Spg010788 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg010788
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Retrotransposon gag protein
Location	scaffold10: 5997400 .. 5999951 (+)
RNA-Seq Expression	Spg010788
Synteny	Spg010788

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTATGGCCACGACAGAAGAAGAAAATCAATGTGTGGTGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGACTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACAAACGATCAACCTCGAAGAAAGATAGATAACTTAGATGTGAAATTGTTCAATGAAGTATGCAGTGACAAGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGAAGAAGTTCTCCGTTCTCATAACTACAGAAGTTTCTTTGAAGGTGAAACCAAATCTCATTATCTTGATCAATCCTACAAGTCAAGGATCTGATCAAGACCATGATGTAGATAAGGGCTTTTAAAATGTAAAAACTCCTTATCGTAAGAGTCTAAACTGCATGATGATTCTAGCCCACATGAGCTTAAAAGGTGAGTGCAAAAAAAATTGAACTACGTTATGATTTGATCCCTTTTCTTCAAAAGGTACGTAGGCAGCTGAAAGAGAACTTTAAGTTCAGTCTCTGCAAAAAAAAAAAATGAAAGTGCAACAAATATTGAAGCACGACAAAACAAATTGAAGAAACTCATCACTACTGGGGGCAACACAACAAATTGAAGTTGTGCACCGTAATGAATGTGAAGCTACGAGTTGGATGAATAAAAAAAAACTTCATTCCTCCAAATTCAATGTCTCGCTAGCCTCAAGTTCGGTGTTCCATTCACCCTAAGTTTGTTGCTCCCTCTTCTCTCCAAGTTCGAGGGTTCTTATGATGTACGCTACTGCGTTGTTCCCTCTTCTTCAAGTTCTCGAAGGTTCTCACACGCTTCATTGGAGTTCCTTCTTAAAGTTCGAAGGTTCTCACGTTGCGCTGTAACGCTGTTCCTTCTCCAATTTCGAAGGTTCTGACGCTGCGCTGCTTCCTTCACCAAGTTCGAAGGTTCTCACGCTTCGCTGCTTCGCCGTTCCTTTTCCATGTTCGAAGGTTCTCACGCTGTGTTGCTTCCTTCTCCAAGTTCGAAGGTTCTCATGCTACACTAGGCTGCGCTGTTGCGCTACTTCCTTCTTTAAGTTCGAAGGTTCCCACATTGCGCTGTTGTGCTGCTTCCTTCTCCAAGCTCGGAGGTTCTGACGTTGCGCTGCTTCCTTCACCAAGTTCGAAGATTCTCACGCAACGCTGTTTCGCTGTACCTTCTCCAAGTTCGAAGGTTCTCATGTTGCTTCACTATTGTTCCTTCTTCAATTTCGAAGGTTCATACGGCGCTGCCTCGTTGTTCCTTCTCCAAGTTCAAAGGTTTTCACGTTGTGTTCCTTCCTTCTCCAAGTTCGAAGGTTTTCATGCTACGCTAGGTTGCGCTATTGCACTACTTCCTTCTTTAAGTTCGAAGGTTCCCACATTGCGCTATTGTGCTGCTTCATTCTCCAAGTTCGAAAGTTCGCATGTTGTGCTGTTGCCCGCTGCTTCCTTCTCCCTCCAAGTTCGAAGGTTCTGACGTTGCGCTGCTTCCTTCACCAAGTTCGAAGGTTCTCACGTTTCGCTGCATCCTTCACCAAGTTCGAAGGTTCGCATGTTGTTCGCTGCTTCGCTGTTGTTCCCTTTTCAAGTTTGAAGATTCACGTGGCGTTGCTTCGTTGTTCATTCTCCAAGTTTGAAGGTTCTGATTCTACGCTGCTTTCTTTTCCACGTTCGAAAGTTCTCGTGCTACGCTGCTTTGCTTTTCCTTCTCCAAGTTCGAAGGTTCTGCTTTGTTGAAAGATGTGGCAGCGGAAAAAGACCAAGGAACATGTGCTTGCACTCATGCTGGAAGGCGTGACGGCGACAAAAGTCCAAGGAACATGTCCTTGAACTCATGCTGGAAGGCATGGTGGCGGCAAAAGTCCAAGGAACATGTTCTTGAACTCACGCCGAAAGGCGTGACGGCGGCAAAAGTCCAAGGAACATGTCCAAAGTCCAAGGAACATGTCCTTGCACTCATGTTGGAAGGCGTGGCGGCGACAAAAGTACAAGGAACATGTCCAAAGTCCAAGGAACATGTCCTTGCACTCATGTTGGAAGGCGTGGCGACGACAAAAGTCCAAGGAGCATGTCCAAAGTCCAAGGAACATGTCCTTGCACTCATGCTGAAAGGCGTGGCGGCGACAAAAGTCCAAGGAACATGTCCTTGCACTCATGTTGGAAGGCGTGGCGGCGGCAAAAGTCCAAGGAACATGTCCAAAGTCCAAGGAATATGTCGTTGCACTCATGCCGAAAGGCGTGGCGGCGGCAAAAGTCCAAGGAACATGTCCAAAGTCCAAGGAACACGTCCTTGCACTCATGCTGGAAGGCGTGGCGGCGACAAAAGTACAAGGAACATGTCCTTGCACTCATGCTGGAAGGCTAGGCGACGACAAAAGTCGAAGGAGCATGTCCCAAAGTTCAAGGAACATGTCCCTATACTCATGCTGAAAGACGTGGCAGCGGCAAAAGTCCAAGGAACATGTTCCTGTACTCATGCTGAAAGACGTGGCAACAGCAAAAGTTCGAGGAACATGTCCCTGTACTCATGCTGA

mRNA sequence

ATGAGTATGGCCACGACAGAAGAAGAAAATCAATGTGTGGTGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGACTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACAAACGATCAACCTCGAAGAAAGATAGATAACTTAGATGTGAAATTGTTCAATGAAGTATGCAGTGACAAGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGAAGAAGTTCTCCGTTCTCATAACTACAGAAGTTTCTTTGAAGGTTCTGACGCTGCGCTGCTTCCTTCACCAAGTTCGAAGGTTCTCACGCTTCGCTGCTTCGCCGTTCCTTTTCCATGTTCGAAGGTTCTCACGCTGTGTTGCTTCCTTCTCCAAGTTCGAAGGTTCTCATGCTACACTAGGCTGCGCTGTTGCGCTACTTCCTTCTTTAAGTTCGAAGGTTCCCACATTGCGCTGTTGTGCTGCTTCCTTCTCCAAGCTCGGAGGTTCTGACGTTGCGCTGCTTCCTTCACCAAGTTCGAAGATTCTCACGCAACGCTGTTTCGCTGTACCTTCTCCAAGTTCGAAGGTTCTCATGTTGCTTCACTATTGTTCCTTCTTCAATTTCGAAGGTTCATACGGCGCTGCCTCGTTGTTCCTTCTCCAAGTTCAAAGGTTTTCACGTTGTGTTCCTTCCTTCTCCAAGTTCGAAGGTTTTCATGCTACGCTAGGTTGCGCTATTGCACTACTTCCTTCTTTAAGTTCGAAGGTTCCCACATTGCGCTATTGTGCTGCTTCATTCTCCAAGTTCGAAAGTTCGCATGTTGTGCTGTTGCCCGCTGCTTCCTTCTCCCTCCAAGTTCGAAGTTCTCGTGCTACGCTGCTTTGCTTTTCCTTCTCCAAGTTCGAAGGTTCTGCTTTGTTGAAAGATGTGGCAGCGGAAAAAGACCAAGGAACATGTGCTTGCACTCATGCTGGAAGGCGTGACGGCGACAAAAGTCCAAGGAACATGTCCTTGAACTCATGCTGGAAGGCATGGTGGCGGCAAAAGTCCAAGGAACATGTTCTTGAACTCACGCCGAAAGGCGTGACGGCGGCAAAAGTCCAAGGAACATGTCCAAAGTCCAAGGAACATGTCCTTGCACTCATGTTGGAAGGCGTGGCGGCGACAAAAGTACAAGGAACATGTCCAAAGTCCAAGGAACATGTCCTTGCACTCATGTTGGAAGGCGTGGCGACGACAAAAGTCCAAGGAGCATGTCCAAAGTCCAAGGAACATGTCCTTGCACTCATGCTGAAAGGCGTGGCGGCGACAAAAGTCCAAGGAACATGTCCTTGCACTCATGTTGGAAGGCGTGGCGGCGGCAAAAGTCCAAGGAACATGTCCAAAGTCCAAGGAATATGTCGTTGCACTCATGCCGAAAGGCGTGGCGGCGGCAAAAGTCCAAGGAACATGTCCAAAGTCCAAGGAACACGTCCTTGCACTCATGCTGGAAGGCGTGGCGGCGACAAAAGTACAAGGAACATGTCCTTGCACTCATGCTGGAAGGCTAGGCGACGACAAAAGTCGAAGGAGCATGTCCCAAAGTTCAAGGAACATGTCCCTATACTCATGCTGAAAGACGTGGCAGCGGCAAAAGTCCAAGGAACATGTTCCTGTACTCATGCTGAAAGACGTGGCAACAGCAAAAGTTCGAGGAACATGTCCCTGTACTCATGCTGA

Coding sequence (CDS)

ATGAGTATGGCCACGACAGAAGAAGAAAATCAATGTGTGGTGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGACTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACAAACGATCAACCTCGAAGAAAGATAGATAACTTAGATGTGAAATTGTTCAATGAAGTATGCAGTGACAAGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGAAGAAGTTCTCCGTTCTCATAACTACAGAAGTTTCTTTGAAGGTTCTGACGCTGCGCTGCTTCCTTCACCAAGTTCGAAGGTTCTCACGCTTCGCTGCTTCGCCGTTCCTTTTCCATGTTCGAAGGTTCTCACGCTGTGTTGCTTCCTTCTCCAAGTTCGAAGGTTCTCATGCTACACTAGGCTGCGCTGTTGCGCTACTTCCTTCTTTAAGTTCGAAGGTTCCCACATTGCGCTGTTGTGCTGCTTCCTTCTCCAAGCTCGGAGGTTCTGACGTTGCGCTGCTTCCTTCACCAAGTTCGAAGATTCTCACGCAACGCTGTTTCGCTGTACCTTCTCCAAGTTCGAAGGTTCTCATGTTGCTTCACTATTGTTCCTTCTTCAATTTCGAAGGTTCATACGGCGCTGCCTCGTTGTTCCTTCTCCAAGTTCAAAGGTTTTCACGTTGTGTTCCTTCCTTCTCCAAGTTCGAAGGTTTTCATGCTACGCTAGGTTGCGCTATTGCACTACTTCCTTCTTTAAGTTCGAAGGTTCCCACATTGCGCTATTGTGCTGCTTCATTCTCCAAGTTCGAAAGTTCGCATGTTGTGCTGTTGCCCGCTGCTTCCTTCTCCCTCCAAGTTCGAAGTTCTCGTGCTACGCTGCTTTGCTTTTCCTTCTCCAAGTTCGAAGGTTCTGCTTTGTTGAAAGATGTGGCAGCGGAAAAAGACCAAGGAACATGTGCTTGCACTCATGCTGGAAGGCGTGACGGCGACAAAAGTCCAAGGAACATGTCCTTGAACTCATGCTGGAAGGCATGGTGGCGGCAAAAGTCCAAGGAACATGTTCTTGAACTCACGCCGAAAGGCGTGACGGCGGCAAAAGTCCAAGGAACATGTCCAAAGTCCAAGGAACATGTCCTTGCACTCATGTTGGAAGGCGTGGCGGCGACAAAAGTACAAGGAACATGTCCAAAGTCCAAGGAACATGTCCTTGCACTCATGTTGGAAGGCGTGGCGACGACAAAAGTCCAAGGAGCATGTCCAAAGTCCAAGGAACATGTCCTTGCACTCATGCTGAAAGGCGTGGCGGCGACAAAAGTCCAAGGAACATGTCCTTGCACTCATGTTGGAAGGCGTGGCGGCGGCAAAAGTCCAAGGAACATGTCCAAAGTCCAAGGAATATGTCGTTGCACTCATGCCGAAAGGCGTGGCGGCGGCAAAAGTCCAAGGAACATGTCCAAAGTCCAAGGAACACGTCCTTGCACTCATGCTGGAAGGCGTGGCGGCGACAAAAGTACAAGGAACATGTCCTTGCACTCATGCTGGAAGGCTAGGCGACGACAAAAGTCGAAGGAGCATGTCCCAAAGTTCAAGGAACATGTCCCTATACTCATGCTGAAAGACGTGGCAGCGGCAAAAGTCCAAGGAACATGTTCCTGTACTCATGCTGAAAGACGTGGCAACAGCAAAAGTTCGAGGAACATGTCCCTGTACTCATGCTGA

Protein sequence

MSMATTEEENQCVVSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPRRKIDNLDVKLFNEVCSDKKLQSSIPSRMKKKFSVLITTEVSLKVLTLRCFLHQVRRFSRFAASPFLFHVRRFSRCVASFSKFEGSHATLGCAVALLPSLSSKVPTLRCCAASFSKLGGSDVALLPSPSSKILTQRCFAVPSPSSKVLMLLHYCSFFNFEGSYGAASLFLLQVQRFSRCVPSFSKFEGFHATLGCAIALLPSLSSKVPTLRYCAASFSKFESSHVVLLPAASFSLQVRSSRATLLCFSFSKFEGSALLKDVAAEKDQGTCACTHAGRRDGDKSPRNMSLNSCWKAWWRQKSKEHVLELTPKGVTAAKVQGTCPKSKEHVLALMLEGVAATKVQGTCPKSKEHVLALMLEGVATTKVQGACPKSKEHVLALMLKGVAATKVQGTCPCTHVGRRGGGKSPRNMSKVQGICRCTHAERRGGGKSPRNMSKVQGTRPCTHAGRRGGDKSTRNMSLHSCWKARRRQKSKEHVPKFKEHVPILMLKDVAAAKVQGTCSCTHAERRGNSKSSRNMSLYSC

Homology

[Close]

BLAST of Spg010788 vs. NCBI nr
Match: TYK30263.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 104.0 bits (258), Expect = 4.4e-18
Identity = 60/96 (62.50%), Postives = 72/96 (75.00%), Query Frame = 0


Query: 1   MSMATTEEENQCVVSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPRRKIDNLDV 60
           +SMAT EEENQC  ST TR SAF+RLS+STSKK R STS FDR K+TN+Q +R+I +L  
Sbjct: 91  LSMATKEEENQCPTSTYTRTSAFKRLSISTSKKDRPSTSAFDRPKMTNNQQQREIKSLKA 150

Query: 61  KLFNEVCSDKKLQSSIPSRMKKKFSVLITTEVSLKV 97
           KLF+E   D K+ S +PSRMK+K SV I TE SL V
Sbjct: 151 KLFHEENGDDKIHSRVPSRMKRKLSVDINTESSLIV 186

[Close]

BLAST of Spg010788 vs. NCBI nr
Match: KAA0044978.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 102.8 bits (255), Expect = 9.9e-18
Identity = 59/96 (61.46%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 1   MSMATTEEENQCVVSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPRRKIDNLDV 60
           +SMAT EEENQC  ST  R SAF+RLS+STSKK R STS FDRLK+TNDQ +R++ +L  
Sbjct: 151 LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 210

