Spg010710 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg010710
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionoxysterol-binding protein-related protein 2A-like isoform X2
Locationscaffold10: 6453766 .. 6457354 (-)
RNA-Seq ExpressionSpg010710
SyntenySpg010710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTATTAAAGTTGAGTCTTCCTTTTTAGATGTGGTTCACGCAACCCTAAGAGAAAGAAATTGAAATTTTCTCCCTTCCAATGAATTTTCTCCCTCACCCTCGCTCTCTCTCTCTGTGTAAGATCATCACTGGCAGCCCGACGACGTCGCCACAGCCATGACGCCGAGTTTGCCGCCGCAGGAACGTTGTCGTTTCGCCGCACATCGCCGCAGTTGGTTGCGATTCCGAGCGTGGGTATTGTCACTGTTTTAATCGCCACTCAGTCCTTCCCCATCGTCGTCGGTGCAATCGCCATCCAGCTGCCAGCTGCCGCTGATTGTTTGTACAATAGAAAGTATCTCTATTCGCGTTGGTTTGGTCGAATCTGGTAAGATGTAATGCCTTATTGAAGTTTTAAGCAATTTCCTTAGGAATTAAAACTAACCCACATGTTCCCCATCTTGATTTTAGACTCTTGGTCATGTCCCCAATGATTGAATTCAAATATCGAGCAATCTAAGTTGCTGTCCAGCAAGAGAATTGTGATTTTGGTGAGTTTTTCTTCTCCGTTTAAGCCTCGTTAGCAATTATTTTTACTAATTAGAGTTGACCCATGATTGTTTGGATAAATTTCAGCATTTGCCATTAAATTTTGACACCGTATACACGTAGTTTCGCCCTAATGAAGTTTTGTCCAGCTACTGTCCGGATAGTTTTTAGTGAATTTCCAAGGGTAAAGGCCCTCCTTACACTAAATTGGGTTTAAATAAAATTATTGGATTAAGTTGTCTAATTTTGGAAAAGTCCTCGTGTGTACTTGTAGACATTTTTGCACAAGGACTAAGAGCATCATTGGATTAAGAATTTGAGTAAAATTCTTCTACATACTTGTAAGTGACTTTACTATTGAATTTTTATTGGGAGCTTGTATTGATCTTTTATTTGTGGGGTTTCTTTCTAGGTTTTGTTTTTTTTGTTTTTAGTTTGAGGATTTTGGAAATTTGTTCTTCAGGTTTTGGAAACAGAGGATTAGGCTTTGATGTTAGGTTTGAGTGAGGGGTTTTAATTTTGAGGGATTGAGAGTTTCTTTCTTTCAGGGTTTTGTTTGCTTGTGATTTTCTGTATGTGAATATTTTGTTTGGGGAATTGAATGGAAGACCGAGAGATATTGAAATAGAGTTAATGTTGCACAAGTTGTTTCTTTCAAATGCTAAAAAGAATATGGAAATAGTCTTCTTGTTTGATCATTTTATTTGAAGAGTATTTTTGCACGATCCCCTCCAAAATCGATGTTGGGTATTTAAGAAATTTACATTATGTAGTACACTATTAAAAATAAATTTTCAGATTGAGATAGAGCTATTTATGAAATGTTTATGTTGTGATAAATTTGACATTATATTCTTTATATATGTTTTATCACATTTTGTTAATTTTTTAAAATGATCTAATTAGGAATGTCAAAAGTTTAGGTATTTATTTAGTTGTATTGTATTTCATATGTGAGAAATGTCTAACTATATAAATAGGTGAGGACTATGTTATCTATTACCTCCTTCCTAGTTTCTCTTGTGACCTGTTCTGTTTAGTTTGGTAAGTTGAGATGACATTGTTGATATCTAAGTCATGTTTGGTTCATGGCTATGTTGGACATTTCCAAAATAAGGTTCTCAGAAATGTGTCGTGTTGTTTGTGTCGTATGGGAGAGTTTCTAGCAAGAAGAGTTAGAATGTATTCGTACCCCCCGCACCGCCAGTTTCTTCTTCACACAACCCTGTTTTCTTCTTCGCGCAAGCAACAGGAGTCGTCTCTCCATGCGACGCATGACCAACCACCGCAACGAAGCGTTTCGGCTTTTTTGGTAAGTTTAGCCTCGACCCACTCGATTTCTTCATTTTTCAGCTTATGCCCATGTAGTTTTAGACTTCAAAATTGTTCTAGATCATGACCCATGCTTATCTTTATATACATTGTATTGTCTATTTAATATTATCATCTCAGGACTTTTCTTACTCGCATGTATCCTAATGTCAGATATACTTGGGGCTAGCTCAATGCAGGGGTAATAGATAAACTAACCGAAAATGCATATACACATCTAACTGAATCTGATTTTTATGCTGAAGCGAATTTTTAAGTAGATTACTTCGTATAGGACATATGTGAAGGATTGATCTTTTAATTGTCGTAAGTGTCTAGATATATTTGGTTTTAACTTAGAAAAGGATTATATATAATCTAAGCATTACTTTTCTTTTCACTATGAGTTTGTCCATTGTGGCACAATGTCCTCATCTTCAGTGTTCGATGAGTCCAGCTAGGGTCAATAAATTGATTCTTGTATCAGTTCATATGGTTTAGTGGGTATATATGTATTATCATGTAACTAATGTGCCTGATAAGAGATTTTACCGTTTTATACTCAGGCTGCTAATTTTGAAGCTGAAGCTTTTGGAATGAATGATGGCGAATTTCAACTGACAAAGCATGATCTTTCCTCTAAAGAACATGGAAAATATAGTGGTTCTTTCTCTTCTCTTTTCTTCTCCTTATTTGATTGAACTCTGCTTTAAATATACTTATTTTCTCGTTGCAGCATGTGGTCTATGTTTGCTATAAATACATGTCAAAGTTTTCAACCAGAAGAAACTTGTGTTGGTTAAGATTTTGAAAATATAGTTTTTGTTTATTTTGACAATTATGCCAATTGAGATTTAGAAAACTATAAGATCTTGAATGATTCTTTGTCATATATATAAAAAAAAAAGATCTTGAAGGATGAGGAAAGAACCTTTGATAGTGTTTCTTTTAACCCTCTTTCTCTTTGTAGCCCTCTCTTATTGCTAAAATGCCCCTCTTTCACAATTGTAGTACGAGGATCAACCGGGGAAGTTTTTTTTTTTTTTATTTATTTGTAATCTCCTTTTGTTTGGGGTTTGGCTTTCCTTTTTTTCTTTTCTTCGTAATTTCATCATATGCATGGAATTGTTTCTTCTCAGACAGATTCAGTAAATTATGTTGGGTCTTCCTAGCTCTCTATTTTCATTAACACTAAAAAGATATGGTTTCATGTCTTTTGGGTTTTTAAACTATAAGATGTGATTTTGAAAGTTTATGCTGGTTAAGTTGATAGATGCTGATTTTTACTTCTAAATCATAAATTGGTAAACTTCTTGTCTCAACAATATGTTGATTTATTACACGTGTTGAATTATATATGTAGTGTGTTCAACAATCGGGATCTACGGAGTGTGGATATTACATAGTATCCCATAGGAGCAGAGTGATTACAGATGTGGTACTAATCGATTTAGCCTTGTATTCAACTTAATCTTTTATATTTATTATAATTTTTGTAATGTAGTATGTTTACTTAATTTTTTTTTGTTTGCAGTTGACGAGAGGAAATGCATTTAGCCAATCAGAATTCGATGAGATAAGAGTTGAATTATGTGAATATGTAGCACAATACATGTGATGATTGTTTTCTAATGTTATACTTAGTTTTTTTAATTCGTTTTTTAGACAACTTGCTAGACACTGTGATATGTTCTTAGTTTAATGAAATTAATATTATGACTGACTTAAGTTGTGTTCTTAGATATCTTT

mRNA sequence

ATGACATTGTTGATATCTAAGTCATGTTTGGTTCATGGCTATGTTGGACATTTCCAAAATAAGGTTCTCAGAAATGTGTCGTGTTGTTTGTGTCGTATGGGAGAGTTTCTAGCAAGAAGAGTTAGAATGTATTCGTACCCCCCGCACCGCCAGTTTCTTCTTCACACAACCCTGTTTTCTTCTTCGCGCAAGCAACAGGAGTCGTCTCTCCATGCGACGCATGACCAACCACCGCAACGAAGCGTTTCGGCTTTTTTGGCTGCTAATTTTGAAGCTGAAGCTTTTGGAATGAATGATGGCGAATTTCAACTGACAAAGCATGATCTTTCCTCTAAAGAACATGGAAAATATAGTGTTGACGAGAGGAAATGCATTTAG

Coding sequence (CDS)

ATGACATTGTTGATATCTAAGTCATGTTTGGTTCATGGCTATGTTGGACATTTCCAAAATAAGGTTCTCAGAAATGTGTCGTGTTGTTTGTGTCGTATGGGAGAGTTTCTAGCAAGAAGAGTTAGAATGTATTCGTACCCCCCGCACCGCCAGTTTCTTCTTCACACAACCCTGTTTTCTTCTTCGCGCAAGCAACAGGAGTCGTCTCTCCATGCGACGCATGACCAACCACCGCAACGAAGCGTTTCGGCTTTTTTGGCTGCTAATTTTGAAGCTGAAGCTTTTGGAATGAATGATGGCGAATTTCAACTGACAAAGCATGATCTTTCCTCTAAAGAACATGGAAAATATAGTGTTGACGAGAGGAAATGCATTTAG

Protein sequence

MTLLISKSCLVHGYVGHFQNKVLRNVSCCLCRMGEFLARRVRMYSYPPHRQFLLHTTLFSSSRKQQESSLHATHDQPPQRSVSAFLAANFEAEAFGMNDGEFQLTKHDLSSKEHGKYSVDERKCI
Homology
[Close]
BLAST of Spg010710 vs. NCBI nr
Match: XP_023550323.1 (oxysterol-binding protein-related protein 2A-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 61.2 bits (147), Expect = 7.2e-06
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 87  AANFEAEAFGMNDGEFQLTKHDLSSKEHGKYS 119
           AANFEAEA GMNDGEFQLTKHDLSS+E GKYS
Sbjct: 268 AANFEAEASGMNDGEFQLTKHDLSSEERGKYS 299

[Close]
BLAST of Spg010710 vs. NCBI nr
Match: XP_022922300.1 (oxysterol-binding protein-related protein 2A-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 61.2 bits (147), Expect = 7.2e-06
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 87  AANFEAEAFGMNDGEFQLTKHDLSSKEHGKYS 119
           AANFEAEA GMNDGEFQLTKHDLSS+E GKYS
Sbjct: 268 AANFEAEASGMNDGEFQLTKHDLSSEERGKYS 299

[Close]
BLAST of Spg010710 vs. NCBI nr
Match: KAG7016899.1 (Oxysterol-binding protein-related protein 2A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 61.2 bits (147), Expect = 7.2e-06
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 87  AANFEAEAFGMNDGEFQLTKHDLSSKEHGKYS 119
           AANFEAEA GMNDGEFQLTKHDLSS+E GKYS
Sbjct: 121 AANFEAEASGMNDGEFQLTKHDLSSEERGKYS 152

[Close]
BLAST of Spg010710 vs. NCBI nr
Match: XP_022922298.1 (oxysterol-binding protein-related protein 2A-like isoform X1 [Cucurbita moschata] >XP_022922299.1 oxysterol-binding protein-related protein 2A-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 61.2 bits (147), Expect = 7.2e-06
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 87  AANFEAEAFGMNDGEFQLTKHDLSSKEHGKYS 119
           AANFEAEA GMNDGEFQLTKHDLSS+E GKYS
Sbjct: 268 AANFEAEASGMNDGEFQLTKHDLSSEERGKYS 299

[Close]
BLAST of Spg010710 vs. NCBI nr
Match: KAG6579421.1 (Oxysterol-binding protein-related protein 2A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 61.2 bits (147), Expect = 7.2e-06
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 87  AANFEAEAFGMNDGEFQLTKHDLSSKEHGKYS 119
           AANFEAEA GMNDGEFQLTKHDLSS+E GKYS
Sbjct: 263 AANFEAEASGMNDGEFQLTKHDLSSEERGKYS 294

[Close]
BLAST of Spg010710 vs. ExPASy TrEMBL
Match: A0A6J1HXK4 (oxysterol-binding protein-related protein 2A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468951 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.5e-06
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 87  AANFEAEAFGMNDGEFQLTKHDLSSKEHGKYS 119
           AANFEAEA GMNDGEFQLTKHDLSS+E GKYS
Sbjct: 268 AANFEAEASGMNDGEFQLTKHDLSSEERGKYS 299

[Close]
BLAST of Spg010710 vs. ExPASy TrEMBL
Match: A0A6J1E666 (oxysterol-binding protein-related protein 2A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430320 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.5e-06
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 87  AANFEAEAFGMNDGEFQLTKHDLSSKEHGKYS 119
           AANFEAEA GMNDGEFQLTKHDLSS+E GKYS
Sbjct: 268 AANFEAEASGMNDGEFQLTKHDLSSEERGKYS 299

[Close]
BLAST of Spg010710 vs. ExPASy TrEMBL
Match: A0A6J1I3Y9 (oxysterol-binding protein-related protein 2A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468951 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.5e-06
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 87  AANFEAEAFGMNDGEFQLTKHDLSSKEHGKYS 119
           AANFEAEA GMNDGEFQLTKHDLSS+E GKYS
Sbjct: 268 AANFEAEASGMNDGEFQLTKHDLSSEERGKYS 299

[Close]
BLAST of Spg010710 vs. ExPASy TrEMBL
Match: A0A6J1E8B5 (oxysterol-binding protein-related protein 2A-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430320 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.5e-06
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 87  AANFEAEAFGMNDGEFQLTKHDLSSKEHGKYS 119
           AANFEAEA GMNDGEFQLTKHDLSS+E GKYS
Sbjct: 268 AANFEAEASGMNDGEFQLTKHDLSSEERGKYS 299

[Close]
BLAST of Spg010710 vs. ExPASy TrEMBL
Match: A0A1S3ATD7 (oxysterol-binding protein-related protein 2B-like OS=Cucumis melo OX=3656 GN=LOC103482633 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.9e-05
Identity = 27/32 (84.38%), Postives = 29/32 (90.62%), Query Frame = 0 

Query: 87  AANFEAEAFGMNDGEFQLTKHDLSSKEHGKYS 119
           AA+FEAEA G NDGEFQL KHDLSS+EHGKYS
Sbjct: 274 AASFEAEASGTNDGEFQLAKHDLSSEEHGKYS 305

The following BLAST results are available for this feature:
BLAST of Spg010710 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023550323.17.2e-0690.63oxysterol-binding protein-related protein 2A-like isoform X2 [Cucurbita pepo sub... [more]
XP_022922300.17.2e-0690.63oxysterol-binding protein-related protein 2A-like isoform X2 [Cucurbita moschata... [more]
KAG7016899.17.2e-0690.63Oxysterol-binding protein-related protein 2A [Cucurbita argyrosperma subsp. argy... [more]
XP_022922298.17.2e-0690.63oxysterol-binding protein-related protein 2A-like isoform X1 [Cucurbita moschata... [more]
KAG6579421.17.2e-0690.63Oxysterol-binding protein-related protein 2A, partial [Cucurbita argyrosperma su... [more]
BLAST of Spg010710 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg010710 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HXK43.5e-0690.63oxysterol-binding protein-related protein 2A-like isoform X1 OS=Cucurbita maxima... [more]
A0A6J1E6663.5e-0690.63oxysterol-binding protein-related protein 2A-like isoform X1 OS=Cucurbita moscha... [more]
A0A6J1I3Y93.5e-0690.63oxysterol-binding protein-related protein 2A-like isoform X2 OS=Cucurbita maxima... [more]
A0A6J1E8B53.5e-0690.63oxysterol-binding protein-related protein 2A-like isoform X2 OS=Cucurbita moscha... [more]
A0A1S3ATD72.9e-0584.38oxysterol-binding protein-related protein 2B-like OS=Cucumis melo OX=3656 GN=LOC... [more]
BLAST of Spg010710 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg010710.1Spg010710.1mRNA