Spg010547 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg010547
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCACTA en-spm transposon protein
Locationscaffold5: 8722151 .. 8724066 (-)
RNA-Seq ExpressionSpg010547
SyntenySpg010547
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGGCAAAGGCTCTTCCGATGCATCTCCACGCGTCGGAAAGAAAGTCGAAATAGAACAGTCGGCAGAAATTGTCTTTCCCGACGCACTATCATTCGTGTCGATATAAAAAACCACTAATCACTAGAAAGCGAGTTGATAATATCAGAATCACCTGTAAAAGAATAGAATAGCAAGTGACTTAGTAAAAGAAGATTAAAGTTCTCAACGAAAGTAAAACTCACATTAAATGTTAACACATGCTTGGAGAGCCACAACTTAATTTTCAACTAATGATTTTAACATTTACATGAAAATGCCTAGAACCTACTTAAACGGACATATAAAAATTTTTATGCAAAAGAAAGAACTAAATAAATCCTTGTCACTAAAGATGAGCACTAGATCATAAAGCAACAATCATGGCAAAACCACCCAAAAACATGGTTCATCCAAGATGAGCACTAGATCATCAAGGAACAAGCATGTACAAGACTTCTAAATGGTTTGTCCAAGTTGCCTACCTCCACTATCTAGAGAGAGTGAAGTAATATCACTACCGAAGAGAGTACAATACATTTGTGTAACCAATGCGAATGATAATACCAACTCATGTACATTCATTCACTAACAAAACAACCCAATGGACAGGATGTACGGTTGACTCTCAAATCATATCATGCTAGTATAATAAAAACCACTAAGTAAAAGGGGAAAAAAAAAATAAAAGCCAAAGTTCCAAGTATGTAGAGAAAAATGAATTTAGCCACCTTAAAGGTTTTCCCAACCTTTCCAATTGCTTTGAACTTTTACAAATGTGACTATCGAGGTTGATGTTCCTAGATAGGCATCTTGATAGGCACATTACTAAGCATGTTACTAATCACGAGAAGATTCTGATCCATATTCATCCTGAGGTGAAGAAATTGGTAGTCACATACGCTACCAGGTTCAGCTTATCCATCGAGAATGCAGACGTGAGACTATCCCCGTCCGTTTGGCTACTTGGAATGCTGTGTGACTCAAGAAGTCAAGGACCTCGTCATAGCCCGGTTGTTGGTGAGTTCAAATTCCCACTTGTTATTAACATTATTAATATTCTGATACATTCGTTTTGTTCGTGTAGTCGCATTTCATATTGGACTTTCCTCAACCACAAGATGATGAATTCCTTCAAGGAGTACAGGGGGGAGTTATCAAAACACTACAAGTGTTTTGAAACTCCTAAAGAGGCCCATGCAAACCCACCCAAGAGACTGAAGGATGCAATAGATGACTGGCATCACCTATACAGTAGATTCGAAGATCCTAAGTGGAAGGTAATCACTGTATTCTTTTTTTGGTTCCATTATGGTTTGCTCTATTATTTATTTTCTTTACATGTTATTTTATTGTTTGCTAGCACTAATCGAAAACCAACACTGCAAGTCGGTCGACCCTCTCATTCAACCATAAGGCTGGACCGAAATCTTTCATCATGAGTTGGTAAGCTGTATATCCTTGTGTTTTGAGTACTTTATTCGTCTGTTTTGTAACTTTATGCATTTCCTTTATTGGTCTTTGTGTTGCAAAAAGAGAAAGAGGGTCATGATGTAGGTCCAATTGAGCTGTTCGAACATACCCACTCGAGAGATAGGAAGTGGGTCAATCAAGCTGCTGAGGACGCACATGTAAGTATGAAAACTAGGTTCATTTTTGAAGTTTATATACTTTAATTACACTTTCATTGTGTTACAAGTGAAGATGATCTTCTTGCGAGATGCTCCCATGCAGGAAGGGTCCGAACTGCTCTCGGGGCCAATCATATGTGAGGAGGTATTGGGAAAAAAGGTCGAGTCGTGTGAAAGGAATGAGATGGGGGCCAAAGCCTTTGAAATCATCAAGGGGTGGCAGATCCTCAAGTTTGGGACCCACACAGCGAGGACTAGAACATGA

mRNA sequence

ATGGTTGGCAAAGGCTCTTCCGATGCATCTCCACGCGTCGGAAAGAAAGTCGAAATAGAACAGTCGGCAGAAATTGTCTTTCCCGACGCACTATCATTCGATGTACGGTTGACTCTCAAATCATATCATGCTAATAGGCATCTTGATAGGCACATTACTAAGCATGTTACTAATCACGAGAAGATTCTGATCCATATTCATCCTGAGGTGAAGAAATTGGTAGTCACATACGCTACCAGTCGCATTTCATATTGGACTTTCCTCAACCACAAGATGATGAATTCCTTCAAGGAGTACAGGGGGGAGTTATCAAAACACTACAAGTGTTTTGAAACTCCTAAAGAGGCCCATGCAAACCCACCCAAGAGACTGAAGGATGCAATAGATGACTGGCATCACCTATACAGTAGATTCGAAGATCCTAAGTGGAAGAAAGAGGGTCATGATGTAGGTCCAATTGAGCTGTTCGAACATACCCACTCGAGAGATAGGAAGTGGGTCAATCAAGCTGCTGAGGACGCACATGTAATGAAGATGATCTTCTTGCGAGATGCTCCCATGCAGGAAGGGTCCGAACTGCTCTCGGGGCCAATCATATGTGAGGAGGTATTGGGAAAAAAGGTCGAGTCGTGTGAAAGGAATGAGATGGGGGCCAAAGCCTTTGAAATCATCAAGGGGTGGCAGATCCTCAAGTTTGGGACCCACACAGCGAGGACTAGAACATGA

Coding sequence (CDS)

ATGGTTGGCAAAGGCTCTTCCGATGCATCTCCACGCGTCGGAAAGAAAGTCGAAATAGAACAGTCGGCAGAAATTGTCTTTCCCGACGCACTATCATTCGATGTACGGTTGACTCTCAAATCATATCATGCTAATAGGCATCTTGATAGGCACATTACTAAGCATGTTACTAATCACGAGAAGATTCTGATCCATATTCATCCTGAGGTGAAGAAATTGGTAGTCACATACGCTACCAGTCGCATTTCATATTGGACTTTCCTCAACCACAAGATGATGAATTCCTTCAAGGAGTACAGGGGGGAGTTATCAAAACACTACAAGTGTTTTGAAACTCCTAAAGAGGCCCATGCAAACCCACCCAAGAGACTGAAGGATGCAATAGATGACTGGCATCACCTATACAGTAGATTCGAAGATCCTAAGTGGAAGAAAGAGGGTCATGATGTAGGTCCAATTGAGCTGTTCGAACATACCCACTCGAGAGATAGGAAGTGGGTCAATCAAGCTGCTGAGGACGCACATGTAATGAAGATGATCTTCTTGCGAGATGCTCCCATGCAGGAAGGGTCCGAACTGCTCTCGGGGCCAATCATATGTGAGGAGGTATTGGGAAAAAAGGTCGAGTCGTGTGAAAGGAATGAGATGGGGGCCAAAGCCTTTGAAATCATCAAGGGGTGGCAGATCCTCAAGTTTGGGACCCACACAGCGAGGACTAGAACATGA

Protein sequence

MVGKGSSDASPRVGKKVEIEQSAEIVFPDALSFDVRLTLKSYHANRHLDRHITKHVTNHEKILIHIHPEVKKLVVTYATSRISYWTFLNHKMMNSFKEYRGELSKHYKCFETPKEAHANPPKRLKDAIDDWHHLYSRFEDPKWKKEGHDVGPIELFEHTHSRDRKWVNQAAEDAHVMKMIFLRDAPMQEGSELLSGPIICEEVLGKKVESCERNEMGAKAFEIIKGWQILKFGTHTARTRT
Homology
[Close]
BLAST of Spg010547 vs. NCBI nr
Match: KAA0062687.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 102.1 bits (253), Expect = 7.1e-18
Identity = 54/126 (42.86%), Postives = 79/126 (62.70%), Query Frame = 0 

Query: 87  FLNHKMMNSFKEYRGELSKHYKCFETPKEAHANPPKRLKDAIDDWH----HLYSR-FEDP 146
           F+ H+M+ +FKE+R +  KH+K +  P+EA ANPP  L    +DWH    H  SR F+  
Sbjct: 110 FVEHQMLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQHE 169

Query: 147 KWKKEGHDVGPIELFEHTHSRDRKWVNQAAEDAHVMKMIFLRDAPMQEGSELLSGPIICE 206
             ++ G  V  +ELF  TH R   +V+QAAEDAH  +M+ L+  P+ EGS+ LS   IC+
Sbjct: 170 LAERRGQPVDRVELFRETHVRAGTFVSQAAEDAH-NQMLELQSQPIPEGSQPLSEDEICD 229

Query: 207 EVLGKK 208
           +VLG++
Sbjct: 230 QVLGRR 234

[Close]
BLAST of Spg010547 vs. NCBI nr
Match: KAA0056540.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 99.8 bits (247), Expect = 3.5e-17
Identity = 54/126 (42.86%), Postives = 77/126 (61.11%), Query Frame = 0 

Query: 87  FLNHKMMNSFKEYRGELSKHYKCFETPKEAHANPPKRLKDAIDDWH----HLYSR-FEDP 146
           F+ H+M+  FKE+R +  +H+K +  P+EA ANPP  L    +DWH    H  SR F+  
Sbjct: 130 FVEHQMLTIFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQYE 189

Query: 147 KWKKEGHDVGPIELFEHTHSRDRKWVNQAAEDAHVMKMIFLRDAPMQEGSELLSGPIICE 206
             K+ G  V  +ELF  TH R   +V+QAAEDAH  +M+ L+  P  EGS+ LS   IC+
Sbjct: 190 LAKRRGQPVDRVELFRETHVRAGTFVSQAAEDAH-NQMLELQSQPTPEGSQPLSEDEICD 249

Query: 207 EVLGKK 208
           +VLG++
Sbjct: 250 QVLGRR 254

[Close]
BLAST of Spg010547 vs. NCBI nr
Match: KAA0042210.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK26781.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 95.5 bits (236), Expect = 6.6e-16
Identity = 49/126 (38.89%), Postives = 76/126 (60.32%), Query Frame = 0 

Query: 87  FLNHKMMNSFKEYRGELSKHYKCFETPKEAHANPPKRLKDAIDDWHHLY-----SRFEDP 146
           F+ H+M+ +FKE+R +  +H+K +  P+EA ANPP  L    +DWH LY       F+  
Sbjct: 125 FVEHQMLTTFKEFRVDCHRHFKKYSNPEEARANPPSALVGRHEDWHFLYVHYISRAFQYK 184

Query: 147 KWKKEGHDVGPIELFEHTHSRDRKWVNQAAEDAHVMKMIFLRDAPMQEGSELLSGPIICE 206
             +++G     +ELF  TH R   +++QA EDAH  +M+ L+  P  EGS+ LS   IC+
Sbjct: 185 LVERKGEPADHVELFRKTHIRAGTFMSQATEDAH-HQMLELQSKPTLEGSQPLSEDEICD 244

Query: 207 EVLGKK 208
           +VLG++
Sbjct: 245 QVLGRR 249

[Close]
BLAST of Spg010547 vs. NCBI nr
Match: KAA0045999.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 8.6e-16
Identity = 52/127 (40.94%), Postives = 75/127 (59.06%), Query Frame = 0 

Query: 86  TFLNHKMMNSFKEYRGELSKHYKCFETPKEAHANPPKRLKDAIDDWH----HLYSR-FED 145
           TF+ H+M+ +FKE+R    +H+K +  P+EA ANPP  L    +DWH    H  SR F+ 
Sbjct: 163 TFVEHQMLTTFKEFRANCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQY 222

Query: 146 PKWKKEGHDVGPIELFEHTHSRDRKWVNQAAEDAHVMKMIFLRDAPMQEGSELLSGPIIC 205
              K+    V  +ELF  TH R   +V+QAAEDAH  +M+ L+  P  EGS+  S   IC
Sbjct: 223 ELAKRRWQSVDRVELFWETHVRAGTFVSQAAEDAH-NQMLELQSQPTPEGSQPFSEDEIC 282

Query: 206 EEVLGKK 208
           ++V G++
Sbjct: 283 DQVFGRR 288

[Close]
BLAST of Spg010547 vs. NCBI nr
Match: TYK13588.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 8.6e-16
Identity = 52/127 (40.94%), Postives = 75/127 (59.06%), Query Frame = 0 

Query: 86  TFLNHKMMNSFKEYRGELSKHYKCFETPKEAHANPPKRLKDAIDDWH----HLYSR-FED 145
           TF+ H+M+ +FKE+R    +H+K +  P+EA ANPP  L    +DWH    H  SR F+ 
Sbjct: 3   TFVEHQMLTTFKEFRANCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQY 62

Query: 146 PKWKKEGHDVGPIELFEHTHSRDRKWVNQAAEDAHVMKMIFLRDAPMQEGSELLSGPIIC 205
              K+    V  +ELF  TH R   +V+QAAEDAH  +M+ L+  P  EGS+  S   IC
Sbjct: 63  ELAKRRWQSVDRVELFWETHVRAGTFVSQAAEDAH-NQMLELQSQPTPEGSQPFSEDEIC 122

Query: 206 EEVLGKK 208
           ++V G++
Sbjct: 123 DQVFGRR 128

[Close]
BLAST of Spg010547 vs. ExPASy TrEMBL
Match: A0A5A7V6R4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2955G00020 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.4e-18
Identity = 54/126 (42.86%), Postives = 79/126 (62.70%), Query Frame = 0 

Query: 87  FLNHKMMNSFKEYRGELSKHYKCFETPKEAHANPPKRLKDAIDDWH----HLYSR-FEDP 146
           F+ H+M+ +FKE+R +  KH+K +  P+EA ANPP  L    +DWH    H  SR F+  
Sbjct: 110 FVEHQMLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQHE 169

Query: 147 KWKKEGHDVGPIELFEHTHSRDRKWVNQAAEDAHVMKMIFLRDAPMQEGSELLSGPIICE 206
             ++ G  V  +ELF  TH R   +V+QAAEDAH  +M+ L+  P+ EGS+ LS   IC+
Sbjct: 170 LAERRGQPVDRVELFRETHVRAGTFVSQAAEDAH-NQMLELQSQPIPEGSQPLSEDEICD 229

Query: 207 EVLGKK 208
           +VLG++
Sbjct: 230 QVLGRR 234

[Close]
BLAST of Spg010547 vs. ExPASy TrEMBL
Match: A0A5A7UNA5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G00400 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-17
Identity = 54/126 (42.86%), Postives = 77/126 (61.11%), Query Frame = 0 

Query: 87  FLNHKMMNSFKEYRGELSKHYKCFETPKEAHANPPKRLKDAIDDWH----HLYSR-FEDP 146
           F+ H+M+  FKE+R +  +H+K +  P+EA ANPP  L    +DWH    H  SR F+  
Sbjct: 130 FVEHQMLTIFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQYE 189

Query: 147 KWKKEGHDVGPIELFEHTHSRDRKWVNQAAEDAHVMKMIFLRDAPMQEGSELLSGPIICE 206
             K+ G  V  +ELF  TH R   +V+QAAEDAH  +M+ L+  P  EGS+ LS   IC+
Sbjct: 190 LAKRRGQPVDRVELFRETHVRAGTFVSQAAEDAH-NQMLELQSQPTPEGSQPLSEDEICD 249

Query: 207 EVLGKK 208
           +VLG++
Sbjct: 250 QVLGRR 254

[Close]
BLAST of Spg010547 vs. ExPASy TrEMBL
Match: A0A5A7TFV0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00810 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.2e-16
Identity = 49/126 (38.89%), Postives = 76/126 (60.32%), Query Frame = 0 

Query: 87  FLNHKMMNSFKEYRGELSKHYKCFETPKEAHANPPKRLKDAIDDWHHLY-----SRFEDP 146
           F+ H+M+ +FKE+R +  +H+K +  P+EA ANPP  L    +DWH LY       F+  
Sbjct: 125 FVEHQMLTTFKEFRVDCHRHFKKYSNPEEARANPPSALVGRHEDWHFLYVHYISRAFQYK 184

Query: 147 KWKKEGHDVGPIELFEHTHSRDRKWVNQAAEDAHVMKMIFLRDAPMQEGSELLSGPIICE 206
             +++G     +ELF  TH R   +++QA EDAH  +M+ L+  P  EGS+ LS   IC+
Sbjct: 185 LVERKGEPADHVELFRKTHIRAGTFMSQATEDAH-HQMLELQSKPTLEGSQPLSEDEICD 244

Query: 207 EVLGKK 208
           +VLG++
Sbjct: 245 QVLGRR 249

[Close]
BLAST of Spg010547 vs. ExPASy TrEMBL
Match: A0A5A7TXN4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005590 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 4.2e-16
Identity = 52/127 (40.94%), Postives = 75/127 (59.06%), Query Frame = 0 

Query: 86  TFLNHKMMNSFKEYRGELSKHYKCFETPKEAHANPPKRLKDAIDDWH----HLYSR-FED 145
           TF+ H+M+ +FKE+R    +H+K +  P+EA ANPP  L    +DWH    H  SR F+ 
Sbjct: 163 TFVEHQMLTTFKEFRANCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQY 222

Query: 146 PKWKKEGHDVGPIELFEHTHSRDRKWVNQAAEDAHVMKMIFLRDAPMQEGSELLSGPIIC 205
              K+    V  +ELF  TH R   +V+QAAEDAH  +M+ L+  P  EGS+  S   IC
Sbjct: 223 ELAKRRWQSVDRVELFWETHVRAGTFVSQAAEDAH-NQMLELQSQPTPEGSQPFSEDEIC 282

Query: 206 EEVLGKK 208
           ++V G++
Sbjct: 283 DQVFGRR 288

[Close]
BLAST of Spg010547 vs. ExPASy TrEMBL
Match: A0A5D3CQW3 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00740 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 4.2e-16
Identity = 52/127 (40.94%), Postives = 75/127 (59.06%), Query Frame = 0 

Query: 86  TFLNHKMMNSFKEYRGELSKHYKCFETPKEAHANPPKRLKDAIDDWH----HLYSR-FED 145
           TF+ H+M+ +FKE+R    +H+K +  P+EA ANPP  L    +DWH    H  SR F+ 
Sbjct: 3   TFVEHQMLTTFKEFRANCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQY 62

Query: 146 PKWKKEGHDVGPIELFEHTHSRDRKWVNQAAEDAHVMKMIFLRDAPMQEGSELLSGPIIC 205
              K+    V  +ELF  TH R   +V+QAAEDAH  +M+ L+  P  EGS+  S   IC
Sbjct: 63  ELAKRRWQSVDRVELFWETHVRAGTFVSQAAEDAH-NQMLELQSQPTPEGSQPFSEDEIC 122

Query: 206 EEVLGKK 208
           ++V G++
Sbjct: 123 DQVFGRR 128

The following BLAST results are available for this feature:
BLAST of Spg010547 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0062687.17.1e-1842.86CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0056540.13.5e-1742.86CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0042210.16.6e-1638.89CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK26781.1 CACTA en-... [more]
KAA0045999.18.6e-1640.94CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
TYK13588.18.6e-1640.94CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
BLAST of Spg010547 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg010547 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V6R43.4e-1842.86CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7UNA51.7e-1742.86CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5A7TFV03.2e-1638.89CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7TXN44.2e-1640.94CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3CQW34.2e-1640.94CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
BLAST of Spg010547 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg010547.1Spg010547.1mRNA