Query: 61  KLFNEVCSDKKLQSSIPSRMKKKFSVLITTEVSLKV 97
           K F+E   D K+ S +PSRMK+K SV I TE SL V
Sbjct: 211 KPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSLTV 246

[Close]

BLAST of Spg010788 vs. NCBI nr
Match: KAA0050734.1 (gag protease polyprotein [Cucumis melo var. makuwa] >TYJ95698.1 gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 102.8 bits (255), Expect = 9.9e-18
Identity = 59/96 (61.46%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 1   MSMATTEEENQCVVSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPRRKIDNLDV 60
           +SMAT EEENQC  ST  R SAF+RLS+STSKK R STS FDRLK+TNDQ +R++ +L  
Sbjct: 92  LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 151

Query: 61  KLFNEVCSDKKLQSSIPSRMKKKFSVLITTEVSLKV 97
           K F+E   D K+ S +PSRMK+K SV I TE SL V
Sbjct: 152 KPFHEENGDDKIHSRVPSRMKRKLSVDINTEGSLTV 187

[Close]

BLAST of Spg010788 vs. NCBI nr
Match: KAA0065966.1 (hypothetical protein E6C27_scaffold62G00430 [Cucumis melo var. makuwa])

HSP 1 Score: 101.7 bits (252), Expect = 2.2e-17
Identity = 57/91 (62.64%), Postives = 69/91 (75.82%), Query Frame = 0


Query: 1   MSMATTEEENQCVVSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPRRKIDNLDV 60
           +SMAT EEENQC  ST TR SAF+RLS+STSKK R STS FDR K+TN+Q +R+I +L  
Sbjct: 91  LSMATKEEENQCPTSTYTRTSAFKRLSISTSKKDRPSTSAFDRPKMTNNQQQREIKSLKA 150

Query: 61  KLFNEVCSDKKLQSSIPSRMKKKFSVLITTE 92
           KLF+E   D K+ S +PSRMK+K SV I TE
Sbjct: 151 KLFHEENGDDKIHSRVPSRMKRKLSVDINTE 181

[Close]

BLAST of Spg010788 vs. NCBI nr
Match: KAA0036008.1 (Retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 101.7 bits (252), Expect = 2.2e-17
Identity = 58/96 (60.42%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 1   MSMATTEEENQCVVSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPRRKIDNLDV 60
           +SMAT EEENQC +ST  R SAF+RLS+STSKK R STS FDRLK+TNDQ +R++ +   
Sbjct: 92  LSMATKEEENQCPMSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSFKA 151

Query: 61  KLFNEVCSDKKLQSSIPSRMKKKFSVLITTEVSLKV 97
           K F+E   D K+ S +PSRMK+K SV I TE SL V
Sbjct: 152 KPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSLTV 187

[Close]

BLAST of Spg010788 vs. ExPASy TrEMBL
Match: A0A5D3E2D7 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold344G00160 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.1e-18
Identity = 60/96 (62.50%), Postives = 72/96 (75.00%), Query Frame = 0


Query: 1   MSMATTEEENQCVVSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPRRKIDNLDV 60
           +SMAT EEENQC  ST TR SAF+RLS+STSKK R STS FDR K+TN+Q +R+I +L  
Sbjct: 91  LSMATKEEENQCPTSTYTRTSAFKRLSISTSKKDRPSTSAFDRPKMTNNQQQREIKSLKA 150

Query: 61  KLFNEVCSDKKLQSSIPSRMKKKFSVLITTEVSLKV 97
           KLF+E   D K+ S +PSRMK+K SV I TE SL V
Sbjct: 151 KLFHEENGDDKIHSRVPSRMKRKLSVDINTESSLIV 186

[Close]

BLAST of Spg010788 vs. ExPASy TrEMBL
Match: A0A5D3BBF9 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00250 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.8e-18
Identity = 59/96 (61.46%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 1   MSMATTEEENQCVVSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPRRKIDNLDV 60
           +SMAT EEENQC  ST  R SAF+RLS+STSKK R STS FDRLK+TNDQ +R++ +L  
Sbjct: 92  LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 151

Query: 61  KLFNEVCSDKKLQSSIPSRMKKKFSVLITTEVSLKV 97
           K F+E   D K+ S +PSRMK+K SV I TE SL V
Sbjct: 152 KPFHEENGDDKIHSRVPSRMKRKLSVDINTEGSLTV 187

[Close]

BLAST of Spg010788 vs. ExPASy TrEMBL
Match: A0A5A7TQ06 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002860 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.8e-18
Identity = 59/96 (61.46%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 1   MSMATTEEENQCVVSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPRRKIDNLDV 60
           +SMAT EEENQC  ST  R SAF+RLS+STSKK R STS FDRLK+TNDQ +R++ +L  
Sbjct: 151 LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 210

Query: 61  KLFNEVCSDKKLQSSIPSRMKKKFSVLITTEVSLKV 97
           K F+E   D K+ S +PSRMK+K SV I TE SL V
Sbjct: 211 KPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSLTV 246

[Close]

BLAST of Spg010788 vs. ExPASy TrEMBL
Match: A0A5A7VHY3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold62G00430 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-17
Identity = 57/91 (62.64%), Postives = 69/91 (75.82%), Query Frame = 0


Query: 1   MSMATTEEENQCVVSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPRRKIDNLDV 60
           +SMAT EEENQC  ST TR SAF+RLS+STSKK R STS FDR K+TN+Q +R+I +L  
Sbjct: 91  LSMATKEEENQCPTSTYTRTSAFKRLSISTSKKDRPSTSAFDRPKMTNNQQQREIKSLKA 150

Query: 61  KLFNEVCSDKKLQSSIPSRMKKKFSVLITTE 92
           KLF+E   D K+ S +PSRMK+K SV I TE
Sbjct: 151 KLFHEENGDDKIHSRVPSRMKRKLSVDINTE 181

[Close]

BLAST of Spg010788 vs. ExPASy TrEMBL
Match: A0A5A7SZJ7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18735G00010 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-17
Identity = 58/96 (60.42%), Postives = 71/96 (73.96%), Query Frame = 0


Query: 1   MSMATTEEENQCVVSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPRRKIDNLDV 60
           +SMAT EEENQC +ST  R SAF+RLS+STSKK R STS FDRLK+TNDQ +R++ +   
Sbjct: 92  LSMATKEEENQCPMSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSFKA 151

Query: 61  KLFNEVCSDKKLQSSIPSRMKKKFSVLITTEVSLKV 97
           K F+E   D K+ S +PSRMK+K SV I TE SL V
Sbjct: 152 KPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSLTV 187

The following BLAST results are available for this feature:

BLAST of Spg010788 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK30263.1	4.4e-18	62.50	gag protease polyprotein [Cucumis melo var. makuwa]	[more]
KAA0044978.1	9.9e-18	61.46	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
KAA0050734.1	9.9e-18	61.46	gag protease polyprotein [Cucumis melo var. makuwa] >TYJ95698.1 gag protease pol...	[more]
KAA0065966.1	2.2e-17	62.64	hypothetical protein E6C27_scaffold62G00430 [Cucumis melo var. makuwa]	[more]
KAA0036008.1	2.2e-17	60.42	Retrotransposon gag protein [Cucumis melo var. makuwa]	[more]

BLAST of Spg010788 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg010788 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E2D7	2.1e-18	62.50	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5D3BBF9	4.8e-18	61.46	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7TQ06	4.8e-18	61.46	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5A7VHY3	1.1e-17	62.64	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7SZJ7	1.1e-17	60.42	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]

BLAST of Spg010788 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 475..511

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg010788.1	Spg010788.1	mRNA