCCGACCAGAGACGACCTAGGCAAAGACAAGGGTGGACCTCAACTGGAAATCCGTTGAGGACCAAGACAGACTCTCCTATGGTCGAGGCCGAGGCTGGGGCCGAGCCCTATCACACTTCATGCCAGGGTCAAGGACAGCATTCTGGAGAACACACTAAACCTTAA

mRNA sequence

ATGGGGGCTTTGGCTCGTTGTGTAATTGGAGTCACAACAGGTGTAGTGATCGGCGTTGAAGGATTTGAAATAGGAGGAGTGAGAGGTCCAGATGAAGAAGATGAAGAGGAATCTGCTAGCAGCTCGTGCAGAGCGAATAATTGTCTTCAGGACAGCGCTTTGGAAGCGTGCCTCGACTACCAATCATCACATTCTTCTGTTTTACAGCTAATTTTGGACCACCATATGCAAGGAGCTGACGAGGACAATCGGGCGGAGATAGGACCAGGAAGTGACCCAGAGGAAGACCAGCCAACGGGCCGAGCCAAAATGACCCGACCCAAGGCCGAGGCCGACCACTCGGCCCGCTTGCGTGGGCCGAGTTCGTTTGCATTCGCTCGGTCCCTGCTACCTCTAGCTGCCCCGGTCCAGCTTGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATCGGTCACTCCATGAGTAAGGGGATGGAGAAGAGAAATCTAGACATAAACACAGAGAATTCGGATGGTGACCGCCACCAGCGGAGGTCACAGGAAGAAGGCCAAGATCGGCCTCAGACTGAATCTCCTCGTCCTCGATCTCCACTACCCTCTTCCCGAGAGAAGCAAGCTGATCTCAAAACTGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCAAAATTTGTCCAGGATACTTCGCATCCTGGATAAACCTGGTCCTAGCACTAAAACCTATGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTGCAGAATTAGAGACGAGATCGAAGGGAAAGAAGACTGACAACATGACCAGCAAGATCAGGGGGCTCAAACCTACTGATCGTACACTTAAAGGACGTGACTACACAATTTCTACCCCAAGCTACGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGTGCAGATGTGCCAAAACTGCCGAGTCCGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTACCGAGGCCGAGGCCAGAGCAGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAAGACAATCCCCCTTGGAAGACCGAGCTTCTAAACACACTAAAGGAGCTTAGAAATCCACAGGGATACCTGCAGAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGACCAAGTTGACCCGCCATTCACAGAAGAAAAATACATGAGCGTAGAGGAGTTGCTCAAGTCAAAGAAGTCAGAACGTGAACACAAGAGGTTTTCTTCATCTGACCACGACAGTAGGAAGGACAAAAAGCAGCGGACCGACGACCATGGCCGAGGCCGACCAGACCGAGGCGACTACTTGAAGAAATTTGAGAAGTACACCCCCACTTCAATCCCACAGGAGCAGATCTTGATGGAAATACGGAATACAAACCTACTCAACGTGCCTAGAAAGCTGAAGTCAAACCCTGATAACAGAGACAAAAGCCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACTAGGAACTGCATTAAGCTAAAGGACGAGATTGAAATACTGATTCGGAACGGATACCTGAAGGAGTTCACCACTAAGGCCGAGGCCGACCAGAGACGACCTAGGCAAAGACAAGGGTGGACCTCAACTGGAAATCCGTTGAGGACCAAGACAGACTCTCCTATGGTCGAGGCCGAGGCTGGGGCCGAGCCCTATCACACTTCATGCCAGGGTCAAGGACAGCATTCTGGAGAACACACTAAACCTTAA

Coding sequence (CDS)

