Spg010773 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg010773
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold10: 6579590 .. 6585521 (+)
RNA-Seq Expression	Spg010773
Synteny	Spg010773

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCCCGGAAAAAGAATATTGTATCGGTTGGACTCTAAGCCGTGGAAAGAGTCGTGTTCTTCAATCGAATACCCAAGAGGAGCTTGGGGAGTGGAGTAGGTTGTTTGCCGAACCACTATAAATTTCCGGTGCAATTTTCTCTAACCCTCTCCTATTTAATTTTTGCAGTTAATTTTCTTTATCATAGATTGCATGAAATTAATTATTAATATTTGTTCTTCATGCTTATGGACAATATTTACATTTAAATTATTTATGGTGTTTGAAATATATTTCTAATTTGTTGATCAATTTGTGTTAAAATTAATTATTTGTAAAAAGTTCACTTATTTATTTAAATTGGGCCCATCGTAGTAAAAAGTTTATAAAATTTCATTAAACCCTATTCACCTCTCTAGGGTTGTCATATCGATCCAACACTTTTGGTCCTCTGGCTACCCCGCGTGGGTTTTGTCTTTATTTTCGAAGGATGTATATGAACTCTCTTTTGCGGTTTAATGAAGTTCTTTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAGTTGATTCCTAGCCTTTAAAGTTGGTCTAGAAAGTTTGGGAACTTATCTAACATGCCTTCAAATTTTAAATTCCTAAATTTTAAAAATGTCTCTCTAACTTCCATTTATATATTTAAAAAGTATTTAGAGTTTTGTGTTTCGTAGGTTAAATATTTTTTAAAAAATGTCAAATAGATTAAGGACTTTGTTAGACACAATTGAAAACTAAGGGAGAGTTTGGTCCAAAGGCATACAACACCCAATTGTAAGACCCACAAACTTATTAATCAATTACAACACTCTATTTTGGGTCCTATAAACTTATCAACTCCTATTCCAACACTTTATCTTTGATCCACAAACTTATTAATTTCTACTCCAACCCCTTGAGTCAAACACATAAAGCTCTCATCCCTAAATGATGAAACATGCATTAAACCCACCATAGGGTTTGAGGGTACTTGAATGTTGAAAATAACCACTTTTTAGTACTCTAAACAGTTGAAAATGCGGGTTCTAGTTTAGGTGGGAGAGCTTTATTAAAATCTTGATGTCTCTAATTAAGGGTCCGTTTGGAATACATTTTAATTTAGATGTTTTTCAAGAATGCATTTTTTAAAAAACATTTTGTATAAAAATTGTTTATAATTTAAACACTCATATGTTTGGTTGCATTTCCTCACAAATGTTTTTATACACAAGTTATTGTTTACTTGAGAAGTCTTTTTAAAAAGGTTGGTTTCAAATGTTTCTCTCAAAATGATTTATTTATCAATCTCATTTTCTTATAAGTCATTTTTCGTGGTTACCAAACACTAGAAATTTTTTTAAAATGATTTATTTTCAAAATTAAACACTTGAAAAATAAAACCAAACACACCCTAAGACGTGTTATCTTAACTCATTTGTCGATCCCACACCAAAAACGAGGAATATCCCCAGAAACCTCCACATAGAAATGTTCAGGCATTCGAAAGCAACTCAATCACGTGTGTGTAAGAGAAATAATTAACCATCTAACTTTTTCAGAAACTATTTAATATGATTCAAAGAATACAGGTGTGAAAGAGGAAACTGCAGCTGTAGAACAGAAATTAAAAGATGATTTCTATTTGTCTTTATTAGATACTTCATGATTCTTTCAAATTATTAAATATATTAAAGTGAAAGAAACGTCAATGGACGGCCACCCCACCTTCTTTTAACATTAAAAAAAAAAAAAAAAAAAGGAAAAAGAAGTTCTGATGTATCCTGTATTATGTAATGAAGATGGCGTCACATACAGAGATTGGAGTAGGCTTTTTATTTTATTTTATTTTATTGGATTAAAATTCATTTTTGGTTTCTCAACTTTCGTAAAAGTAATAATTTAGTCTTGAACTTTGATTTGTAACGATTTAGTCCCGGTACTTTTAATTTTTTAACGATTTAGTCTCTGAACTTTAATAAATAACAATTTAATCTTTATACTTTCAAATTTCTAACGATTTTGTCCCTATTGTGAAAATTAATGTAAAGATTTATTGAAATTTCTTACCTAGATAGATTAATAAACTAATTTGAGACCCTATATGTTTATAAGCTACAAAGTTTAATCATTAAGTAATAAATATCGACATTTAATTTTGATGATTTTTTTTAGACAAAGATTAAATCGTTACAAAATTGAAAGTACAGTGACTAAATTGTTACTTATTAAAATTCATAGACTAATTTTTTACAAAAAATTGAAAGTACAAAGACTAAATTGTTGCAAATCAAAGTTCAGGGACCAAATTGTTACTTTTACAAAAGTTCAGAGACTAAAAGTGATTTTTAATCTTTATTTTTTTTTTGGCACAAAAAAACATCCAAGGGGCCGTTTTTTTGGTAATCTATATAGCCACAATCTTCCGATGTCTAGAATTATATATCTCCAAAAATATAAATGTCTAACATCTCTTTAGATAACCATATTTGTTTTACAGGAAAATTTGGAGGGATGATCAAGAATATTTAAGTAACCATGTTTGTTTTGCAAAATTTCTGTACGGGAATGTCTTATAATGATGTATTATTCCAACAATACCCTTAACTATCTGTAAATCATTTATACATTAATTTAATATAATTTAAATTTATATAACATTTTTTACTTTAATAATTTAACAATCTCATTGTTATCAATTCAGTTCATATTCATTTTATATGTTGTTTTGTATAACAAATTAATTTATATTGTTTTAAGATTTTTATTAAAAAAAACTAGAATTAAATATTAATTTTGATTTTAACTTGAAATACTTTAACTTATTTTAGAAGAAGACAATTGTATAGTTGATAGCATTTTATAGTGGATTTTATTTATACATTATCAAAATAGAGAAAGTTTTGAGAGAAACGGTATTGATTTTTGACTTATGATAGTGTTTTTTTAATAAAAAAATAATGGATGATCGTTGATGAAAAAGTAAAATAAATAAATAAAAAATCACTTTCAAATTTCAATTGAAAATAGATTCAACTATATATTATAGAAATTAAGTGGAGTTTATTTTATATGTAAATGAAGCATAAAAATATAGCTAATTTCATAGAATTGTTTATTAGTGAATGAATACACTAATTTATTTTAATTATAAAATTTAAAAATTTGAGAAATAAAGAAAATTGATGAAAAAAATATACGATAAAGAAAAACGAAAGGTAAAAACATCAATGGTTCACTCAACATGGAGGAATCTCAAAAACCCATGTGTTAGAAGGACATCAAAATCTTCTTAGATGCCTCTCGTGTGGGCATCCTAAGATGTCCGAACATCTGAAGATGTCTGAACATCTTACATTACTGCAAAACAGGAGGGTGATCTAGATGCCCATTCTACGAGAATCTTGGATTACCACCAAATAAACAAGCCTCTAAATGTTTTACCTACCTTTTCTTACCTTCAAACAAATTTGTTTTAAAGAAGAGGCAAATCAGGGGCTGTGGCCATTAAGCTCGACATGAGCAAGGCCTACGACAGAGTTGAGTGGAGATTCCTAAAGGATATCATGGAGAAAATGAACTTTGGAGAAGTGTGGATTCGAAAAATTCTAAACTGCATGGAAACAGTCAAATATTCTATCCTTCTCAATGGAAGCCCCCAAGCCCAGTTCGCTCCTAGCAGGGGGCTAAGACAAGGGGATCCCCTATCCCCTTATCTTTTTCTAATGTGTGCCGAAGGTTTCTCAGCTTTACTTAGAAGGGAGGAAGCTTCTTCCAATTTATCTGGATTTCAAATTAATAATCATTGTTCAATTATATCTCATTTGTTTTTTGCAGATGACAGCCTCGTGTTCATAAAAGCAGGGAGGAAAGAGTTTCTGACGCTCAAGAGGGTGCTAGAGAGTTATGAGAAAGCTTCGGGGCAAACCATCAATATGGACAAGTCTTCCTTCATGGCCAGCAAAAATTTGAGGAGGGAAGATATGAGCTTATGCGAAAGGATTCTGGGGATCTCCAAAACTGAGTCTCTAGGCCATTACCTTGGAATGCCGTCCCAGGGAGGAAGGAACAAAGGATCTATGTTCATGGGAATCAAAGATAGAGTGGAGAAAATCCTCCAAGGATGGAAAGAGAAGCTGTTTTCTCTTGGAGGCAAAGAAGTCCTGATAAAATCAGTGGCTCAAGCGATCCCAGTTTACACTATGAGTTGTTTTCGTCTCCCTAACACTATTTGCAATGACATTGACAGGTTATGCTCCAGATTCTGGTGGGGTTCTGTGGGAGATAAGAACAAAACTCATTGGATAAGCTGGAAAAAGATGTGCAAGAGCAAAAGTTTTGGGGGGATGGGTTTTAGACACCTAGTTGCCTTCAATCAAGCCATGCTCGCAAAAGTCAGTTGGAGAATCATTAGAGACCCGAACAACATTCTTTTCAAAGTGTTGAGAGGGCGATACTTCAAGGATGGTAACTTTCTTGAGGCCCCCATTGGTCAAGCTCCTTCCCTGACTTGGAGAAGTATATGTTGGGGGAGAGAGCTTTTCAAAACAGGGATGAGATGGAGAGTCGGCAATGGTAACAAAATCATGATTGAGGAAGACCCCTGGATCTCAAGAGCAAACAATCCGAGACCAACTCTTTGTAATGACAGCCTCAAAGGCCTAAGGGTGAATAGCCTTCTTGATGATCATAATCATTGGAAGGAAGCATTAATCCTCCAATCTTTTCCCCCCCAAGTTTCGAAAGACATACTTAACATTCCTACAGGTAAGAAAGAGACCAAGGACGAGATCTTCTGGGGGCCGGACAAAAAAGGGATCTTTTCTGTCAAGAGTGCCTACCACCTAGCAATTGAATCTAGAGATGCCCAAGAAGCCTCCCAATCGGATAAAAGCAAGCAGTCCTCCTTCTGGAACAGCATCTGGAACACCAAAATCCTCCCTCGGGCCAAAGTTTGCTCATGGAAGATCATTAATGACGCTATTCCGTGCAAGGCCAACGTTTTTAACAAGGGAGTTCTTCTCAACCCTCTCTGTCCTTTATGCCAAAAGTTTGTTGAATCCACCCCTCATATTATATGGGAGTGCAAAATTATCAAAAAGTTTTGGGAAGAGGCTATTCCGAAAACTAAATCTTTGTTCAATTGTGGCAGGGAAAATTGGAATCCTAAAGATTATTGGAGCTGGATGAGAGATAACCTTTCAAAAGAAGAGTTGGAAAGAAGCCTTATTGCCATGTGGAGCGTGTGGAATTTTAGAAACAAAACAGAACATTCTCAAGTCATTCCATCAGCAGATTCTCTCCATAAAAGCTTCGAAAAGAATGTCAAGGATTGGGAAGATACAAACCTGGAAGAGCATCATCCAGTGAGCAGGCCTAGGAGCCAGGCGAGTCAAGATTCGTGGGAAGCCCCGGCGCAAAATTCGTGGAAATTGAACTCCGATGCAGCGTGGAATGAAGTTGCGAACTGTGGAGGAATTGGGTGGGTCGTTCATGACTCGAACGGATCCTTGATCTGCAGCGGATCGAAACGCATCAAGAGAAATTGGTCAATAAAATCCTTGGAAGCAAAAGCAATTTTAGAGGGGGTTAAGATGATCGAGTATACATGCTTTCGTCAAAGAATCCCCCTCGAAATTGAATCGGATGCGCTCGAAATCATCAGAGCGTTGAAGGGAGAATCTGAAGATCTCTCTGAGTCGAAGGTCATCTTAGATGAAATCATCAGTCTCGTTTCGCGGCTGGTCTCGGTGGATTTCCGCCATTATCGAAGGTCTTCGAACACAGTAGCCCACTGTGTAGCGAGAAACGCTTGTAATCTTCATTTTCGTTTTGGCCAGGAGGCTCCCCTCTCGCGGGAAAATGGGTTTCATTTTGTAGCCCCTGGCATCGTGGTGAACCCGACGTTTTGTAATCCCTCTGGTTCTCTGAGGGTTGGTGGTTAG

mRNA sequence

ATGCTCCCGGAAAAAGAATATTGTATCGGTTGGACTCTAAGCCGTGGAAAGAGTCGTGTTCTTCAATCGAATACCCAAGAGGAGCTTGGGGAGTGGAATGGCGTCACATACAGAGATTGGAGTAAGAAAGAGACCAAGGACGAGATCTTCTGGGGGCCGGACAAAAAAGGGATCTTTTCTGTCAAGAGTGCCTACCACCTAGCAATTGAATCTAGAGATGCCCAAGAAGCCTCCCAATCGGATAAAAGCAAGCAGTCCTCCTTCTGGAACAGCATCTGGAACACCAAAATCCTCCCTCGGGCCAAAGTTTGCTCATGGAAGATCATTAATGACGCTATTCCGTGCAAGGCCAACGTTTTTAACAAGGGAGTTCTTCTCAACCCTCTCTGTCCTTTATGCCAAAAGTTTGTTGAATCCACCCCTCATATTATATGGGAGTGCAAAATTATCAAAAAGTTTTGGGAAGAGGCTATTCCGAAAACTAAATCTTTGTTCAATTGTGGCAGGGAAAATTGGAATCCTAAAGATTATTGGAGCTGGATGAGAGATAACCTTTCAAAAGAAGAGTTGGAAAGAAGCCTTATTGCCATGTGGAGCGTGTGGAATTTTAGAAACAAAACAGAACATTCTCAAGTCATTCCATCAGCAGATTCTCTCCATAAAAGCTTCGAAAAGAATGTCAAGGATTGGGAAGATACAAACCTGGAAGAGCATCATCCAGTGAGCAGGCCTAGGAGCCAGGCGAGTCAAGATTCGTGGGAAGCCCCGGCGCAAAATTCGTGGAAATTGAACTCCGATGCAGCGTGGAATGAAGTTGCGAACTGTGGAGGAATTGGGTGGGTCGTTCATGACTCGAACGGATCCTTGATCTGCAGCGGATCGAAACGCATCAAGAGAAATTGGTCAATAAAATCCTTGGAAGCAAAAGCAATTTTAGAGGGGGTTAAGATGATCGAGTATACATGCTTTCGTCAAAGAATCCCCCTCGAAATTGAATCGGATGCGCTCGAAATCATCAGAGCGTTGAAGGGAGAATCTGAAGATCTCTCTGAGTCGAAGGTCATCTTAGATGAAATCATCAGTCTCGTTTCGCGGCTGGTCTCGGTGGATTTCCGCCATTATCGAAGGTCTTCGAACACAGTAGCCCACTGTGTAGCGAGAAACGCTTGTAATCTTCATTTTCGTTTTGGCCAGGAGGCTCCCCTCTCGCGGGAAAATGGGTTTCATTTTGTAGCCCCTGGCATCGTGGTGAACCCGACGTTTTGTAATCCCTCTGGTTCTCTGAGGGTTGGTGGTTAG

Coding sequence (CDS)

ATGCTCCCGGAAAAAGAATATTGTATCGGTTGGACTCTAAGCCGTGGAAAGAGTCGTGTTCTTCAATCGAATACCCAAGAGGAGCTTGGGGAGTGGAATGGCGTCACATACAGAGATTGGAGTAAGAAAGAGACCAAGGACGAGATCTTCTGGGGGCCGGACAAAAAAGGGATCTTTTCTGTCAAGAGTGCCTACCACCTAGCAATTGAATCTAGAGATGCCCAAGAAGCCTCCCAATCGGATAAAAGCAAGCAGTCCTCCTTCTGGAACAGCATCTGGAACACCAAAATCCTCCCTCGGGCCAAAGTTTGCTCATGGAAGATCATTAATGACGCTATTCCGTGCAAGGCCAACGTTTTTAACAAGGGAGTTCTTCTCAACCCTCTCTGTCCTTTATGCCAAAAGTTTGTTGAATCCACCCCTCATATTATATGGGAGTGCAAAATTATCAAAAAGTTTTGGGAAGAGGCTATTCCGAAAACTAAATCTTTGTTCAATTGTGGCAGGGAAAATTGGAATCCTAAAGATTATTGGAGCTGGATGAGAGATAACCTTTCAAAAGAAGAGTTGGAAAGAAGCCTTATTGCCATGTGGAGCGTGTGGAATTTTAGAAACAAAACAGAACATTCTCAAGTCATTCCATCAGCAGATTCTCTCCATAAAAGCTTCGAAAAGAATGTCAAGGATTGGGAAGATACAAACCTGGAAGAGCATCATCCAGTGAGCAGGCCTAGGAGCCAGGCGAGTCAAGATTCGTGGGAAGCCCCGGCGCAAAATTCGTGGAAATTGAACTCCGATGCAGCGTGGAATGAAGTTGCGAACTGTGGAGGAATTGGGTGGGTCGTTCATGACTCGAACGGATCCTTGATCTGCAGCGGATCGAAACGCATCAAGAGAAATTGGTCAATAAAATCCTTGGAAGCAAAAGCAATTTTAGAGGGGGTTAAGATGATCGAGTATACATGCTTTCGTCAAAGAATCCCCCTCGAAATTGAATCGGATGCGCTCGAAATCATCAGAGCGTTGAAGGGAGAATCTGAAGATCTCTCTGAGTCGAAGGTCATCTTAGATGAAATCATCAGTCTCGTTTCGCGGCTGGTCTCGGTGGATTTCCGCCATTATCGAAGGTCTTCGAACACAGTAGCCCACTGTGTAGCGAGAAACGCTTGTAATCTTCATTTTCGTTTTGGCCAGGAGGCTCCCCTCTCGCGGGAAAATGGGTTTCATTTTGTAGCCCCTGGCATCGTGGTGAACCCGACGTTTTGTAATCCCTCTGGTTCTCTGAGGGTTGGTGGTTAG

Protein sequence

MLPEKEYCIGWTLSRGKSRVLQSNTQEELGEWNGVTYRDWSKKETKDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWECKIIKKFWEEAIPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEEHHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALEIIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNACNLHFRFGQEAPLSRENGFHFVAPGIVVNPTFCNPSGSLRVGG

Homology

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BLAST of Spg010773 vs. NCBI nr
Match: XP_030497600.1 (uncharacterized protein LOC115713257 [Cannabis sativa])

HSP 1 Score: 156.0 bits (393), Expect = 7.4e-34
Identity = 98/355 (27.61%), Postives = 171/355 (48.17%), Query Frame = 0


Query: 41   SKKETKDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPR 100
            S   T+D   W  D  G ++VKS Y+LA    +   +S S  + Q ++W   W   +  +
Sbjct: 1006 SYNSTRDRWRWHYDSSGDYTVKSGYNLACSLENKDHSSSS--TSQEAWWQLFWGLNLPSK 1065

Query: 101  AKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWECKIIKKFWEEA--- 160
             ++  W++IN A+P   N+F++ V+ +  C LC +  ES  H ++ C   K  W+     
Sbjct: 1066 VRIFGWRVINSALPVAQNLFHRKVITSATCSLCSRAWESIGHALFSCCHAKSVWQHTSFQ 1125

Query: 161  IPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSAD 220
            +  TK+ F          DY  ++   L+K ELE+    MW +W+ RN   H + +    
Sbjct: 1126 LDFTKASF------MKDGDYLLFLSTILTKSELEKLFCTMWFIWSDRNNYIHCKQLKHPM 1185

Query: 221  SLHKSFEKNVKDWEDTNLEEHHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGG 280
            ++    E  + ++          VS   + A    W  P +++ K+N DAA +   N  G
Sbjct: 1186 AISSQAEAYLANFHSVKSATAPAVSCVAADARTVKWVPPTESNLKMNVDAALDSSRNKIG 1245

Query: 281  IGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALE 340
            IG ++ DS G +I + SK +  N+  + +EAKA+  G++  +     Q  P  +E+D L 
Sbjct: 1246 IGVIIRDSTGRVIAAMSKPVVGNFKSQEMEAKAMFWGLQWAKQL---QLQPHCVETDCLM 1305

Query: 341  IIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNACNL 393
            ++ AL+G+   LS    ++++I   +S   +    H RR +N  AH +A+ A  L
Sbjct: 1306 LVHALQGKQSQLSSFHDLVEDISYHLSSFSNACISHVRRDANQAAHGLAKQALQL 1349

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BLAST of Spg010773 vs. NCBI nr
Match: XP_042974832.1 (uncharacterized protein LOC122306468 [Carya illinoinensis])

HSP 1 Score: 154.8 bits (390), Expect = 1.6e-33
Identity = 102/353 (28.90%), Postives = 167/353 (47.31%), Query Frame = 0


Query: 47   DEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCSW 106
            D + WG  + G+FSVKS YHL  E     EA  S    QS  W  +W  ++    KV  W
Sbjct: 1009 DRLIWGCTQNGLFSVKSGYHLHQEIHANPEAGPSKPKDQSELWKGVWKLQVPNGVKVFIW 1068

Query: 107  KIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWECKIIKKFWEEAIPKTKSLFN 166
            +  N+ +P  AN+  + ++    CP+C +  E+  H +W C   +  W +A   +K +  
Sbjct: 1069 RACNEGLPTLANLKRRKIVAESTCPICGRVEETADHALWSCSAARDVWCQA---SKPIQK 1128

Query: 167  CGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEKN 226
               E  + K+ W  + D L    +E     M  +W  RN+  H +     +S+     K 
Sbjct: 1129 LSLEVGSFKEVWQQITDKLPAARIEEVGSIMRLIWTRRNEVVHGKAFRHPNSI---LVKA 1188

Query: 227  VKDWEDTNLEEHHPVSRPRSQASQ--DSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHD 286
              D     L     VS   ++ S+    W  P    +KLN DAA N+  N  GIG ++ D
Sbjct: 1189 QDDLYCYKLAIQGRVSCRAAETSKCPQKWITPPVGEYKLNWDAAINQPLNQVGIGAIIRD 1248

Query: 287  SNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALEIIRALKG 346
             NG ++ +   R + N S  + EA A++  V   +   FR  I    E D+L+++  ++ 
Sbjct: 1249 CNGQVLGTMRARRELNLSPFTAEAYALMMAVIFCKEAGFRSII---FEGDSLKVVEGMQK 1308

Query: 347  ESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNA----CNLH 394
            +++D S+  +I+++   L+  LV   F H +R SN  AH +A+NA    C+L+
Sbjct: 1309 KAKDWSQGGLIIEDTKLLLQDLVRWKFCHTKRDSNMAAHLLAKNALLNDCDLY 1352

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BLAST of Spg010773 vs. NCBI nr
Match: XP_030964861.1 (uncharacterized protein LOC115986145 [Quercus lobata])

HSP 1 Score: 151.8 bits (382), Expect = 1.4e-32
Identity = 99/352 (28.12%), Postives = 172/352 (48.86%), Query Frame = 0


Query: 41   SKKETKDEIFWGPDKKGIFSVKSAYHLA---IESRDAQEASQSDKSKQSSFWNSIWNTKI 100
            S   T D I W  +K+G++SVKS Y++A   +++ +  E S S K +Q   W+ +W  ++
Sbjct: 810  SHSHTSDAIVWSQNKRGVYSVKSGYYVARQNLKNENWAECSSSPKGRQ--VWSKLWKLRV 869

Query: 101  LPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWECKIIKKFWEEA 160
              + KV  W+  ++ +P + N+  + +L +  C LC +  E+  H +WEC + K  W   
Sbjct: 870  PNKIKVFGWRACHNILPTRDNLVRRKILEDDGCMLCSRMAETGVHALWECAVAKDVWSSN 929

Query: 161  IPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSAD 220
            + +   L  CG++  +    +  + + LS  + E  L+  W +WN RN   H   +    
Sbjct: 930  MIR---LQKCGQDQQDVLQLFQELMERLSTAKFEAFLVQSWLIWNQRNTVMHGGKLKDPS 989

Query: 221  SLHKSFEKNVKDWEDTNLEEHHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGG 280
             L+K  +  ++D+     +   PV+   S +  D+W  P +  +KLN DAA      C G
Sbjct: 990  WLNKRAKDYLEDFHQAQGQLQIPVT---SSSGHDTWFPPPEPIYKLNFDAAIFSKLGCSG 1049

Query: 281  IGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALE 340
            +G V+ + +  ++ + S R      I + EA+ IL   K +E+        L IE D   
Sbjct: 1050 VGAVIRNVHDEVMAAMSARGPP--VIDNSEAE-ILACRKALEFAVDAGFTDLVIEGDNEN 1109

Query: 341  IIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNA 390
            ++R++     DLS    I+ +I  L   L  V F   +R +N+VAH +AR A
Sbjct: 1110 VMRSVSASGADLSRLGHIIQDIKWLAHGLRWVSFSSIKRGANSVAHSIARYA 1150

[Close]

BLAST of Spg010773 vs. NCBI nr
Match: XP_042956310.1 (uncharacterized protein LOC122292152 [Carya illinoinensis])

HSP 1 Score: 151.8 bits (382), Expect = 1.4e-32
Identity = 103/347 (29.68%), Postives = 169/347 (48.70%), Query Frame = 0


Query: 46   KDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCS 105
            +D I WG  K G+FSVKSAYHL  E    +E+  S        W SIW  K+    +   
Sbjct: 1009 EDRIIWGGTKNGLFSVKSAYHLHKEISSLKESGTSKDHAFCENWQSIWKLKVPNVVRNFL 1068

Query: 106  WKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWECKIIKKFWEEA-IPKTKSL 165
            WK  ++A+P   N+  + V  + LCP+CQ   E++ H +W C + K  W +A I   K  
Sbjct: 1069 WKASSEALPIMDNLHRRKVSEHFLCPICQLERETSGHALWGCGVAKDVWGQASIKIMKMS 1128

Query: 166  FNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFE 225
              C +     +D W+ + + L K ELE + +    +WN RN+  H +      S+ +  +
Sbjct: 1129 LQCDQF----RDIWAHLTEKLPKAELEMAGLIARLIWNRRNEFVHGKGFRHPISILQKAK 1188

Query: 226  KNVKDWEDTNLEEHHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHD 285
             + + +  T  +    +   R+Q ++  W  P    +KLN DAA +      GIG +V D
Sbjct: 1189 DDHRAYHLTRTKGGTHLDTSRTQ-NEQKWRKPPVGRYKLNWDAALDTSRGLTGIGALVRD 1248

Query: 286  SNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALEIIRALKG 345
             NG ++ S     + N S  S EA A++  ++  +   F   I    E D+L+++R +K 
Sbjct: 1249 WNGKVLGSVRTYRQLNLSPLSAEAYALMVAIQFCKDHGFTNII---CEGDSLQVVRKMKS 1308

Query: 346  ESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNACN 392
              ED S+  +I+++  +L+      D  H +R SN  A  +A++A N
Sbjct: 1309 FEEDWSQEGLIIEDAKTLLKSFSYWDIIHTKRDSNMAADLLAKDALN 1347

[Close]

BLAST of Spg010773 vs. NCBI nr
Match: XP_042958247.1 (uncharacterized protein LOC122293873 [Carya illinoinensis])

HSP 1 Score: 150.2 bits (378), Expect = 4.1e-32
Identity = 103/347 (29.68%), Postives = 168/347 (48.41%), Query Frame = 0


Query: 46   KDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCS 105
            +D I WG  K G+FSVKSAYHL  E    +E+  S        W SIW  K+    +   
Sbjct: 1009 EDRIIWGGTKNGLFSVKSAYHLHKEISSLKESGTSKDHAFCENWQSIWKLKVPNVVRNFL 1068

Query: 106  WKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWECKIIKKFWEEA-IPKTKSL 165
            WK  ++A+P   N+  + V  + LCP+CQ   E++ H +W C   K  W +A I   K  
Sbjct: 1069 WKASSEALPIMDNLHRRKVSEHFLCPICQLERETSGHALWGCGAAKDVWGQASIKIMKMS 1128

Query: 166  FNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFE 225
              C +     +D W+ + + L K ELE + +    +WN RN+  H +      S+ +  +
Sbjct: 1129 LQCDQF----RDIWAHLTEKLPKAELEMAGLIARLIWNRRNEFVHGKGFRHPISILQKAK 1188

Query: 226  KNVKDWEDTNLEEHHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHD 285
             + + +  T  +    +   R+Q ++  W  P    +KLN DAA +      GIG +V D
Sbjct: 1189 DDHRAYHLTRTKGGTHLDTSRTQ-NEQKWRKPPVGRYKLNWDAALDTSRGLTGIGALVRD 1248

Query: 286  SNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALEIIRALKG 345
             NG ++ S     + N S  S EA A++  ++  +   F   I    E D+L+++R +K 
Sbjct: 1249 WNGKVLGSVRTYRQLNLSPLSAEAYALMVAIQFCKDHGFTNII---CEGDSLQVVRKMKS 1308

Query: 346  ESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNACN 392
              ED S+  +I+++  +L+      D  H +R SN  A  +A++A N
Sbjct: 1309 FEEDWSQEGLIIEDAKTLLKSFSYWDIIHTKRDSNMAADLLAKDALN 1347

[Close]

BLAST of Spg010773 vs. ExPASy TrEMBL
Match: A0A2N9E9A1 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3428 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.2e-35
Identity = 96/344 (27.91%), Postives = 175/344 (50.87%), Query Frame = 0


Query: 46   KDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVCS 105
            +D + WG  + GI++V+S YHL ++ +  +    SD + Q+  W SIW+  +  + +   
Sbjct: 1423 EDMLIWGGTRSGIYAVRSGYHLLLDEKQRETPGVSDAAAQTQVWKSIWSLPVPTKVRHFL 1482

Query: 106  WKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWECKIIKKFWEEAIPKTKSLF 165
            W+  +D++P K N+ ++ VL +P CP C   VEST H + +CK +++ W +A P  + L 
Sbjct: 1483 WRACHDSLPTKKNLHHRHVLNDPHCPNCTNSVESTLHALVQCKNLQRIW-QATPWGRHLA 1542

Query: 166  NCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLHKSFEK 225
                 ++   + +      L  +EL    + +WS+W  RN+   +Q I   D L     +
Sbjct: 1543 EASFVDF--MELYHRNMQTLQAQELHLFTMVIWSIWYRRNRQRLNQPIEDIDRLLPRASE 1602

Query: 226  NVKDWEDTNLEEHHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDS 285
             + +++     +H P +RP    +   W  P    +K+N D A    +N  GIG +V + 
Sbjct: 1603 LLTEFQQAQ-NDHSPPARPPEPPTVIKWAPPRPGRYKVNFDGAVFRESNEAGIGAIVRNH 1662

Query: 286  NGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALEIIRALKGE 345
             G ++ +  +RI   +SI+++EA A    V  +     ++   ++IE D+L+II AL+  
Sbjct: 1663 RGEVMAALCQRIPYPYSIEAVEASAAKAAVTFVLDLGIQE---VDIEGDSLKIITALQQI 1722

Query: 346  SEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNA 390
            S   +    ++ +  +L   L S  F H +R  N+VAH +A+ A
Sbjct: 1723 SPCYTSYGHLILDTNTLAQNLTSYQFMHVKRDGNSVAHSLAKRA 1759

[Close]

BLAST of Spg010773 vs. ExPASy TrEMBL
Match: A0A803QEG9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.6e-34
Identity = 105/371 (28.30%), Postives = 180/371 (48.52%), Query Frame = 0


Query: 45   TKDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPRAKVC 104
            T+D++ W     G F+V+SAYHLA    +   +S S  + Q  +W   W+ +I  + K+ 
Sbjct: 1506 TRDKLIWHHHSSGNFTVQSAYHLATSLENEDLSSSSTSAVQ--WWKHFWSLQIPQKVKIF 1565

Query: 105  SWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWECKIIKKFWEEAIPKTKSL 164
            +W++I+DA+P   ++  + ++ +  C +C++  EST H ++ CK  K  W          
Sbjct: 1566 AWRVIHDALPVATSLVRRKIITDSTCSICKQAWESTGHALFGCKYAKAVWR------SFH 1625

Query: 165  FNCGRENWNPK------DYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADS 224
            FN    NW+        DY  ++    +K E+E     MW++W  RNK  H +    A+ 
Sbjct: 1626 FNF---NWSAAISMKNGDYLMYLSSIYNKAEMEELFCIMWAIWGERNKVVHGKNARRAND 1685

Query: 225  L---HKSFEKNVKDWE-------------DTNLEEHHPVSRPRSQASQDSWEAPAQNSWK 284
            L      F +N +  +             D       P   P + A+  SW  PA + +K
Sbjct: 1686 LAVFATVFLQNFRAAQHKPVAAATAPAATDVAGPSQQPSKPPAATAALSSWRPPAADCYK 1745

Query: 285  LNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTC 344
            LN+DAA    +N  G+G V+ D++GS+  + +  I  N+    +EAKA+   +       
Sbjct: 1746 LNTDAAAENSSNTIGVGAVLRDASGSVTGALAMPIIGNFKSHEMEAKALFHSLNW----A 1805

Query: 345  FRQRIPL-EIESDALEIIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTV 393
             +Q++P+  IE+DAL ++ ALK      SE   ++ ++ SL+S   +V   H  R++N  
Sbjct: 1806 LQQQLPITHIETDALMVVNALKAPFNSNSEFSDLISDVHSLLSFFPNVSVSHVYRTANNA 1861

[Close]

BLAST of Spg010773 vs. ExPASy TrEMBL
Match: A0A803PIB6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.6e-34
Identity = 98/355 (27.61%), Postives = 171/355 (48.17%), Query Frame = 0


Query: 41   SKKETKDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPR 100
            S   T+D   W  D  G ++VKS Y+LA    +   +S S  + Q ++W   W   +  +
Sbjct: 1466 SYNSTRDRWRWHYDSSGDYTVKSGYNLACSLENKDHSSSS--TSQEAWWQLFWGLNLPSK 1525

Query: 101  AKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWECKIIKKFWEEA--- 160
             ++  W++IN A+P   N+F++ V+ +  C LC +  ES  H ++ C   K  W+     
Sbjct: 1526 VRIFGWRVINSALPVAQNLFHRKVITSATCSLCSRAWESIGHALFSCCHAKSVWQHTSFQ 1585

Query: 161  IPKTKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSAD 220
            +  TK+ F          DY  ++   L+K ELE+    MW +W+ RN   H + +    
Sbjct: 1586 LDFTKASF------MKDGDYLLFLSTILTKSELEKLFCTMWFIWSDRNNYIHCKQLKHPM 1645

Query: 221  SLHKSFEKNVKDWEDTNLEEHHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGG 280
            ++    E  + ++          VS   + A    W  P +++ K+N DAA +   N  G
Sbjct: 1646 AISSQAEAYLANFHSVKSATAPAVSCVAADARTVKWVPPTESNLKMNVDAALDSSRNKIG 1705

Query: 281  IGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALE 340
            IG ++ DS G +I + SK +  N+  + +EAKA+  G++  +     Q  P  +E+D L 
Sbjct: 1706 IGVIIRDSTGRVIAAMSKPVVGNFKSQEMEAKAMFWGLQWAKQL---QLQPHCVETDCLM 1765

Query: 341  IIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNACNL 393
            ++ AL+G+   LS    ++++I   +S   +    H RR +N  AH +A+ A  L
Sbjct: 1766 LVHALQGKQSQLSSFHDLVEDISYHLSSFSNACISHVRRDANQAAHGLAKQALQL 1809

[Close]

BLAST of Spg010773 vs. ExPASy TrEMBL
Match: A0A2N9H1N4 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33433 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.0e-33
Identity = 93/349 (26.65%), Postives = 174/349 (49.86%), Query Frame = 0


Query: 41   SKKETKDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPR 100
            S +   D + WG  K G++SVKS YHL +     +E+  SD S+ S  W S+W+  + P+
Sbjct: 1204 SHRNHTDCLVWGETKNGVYSVKSGYHLLLNDSCREESGPSDPSQMSQLWKSVWSLNVPPK 1263

Query: 101  AKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWECKIIKKFWEEAIPK 160
             +   W+  ++++P ++N+ ++ +L +P C +C K +EST H +W+CK ++  W ++I  
Sbjct: 1264 TRHFLWRACHNSLPTRSNLHHRHILDDPRCTICSKQLESTIHALWQCKKVQSVW-KSISW 1323

Query: 161  TKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHSQVIPSADSLH 220
             + L      ++   D        LS  EL+   +  WS+W  RN+    Q + +   L 
Sbjct: 1324 GQQLAESTYTDF--IDLLHKCFSLLSTSELQLFSMICWSIWYRRNRLRLQQSVDNDLQLV 1383

Query: 221  KSFEKNVKDWEDTNLEEHHPVSRPRSQASQDSWEAPAQNSWKLNSDAAWNEVANCGGIGW 280
            +    ++ ++++    E     +P S A+   W  PAQ  +K+N D A    +N  GIG 
Sbjct: 1384 QRARDSMSEFQEAQDREQQLPQQPSSSATV-KWNPPAQGRYKVNYDGAIFSDSNAAGIGV 1443

Query: 281  VVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIESDALEIIR 340
            ++ +  G ++ S S+R     S++++EA A    ++      F +   +++E D+  ++ 
Sbjct: 1444 IIRNHQGEVMGSLSQRFPFPHSVEAVEASAARSAIQFARDLGFTK---IDLEGDSKTVVE 1503

Query: 341  ALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNA 390
            AL       +    I+++   +   L SV F H  R  N +AH +A+ A
Sbjct: 1504 ALILREPCTTMYNHIIEDTKQIAQSLQSVLFLHTNREGNVMAHLLAKRA 1545

[Close]

BLAST of Spg010773 vs. ExPASy TrEMBL
Match: A0A2N9GI95 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS27032 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.2e-33
Identity = 94/357 (26.33%), Postives = 180/357 (50.42%), Query Frame = 0


Query: 41   SKKETKDEIFWGPDKKGIFSVKSAYHLAIESRDAQEASQSDKSKQSSFWNSIWNTKILPR 100
            S     D + WG  + G ++V+S YHL I+ +   +    D ++ ++ W+SIW+ ++ P+
Sbjct: 967  SSHPQSDCLVWGGTRNGRYAVRSGYHLLIQEKAQADPGPFDTTEMTNLWHSIWSLQVPPK 1026

Query: 101  AKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWECKIIKKFWEEAIPK 160
             + C W+  ++++P + N+ ++ ++ +P C  C   VE+T H +W CK I+  W + +P 
Sbjct: 1027 TRHCLWRACHESLPTRRNLHHRHIIDDPTCENCSNQVETTLHALWNCKTIQVVW-QTLPW 1086

Query: 161  TKSLFNCGRENWNPKDYWSWMRDNLSKEELERSLIAMWSVWNFRNKT-------EHSQVI 220
             + L      ++   D W      LS  EL+   +  W +W  RN+        + ++++
Sbjct: 1087 GRRLQGVTYADF--MDLWHRCTQLLSTTELQLFSMVTWLIWYHRNRVRLHQPTDQITRIV 1146

Query: 221  PSADSLHKSFEKNVKDWEDTNLEEHHPVSRPRSQASQ-DSWEAPAQNSWKLNSDAAWNEV 280
            P A  L   F         TN ++  PVS   S+AS    W+ PA+  +K+N D A    
Sbjct: 1147 PRAQELITKF---------TNEQDRPPVSLSVSKASAVIKWQPPAEGRYKVNYDGAIFRN 1206

Query: 281  ANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGVKMIEYTCFRQRIPLEIE 340
             N  G+G ++ ++ G+++ S  +R+    SI+++EA A    ++  +   F +   +E+E
Sbjct: 1207 TNEAGLGVIIRNARGAVMGSMCQRVPFPHSIEAVEASAARCAIQFAKDLGFPE---IELE 1266

Query: 341  SDALEIIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYRRSSNTVAHCVARNA 390
             D+  ++ AL       +    I+++I  +   L SV F+H +R  N +AH +A+ A
Sbjct: 1267 GDSKIVVDALLFSGPCTTFYGHIIEDIKLIARGLSSVHFQHVKRDGNNLAHLLAKRA 1308

[Close]

BLAST of Spg010773 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.7e-12
Identity = 47/209 (22.49%), Postives = 88/209 (42.11%), Query Frame = 0


Query: 92  IWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWECKIIK 151
           IW  K  P+ K   WK+++ A+    N+  + +  +P C  C +  E++ H+ ++C   +
Sbjct: 18  IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77

Query: 152 KFWEEAIPKTKSLFNCGRENWNPKD-YWSWMRDNLSKEELERSLIAMWSVWNFRNKTEHS 211
           + W  +    + L   G       +   S    N   +    ++  +W +W  RN+    
Sbjct: 78  QVWRASGIPHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSRNQLVFQ 137

Query: 212 QVIPSADSLHKSFEKNVKDWEDTNL------EEHHPVSRPRSQASQDSWEAPAQNSWKLN 271
           Q   S  +  +    +V++WEDTN       ++ H     +   ++  W+ P     K N
Sbjct: 138 QKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRHQQPTMARTKWQRPPSTWIKYN 197

Query: 272 SDAAWNEVANCGGIGWVVHDSNGSLICSG 294
            D A+N        GW++ D NG  + SG
Sbjct: 198 YDGAFNHQTRNAKAGWLMRDENGVYMGSG 226

[Close]

BLAST of Spg010773 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 53.5 bits (127), Expect = 4.8e-07
Identity = 20/61 (32.79%), Postives = 37/61 (60.66%), Query Frame = 0


Query: 92  IWNTKILPRAKVCSWKIINDAIPCKANVFNKGVLLNPLCPLCQKFVESTPHIIWECKIIK 151
           IW+ KI P+ K+  WK +N+A+P  A + ++ + + P C  C+ F E+  HI++ C   +
Sbjct: 9   IWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRCRDF-ETITHILFNCPFAQ 68

Query: 152 K 153
           +
Sbjct: 69  R 68

[Close]

BLAST of Spg010773 vs. TAIR 10
Match: AT4G09775.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT2G02650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 53.5 bits (127), Expect = 4.8e-07
Identity = 31/127 (24.41%), Postives = 60/127 (47.24%), Query Frame = 0


Query: 197 MWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDWEDTNLEE---HHPVSRPRSQASQDS- 256
           MW +W  RN+    Q+      + +  E+   +W +T + +    H   +P  + S  S 
Sbjct: 1   MWRLWKSRNEFLFQQIDRFPWKVAQKGEQEATEWVETTINDTANSHSTEQPNDRPSGRSK 60

Query: 257 -WEAPAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAI 316
            W  P +   K N D+ + +  +     W++ DSNG +I SG  ++++++S    EA   
Sbjct: 61  EWSPPPEGYLKCNFDSGYVQGRDYTSTCWIIRDSNGHVIHSGCAKLQQSYSALQAEALGF 120

Query: 317 LEGVKMI 319
           L  ++M+
Sbjct: 121 LHALQMV 127

[Close]

BLAST of Spg010773 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 4.1e-06
Identity = 39/194 (20.10%), Postives = 80/194 (41.24%), Query Frame = 0


Query: 197 MWSVWNFRNKTEHSQVIPSADSLHKSFEKNVKDW-EDTNLEEHHPVSRPRSQASQDSWEA 256
           MW +W   N    +       +  +    + K+W ++T   E    +R    +    W  
Sbjct: 48  MWRIWKSGNDLVFNHTRTKFQTTVEMALNDTKEWLDNTMTNEQQNGNRNADPSRNTKWSP 107

Query: 257 PAQNSWKLNSDAAWNEVANCGGIGWVVHDSNGSLICSGSKRIKRNWSIKSLEAKAILEGV 316
           P ++  K N DA+ +E     G+GW++ +S G++I  G  + +   + +  E   ++  +
Sbjct: 108 PGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTLIWAI 167

Query: 317 KMIEYTCFRQRIPLEIESDALEIIRALKGESEDLSESKVILDEIISLVSRLVSVDFRHYR 376
           +   Y    +++  E ++  +  +   K  +  L      LD I S +    S++F    
Sbjct: 168 Q-ASYGFGHKKVIFEGDNQTITRMINTKSSNPRLQH---FLDTIQSWIPSFESIEFSFKH 227

Query: 377 RSSNTVAHCVARNA 390
           R  N  A  +A+ A
Sbjct: 228 REQNGCADFLAKQA 237

The following BLAST results are available for this feature:

BLAST of Spg010773 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_030497600.1	7.4e-34	27.61	uncharacterized protein LOC115713257 [Cannabis sativa]	[more]
XP_042974832.1	1.6e-33	28.90	uncharacterized protein LOC122306468 [Carya illinoinensis]	[more]
XP_030964861.1	1.4e-32	28.13	uncharacterized protein LOC115986145 [Quercus lobata]	[more]
XP_042956310.1	1.4e-32	29.68	uncharacterized protein LOC122292152 [Carya illinoinensis]	[more]
XP_042958247.1	4.1e-32	29.68	uncharacterized protein LOC122293873 [Carya illinoinensis]	[more]

BLAST of Spg010773 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg010773 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9E9A1	4.2e-35	27.91	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]
A0A803QEG9	3.6e-34	28.30	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803PIB6	3.6e-34	27.61	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A2N9H1N4	1.0e-33	26.65	RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33433 ...	[more]
A0A2N9GI95	5.2e-33	26.33	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]

BLAST of Spg010773 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25270.1	1.7e-12	22.49	Ribonuclease H-like superfamily protein	[more]
AT3G26855.1	4.8e-07	32.79	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT4G09775.1	4.8e-07	24.41	BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily prot...	[more]
AT5G65005.1	4.1e-06	20.10	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 260..393 e-value: 3.9E-12 score: 48.3
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 59..154 e-value: 7.8E-16 score: 58.6
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 264..389 e-value: 5.1E-22 score: 78.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..256
None	No IPR available	PANTHER	PTHR46736:SF6	SUBFAMILY NOT NAMED	coord: 44..341
None	No IPR available	PANTHER	PTHR46736	FAMILY NOT NAMED	coord: 44..341
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 263..387 e-value: 1.23632E-16 score: 73.8876
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 260..392

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg010773.1	Spg010773.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity