Spg010709 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg010709
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Pentatricopeptide repeat-containing protein
Location	scaffold10: 7425553 .. 7427568 (-)
RNA-Seq Expression	Spg010709
Synteny	Spg010709

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAATTGCAATCAACTTCATCGTTTTCTTCCCCCATCCCCCTGTTCCTAATCGGAACAAAAAATTCCCCCAAAATTCGCCTCAACAAGATCAAACCAAACCCCAGAGCTCCAATTCCGACCTTCAGAGCCTCGGCCTCTTCAAAATCCAAAGACGTTTGGAGAAGAAAAACCCCATTTGAAAAATCCCCATCTCCCCAAAAGTACCAACGCGCTGCTAGAAAGCAAAGAGAGTCCTCTCATTTAGACCACAGCGTCGACATGGACGAGCTTTTAGCGTCAATTGGGCAAACGAAGAACGAGCAAGAGCTGTACTCGATTCTTTCGCCATACAAGGGCCGGCAGCTTTCAATGCGGTTCATGGTATCGATTCTGTCGCGAGAATCGGACTGGCAACGGTCCCTTGCGATTCTCGATTGGATCAACGAAGAGGCTCTTTACACTCCTTCGGTGTTCGCTTACAATGTTGTTCTGCGCAATGTGCTACGCGCTAAGCAGTGGGAACTTGCGCACGGACTGTTCGACGAAATGCGCCAAAGAGCTCTTGCGGCTGATAGGTATACTTATTCGACCCTTATCACTTATTTTGGCAAAGAGGGTATGTTTGATGCTGCCCTCTCTTGGTTACAGAAAATGGAGCAAGATCGTGTGACTGGGGACCTTGTTTTGTACAGTAATTTGATTGAGCTTTCTCGTAAACTCTGTGATTATTCGAAGGCTATTTCTATTTTTTCAAGATTGAAGAGATCTGGGATTACCCCTGATATTGTAGCCTATAATTCTATGATAAATGTGTTTGGGAAAGCTAAGCTTTTTAGAGAGGCTCGTTTTTTGTTGAAGGAGATGAGAGCTGTGGATGTTGTACCCGATACTGTTAGCTATTCGACTTTGCTGAGTATGTTTGTAGAGAATGAGAAGTTTTTGGAGGCACTCTCTGTGTTTTCTGAGATGACAGAGGTCAACTGCCCGCTTGATCTTACAACTTGTAATATTATGATTGATGTTTATGGTCAGTTGGATATGGTGAAGGAAGCCGACCGGCTGTTTTGGAGCATGAGGAAGATGGGAATTGAACCAAATGTTGTGAGTTACAATACAATTTTGAGGGTTTATGGTGAGGCTGAGCTTTTTGGGGAAGCGATTCACCTTTTTCGGTTGATGCAGAGAAAGGAGATTGAGCAGAATGTTGTGACGTATAACACCATGATCAAGATATATGGGAAGTCTTTGGAGCATGAAAAAGCAACAAATCTTGTGCAAGAGATGCAAAATAGAGGAATTGAACCGAATGCTATTACGTATTCGACGATAATTTCGATATGGGGGAAAGCGGGAAAGTTGGAGAGAGCTGCAATGTTGTTTCAGAAGCTGAGAAGCTCTGGGGCTGAGATTGATCAGGTCCTTTACCAAACTATGATTGTGGCCTATGAGAGGGCAGGCTTGGTTGCTCATGCCAAGCGTTTGCTTCATGAGCTAAGGCAACCGGACAATATTCCGAGGAAGACAGCAATTACCATTCTTGCTAGAGCTGGTCGAATCGAAGAAGCCACTTGGGTTTTCCGTCAGGCATTTGATGCAGGAGAGTTGAAGGACATATCTGTTTTCGGGTGCATGATTGATCTGTTTTCAAGGAACAAGAAGCACAAAAATGTTGTGGAGGTATTTGAGAAGATGAGAAGTGTGGGACATTTCCCCAACTCTAATGTCATTGCCCTTGTCCTAAACGCTTATGGGAAGTTGAGGGATTTTGACAATGCTGATGCTGTATATATGGAGATGCAAGAAGAGGGCTGTGTTTTTCCAGATGAAGTACACTTCCAGATGCTCAGTCTCTACGGTGCAAGAAAGGATTACAAGAGATTGGAGTCGTTGTTCGAAAGGCTCGACTCCGATCCCAATATCAATAAGAAGGAGTTGCATCTAGTCGTTGCCAGCATTTACGAAAGAGCTAATAGACTGAACGATGCATCTCGGATTATGAACAGGATGAACGAAATGGCGATATCAAGATCATGA

mRNA sequence

ATGCAATTGCAATCAACTTCATCGTTTTCTTCCCCCATCCCCCTGTTCCTAATCGGAACAAAAAATTCCCCCAAAATTCGCCTCAACAAGATCAAACCAAACCCCAGAGCTCCAATTCCGACCTTCAGAGCCTCGGCCTCTTCAAAATCCAAAGACGTTTGGAGAAGAAAAACCCCATTTGAAAAATCCCCATCTCCCCAAAAGTACCAACGCGCTGCTAGAAAGCAAAGAGAGTCCTCTCATTTAGACCACAGCGTCGACATGGACGAGCTTTTAGCGTCAATTGGGCAAACGAAGAACGAGCAAGAGCTGTACTCGATTCTTTCGCCATACAAGGGCCGGCAGCTTTCAATGCGGTTCATGGTATCGATTCTGTCGCGAGAATCGGACTGGCAACGGTCCCTTGCGATTCTCGATTGGATCAACGAAGAGGCTCTTTACACTCCTTCGGTGTTCGCTTACAATGTTGTTCTGCGCAATGTGCTACGCGCTAAGCAGTGGGAACTTGCGCACGGACTGTTCGACGAAATGCGCCAAAGAGCTCTTGCGGCTGATAGGTATACTTATTCGACCCTTATCACTTATTTTGGCAAAGAGGGTATGTTTGATGCTGCCCTCTCTTGGTTACAGAAAATGGAGCAAGATCGTGTGACTGGGGACCTTGTTTTGTACAGTAATTTGATTGAGCTTTCTCGTAAACTCTGTGATTATTCGAAGGCTATTTCTATTTTTTCAAGATTGAAGAGATCTGGGATTACCCCTGATATTGTAGCCTATAATTCTATGATAAATGTGTTTGGGAAAGCTAAGCTTTTTAGAGAGGCTCGTTTTTTGTTGAAGGAGATGAGAGCTGTGGATGTTGTACCCGATACTGTTAGCTATTCGACTTTGCTGAGTATGTTTGTAGAGAATGAGAAGTTTTTGGAGGCACTCTCTGTGTTTTCTGAGATGACAGAGGTCAACTGCCCGCTTGATCTTACAACTTGTAATATTATGATTGATGTTTATGGTCAGTTGGATATGGTGAAGGAAGCCGACCGGCTGTTTTGGAGCATGAGGAAGATGGGAATTGAACCAAATGTTGTGAGTTACAATACAATTTTGAGGGTTTATGGTGAGGCTGAGCTTTTTGGGGAAGCGATTCACCTTTTTCGGTTGATGCAGAGAAAGGAGATTGAGCAGAATGTTGTGACGTATAACACCATGATCAAGATATATGGGAAGTCTTTGGAGCATGAAAAAGCAACAAATCTTGTGCAAGAGATGCAAAATAGAGGAATTGAACCGAATGCTATTACGTATTCGACGATAATTTCGATATGGGGGAAAGCGGGAAAGTTGGAGAGAGCTGCAATGTTGTTTCAGAAGCTGAGAAGCTCTGGGGCTGAGATTGATCAGGTCCTTTACCAAACTATGATTGTGGCCTATGAGAGGGCAGGCTTGGTTGCTCATGCCAAGCGTTTGCTTCATGAGCTAAGGCAACCGGACAATATTCCGAGGAAGACAGCAATTACCATTCTTGCTAGAGCTGGTCGAATCGAAGAAGCCACTTGGGTTTTCCGTCAGGCATTTGATGCAGGAGAGTTGAAGGACATATCTGTTTTCGGGTGCATGATTGATCTGTTTTCAAGGAACAAGAAGCACAAAAATGTTGTGGAGGTATTTGAGAAGATGAGAAGTGTGGGACATTTCCCCAACTCTAATGTCATTGCCCTTGTCCTAAACGCTTATGGGAAGTTGAGGGATTTTGACAATGCTGATGCTGTATATATGGAGATGCAAGAAGAGGGCTGTGTTTTTCCAGATGAAGTACACTTCCAGATGCTCAGTCTCTACGGTGCAAGAAAGGATTACAAGAGATTGGAGTCGTTGTTCGAAAGGCTCGACTCCGATCCCAATATCAATAAGAAGGAGTTGCATCTAGTCGTTGCCAGCATTTACGAAAGAGCTAATAGACTGAACGATGCATCTCGGATTATGAACAGGATGAACGAAATGGCGATATCAAGATCATGA