ATGGGGGCTTTGGCTCGTTGTGTAATTGGAGTCACAACAGGTGTAGTGATCGGCGTTGAAGGATTTGAAATAGGAGGAGTGAGAGGTCCAGATGAAGAAGATGAAGAGGAATCTGCTAGCAGCTCGTGCAGAGCGAATAATTGTCTTCAGGACAGCGCTTTGGAAGCGTGCCTCGACTACCAATCATCACATTCTTCTGTTTTACAGCTAATTTTGGACCACCATATGCAAGGAGCTGACGAGGACAATCGGGCGGAGATAGGACCAGGAAGTGACCCAGAGGAAGACCAGCCAACGGGCCGAGCCAAAATGACCCGACCCAAGGCCGAGGCCGACCACTCGGCCCGCTTGCGTGGGCCGAGTTCGTTTGCATTCGCTCGGTCCCTGCTACCTCTAGCTGCCCCGGTCCAGCTTGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATCGGTCACTCCATGAGTAAGGGGATGGAGAAGAGAAATCTAGACATAAACACAGAGAATTCGGATGGTGACCGCCACCAGCGGAGGTCACAGGAAGAAGGCCAAGATCGGCCTCAGACTGAATCTCCTCGTCCTCGATCTCCACTACCCTCTTCCCGAGAGAAGCAAGCTGATCTCAAAACTGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCAAAATTTGTCCAGGATACTTCGCATCCTGGATAAACCTGGTCCTAGCACTAAAACCTATGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTGCAGAATTAGAGACGAGATCGAAGGGAAAGAAGACTGACAACATGACCAGCAAGATCAGGGGGCTCAAACCTACTGATCGTACACTTAAAGGACGTGACTACACAATTTCTACCCCAAGCTACGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGTGCAGATGTGCCAAAACTGCCGAGTCCGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTACCGAGGCCGAGGCCAGAGCAGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAAGACAATCCCCCTTGGAAGACCGAGCTTCTAAACACACTAAAGGAGCTTAGAAATCCACAGGGATACCTGCAGAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGACCAAGTTGACCCGCCATTCACAGAAGAAAAATACATGAGCGTAGAGGAGTTGCTCAAGTCAAAGAAGTCAGAACGTGAACACAAGAGGTTTTCTTCATCTGACCACGACAGTAGGAAGGACAAAAAGCAGCGGACCGACGACCATGGCCGAGGCCGACCAGACCGAGGCGACTACTTGAAGAAATTTGAGAAGTACACCCCCACTTCAATCCCACAGGAGCAGATCTTGATGGAAATACGGAATACAAACCTACTCAACGTGCCTAGAAAGCTGAAGTCAAACCCTGATAACAGAGACAAAAGCCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACTAGGAACTGCATTAAGCTAAAGGACGAGATTGAAATACTGATTCGGAACGGATACCTGAAGGAGTTCACCACTAAGGCCGAGGCCGACCAGAGACGACCTAGGCAAAGACAAGGGTGGACCTCAACTGGAAATCCGTTGAGGACCAAGACAGACTCTCCTATGGTCGAGGCCGAGGCTGGGGCCGAGCCCTATCACACTTCATGCCAGGGTCAAGGACAGCATTCTGGAGAACACACTAAACCTTAA

Protein sequence

MGALARCVIGVTTGVVIGVEGFEIGGVRGPDEEDEEESASSSCRANNCLQDSALEACLDYQSSHSSVLQLILDHHMQGADEDNRAEIGPGSDPEEDQPTGRAKMTRPKAEADHSARLRGPSSFAFARSLLPLAAPVQLVGAVCGEESLPNLHIGHSMSKGMEKRNLDINTENSDGDRHQRRSQEEGQDRPQTESPRPRSPLPSSREKQADLKTAALENKVSAMDQNLSRILRILDKPGPSTKTYDERLVRDPRKGKEPMEHTAELETRSKGKKTDNMTSKIRGLKPTDRTLKGRDYTISTPSYGHTKTDLRNLIEEKCRCAKTAESEARAAEAEARATEAEARAAEARLAEAEAKKDNPPWKTELLNTLKELRNPQGYLQKLKDSGAQDLEELIDQVDPPFTEEKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEAGAEPYHTSCQGQGQHSGEHTKP

Homology

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BLAST of Spg010837 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 109.4 bits (272), Expect = 1.1e-19
Identity = 69/166 (41.57%), Postives = 100/166 (60.24%), Query Frame = 0


Query: 404 EKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPT 463
           ++YMS  E   SK+ E + KR +    +   DK Q +    R R  + D  +KFEKYTPT
Sbjct: 345 QRYMSAGEFFYSKR-EPDGKR-TDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPT 404

Query: 464 SIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIKLKDEIEILI 523
           ++P EQ+LMEI++  LL  P ++K++   R K +YCLFHRDHGH+T++C  LK+E+E LI
Sbjct: 405 TVPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLI 464

Query: 524 RNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEAG 570
           R GYLKE+  + +A Q     +    S    +RT    P +E E+G
Sbjct: 465 RRGYLKEYVEEPKATQNGESDK----SPAREIRTIMGGP-IERESG 503

[Close]

BLAST of Spg010837 vs. NCBI nr
Match: XP_022159192.1 (uncharacterized protein LOC111025612 [Momordica charantia])

HSP 1 Score: 109.4 bits (272), Expect = 1.1e-19
Identity = 62/152 (40.79%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 404 EKYMSVEEL------LKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKF 463
           +KYMS EE       L+ K+++++ +R       S+ +K+ R          + D  +KF
Sbjct: 29  QKYMSAEEFFHLKKELEGKRADQKRERSGEKPLSSKWEKQDRV-------VGQKDLPRKF 88

Query: 464 EKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIKLKD 523
           EKYTPT++P EQ+LMEI++  LL  P  +K+ P+ R K +YCLFHRDHGH+T +C  LK+
Sbjct: 89  EKYTPTTVPLEQVLMEIKDQRLLKWPETMKAPPNKRSKGRYCLFHRDHGHATLDCFDLKE 148

Query: 524 EIEILIRNGYLKEFTTKAEADQRRPRQRQGWT 550
           E+E LIR GYLKE+    +A   R    +  T
Sbjct: 149 EVEGLIRKGYLKEYVDDLKATPNRENDNKSPT 173

[Close]

BLAST of Spg010837 vs. NCBI nr
Match: XP_022142767.1 (uncharacterized protein LOC111012805 [Momordica charantia])

HSP 1 Score: 99.8 bits (247), Expect = 8.6e-17
Identity = 66/166 (39.76%), Postives = 95/166 (57.23%), Query Frame = 0


Query: 404 EKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPT 463
           ++YMS  E   SK+ E   KR +    +   DK Q +    R R  + D  +KFEKYT T
Sbjct: 170 QRYMSAGEFFYSKR-ESNGKR-TDQKRERSGDKPQGSRWEKRDRSCQKDPPQKFEKYTST 229

Query: 464 SIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIKLKDEIEILI 523
           ++P EQ+LMEI+N  LL  P ++ ++   R K +YCLFH DHGH+T++C  LK+E+E LI
Sbjct: 230 TVPLEQVLMEIKNQRLLKWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLKEEVEGLI 289

Query: 524 RNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEAG 570
             GYLKE+  + +A Q     +    S    +RT    P +E E+G
Sbjct: 290 LRGYLKEYVEEPKATQNGESDK----SPAREIRTIMGGP-IERESG 328

[Close]

BLAST of Spg010837 vs. NCBI nr
Match: XP_022159368.1 (uncharacterized protein LOC111025785 [Momordica charantia])

HSP 1 Score: 99.4 bits (246), Expect = 1.1e-16
Identity = 64/165 (38.79%), Postives = 94/165 (56.97%), Query Frame = 0


Query: 404 EKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPT 463
           ++YMS  E   SK+ E + KR +    +   DK Q +    R R  + D  +KFEKYTPT
Sbjct: 129 QRYMSAGEFFYSKR-EPDGKR-TDQKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPT 188

Query: 464 SIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIKLKDEIEILI 523
           ++P EQ+LMEI++  LL  P ++K     R K +YCLFHRDH H+T++   LK+E+E LI
Sbjct: 189 TVPLEQVLMEIKDQRLLKWPERMKVPSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLI 248

Query: 524 RNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEA 569
           R GYL+E+  + +A Q    ++    S    +RT    P+    A
Sbjct: 249 RRGYLQEYVEEPKATQNGESEK----SPAREIRTIMGGPIERESA 287

[Close]

BLAST of Spg010837 vs. NCBI nr
Match: MQL69050.1 (hypothetical protein [Colocasia esculenta])

HSP 1 Score: 98.2 bits (243), Expect = 2.5e-16
Identity = 71/202 (35.15%), Postives = 115/202 (56.93%), Query Frame = 0


Query: 377 GYLQKLKDSGAQDLEELIDQVDPPFTEEKYMSVEELLKSKKSER--EHKRFSSSDHDSRK 436
           G+LQ  +  G Q L  L + +      +++ + EE L + ++E+  +  +   SD+DS +
Sbjct: 662 GFLQ--RTLGVQQLATLAELLS---IAQRHAACEESLAAGRAEQGEQSDKKRPSDNDSDR 721

Query: 437 DKKQRTDDHGRGRPDRGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRD 496
           D+K+     GR   D     + F  YTP ++  +QIL EIRN   +  P++++S+P  RD
Sbjct: 722 DRKK-----GRRNGDSPRRPRPFTNYTPLTVAPKQILTEIRNEAYVRWPQRMRSDPRRRD 781

Query: 497 KSQYCLFHRDHGHSTRNCIKLKDEIEILIRNGYLKEFTTKAEADQRRPRQRQGWTSTGNP 556
           +++YC FHRDHGH T  C +LKDEIE LI+ GYL +F  +   ++ RPR+R+ WT   +P
Sbjct: 782 QNKYCRFHRDHGHDTSECCQLKDEIEDLIKRGYLGQFVRR---NEDRPRRRE-WTPE-HP 841

Query: 557 LRTKTDSPMVEAEAGAEPYHTS 577
           +  + +      E  + PY TS
Sbjct: 842 INNEPNG----QEINSTPYPTS 844

[Close]

BLAST of Spg010837 vs. ExPASy TrEMBL
Match: A0A6J1DZ52 (uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025612 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.2e-20
Identity = 62/152 (40.79%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 404 EKYMSVEEL------LKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKF 463
           +KYMS EE       L+ K+++++ +R       S+ +K+ R          + D  +KF
Sbjct: 29  QKYMSAEEFFHLKKELEGKRADQKRERSGEKPLSSKWEKQDRV-------VGQKDLPRKF 88

Query: 464 EKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIKLKD 523
           EKYTPT++P EQ+LMEI++  LL  P  +K+ P+ R K +YCLFHRDHGH+T +C  LK+
Sbjct: 89  EKYTPTTVPLEQVLMEIKDQRLLKWPETMKAPPNKRSKGRYCLFHRDHGHATLDCFDLKE 148

Query: 524 EIEILIRNGYLKEFTTKAEADQRRPRQRQGWT 550
           E+E LIR GYLKE+    +A   R    +  T
Sbjct: 149 EVEGLIRKGYLKEYVDDLKATPNRENDNKSPT 173

[Close]

BLAST of Spg010837 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.2e-20
Identity = 69/166 (41.57%), Postives = 100/166 (60.24%), Query Frame = 0


Query: 404 EKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPT 463
           ++YMS  E   SK+ E + KR +    +   DK Q +    R R  + D  +KFEKYTPT
Sbjct: 345 QRYMSAGEFFYSKR-EPDGKR-TDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPT 404

Query: 464 SIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIKLKDEIEILI 523
           ++P EQ+LMEI++  LL  P ++K++   R K +YCLFHRDHGH+T++C  LK+E+E LI
Sbjct: 405 TVPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLI 464

Query: 524 RNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEAG 570
           R GYLKE+  + +A Q     +    S    +RT    P +E E+G
Sbjct: 465 RRGYLKEYVEEPKATQNGESDK----SPAREIRTIMGGP-IERESG 503

[Close]

BLAST of Spg010837 vs. ExPASy TrEMBL
Match: A0A6J1CNT2 (uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012805 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.2e-17
Identity = 66/166 (39.76%), Postives = 95/166 (57.23%), Query Frame = 0


Query: 404 EKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPT 463
           ++YMS  E   SK+ E   KR +    +   DK Q +    R R  + D  +KFEKYT T
Sbjct: 170 QRYMSAGEFFYSKR-ESNGKR-TDQKRERSGDKPQGSRWEKRDRSCQKDPPQKFEKYTST 229

Query: 464 SIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIKLKDEIEILI 523
           ++P EQ+LMEI+N  LL  P ++ ++   R K +YCLFH DHGH+T++C  LK+E+E LI
Sbjct: 230 TVPLEQVLMEIKNQRLLKWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLKEEVEGLI 289

Query: 524 RNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEAG 570
             GYLKE+  + +A Q     +    S    +RT    P +E E+G
Sbjct: 290 LRGYLKEYVEEPKATQNGESDK----SPAREIRTIMGGP-IERESG 328

[Close]

BLAST of Spg010837 vs. ExPASy TrEMBL
Match: A0A6J1DYL6 (uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025785 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 5.4e-17
Identity = 64/165 (38.79%), Postives = 94/165 (56.97%), Query Frame = 0


Query: 404 EKYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDDHGRGRPDRGDYLKKFEKYTPT 463
           ++YMS  E   SK+ E + KR +    +   DK Q +    R R  + D  +KFEKYTPT
Sbjct: 129 QRYMSAGEFFYSKR-EPDGKR-TDQKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPT 188

Query: 464 SIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIKLKDEIEILI 523
           ++P EQ+LMEI++  LL  P ++K     R K +YCLFHRDH H+T++   LK+E+E LI
Sbjct: 189 TVPLEQVLMEIKDQRLLKWPERMKVPSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLI 248

Query: 524 RNGYLKEFTTKAEADQRRPRQRQGWTSTGNPLRTKTDSPMVEAEA 569
           R GYL+E+  + +A Q    ++    S    +RT    P+    A
Sbjct: 249 RRGYLQEYVEEPKATQNGESEK----SPAREIRTIMGGPIERESA 287

[Close]

BLAST of Spg010837 vs. ExPASy TrEMBL
Match: A0A7N2N9G0 (Reverse transcriptase OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-15
Identity = 54/137 (39.42%), Postives = 79/137 (57.66%), Query Frame = 0


Query: 405 KYMSVEELLKSKKSEREHKRFSSSDHDSRKDKKQRTDD---HGRGRPDRGDYLKKFEKYT 464
           KYM+ E+ L +++ +   +     +   +  KK RT D     R RP  G    +F  +T
Sbjct: 663 KYMNAEDALLAREEKPRKRERQEDNRQDQGRKKTRTGDRREERRPRPMGG----RFTSFT 722

Query: 465 PTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIKLKDEIEI 524
           P + P +Q+LM+I++   L  P KLKS+P+ R + +YC FHRDHGH T +C  LK +IE 
Sbjct: 723 PLTAPVDQVLMQIKDEEALTFPGKLKSDPNKRSRDKYCRFHRDHGHDTADCYDLKQQIEA 782

Query: 525 LIRNGYLKEFTTKAEAD 539
           LIR G L+ F +K  AD
Sbjct: 783 LIRQGKLQRFVSKERAD 795

The following BLAST results are available for this feature:

BLAST of Spg010837 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158830.1	1.1e-19	41.57	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022159192.1	1.1e-19	40.79	uncharacterized protein LOC111025612 [Momordica charantia]	[more]
XP_022142767.1	8.6e-17	39.76	uncharacterized protein LOC111012805 [Momordica charantia]	[more]
XP_022159368.1	1.1e-16	38.79	uncharacterized protein LOC111025785 [Momordica charantia]	[more]
MQL69050.1	2.5e-16	35.15	hypothetical protein [Colocasia esculenta]	[more]

BLAST of Spg010837 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg010837 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZ52	5.2e-20	40.79	uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DWY0	5.2e-20	41.57	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CNT2	4.2e-17	39.76	uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1DYL6	5.4e-17	38.79	uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A7N2N9G0	1.3e-15	39.42	Reverse transcriptase OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of Spg010837 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 321..357
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 575..590
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 414..456
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 534..590
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 544..558
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..280

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg010837.1	Spg010837.1	mRNA