Spg010598 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg010598
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold5: 9644105 .. 9646100 (-)
RNA-Seq Expression	Spg010598
Synteny	Spg010598

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCTTCCTCTACTCGTGAGACCTCTGTTTTATCGAATACTCAAATCCATTGGAAAGAGACCCCGCAAGCTCACATCTTCAAGGCCGATTCAGCGCGAATCGGGGAGGACCTTTCGTTTCAGATCTGAAACGGAAGGGGGAGGAGGCTCCTCCCCCGAATCTCCCTCTGTTTTATTTATAAAAAAAACAGAAGAAAGAAAAGAAAGGAGAAGAAGAAGAAAGAAGGAAAAAAAAAATTCCGGCCGCCACCACCGCCGTTCGCCCGCAGCCAGCGGCCGGCCACCGGAGCTGAAGAAGAAGGAGATGGGAAGGAAAGAAGATGGAGAGGAGAAAGAAGATGGAGAAGAAAGAAAGAGAGAGAAAGAATTTAAAAAATATAAAATAATAATATTTATATTATTTTAATATATTTTTATTTAGAAAATTTAAAAAATATTTTTTTTATTAAAATAATGGTTCCATCAGGTTAAGGTTTAATAGAAAAATGGATGGCAGAGACCAAAGTGCTCCTTATCTCAAACCTCAGGGGTATTTTTGTTGAGTTTGAAAACTCAGGGACCAAAGTGTAACTTAACCTAAACCTCAGAGACTAAAAGTGTATTTTTCCCAATATTTTATTTCATGGATCTCACATCATTCTTAAATATTTGTTTCATGGCAAACAATAAATGGAGGTAGTATAGAAAATTTTCCATACTACCTAGTACTAGAATTTATAAAATTTCCCCTGAAGAAGCCTATGTCTTGGTTAGTTGTTGGCAGAAATTTGCTTCTCCAAACACATCTTTTGCATTGACCAAAATTCTACCTCAACGCTTCTCGGGGAGAAGCTGACATCAACATTTGTGTCAAGATAGATATCTACGCCGATGCACCCTTGCATCGACATAGACACTAGGATTCTGGCTGCACTTTATGTGATGCAAAGGTGTGTCGGGATAGATAATAATTTTTTCCTTTCTCTACTTGTTTTCTTATTATTTGAATTAATATAATTACCTGAAAGTTCATTATTGAAACATACATATTATCAATATATTAAAATGTAATATTTTTTTAAAAAAATAGCATGTAATACATTCATATCATTGAAGACTCTAAACAAACAAATTTATTGAAAAGAAAACAATTAATATAAAAGGCTCCCATTTCTTTTTCATCCGTATTTTTGCAAAACAGCCTTCAAGATTACACAGCTACAAACCTGAAGGAAAAAATAAATAATATAAAAAAATATTAAATAAAAACCAAAAAATAAAAAAAAAATGAAAGAAAAATGAACAATATATATTTTTAATTTTAAACAAGTATTCATAAATATCATTTGATCGTAAAGCGTATAAAATAAGCTTGAAGTGTCTACACTACCCCAAGATGAACTTGATTGTGTCGTTGGCGAGCCAAGTGTCTTGGGCATGTTTGTCCAGGGCGAGTTGTGCCTATAGCCGCATGCCCAAAGCATCCTCATCCATCATGTTTTAATGCCATGTAATTAGTTTTGTTGTTTCCTTTTTGTTTTAACTAGTTTTGGGGGCGTATGACTCATCGTGATTTTCATGTTTAAGCCTGTCAGATCAAATATGCTTCAAAATGTACTATAGGGGGGACCAAGTAGTCATCAAACCACCCCCCTACCAAGCATTGTATACTTTCTTGCAATCAAACTTTCTTGCATCCTTGTATTCAATGCTCTCTTTTAAAGATGTTTTCAATGCTTTTTCTCTCTCACGTTTTATAAAACCATTTTTCTCTCAAAACGTGAGTGGAGGCTAGACCCTACGCCGAAGTTGTCCACGATTTGCGATTTTTGTACGGCTGACTTGCCCGCCGGGTTAGGACAAGTGCCGCACAATCGCCCGTCCCGAATTCGAAAGTTTGCGATTGTGACAAGTGGTATCAGAGCCTAGTTGGCTCCTTGGCTTTCGAGAAGTTGCAATCATGTCGGCGACCAAACAAATGGGCAAGACCCACGTTGAGTAACTCGTTGAGATAG

mRNA sequence

ATGTTCCTTCCTCTACTCGTGAGACCTCTGTTTTATCGAATACTCAAATCCATTGGAAAGAGACCCCGCAAGCTCACATCTTCAAGGCCGATTCAGCGCGAATCGGGGAGGACCTTTCGTTTCAGATCTGAAACGGAAGGGGGAGGAGGCTCCTCCCCCGAATCTCCCTCTATATCTACGCCGATGCACCCTTGCATCGACATAGACACTAGGATTCTGGCTGCACTTTATGTGATGCAAAGGACAAGTGCCGCACAATCGCCCGTCCCGAATTCGAAAGTTTGCGATTGTGACAAGTGGTATCAGAGCCTAGTTGGCTCCTTGGCTTTCGAGAAGTTGCAATCATGTCGGCGACCAAACAAATGGGCAAGACCCACGTTGAGTAACTCGTTGAGATAG

Coding sequence (CDS)

ATGTTCCTTCCTCTACTCGTGAGACCTCTGTTTTATCGAATACTCAAATCCATTGGAAAGAGACCCCGCAAGCTCACATCTTCAAGGCCGATTCAGCGCGAATCGGGGAGGACCTTTCGTTTCAGATCTGAAACGGAAGGGGGAGGAGGCTCCTCCCCCGAATCTCCCTCTATATCTACGCCGATGCACCCTTGCATCGACATAGACACTAGGATTCTGGCTGCACTTTATGTGATGCAAAGGACAAGTGCCGCACAATCGCCCGTCCCGAATTCGAAAGTTTGCGATTGTGACAAGTGGTATCAGAGCCTAGTTGGCTCCTTGGCTTTCGAGAAGTTGCAATCATGTCGGCGACCAAACAAATGGGCAAGACCCACGTTGAGTAACTCGTTGAGATAG

Protein sequence

MFLPLLVRPLFYRILKSIGKRPRKLTSSRPIQRESGRTFRFRSETEGGGGSSPESPSISTPMHPCIDIDTRILAALYVMQRTSAAQSPVPNSKVCDCDKWYQSLVGSLAFEKLQSCRRPNKWARPTLSNSLR

Homology

The following BLAST results are available for this feature:

BLAST of Spg010598 vs.


Match Name	E-value	Identity	Description

BLAST of Spg010598 vs.


Match Name	E-value	Identity	Description

BLAST of Spg010598 vs.


Match Name	E-value	Identity	Description

BLAST of Spg010598 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg010598.1	Spg010598.1	mRNA