Coding sequence (CDS)

ATGCAATTGCAATCAACTTCATCGTTTTCTTCCCCCATCCCCCTGTTCCTAATCGGAACAAAAAATTCCCCCAAAATTCGCCTCAACAAGATCAAACCAAACCCCAGAGCTCCAATTCCGACCTTCAGAGCCTCGGCCTCTTCAAAATCCAAAGACGTTTGGAGAAGAAAAACCCCATTTGAAAAATCCCCATCTCCCCAAAAGTACCAACGCGCTGCTAGAAAGCAAAGAGAGTCCTCTCATTTAGACCACAGCGTCGACATGGACGAGCTTTTAGCGTCAATTGGGCAAACGAAGAACGAGCAAGAGCTGTACTCGATTCTTTCGCCATACAAGGGCCGGCAGCTTTCAATGCGGTTCATGGTATCGATTCTGTCGCGAGAATCGGACTGGCAACGGTCCCTTGCGATTCTCGATTGGATCAACGAAGAGGCTCTTTACACTCCTTCGGTGTTCGCTTACAATGTTGTTCTGCGCAATGTGCTACGCGCTAAGCAGTGGGAACTTGCGCACGGACTGTTCGACGAAATGCGCCAAAGAGCTCTTGCGGCTGATAGGTATACTTATTCGACCCTTATCACTTATTTTGGCAAAGAGGGTATGTTTGATGCTGCCCTCTCTTGGTTACAGAAAATGGAGCAAGATCGTGTGACTGGGGACCTTGTTTTGTACAGTAATTTGATTGAGCTTTCTCGTAAACTCTGTGATTATTCGAAGGCTATTTCTATTTTTTCAAGATTGAAGAGATCTGGGATTACCCCTGATATTGTAGCCTATAATTCTATGATAAATGTGTTTGGGAAAGCTAAGCTTTTTAGAGAGGCTCGTTTTTTGTTGAAGGAGATGAGAGCTGTGGATGTTGTACCCGATACTGTTAGCTATTCGACTTTGCTGAGTATGTTTGTAGAGAATGAGAAGTTTTTGGAGGCACTCTCTGTGTTTTCTGAGATGACAGAGGTCAACTGCCCGCTTGATCTTACAACTTGTAATATTATGATTGATGTTTATGGTCAGTTGGATATGGTGAAGGAAGCCGACCGGCTGTTTTGGAGCATGAGGAAGATGGGAATTGAACCAAATGTTGTGAGTTACAATACAATTTTGAGGGTTTATGGTGAGGCTGAGCTTTTTGGGGAAGCGATTCACCTTTTTCGGTTGATGCAGAGAAAGGAGATTGAGCAGAATGTTGTGACGTATAACACCATGATCAAGATATATGGGAAGTCTTTGGAGCATGAAAAAGCAACAAATCTTGTGCAAGAGATGCAAAATAGAGGAATTGAACCGAATGCTATTACGTATTCGACGATAATTTCGATATGGGGGAAAGCGGGAAAGTTGGAGAGAGCTGCAATGTTGTTTCAGAAGCTGAGAAGCTCTGGGGCTGAGATTGATCAGGTCCTTTACCAAACTATGATTGTGGCCTATGAGAGGGCAGGCTTGGTTGCTCATGCCAAGCGTTTGCTTCATGAGCTAAGGCAACCGGACAATATTCCGAGGAAGACAGCAATTACCATTCTTGCTAGAGCTGGTCGAATCGAAGAAGCCACTTGGGTTTTCCGTCAGGCATTTGATGCAGGAGAGTTGAAGGACATATCTGTTTTCGGGTGCATGATTGATCTGTTTTCAAGGAACAAGAAGCACAAAAATGTTGTGGAGGTATTTGAGAAGATGAGAAGTGTGGGACATTTCCCCAACTCTAATGTCATTGCCCTTGTCCTAAACGCTTATGGGAAGTTGAGGGATTTTGACAATGCTGATGCTGTATATATGGAGATGCAAGAAGAGGGCTGTGTTTTTCCAGATGAAGTACACTTCCAGATGCTCAGTCTCTACGGTGCAAGAAAGGATTACAAGAGATTGGAGTCGTTGTTCGAAAGGCTCGACTCCGATCCCAATATCAATAAGAAGGAGTTGCATCTAGTCGTTGCCAGCATTTACGAAAGAGCTAATAGACTGAACGATGCATCTCGGATTATGAACAGGATGAACGAAATGGCGATATCAAGATCATGA

Protein sequence

MQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRAPIPTFRASASSKSKDVWRRKTPFEKSPSPQKYQRAARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQEEGCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLNDASRIMNRMNEMAISRS

Homology

[Close]

BLAST of Spg010709 vs. NCBI nr
Match: XP_008443439.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucumis melo] >KAA0053737.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK25666.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1239.9 bits (3207), Expect = 0.0e+00
Identity = 633/674 (93.92%), Postives = 654/674 (97.03%), Query Frame = 0


Query: 1   MQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRAPIPTFRASASSKSKDVWRRKTPF 60
           +QLQST SFSSPIPLFLI T++ PKIR NKIK  PR  IP FRAS+SS SKD+WRRKTP 
Sbjct: 6   IQLQSTLSFSSPIPLFLIETRDYPKIRFNKIKTKPRTRIPIFRASSSSASKDIWRRKTPS 65

Query: 61  EKSPS---PQKYQRAARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS 120
           EKS +   PQKYQR+AR+QRESSHLDHS+DMDELLASIGQTKNEQELYS+LSPYKGRQLS
Sbjct: 66  EKSTTTLLPQKYQRSARRQRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKGRQLS 125

Query: 121 MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM 180
           MRFMVS+LSRESDWQRSLAILDWINEEALYTPSV+AYNVVLRNVLRAKQWELAHGLFDEM
Sbjct: 126 MRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEM 185

Query: 181 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLCDY 240
           RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRV+GDLVLYSNLIELSRKLCDY
Sbjct: 186 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDY 245

Query: 241 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL 300
           SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV+PDTVSYSTL
Sbjct: 246 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTL 305

Query: 301 LSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI 360
           L+MFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFW MRKMGI
Sbjct: 306 LNMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKMGI 365

Query: 361 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 420
           EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN
Sbjct: 366 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 425

Query: 421 LVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYE 480
           LVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSS AEIDQVLYQTMIVAYE
Sbjct: 426 LVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSRAEIDQVLYQTMIVAYE 485

Query: 481 RAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGC 540
           +AGLVAHAKRLLHEL+QPDNIPRKTAITILA+AGRIEEATWVFRQAFDAGELKDISVFGC
Sbjct: 486 KAGLVAHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDISVFGC 545

Query: 541 MIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQEEG 600
           MIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFD ADAVYMEMQE+G
Sbjct: 546 MIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADAVYMEMQEKG 605

Query: 601 CVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLNDAS 660
           C+FPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYER NRLN+AS
Sbjct: 606 CIFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERGNRLNNAS 665

Query: 661 RIMNRMNEMAISRS 672
           RIMNRMNE AISRS
Sbjct: 666 RIMNRMNETAISRS 679

[Close]

BLAST of Spg010709 vs. NCBI nr
Match: XP_023521621.1 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023527980.1 pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1228.0 bits (3176), Expect = 0.0e+00
Identity = 632/674 (93.77%), Postives = 651/674 (96.59%), Query Frame = 0


Query: 1   MQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRAPIPTFRASASSKSKDVWRRKTPF 60
           MQLQSTSSFSSP+ L LI T+N+ K+ L++ K  PR  I   RAS+SS SKDVWRRKTP 
Sbjct: 12  MQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISVPRASSSSTSKDVWRRKTPS 71

Query: 61  EKS---PSPQKYQRAARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS 120
           EKS   P PQKY+R+AR+QRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS
Sbjct: 72  EKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS 131

Query: 121 MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM 180
           MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM
Sbjct: 132 MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM 191

Query: 181 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLCDY 240
           RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRV+GDLVLYSNLIELSRKLCDY
Sbjct: 192 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDY 251

Query: 241 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL 300
           SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL
Sbjct: 252 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL 311

Query: 301 LSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI 360
           LSMFVENEKFLEALSVFSEMTEVNCPL+LTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI
Sbjct: 312 LSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI 371

Query: 361 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 420
           EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN
Sbjct: 372 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 431

Query: 421 LVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYE 480
           L+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQVLYQTMIVAYE
Sbjct: 432 LIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVAYE 491

Query: 481 RAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGC 540
           RAGLVAHAKRL+ EL+QPDNIPRKTAITILARAGR+EEATWVFRQAFDAGELKDISVFGC
Sbjct: 492 RAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVFGC 551

Query: 541 MIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQEEG 600
           MIDLFSRNKKHKNVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFD ADAVY EMQEEG
Sbjct: 552 MIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYTEMQEEG 611

Query: 601 CVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLNDAS 660
           CVFPDEVHFQMLSLYGARKDYKRLE LFERLDSDPNINKKELHLVVASIYERANRLNDAS
Sbjct: 612 CVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVASIYERANRLNDAS 671

Query: 661 RIMNRMNEMAISRS 672
           RIMNRMNEM+ISRS
Sbjct: 672 RIMNRMNEMSISRS 685

[Close]

BLAST of Spg010709 vs. NCBI nr
Match: XP_022934402.1 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1225.3 bits (3169), Expect = 0.0e+00
Identity = 630/674 (93.47%), Postives = 651/674 (96.59%), Query Frame = 0


Query: 1   MQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRAPIPTFRASASSKSKDVWRRKTPF 60
           MQLQSTSSFSSP+ L LI T+N+ K+ L++ K  PR  I   RAS+SS SKD+WRRKT  
Sbjct: 11  MQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKTSS 70

Query: 61  EKS---PSPQKYQRAARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS 120
           EKS   P PQKY+R+AR+QRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS
Sbjct: 71  EKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS 130

Query: 121 MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM 180
           MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM
Sbjct: 131 MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM 190

Query: 181 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLCDY 240
           RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKM+QDRV+GDLVLYSNLIELSRKLCDY
Sbjct: 191 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMDQDRVSGDLVLYSNLIELSRKLCDY 250

Query: 241 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL 300
           SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL
Sbjct: 251 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL 310

Query: 301 LSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI 360
           LSMFVENEKFLEALSVFSEMTEVNCPL+LTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI
Sbjct: 311 LSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI 370

Query: 361 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 420
           EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN
Sbjct: 371 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 430

Query: 421 LVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYE 480
           L+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQVLYQTMIVAYE
Sbjct: 431 LIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVAYE 490

Query: 481 RAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGC 540
           RAGLVAHAKRL+ EL+QPDNIPRKTAITILARAGR+EEATWVFRQAFDAGELKDISVFGC
Sbjct: 491 RAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVFGC 550

Query: 541 MIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQEEG 600
           MIDLFSRNKKHKNVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFD ADAVYMEMQEEG
Sbjct: 551 MIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQEEG 610

Query: 601 CVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLNDAS 660
           CVFPDEVHFQMLSLYGARKDYKRLE LFERLDSDPNINKKELHLVVASIYERANRLNDAS
Sbjct: 611 CVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVASIYERANRLNDAS 670

Query: 661 RIMNRMNEMAISRS 672
           RIMNRMNEM+ISRS
Sbjct: 671 RIMNRMNEMSISRS 684

[Close]

BLAST of Spg010709 vs. NCBI nr
Match: KAG7017725.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1223.8 bits (3165), Expect = 0.0e+00
Identity = 629/674 (93.32%), Postives = 650/674 (96.44%), Query Frame = 0


Query: 1   MQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRAPIPTFRASASSKSKDVWRRKTPF 60
           MQLQSTSSFSSP+ L LI T+N+ K+ L++ K  PR  I   RAS+SS SKD+WRRKTP 
Sbjct: 1   MQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKTPS 60

Query: 61  EKS---PSPQKYQRAARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS 120
           EKS   P PQKY+R+AR+QRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS
Sbjct: 61  EKSTATPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS 120

Query: 121 MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM 180
           MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM
Sbjct: 121 MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM 180

Query: 181 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLCDY 240
           RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRV+GDLVLYSNLIELSRKLCDY
Sbjct: 181 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDY 240

Query: 241 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL 300
           SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL
Sbjct: 241 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL 300

Query: 301 LSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI 360
           LSMFVENEKFLEALSVFSEMTEVNCPL+LTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI
Sbjct: 301 LSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI 360

Query: 361 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 420
           EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN
Sbjct: 361 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 420

Query: 421 LVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYE 480
           L+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQVLYQTMIVAYE
Sbjct: 421 LIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVAYE 480

Query: 481 RAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGC 540
           RAGLVAHAKRL+ EL+QPDNIPRKTAITILARAGR+EE+TWVFRQAFDAGELKDISVFGC
Sbjct: 481 RAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEESTWVFRQAFDAGELKDISVFGC 540

Query: 541 MIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQEEG 600
           MIDLFSRNKKHKNVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFD ADAVYMEMQEEG
Sbjct: 541 MIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQEEG 600

Query: 601 CVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLNDAS 660
           CVFPDEVHFQMLSLY ARKDYKRLE  FERLDSDPNINKKELHLVVASIYERANRLNDAS
Sbjct: 601 CVFPDEVHFQMLSLYSARKDYKRLEESFERLDSDPNINKKELHLVVASIYERANRLNDAS 660

Query: 661 RIMNRMNEMAISRS 672
           RIMNRMNEM+ISRS
Sbjct: 661 RIMNRMNEMSISRS 674

[Close]

BLAST of Spg010709 vs. NCBI nr
Match: KAG6580983.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1223.8 bits (3165), Expect = 0.0e+00
Identity = 629/674 (93.32%), Postives = 650/674 (96.44%), Query Frame = 0


Query: 1   MQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRAPIPTFRASASSKSKDVWRRKTPF 60
           MQLQSTSSFSSP+ L LI T+N+ K+ L++ K  PR  I   RAS+SS SKD+WRRKTP 
Sbjct: 11  MQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKTPS 70

Query: 61  EKS---PSPQKYQRAARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS 120
           EKS   P PQKY+R+AR+QRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS
Sbjct: 71  EKSTATPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS 130

Query: 121 MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM 180
           MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM
Sbjct: 131 MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM 190

Query: 181 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLCDY 240
           RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRV+GDLVLYSNLIELSRKLCDY
Sbjct: 191 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDY 250

Query: 241 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL 300
           SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL
Sbjct: 251 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL 310

Query: 301 LSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI 360
           LSMFVENEKFLEALSVFSEMTEVNCPL+LTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI
Sbjct: 311 LSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI 370

Query: 361 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 420
           EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN
Sbjct: 371 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 430

Query: 421 LVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYE 480
           L+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQVLYQTMIVAYE
Sbjct: 431 LIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVAYE 490

Query: 481 RAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGC 540
           RAGLVAHAKRL+ EL+QPDNIPRKTAITILARAGR+EE+TWVFRQAFDAGELKDISVFGC
Sbjct: 491 RAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEESTWVFRQAFDAGELKDISVFGC 550

Query: 541 MIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQEEG 600
           MIDLFSRNKKHKNVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFD ADAVYMEMQEEG
Sbjct: 551 MIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQEEG 610

Query: 601 CVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLNDAS 660
           CVFPDEVHFQMLSLY ARKDYKRLE  FERLDSDPNINKKELHLVVASIYERANRLNDAS
Sbjct: 611 CVFPDEVHFQMLSLYSARKDYKRLEESFERLDSDPNINKKELHLVVASIYERANRLNDAS 670

Query: 661 RIMNRMNEMAISRS 672
           RIMNRMNEM+ISRS
Sbjct: 671 RIMNRMNEMSISRS 684

[Close]

BLAST of Spg010709 vs. ExPASy Swiss-Prot
Match: Q9FLD8 (Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g39980 PE=2 SV=1)

HSP 1 Score: 1008.1 bits (2605), Expect = 4.8e-293
Identity = 518/672 (77.08%), Postives = 596/672 (88.69%), Query Frame = 0


Query: 1   MQLQSTSSFSSPIPLFLIGTKNSPKIRLNKI-KPNPRAPIPTFRASASSKS---KDVWRR 60
           +++ S+SS S P+ L L        I  + I +   R  I T  AS+SS+S   K VW R
Sbjct: 3   IEIASSSSLSLPL-LPLTRPHIYTSIPFSTIPEARQRNLIFTVSASSSSESTQNKKVW-R 62

Query: 61  KTPFEKSPSPQKYQRAARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQL 120
           K P + + S  +  R  R+ + S+ LDH+VDMDELLASI QT+NE+EL+S+LS YK RQL
Sbjct: 63  KQPEKNTTSSFQALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQL 122

Query: 121 SMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDE 180
           S+RFMVS+LSRE+DWQRSLA+LDW++EEA YTPSVFAYNVVLRNVLRAKQ+++AHGLFDE
Sbjct: 123 SIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDE 182

Query: 181 MRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLCD 240
           MRQRALA DRYTYSTLIT FGKEGMFD+ALSWLQKMEQDRV+GDLVLYSNLIELSR+LCD
Sbjct: 183 MRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCD 242

Query: 241 YSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYST 300
           YSKAISIFSRLKRSGITPD+VAYNSMINV+GKAKLFREAR L+KEM    V+P+TVSYST
Sbjct: 243 YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYST 302

Query: 301 LLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMG 360
           LLS++VEN KFLEALSVF+EM EVNC LDLTTCNIMIDVYGQLDMVKEADRLFWS+RKM 
Sbjct: 303 LLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMD 362

Query: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 420
           IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK+IEQNVVTYNTMIKIYGK++EHEKAT
Sbjct: 363 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 422

Query: 421 NLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAY 480
           NLVQEMQ+RGIEPNAITYSTIISIWGKAGKL+RAA LFQKLRSSG EIDQVLYQTMIVAY
Sbjct: 423 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 482

Query: 481 ERAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFG 540
           ER GL+ HAKRLLHEL+ PDNIPR+TAITILA+AGR EEATWVFRQAF++GE+KDISVFG
Sbjct: 483 ERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFG 542

Query: 541 CMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQEE 600
           CMI+L+SRN+++ NV+EVFEKMR+ G+FP+SNVIA+VLNAYGK R+F+ AD VY EMQEE
Sbjct: 543 CMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEE 602

Query: 601 GCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLNDA 660
           GCVFPDEVHFQMLSLY ++KD++ +ESLF+RL+SDPN+N KELHLVVA++YERA++LNDA
Sbjct: 603 GCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDA 662

Query: 661 SRIMNRMNEMAI 669
           SR+MNRM E  I
Sbjct: 663 SRVMNRMRERGI 672

[Close]

BLAST of Spg010709 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 206.8 bits (525), Expect = 7.4e-52
Identity = 132/436 (30.28%), Postives = 231/436 (52.98%), Query Frame = 0


Query: 147 YTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAAL 206
           Y P+   +N ++  +    +   A  L D M  R    D +TY T++    K G  D AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 207 SWLQKMEQDRVTGDLVLYSNLIELSRKLCDY---SKAISIFSRLKRSGITPDIVAYNSMI 266
           S L+KME+ ++  D+V+Y+ +I+    LC+Y   + A+++F+ +   GI P++V YNS+I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIID---ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 300

Query: 267 NVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCP 326
                   + +A  LL +M    + P+ V++S L+  FV+  K +EA  ++ EM + +  
Sbjct: 301 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 327 LDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHL 386
            D+ T + +I+ +   D + EA  +F  M      PNVV+YNT+++ + +A+   E + L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 420

Query: 387 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGK 446
           FR M ++ +  N VTYNT+I+   ++ + + A  + ++M + G+ P+ ITYS ++    K
Sbjct: 421 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 480

Query: 447 AGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLLHELR----QPDNIP 506
            GKLE+A ++F+ L+ S  E D   Y  MI    +AG V     L   L     +P+ I 
Sbjct: 481 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 540

Query: 507 RKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKKHKNVVEVFEKMR 566
             T I+   R G  EEA  +FR+  + G L +   +  +I    R+       E+ ++MR
Sbjct: 541 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 600

Query: 567 SVGHFPNSNVIALVLN 576
           S G   +++ I++V+N
Sbjct: 601 SCGFVGDASTISMVIN 613

[Close]

BLAST of Spg010709 vs. ExPASy Swiss-Prot
Match: Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 8.2e-51
Identity = 130/571 (22.77%), Postives = 266/571 (46.58%), Query Frame = 0


Query: 84  HSVDMDELLASIGQTKNEQELYSILSPYKGRQLSMRFMVSILSR---ESDWQRSLAILDW 143
           +S D++ L+  +        +   L  +K + LS+     +        DWQRSL +  +
Sbjct: 72  YSYDVESLINKLSSLPPRGSIARCLDIFKNK-LSLNDFALVFKEFAGRGDWQRSLRLFKY 131

Query: 144 INEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEG 203
           +  +    P+   Y +++  + R    +    +FDEM  + ++   ++Y+ LI  +G+ G
Sbjct: 132 MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNG 191

Query: 204 MFDAALSWLQKMEQDRVTGDLVLYSNLIE-LSRKLCDYSKAISIFSRLKRSGITPDIVAY 263
            ++ +L  L +M+ ++++  ++ Y+ +I   +R   D+   + +F+ ++  GI PDIV Y
Sbjct: 192 RYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 251

Query: 264 NSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTE 323
           N++++      L  EA  + + M    +VPD  +YS L+  F +  +  +   +  EM  
Sbjct: 252 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 311

Query: 324 VNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGE 383
                D+T+ N++++ Y +   +KEA  +F  M+  G  PN  +Y+ +L ++G++  + +
Sbjct: 312 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 371

Query: 384 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIIS 443
              LF  M+    + +  TYN +I+++G+    ++   L  +M    IEP+  TY  II 
Sbjct: 372 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 431

Query: 444 IWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAK---RLLHELRQPD 503
             GK G  E A  + Q + ++        Y  +I A+ +A L   A      +HE+    
Sbjct: 432 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNP 491

Query: 504 NIPR-KTAITILARAGRIEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKKHKNVVEVF 563
           +I    + +   AR G ++E+  +  +  D+G  ++   F   I+ + +  K +  V+ +
Sbjct: 492 SIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 551

Query: 564 EKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQEEGCVFPDEVHFQMLSLYGAR 623
             M      P+   +  VL+ Y   R  D     + EM+    +     +  ML++YG  
Sbjct: 552 VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKT 611

Query: 624 KDYKRLESLFERLDSDPNINKKELHLVVASI 647
           + +  +  L E + S+   N   +H V+  +
Sbjct: 612 ERWDDVNELLEEMLSNRVSN---IHQVIGQM 638

[Close]

BLAST of Spg010709 vs. ExPASy Swiss-Prot
Match: Q9LS88 (Pentatricopeptide repeat-containing protein At3g23020 OS=Arabidopsis thaliana OX=3702 GN=At3g23020 PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.4e-50
Identity = 148/613 (24.14%), Postives = 283/613 (46.17%), Query Frame = 0


Query: 102 QELYSILSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNV 161
           +++   LSP+  R LS +    IL  +  W+R++ I +W   +  Y  +V  YN++LR +
Sbjct: 139 EDVEDALSPWAER-LSNKERTIILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRIL 198

Query: 162 LRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDL 221
            +A +W     L+DEM ++ +     TY TLI  + K G+   AL WL KM +  +  D 
Sbjct: 199 GKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDE 258

Query: 222 VLYSNLIELSRKLCDYSKAISIFSRLK------RSGITPDIVAYNSMINVFGKAKLFREA 281
           V    ++++ +K  ++ KA   F +         S +      YN+MI+ +GK+   +EA
Sbjct: 259 VTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEA 318

Query: 282 RFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDV 341
               K M    +VP TV+++T++ ++  N +  E  S+   M +++C  D  T NI+I +
Sbjct: 319 SETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISL 378

Query: 342 YGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQN 401
           + + + ++ A   F  M+  G++P+ VSY T+L  +    +  EA  L   M    +E +
Sbjct: 379 HTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEID 438

Query: 402 VVTYNTMIKIY------GKSLEHEKATNLVQEMQNRGIEPN------------------- 461
             T + + ++Y       KS    K  ++   M + G   N                   
Sbjct: 439 EYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFIC 498

Query: 462 --------AITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLV 521
                    I Y+ +I  +G +   E+A  LF+ + S G   D+  Y T++     A + 
Sbjct: 499 CQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMP 558

Query: 522 AHAKRLLHELRQ----PDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGCM 581
              +  L ++R+     D IP    I+   + G++  A  V+++  +     D+ V+G +
Sbjct: 559 HKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVL 618

Query: 582 IDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQE--E 641
           I+ F+     +  +   E M+  G   NS +   ++  Y K+   D A+A+Y ++ +   
Sbjct: 619 INAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCN 678

Query: 642 GCVFPDEVHFQ-MLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLND 669
              +PD      M++LY  R   ++ E++F+ +      N+    +++  +Y++  R  +
Sbjct: 679 KTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLC-MYKKNGRFEE 738

[Close]

BLAST of Spg010709 vs. ExPASy Swiss-Prot
Match: Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 2.6e-49
Identity = 128/446 (28.70%), Postives = 230/446 (51.57%), Query Frame = 0


Query: 134 SLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLI 193
           ++A++D + E   Y P  F +  ++  +    +   A  L D+M QR    D  TY T++
Sbjct: 172 AVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 231

Query: 194 TYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGIT 253
               K G  D ALS L+KME+ ++  D+V+Y+ +I+   K      A+++F+ +   GI 
Sbjct: 232 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 291

Query: 254 PDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSV 313
           PD+  Y+S+I+       + +A  LL +M    + P+ V++S L+  FV+  K +EA  +
Sbjct: 292 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 351

Query: 314 FSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGE 373
           + EM + +   D+ T + +I+ +   D + EA  +F  M      PNVV+Y+T+++ + +
Sbjct: 352 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 411

Query: 374 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAIT 433
           A+   E + LFR M ++ +  N VTY T+I  + ++ + + A  + ++M + G+ PN +T
Sbjct: 412 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 471

Query: 434 YSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLLHELR 493
           Y+ ++    K GKL +A ++F+ L+ S  E D   Y  MI    +AG V     L   L 
Sbjct: 472 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 531

Query: 494 ----QPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKKHK 553
                P+ I   T I+   R G  EEA  + ++  + G L +   +  +I    R+   +
Sbjct: 532 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 591

Query: 554 NVVEVFEKMRSVGHFPNSNVIALVLN 576
              E+ ++MRS G   +++ I LV N
Sbjct: 592 ASAELIKEMRSCGFAGDASTIGLVTN 616

[Close]

BLAST of Spg010709 vs. ExPASy TrEMBL
Match: A0A5A7UGV7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008300 PE=4 SV=1)

HSP 1 Score: 1239.9 bits (3207), Expect = 0.0e+00
Identity = 633/674 (93.92%), Postives = 654/674 (97.03%), Query Frame = 0


Query: 1   MQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRAPIPTFRASASSKSKDVWRRKTPF 60
           +QLQST SFSSPIPLFLI T++ PKIR NKIK  PR  IP FRAS+SS SKD+WRRKTP 
Sbjct: 6   IQLQSTLSFSSPIPLFLIETRDYPKIRFNKIKTKPRTRIPIFRASSSSASKDIWRRKTPS 65

Query: 61  EKSPS---PQKYQRAARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS 120
           EKS +   PQKYQR+AR+QRESSHLDHS+DMDELLASIGQTKNEQELYS+LSPYKGRQLS
Sbjct: 66  EKSTTTLLPQKYQRSARRQRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKGRQLS 125

Query: 121 MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM 180
           MRFMVS+LSRESDWQRSLAILDWINEEALYTPSV+AYNVVLRNVLRAKQWELAHGLFDEM
Sbjct: 126 MRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEM 185

Query: 181 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLCDY 240
           RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRV+GDLVLYSNLIELSRKLCDY
Sbjct: 186 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDY 245

Query: 241 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL 300
           SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV+PDTVSYSTL
Sbjct: 246 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTL 305

Query: 301 LSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI 360
           L+MFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFW MRKMGI
Sbjct: 306 LNMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKMGI 365

Query: 361 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 420
           EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN
Sbjct: 366 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 425

Query: 421 LVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYE 480
           LVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSS AEIDQVLYQTMIVAYE
Sbjct: 426 LVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSRAEIDQVLYQTMIVAYE 485

Query: 481 RAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGC 540
           +AGLVAHAKRLLHEL+QPDNIPRKTAITILA+AGRIEEATWVFRQAFDAGELKDISVFGC
Sbjct: 486 KAGLVAHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDISVFGC 545

Query: 541 MIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQEEG 600
           MIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFD ADAVYMEMQE+G
Sbjct: 546 MIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADAVYMEMQEKG 605

Query: 601 CVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLNDAS 660
           C+FPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYER NRLN+AS
Sbjct: 606 CIFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERGNRLNNAS 665

Query: 661 RIMNRMNEMAISRS 672
           RIMNRMNE AISRS
Sbjct: 666 RIMNRMNETAISRS 679

[Close]

BLAST of Spg010709 vs. ExPASy TrEMBL
Match: A0A1S3B8T9 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487030 PE=4 SV=1)

HSP 1 Score: 1239.9 bits (3207), Expect = 0.0e+00
Identity = 633/674 (93.92%), Postives = 654/674 (97.03%), Query Frame = 0


Query: 1   MQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRAPIPTFRASASSKSKDVWRRKTPF 60
           +QLQST SFSSPIPLFLI T++ PKIR NKIK  PR  IP FRAS+SS SKD+WRRKTP 
Sbjct: 6   IQLQSTLSFSSPIPLFLIETRDYPKIRFNKIKTKPRTRIPIFRASSSSASKDIWRRKTPS 65

Query: 61  EKSPS---PQKYQRAARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS 120
           EKS +   PQKYQR+AR+QRESSHLDHS+DMDELLASIGQTKNEQELYS+LSPYKGRQLS
Sbjct: 66  EKSTTTLLPQKYQRSARRQRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKGRQLS 125

Query: 121 MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM 180
           MRFMVS+LSRESDWQRSLAILDWINEEALYTPSV+AYNVVLRNVLRAKQWELAHGLFDEM
Sbjct: 126 MRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEM 185

Query: 181 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLCDY 240
           RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRV+GDLVLYSNLIELSRKLCDY
Sbjct: 186 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDY 245

Query: 241 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL 300
           SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV+PDTVSYSTL
Sbjct: 246 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTL 305

Query: 301 LSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI 360
           L+MFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFW MRKMGI
Sbjct: 306 LNMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKMGI 365

Query: 361 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 420
           EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN
Sbjct: 366 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 425

Query: 421 LVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYE 480
           LVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSS AEIDQVLYQTMIVAYE
Sbjct: 426 LVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSRAEIDQVLYQTMIVAYE 485

Query: 481 RAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGC 540
           +AGLVAHAKRLLHEL+QPDNIPRKTAITILA+AGRIEEATWVFRQAFDAGELKDISVFGC
Sbjct: 486 KAGLVAHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDISVFGC 545

Query: 541 MIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQEEG 600
           MIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFD ADAVYMEMQE+G
Sbjct: 546 MIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADAVYMEMQEKG 605

Query: 601 CVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLNDAS 660
           C+FPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYER NRLN+AS
Sbjct: 606 CIFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERGNRLNNAS 665

Query: 661 RIMNRMNEMAISRS 672
           RIMNRMNE AISRS
Sbjct: 666 RIMNRMNETAISRS 679

[Close]

BLAST of Spg010709 vs. ExPASy TrEMBL
Match: A0A6J1F2M9 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441589 PE=4 SV=1)

HSP 1 Score: 1225.3 bits (3169), Expect = 0.0e+00
Identity = 630/674 (93.47%), Postives = 651/674 (96.59%), Query Frame = 0


Query: 1   MQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRAPIPTFRASASSKSKDVWRRKTPF 60
           MQLQSTSSFSSP+ L LI T+N+ K+ L++ K  PR  I   RAS+SS SKD+WRRKT  
Sbjct: 11  MQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKTSS 70

Query: 61  EKS---PSPQKYQRAARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS 120
           EKS   P PQKY+R+AR+QRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS
Sbjct: 71  EKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS 130

Query: 121 MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM 180
           MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM
Sbjct: 131 MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM 190

Query: 181 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLCDY 240
           RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKM+QDRV+GDLVLYSNLIELSRKLCDY
Sbjct: 191 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMDQDRVSGDLVLYSNLIELSRKLCDY 250

Query: 241 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL 300
           SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL
Sbjct: 251 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL 310

Query: 301 LSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI 360
           LSMFVENEKFLEALSVFSEMTEVNCPL+LTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI
Sbjct: 311 LSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI 370

Query: 361 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 420
           EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN
Sbjct: 371 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 430

Query: 421 LVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYE 480
           L+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQVLYQTMIVAYE
Sbjct: 431 LIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVAYE 490

Query: 481 RAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGC 540
           RAGLVAHAKRL+ EL+QPDNIPRKTAITILARAGR+EEATWVFRQAFDAGELKDISVFGC
Sbjct: 491 RAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVFGC 550

Query: 541 MIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQEEG 600
           MIDLFSRNKKHKNVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFD ADAVYMEMQEEG
Sbjct: 551 MIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQEEG 610

Query: 601 CVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLNDAS 660
           CVFPDEVHFQMLSLYGARKDYKRLE LFERLDSDPNINKKELHLVVASIYERANRLNDAS
Sbjct: 611 CVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVASIYERANRLNDAS 670

Query: 661 RIMNRMNEMAISRS 672
           RIMNRMNEM+ISRS
Sbjct: 671 RIMNRMNEMSISRS 684

[Close]

BLAST of Spg010709 vs. ExPASy TrEMBL
Match: A0A6J1J8J4 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482255 PE=4 SV=1)

HSP 1 Score: 1222.2 bits (3161), Expect = 0.0e+00
Identity = 628/674 (93.18%), Postives = 650/674 (96.44%), Query Frame = 0


Query: 1   MQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRAPIPTFRASASSKSKDVWRRKTPF 60
           MQLQSTSSFSSP+ L L  T+N+ K+ L++ K  PR  I   RAS+SS SKD+WRRKTP 
Sbjct: 11  MQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKTPS 70

Query: 61  EKS---PSPQKYQRAARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS 120
           EKS   P PQKY+R+AR+QRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS
Sbjct: 71  EKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS 130

Query: 121 MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM 180
           MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM
Sbjct: 131 MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM 190

Query: 181 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLCDY 240
           RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRV+GDLVLYSNLIELSRKLCDY
Sbjct: 191 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDY 250

Query: 241 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL 300
           SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL
Sbjct: 251 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL 310

Query: 301 LSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI 360
           LSMFVENEKFLEALSVFSEMTEVNCPL+LTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI
Sbjct: 311 LSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI 370

Query: 361 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 420
           EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN
Sbjct: 371 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 430

Query: 421 LVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYE 480
           L+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQVLYQTMIVAYE
Sbjct: 431 LIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVAYE 490

Query: 481 RAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGC 540
           RAGLVAHAKRL+ EL+QPDNIPRKTAITILARAGR+EEATWVFRQAFDAGELKDISVFGC
Sbjct: 491 RAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVFGC 550

Query: 541 MIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQEEG 600
           MIDLFSRNK+HKNVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFD ADAVYMEMQE+G
Sbjct: 551 MIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQEQG 610

Query: 601 CVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLNDAS 660
           CVFPDEVHFQMLSLYGARKDYKRLE LFERLDSDPNINKKELHLVVA IYERANRLNDAS
Sbjct: 611 CVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIYERANRLNDAS 670

Query: 661 RIMNRMNEMAISRS 672
           RIMNRMNEM+ISRS
Sbjct: 671 RIMNRMNEMSISRS 684

[Close]

BLAST of Spg010709 vs. ExPASy TrEMBL
Match: A0A6J1DYU7 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111024318 PE=4 SV=1)

HSP 1 Score: 1218.4 bits (3151), Expect = 0.0e+00
Identity = 623/674 (92.43%), Postives = 645/674 (95.70%), Query Frame = 0


Query: 1   MQLQSTSSFSSPIPLFLIGTKNSPKIRLNKIKPNPRAPIPTFRASASSKSKDVWRRKTP- 60
           MQL+STS FSS IPLFL+GT+N   IRLNKIK  P  PI   RASASSKSKDVWRR+TP 
Sbjct: 11  MQLESTSPFSSAIPLFLLGTRNHAPIRLNKIKRKPTTPIIILRASASSKSKDVWRRRTPS 70

Query: 61  --FEKSPSPQKYQRAARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS 120
                SP PQKYQR+AR+QRE  HLDHSVDMDELL+SIGQTKNEQELYS+LSPYKGRQLS
Sbjct: 71  GDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSVLSPYKGRQLS 130

Query: 121 MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM 180
           +RFMVS+LSRE DWQRSLAILDW+NEEALYTPSVFAYNVV+RNVLRAKQWE+AHGLFDEM
Sbjct: 131 IRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIAHGLFDEM 190

Query: 181 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLCDY 240
           RQRALAADRYTYSTLIT FGKEG+FDAAL WLQ+MEQDRV+GDLVLYSNLIELSRKLCDY
Sbjct: 191 RQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIELSRKLCDY 250

Query: 241 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL 300
           SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAV VVPDTVSYSTL
Sbjct: 251 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPDTVSYSTL 310

Query: 301 LSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI 360
           LSMFVENEKFLEALSV+SEM EVNCPLDLTTCN+MIDVYGQLDMVKEADRLFWSMRKMGI
Sbjct: 311 LSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKMGI 370

Query: 361 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 420
           EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN
Sbjct: 371 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 430

Query: 421 LVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYE 480
           LVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYE
Sbjct: 431 LVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYE 490

Query: 481 RAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGC 540
           RAGLVAHAKRLLHEL+QPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDIS+FGC
Sbjct: 491 RAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISIFGC 550

Query: 541 MIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQEEG 600
           MIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFD ADAVYMEMQEEG
Sbjct: 551 MIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVYMEMQEEG 610

Query: 601 CVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLNDAS 660
           CVF DEVHFQML LYGARKDYKRL+SLFERLDSDPNINKKELHLVVASIYERANRLNDAS
Sbjct: 611 CVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIYERANRLNDAS 670

Query: 661 RIMNRMNEMAISRS 672
           RIM+RMNEMAISRS
Sbjct: 671 RIMSRMNEMAISRS 684

[Close]

BLAST of Spg010709 vs. TAIR 10
Match: AT5G39980.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 1008.1 bits (2605), Expect = 3.4e-294
Identity = 518/672 (77.08%), Postives = 596/672 (88.69%), Query Frame = 0


Query: 1   MQLQSTSSFSSPIPLFLIGTKNSPKIRLNKI-KPNPRAPIPTFRASASSKS---KDVWRR 60
           +++ S+SS S P+ L L        I  + I +   R  I T  AS+SS+S   K VW R
Sbjct: 3   IEIASSSSLSLPL-LPLTRPHIYTSIPFSTIPEARQRNLIFTVSASSSSESTQNKKVW-R 62

Query: 61  KTPFEKSPSPQKYQRAARKQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQL 120
           K P + + S  +  R  R+ + S+ LDH+VDMDELLASI QT+NE+EL+S+LS YK RQL
Sbjct: 63  KQPEKNTTSSFQALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQL 122

Query: 121 SMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDE 180
           S+RFMVS+LSRE+DWQRSLA+LDW++EEA YTPSVFAYNVVLRNVLRAKQ+++AHGLFDE
Sbjct: 123 SIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDE 182

Query: 181 MRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLCD 240
           MRQRALA DRYTYSTLIT FGKEGMFD+ALSWLQKMEQDRV+GDLVLYSNLIELSR+LCD
Sbjct: 183 MRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCD 242

Query: 241 YSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYST 300
           YSKAISIFSRLKRSGITPD+VAYNSMINV+GKAKLFREAR L+KEM    V+P+TVSYST
Sbjct: 243 YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYST 302

Query: 301 LLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMG 360
           LLS++VEN KFLEALSVF+EM EVNC LDLTTCNIMIDVYGQLDMVKEADRLFWS+RKM 
Sbjct: 303 LLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMD 362

Query: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKAT 420
           IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK+IEQNVVTYNTMIKIYGK++EHEKAT
Sbjct: 363 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 422

Query: 421 NLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAY 480
           NLVQEMQ+RGIEPNAITYSTIISIWGKAGKL+RAA LFQKLRSSG EIDQVLYQTMIVAY
Sbjct: 423 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 482

Query: 481 ERAGLVAHAKRLLHELRQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFG 540
           ER GL+ HAKRLLHEL+ PDNIPR+TAITILA+AGR EEATWVFRQAF++GE+KDISVFG
Sbjct: 483 ERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFG 542

Query: 541 CMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQEE 600
           CMI+L+SRN+++ NV+EVFEKMR+ G+FP+SNVIA+VLNAYGK R+F+ AD VY EMQEE
Sbjct: 543 CMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEE 602

Query: 601 GCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLNDA 660
           GCVFPDEVHFQMLSLY ++KD++ +ESLF+RL+SDPN+N KELHLVVA++YERA++LNDA
Sbjct: 603 GCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDA 662

Query: 661 SRIMNRMNEMAI 669
           SR+MNRM E  I
Sbjct: 663 SRVMNRMRERGI 672

[Close]

BLAST of Spg010709 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 206.8 bits (525), Expect = 5.3e-53
Identity = 132/436 (30.28%), Postives = 231/436 (52.98%), Query Frame = 0


Query: 147 YTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAAL 206
           Y P+   +N ++  +    +   A  L D M  R    D +TY T++    K G  D AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 207 SWLQKMEQDRVTGDLVLYSNLIELSRKLCDY---SKAISIFSRLKRSGITPDIVAYNSMI 266
           S L+KME+ ++  D+V+Y+ +I+    LC+Y   + A+++F+ +   GI P++V YNS+I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIID---ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 300

Query: 267 NVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCP 326
                   + +A  LL +M    + P+ V++S L+  FV+  K +EA  ++ EM + +  
Sbjct: 301 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 327 LDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHL 386
            D+ T + +I+ +   D + EA  +F  M      PNVV+YNT+++ + +A+   E + L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 420

Query: 387 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWGK 446
           FR M ++ +  N VTYNT+I+   ++ + + A  + ++M + G+ P+ ITYS ++    K
Sbjct: 421 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 480

Query: 447 AGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLLHELR----QPDNIP 506
            GKLE+A ++F+ L+ S  E D   Y  MI    +AG V     L   L     +P+ I 
Sbjct: 481 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 540

Query: 507 RKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKKHKNVVEVFEKMR 566
             T I+   R G  EEA  +FR+  + G L +   +  +I    R+       E+ ++MR
Sbjct: 541 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 600

Query: 567 SVGHFPNSNVIALVLN 576
           S G   +++ I++V+N
Sbjct: 601 SCGFVGDASTISMVIN 613

[Close]

BLAST of Spg010709 vs. TAIR 10
Match: AT1G74850.1 (plastid transcriptionally active 2 )

HSP 1 Score: 203.4 bits (516), Expect = 5.8e-52
Identity = 130/571 (22.77%), Postives = 266/571 (46.58%), Query Frame = 0


Query: 84  HSVDMDELLASIGQTKNEQELYSILSPYKGRQLSMRFMVSILSR---ESDWQRSLAILDW 143
           +S D++ L+  +        +   L  +K + LS+     +        DWQRSL +  +
Sbjct: 72  YSYDVESLINKLSSLPPRGSIARCLDIFKNK-LSLNDFALVFKEFAGRGDWQRSLRLFKY 131

Query: 144 INEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEG 203
           +  +    P+   Y +++  + R    +    +FDEM  + ++   ++Y+ LI  +G+ G
Sbjct: 132 MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNG 191

Query: 204 MFDAALSWLQKMEQDRVTGDLVLYSNLIE-LSRKLCDYSKAISIFSRLKRSGITPDIVAY 263
            ++ +L  L +M+ ++++  ++ Y+ +I   +R   D+   + +F+ ++  GI PDIV Y
Sbjct: 192 RYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 251

Query: 264 NSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTE 323
           N++++      L  EA  + + M    +VPD  +YS L+  F +  +  +   +  EM  
Sbjct: 252 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 311

Query: 324 VNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGE 383
                D+T+ N++++ Y +   +KEA  +F  M+  G  PN  +Y+ +L ++G++  + +
Sbjct: 312 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 371

Query: 384 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIIS 443
              LF  M+    + +  TYN +I+++G+    ++   L  +M    IEP+  TY  II 
Sbjct: 372 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 431

Query: 444 IWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAK---RLLHELRQPD 503
             GK G  E A  + Q + ++        Y  +I A+ +A L   A      +HE+    
Sbjct: 432 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNP 491

Query: 504 NIPR-KTAITILARAGRIEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKKHKNVVEVF 563
           +I    + +   AR G ++E+  +  +  D+G  ++   F   I+ + +  K +  V+ +
Sbjct: 492 SIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 551

Query: 564 EKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQEEGCVFPDEVHFQMLSLYGAR 623
             M      P+   +  VL+ Y   R  D     + EM+    +     +  ML++YG  
Sbjct: 552 VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKT 611

Query: 624 KDYKRLESLFERLDSDPNINKKELHLVVASI 647
           + +  +  L E + S+   N   +H V+  +
Sbjct: 612 ERWDDVNELLEEMLSNRVSN---IHQVIGQM 638

[Close]

BLAST of Spg010709 vs. TAIR 10
Match: AT3G23020.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 202.6 bits (514), Expect = 1.0e-51
Identity = 148/613 (24.14%), Postives = 283/613 (46.17%), Query Frame = 0


Query: 102 QELYSILSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNV 161
           +++   LSP+  R LS +    IL  +  W+R++ I +W   +  Y  +V  YN++LR +
Sbjct: 139 EDVEDALSPWAER-LSNKERTIILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRIL 198

Query: 162 LRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVTGDL 221
            +A +W     L+DEM ++ +     TY TLI  + K G+   AL WL KM +  +  D 
Sbjct: 199 GKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDE 258

Query: 222 VLYSNLIELSRKLCDYSKAISIFSRLK------RSGITPDIVAYNSMINVFGKAKLFREA 281
           V    ++++ +K  ++ KA   F +         S +      YN+MI+ +GK+   +EA
Sbjct: 259 VTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEA 318

Query: 282 RFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDV 341
               K M    +VP TV+++T++ ++  N +  E  S+   M +++C  D  T NI+I +
Sbjct: 319 SETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISL 378

Query: 342 YGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQN 401
           + + + ++ A   F  M+  G++P+ VSY T+L  +    +  EA  L   M    +E +
Sbjct: 379 HTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEID 438

Query: 402 VVTYNTMIKIY------GKSLEHEKATNLVQEMQNRGIEPN------------------- 461
             T + + ++Y       KS    K  ++   M + G   N                   
Sbjct: 439 EYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFIC 498

Query: 462 --------AITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLV 521
                    I Y+ +I  +G +   E+A  LF+ + S G   D+  Y T++     A + 
Sbjct: 499 CQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMP 558

Query: 522 AHAKRLLHELRQ----PDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGCM 581
              +  L ++R+     D IP    I+   + G++  A  V+++  +     D+ V+G +
Sbjct: 559 HKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVL 618

Query: 582 IDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDNADAVYMEMQE--E 641
           I+ F+     +  +   E M+  G   NS +   ++  Y K+   D A+A+Y ++ +   
Sbjct: 619 INAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCN 678

Query: 642 GCVFPDEVHFQ-MLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERANRLND 669
              +PD      M++LY  R   ++ E++F+ +      N+    +++  +Y++  R  +
Sbjct: 679 KTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLC-MYKKNGRFEE 738

[Close]

BLAST of Spg010709 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 198.4 bits (503), Expect = 1.9e-50
Identity = 128/446 (28.70%), Postives = 230/446 (51.57%), Query Frame = 0


Query: 134 SLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLI 193
           ++A++D + E   Y P  F +  ++  +    +   A  L D+M QR    D  TY T++
Sbjct: 172 AVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 231

Query: 194 TYFGKEGMFDAALSWLQKMEQDRVTGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGIT 253
               K G  D ALS L+KME+ ++  D+V+Y+ +I+   K      A+++F+ +   GI 
Sbjct: 232 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 291

Query: 254 PDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSV 313
           PD+  Y+S+I+       + +A  LL +M    + P+ V++S L+  FV+  K +EA  +
Sbjct: 292 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 351

Query: 314 FSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGE 373
           + EM + +   D+ T + +I+ +   D + EA  +F  M      PNVV+Y+T+++ + +
Sbjct: 352 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 411

Query: 374 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAIT 433
           A+   E + LFR M ++ +  N VTY T+I  + ++ + + A  + ++M + G+ PN +T
Sbjct: 412 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 471

Query: 434 YSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLLHELR 493
           Y+ ++    K GKL +A ++F+ L+ S  E D   Y  MI    +AG V     L   L 
Sbjct: 472 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 531

Query: 494 ----QPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKKHK 553
                P+ I   T I+   R G  EEA  + ++  + G L +   +  +I    R+   +
Sbjct: 532 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 591

Query: 554 NVVEVFEKMRSVGHFPNSNVIALVLN 576
              E+ ++MRS G   +++ I LV N
Sbjct: 592 ASAELIKEMRSCGFAGDASTIGLVTN 616

The following BLAST results are available for this feature:

BLAST of Spg010709 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443439.1	0.0e+00	93.92	PREDICTED: pentatricopeptide repeat-containing protein At5g39980, chloroplastic ...	[more]
XP_023521621.1	0.0e+00	93.77	pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like [Cucur...	[more]
XP_022934402.1	0.0e+00	93.47	pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucurbita ...	[more]
KAG7017725.1	0.0e+00	93.32	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]
KAG6580983.1	0.0e+00	93.32	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]

BLAST of Spg010709 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLD8	4.8e-293	77.08	Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidop...	[more]
Q9LQ14	7.4e-52	30.28	Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop...	[more]
Q9S7Q2	8.2e-51	22.77	Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop...	[more]
Q9LS88	1.4e-50	24.14	Pentatricopeptide repeat-containing protein At3g23020 OS=Arabidopsis thaliana OX...	[more]
Q9LQ16	2.6e-49	28.70	Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX...	[more]

BLAST of Spg010709 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UGV7	0.0e+00	93.92	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B8T9	0.0e+00	93.92	pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucumis ...	[more]
A0A6J1F2M9	0.0e+00	93.47	pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbit...	[more]
A0A6J1J8J4	0.0e+00	93.18	pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbit...	[more]
A0A6J1DYU7	0.0e+00	92.43	pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Momordic...	[more]

BLAST of Spg010709 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39980.1	3.4e-294	77.08	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G62930.1	5.3e-53	30.28	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G74850.1	5.8e-52	22.77	plastid transcriptionally active 2	[more]
AT3G23020.1	1.0e-51	24.14	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G62910.1	1.9e-50	28.70	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 209..268 e-value: 1.6E-9 score: 37.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 187..217 e-value: 4.3E-6 score: 24.5 coord: 362..395 e-value: 3.7E-6 score: 24.8 coord: 328..361 e-value: 2.9E-7 score: 28.3 coord: 534..566 e-value: 1.3E-4 score: 19.9 coord: 432..465 e-value: 1.1E-4 score: 20.1 coord: 153..180 e-value: 9.8E-4 score: 17.1 coord: 292..325 e-value: 1.8E-5 score: 22.6 coord: 257..291 e-value: 1.5E-7 score: 29.1 coord: 397..431 e-value: 3.3E-8 score: 31.2 coord: 573..602 e-value: 6.9E-6 score: 23.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 573..598 e-value: 0.0031 score: 17.7 coord: 467..493 e-value: 0.19 score: 12.0 coord: 534..562 e-value: 0.0016 score: 18.5 coord: 362..391 e-value: 2.2E-4 score: 21.3
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 149..194 e-value: 1.4E-10 score: 41.2 coord: 395..438 e-value: 1.1E-14 score: 54.3 coord: 289..334 e-value: 4.0E-10 score: 39.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 150..184 score: 9.382931
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 185..219 score: 9.898111
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 531..565 score: 10.007725
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 395..429 score: 12.298636
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 325..359 score: 11.673842
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 430..464 score: 10.215989
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 255..289 score: 11.301158
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 360..394 score: 10.215989
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 566..600 score: 8.944478
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 465..499 score: 8.801982
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 220..254 score: 9.229472
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 290..324 score: 10.303679
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 233..338 e-value: 8.1E-28 score: 99.0 coord: 97..232 e-value: 6.5E-24 score: 86.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 340..498 e-value: 3.0E-42 score: 147.0 coord: 499..670 e-value: 1.1E-20 score: 76.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..84
None	No IPR available	PANTHER	PTHR47447:SF7	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN, CHLOROPLASTIC	coord: 17..667
None	No IPR available	PANTHER	PTHR47447	OS03G0856100 PROTEIN	coord: 17..667

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg010709.1	Spg010709.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0031425	chloroplast RNA processing
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding