Spg010446 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg010446
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold12: 32069630 .. 32075136 (-)
RNA-Seq Expression	Spg010446
Synteny	Spg010446

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCATAAAACCCAACAACGCTGACACTAACCCATTTTCAGAAGCTGAGTCTCATTTCGCTGATGCAAAATTTTATATGAAGAGCGACAACACTGGGGAGACTATACCTGCAGAAATCCCCTTGATAAAAAAGAATGAGAAACTCAATTTAGAACCCCAAGCTGATACAAGAAAGGAAGCTGTTGAAGATGTGGAGGCTTCTGATCTGAAAAAGGGTGAAACGTCTACAAATCTTGTGAAACCTAAAGTTGTAAAAGATGAGAAGTGTTCACCTGTCCTACGATACATCCCTTTATCTCGACGTAAAAAGGGTGAATCACCTTTCACTGAATGTCCAAAAAGCATAAAGGTCGGTGACGTTGAAATACTGAAGGAAAGTTTCACTACGCCTCTTACAAAGATCACAAAGCAAGAGGTTAAGAAACCTGAGGATGACCAGATAAAAATGATTCTGCCTGACAAACGAACTAAAGACGGGTTCGACCCCAAGGCATACAAACTTCTAACGAACGCAGGTTATGACTTCACAACTCAGACTGAGTTTAAAAGTCTAAGGGCTTTTGATGGAAGATCTGAGCTCTCTGCAACACAGAAGAAGCTTCTAAAGGAAGGTTATAGTCTGCCTACAACGAGAAAAGGGCTTGGATATAAGTCGCCAAAACCGGTTCGCATAACAAGAAGAGGGAAGGGGAAAGTGGCAGACACAAATCATATAACAGTAGAGGAGGTTGATGATTCAAAAGAAAAAGAAAGTGTCGACCAACGAACTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTTAGTCTTTCAGAGATTAAGTGTCAATGAAATGGAAGAAGAGAGCACACAACCTACTAATAGCTCCACTCGACCTTCAGTTTTTCGAAGGTTAAGTATGCCCATTGGGGAGGAAGAGAGTACATTTTCAACTCCGAATGTCACTCGATCTTCAGCTTTTCAAAGGTTAAATATGCCCATTGCGAAAGAAGAGAGTACATTTTCAACTCCGGATGTGACTCGGCCATCAGTTTTTCAGAGGTTAAGTGTTACCACGAGAAGAGACAAAAAGGAACAGTCTGCTTCATCGATATCTCACCGGCTTCAAAATGAAGATGCGATGAAAAATGAAAAGATCACTAAGGCCAATGGAGAAATTCGTAGTGCAGTTACTTCACGAATGAAATGAAAAACCCTTGTTACTGTCGATACGGATGGTTCTTTGAAGATAAAGAGACGTGATGTTGCCATCACCAATCCTTCAGAAGAAGATAGTGACCAGGAAGAAGAACTAACCTCTTGCCTTCATATTACTGTTGAAGAAGAAACAGAGGTCGAAGTGTCTGAAGCAGACGAGGATGAAGCACCTTTATCACTTGAAGACGGCAGCGAATCTATAGTGGATGAGCTTAAAGAAGTAAACCTGGGTACGCCAGAAGAGCCACGCCCAACTTTTATAAGCATGTCACTTACTCCCGAAGAAGAAGGTGAATATATGAGTTTACTCGCTTCATATAAAGATATCTTCGCCTGGTCATATAAAGAGATGCCTGGACTTGACCCAAAAGTAGCTGTCCATCATCTCGCAATTAAAGAGGGGTATCGGCCGGTCAAACAAGCTTAGCGACGCTTTCGCCCGGAACTTATCCCTCAAATTGAAATAGAGGTCAACAAGTTGATAGAAGCGGGATTCATCCGTGAGGTGAAATACCCTACATGGATAGCCAACATTGTTCCTGTTAGAAAGAAGAATGGACAGCTTCGTGTTTGTGTTGACTTTCGCGATTTGAATAACGCATGTCCGAAAGACAATTTTCCACTACCAATCACAGAAATCATGGTGGATGCCACCACAGGACATGAAGCTTTGTCTTTTATGGATGGATCATCGGGCTATAACCAGATTCGAATGGCTCTTGCAGATGAAGAAATGACAGCCTTTCGAACTCCAAAAGGGATATACTGTTACAAAGTGATGCCCTTTGGATTAAAGAATGTTGGTGCTACTTATCAACGTGCTATGCAAAAGGTCTTCGACGATATGCTGCATAAACATGTCGAGTGCTATGTCGATGATCTTGTTGTTAAGTCAAAGAGACGACAAGATCACTTGAAGGATCTAAAAGTGGTATTTGATCGTTTGAGAAAGTATCAATTGAGGATGAACCCTCTCAAATGTGCATTCGGTGTTACTTCTGGGAAATTCATTGGATTTGTTGTTAGACATCGATGAATCGAAATAGACCAGTCAAAGATTGACGCCATTCAAAAGATGCCAAGGCCTAAAAACTTACATGAGTTGAGAAGCTTGCAGGGTCGTTTGGCCTACATTCGAAGATTCATCTCTAACTTAGCCGGTCGATGCCAACCTTTTCAAAGGCTAATGAGGAAAGGAGAAAAATTCGAGTGGGATGAAGCATGTCAAAACGCTTTCGAAAGCATTAAGAAATATTTGCTTAACCCTCCTGTCTTAGGAGCCCCCATATCTAGAAAGCCATTGATTCTATATATCGCTGCTCAAGAAAGGTCACTGGGAGCGTTATTGGCACAAGAGGGCGAGAAGGGAAAAGAACGAGCCCTTTATTACTTAAGCAGGACTCTGAATGGTGCTGAGATAAATTACTCACCCATTGAGAAAATGTGTCTTGCTCTTTTCTTCGCTATTGACAAGTTAAGGCATTACATGCAAGCTTTCACAGTGCACTTGGTCGCGAAGGCTGATCCTGTTAGATACGTTCTATCGAGAGCGGTTATTTCTGGACGCTTAGCTAAGTGGGCCATCTTACTCCAGCAATATGACATCGTGTACGTACCTCAAAAGGCGGTCAAGGGGCAGACATTAGCCGACTTCTTGGCGAATCATCCAATTCCTTCAGATTGGAAGTTATGTGAGGTACCTGATGAAGAAGTCTTCTATGTTGAAATCACGGAGCCCTAGACTATGTACTTTGATGGTGGAGCACGAAGAAGTGGAGCGGGGGCAGGAATCGTCTTTATTTCGCCTGAGAAACACATGCTCCCCTATAGCTTTGTGCTTGGTGAATTGTGTTCAAACAATGTCGCTGAATATCAAGCACTGATAATTGGCCTCCAAATGGCCTTGGAGATTGGCATAACATATATTGAGGTCTATGGTGATTCAAAGTTGGTCGTTAGCCAACTCTTACTCCAGTATGAAGTGAAACATAAAGACCTGAAGCCTTATTTCATCTATGCAAAACAACTGCTAGAAAGGTTTGACAGTATAGTACTAGAGCATGTCTCGAGATCAGAAAATAAAAAGGCAGATGCTCTAGCTAATTTGGCGACTACCCTAACAATCTCAGAGGATATGTCAATGAACATCTCACTTTGTCAGAAGTGGATTGTGCCGCCAATAGAAGATGAAGGTCAAGAGGTGAATATGATCTATGTTTATGCAATTGACGAAGAGGACTGGCGACAGCCTATTATAGATTATCTTCAACATGGAAGACTTCCCACAAATCCCAGACGTAGGGCTGATATACGGAGAAGAGGAGCTCGATTTATTTACTACAAGGAGACCCTTTATCGTCGTTCTTATGAGGGACTCTTCCTTCGATGCCTTGGAAAGGAAGAAGCAACAAAGGCATTAGATGAGGCACATTCAGGTGTTTGTGGCGCCCACCAGTCGGGTCCAAAGCTCCAGTTTCAATTAAAAAGGATGGGTTATTATTGGCCTACAATGATTCGAGACTCAATTGAATATGCAAAGAAGTGTGAAGCTTGTCAATTCCATGCAAACTTCATACATCAGCCACTGGAGCCTCTTCATCCTACTGTAGCTTTATGGCCTTTTGAAGCTTGGGGACTTGACCTTGTTGGCCCTATAACACCTAAGTCTTCAGCAGGACATTCTTACATTCTTGCAGGGACGGATTACTTCTCAAGATGGGCTGAAGCTGTCGCATTGAAAGAAGCCAAGAAAGAAAATGTTGTGGATTTCATTCGAACTCATATAATCTATCGGTACGGTATCCCTCATCGCATTGTGACAGATAATGGAAGGCAATTCTCCAACGGCCTAATGGACAAGTTGTGTGAGAAGTTTAACTTCAAGCAATACAAGTCCTCTATGTACAATGCCGCGGCAAATGGGTTGGCAGAGGCATTCAATAAGACGTTGTGTAACTTATTGAAGAAAGTAGTCTCCAAGACAAAGAGAGATTGGCAAGAAAAGATCGGTGAAGTGTTGTGGGCTTACCGAACTACTCATCGCACTCCTACAGGGGTCACACCTTATTCCCTCGTCTATGGGGTAGAAGCTGTGCTCCCGTTAGAAAGAGAGATTCCCTCATTAAGGATGGCTGTCCAAGAAGGGTTGACAACGGAAGATAATGCTAGGTTGCGCCTTCAAGAGTTAGAAGCAATTGATGAAAGAAGGTTAGAGGCTCAGGAAGCTTTGGAATGCTACCAAGCACGGATGTCTAAAGCCTTTGACAAGAATGTGAAGCTTCGATCATTTCAAGTTGGTGATCTTGTGCTAGCTGTTCGAAGACCCATCATCACGACACGACACACAGGGAACAAGTTCACACCTAAATGGGATGGACCCTACGTCGTCAAGGAAGTCTACACAAATGGAGCGTACAAGATCGTGGATAAAGACGGATTAAGAATAGGCTCGATAAATGGCAAATTTCTTAAAAAGTTTTATGCGTGAAATGTAACGCTCCATATCGCAAGAGCCTAAACTGCATAATACTCTTGGCCCGCATGAGTTAAAAAGGTGAACGGCCAAAAAAAAAAATCAAATTTGTACCTTGAACTACGTTATGACTTGATCCCTTTTCTTCAAGGGTACGTAGGCAGCTTAAAGAAAACTTTAAGTTCAGTCCCTGCAAACAAAAAAACAAAGTGCCACAAATATTGGAGCATGATAAAACAAATTGAAGAAGTTCATCCCTACTGGGGGCAACACAACGGGTTGAAGACGTACATTGTTATGAATGAAATGTTATGAATTGAGTGCATAAAAGAGGGCTTCGTTCTTCAAGTTTGGCAACTCACTCACTCCAAGTTTGGCATCTCGTCTCAAGTTTGGTGTTTCGCTTCTTCAAAGTTTGGCGTCTCACCCCTTCAAGTATGGCGCCTTGTTTCCTCAAGTTTGCATTCTCCATGGTGGTGAAATCACTGCAAGTGAAGCTGACGACAACCGAGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAATTGAAGCTGATGACGACCGTGGTGACCACCCCTACAGGAAACTACAGTCATCAAAGCGGCTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGTCGATCGTGGTGACCACCCCTGCAAGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCAGTGCAAGTGAAGCTGATGTCGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGATAG

mRNA sequence

GGCATAAAACCCAACAACGCTGACACTAACCCATTTTCAGAAGCTGAGTCTCATTTCGCTGATGCAAAATTTTATATGAAGAGCGACAACACTGGGGAGACTATACCTGCAGAAATCCCCTTGATAAAAAAGAATGAGAAACTCAATTTAGAACCCCAAGCTGATACAAGAAAGGAAGCTGTTGAAGATGTGGAGGCTTCTGATCTGAAAAAGGGGCTTGGATATAAGTCGCCAAAACCGGTTCGCATAACAAGAAGAGGGAAGGGGAAAGTGGCAGACACAAATCATATAACAGTAGAGGAGGTTGATGATTCAAAAGAAAAAGAAAGTGTCGACCAACGAACTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTTAGTCTTTCAGAGATTAAGTGTCAATGAAATGGAAGAAGAGAGCACACAACCTACTAATAGCTCCACTCGACCTTCAGTTTTTCGAAGGTTAAGTATGCCCATTGGGGAGGAAGAGAGTACATTTTCAACTCCGAATGTCACTCGATCTTCAGCTTTTCAAAGGTTAAATATGCCCATTGCGAAAGAAGAGAGTACATTTTCAACTCCGGATGTGACTCGGCCATCAGTTTTTCAGAGGTTAAGTGTTACCACGAGAAGAGACAAAAAGGAACAAGGGCTTCGTTCTTCAAGTTTGGCAACTCACTCACTCCAAGTTTGGCATCTCGTCTCAAGTTTGGTGTTTCGCTTCTTCAAAGTTTGGCGTCTCACCCCTTCAAGTATGGCGCCTTGTTTCCTCAAGTTTGCATTCTCCATGGTGGTGAAATCACTGCAAGTGAAGCTGACGACAACCGAGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAATTGAAGCTGATGACGACCGTGGTGACCACCCCTACAGGAAACTACAGTCATCAAAGCGGCTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGTCGATCGTGGTGACCACCCCTGCAAGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCAGTGCAAGTGAAGCTGATGTCGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGATAG

Coding sequence (CDS)

GGCATAAAACCCAACAACGCTGACACTAACCCATTTTCAGAAGCTGAGTCTCATTTCGCTGATGCAAAATTTTATATGAAGAGCGACAACACTGGGGAGACTATACCTGCAGAAATCCCCTTGATAAAAAAGAATGAGAAACTCAATTTAGAACCCCAAGCTGATACAAGAAAGGAAGCTGTTGAAGATGTGGAGGCTTCTGATCTGAAAAAGGGGCTTGGATATAAGTCGCCAAAACCGGTTCGCATAACAAGAAGAGGGAAGGGGAAAGTGGCAGACACAAATCATATAACAGTAGAGGAGGTTGATGATTCAAAAGAAAAAGAAAGTGTCGACCAACGAACTTCTGTTTTTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTTAGTCTTTCAGAGATTAAGTGTCAATGAAATGGAAGAAGAGAGCACACAACCTACTAATAGCTCCACTCGACCTTCAGTTTTTCGAAGGTTAAGTATGCCCATTGGGGAGGAAGAGAGTACATTTTCAACTCCGAATGTCACTCGATCTTCAGCTTTTCAAAGGTTAAATATGCCCATTGCGAAAGAAGAGAGTACATTTTCAACTCCGGATGTGACTCGGCCATCAGTTTTTCAGAGGTTAAGTGTTACCACGAGAAGAGACAAAAAGGAACAAGGGCTTCGTTCTTCAAGTTTGGCAACTCACTCACTCCAAGTTTGGCATCTCGTCTCAAGTTTGGTGTTTCGCTTCTTCAAAGTTTGGCGTCTCACCCCTTCAAGTATGGCGCCTTGTTTCCTCAAGTTTGCATTCTCCATGGTGGTGAAATCACTGCAAGTGAAGCTGACGACAACCGAGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAATTGAAGCTGATGACGACCGTGGTGACCACCCCTACAGGAAACTACAGTCATCAAAGCGGCTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGTCGATCGTGGTGACCACCCCTGCAAGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCAGTGCAAGTGAAGCTGATGTCGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGATAG

Protein sequence

GIKPNNADTNPFSEAESHFADAKFYMKSDNTGETIPAEIPLIKKNEKLNLEPQADTRKEAVEDVEASDLKKGLGYKSPKPVRITRRGKGKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRRLSMPIGEEESTFSTPNVTRSSAFQRLNMPIAKEESTFSTPDVTRPSVFQRLSVTTRRDKKEQGLRSSSLATHSLQVWHLVSSLVFRFFKVWRLTPSSMAPCFLKFAFSMVVKSLQVKLTTTEVTTPAGNYSHQSDWSRQVVKSLQLKLMTTVVTTPTGNYSHQSGWSRQVVKSLQVKLMSIVVTTPARNYSHQSDWSRQVVKSVQVKLMSTVVTTPAGNYSHQSDWSR

Homology

[Close]

BLAST of Spg010446 vs. NCBI nr
Match: KAA0047672.1 (uncharacterized protein E6C27_scaffold115G001730 [Cucumis melo var. makuwa] >TYK08327.1 uncharacterized protein E5676_scaffold648G001250 [Cucumis melo var. makuwa])

HSP 1 Score: 141.7 bits (356), Expect = 1.3e-29
Identity = 104/296 (35.14%), Postives = 142/296 (47.97%), Query Frame = 0


Query: 1   GIKPNNADTNPFSEAESHFADAKFYMKSDNTGETIPAEIPLIKKNEKLNL---------- 60
           G K    D+NPFSEAESHFADAKFY+K+D++ E +  E+ L+ + +   L          
Sbjct: 636 GEKKVEVDSNPFSEAESHFADAKFYLKNDSSPEAVSIEVLLVNREDNFQLKSLASRKPHK 695

Query: 61  ----------EPQADTRK-------------------------------EAVEDVEASDL 120
                     E    T K                               E+ + ++  D+
Sbjct: 696 STETFHSGKNEASTSTAKSVILMNENTSNPPILRYVPLSRCKKGESPFVESPQGLKVGDI 755

Query: 121 ---------------KKGLGYKSPKPVRITRRGKGKVADTNHITVEEVDDSKEKESVDQR 180
                          KKGLGYKSP+P+RITR+GK KV D+NHITV+EVD  + KE   QR
Sbjct: 756 EVLKESFTIQLTKITKKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEGKEGHSQR 815

Query: 181 TSVFRRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRRLSMPIGEEESTFSTPN 226
           TS F RI P VARA VF+RLS+ E + +  Q T++  R S F+RL++   EE+       
Sbjct: 816 TSAFDRISPHVARAPVFERLSMTEAKRKDHQSTSNLDRRSAFQRLTITFKEEKGICQASM 875

[Close]

BLAST of Spg010446 vs. NCBI nr
Match: KAA0055957.1 (uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa])

HSP 1 Score: 140.2 bits (352), Expect = 3.8e-29
Identity = 101/305 (33.11%), Postives = 137/305 (44.92%), Query Frame = 0


Query: 1   GIKPNNADTNPFSEAESHFADAKFYMKSDNTGETIPAEIPLIKKNEKLNLE--------- 60
           G+K   AD+NPFSEAESHFADAKFY+K+D++ E +  E+PL+ + + L L+         
Sbjct: 135 GVKKVEADSNPFSEAESHFADAKFYLKNDSSPEVVSVEVPLVNREDNLQLKSLASKEPHK 194

Query: 61  ---------------------------------------------------PQADTRK-- 120
                                                              PQ   R+  
Sbjct: 195 SIGTFHSGKSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQGLKRRTK 254

Query: 121 ----------------EAVEDVEASDLK-------------------------KGLGYKS 180
                           + +   E   LK                         KGLGYKS
Sbjct: 255 DGFDPKAYKLMAKAGYDFITHTEFKSLKIHEQPKLSSTQKKLLREGHVIPMSRKGLGYKS 314

Query: 181 PKPVRITRRGKGKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN 203
           P+P+RITR+GK KV D NHITV+EVD  +EKE  +QRTS F RI P VARA VF+RLS+ 
Sbjct: 315 PEPIRITRKGKKKVVDNNHITVKEVDSMEEKEGDNQRTSTFDRISPHVARAPVFERLSMT 374

[Close]

BLAST of Spg010446 vs. NCBI nr
Match: KAA0042067.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK18009.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 138.7 bits (348), Expect = 1.1e-28
Identity = 112/338 (33.14%), Postives = 148/338 (43.79%), Query Frame = 0


Query: 1    GIKPNNADTNPFSEAESHFADAKFYMKSDNTGETIPAEIPLIK----------------- 60
            GIK   AD NPFSEAESHFADAKFY+K+DN+ E +  E+PL K                 
Sbjct: 682  GIKKVEADPNPFSEAESHFADAKFYLKNDNSPEAVSVEVPLGKASTSTRKSMILMDEKTS 741

Query: 61   ------------------------------------------------------------ 120
                                                                        
Sbjct: 742  NPPILRYVPLSRCKKGESPFVKSPQGLKVGDIEVLKESFTTPFTKITKQEIKIDLTEASL 801

Query: 121  ------------------------------KNEKLNLEPQ-ADTRKEAVEDVEASDL-KK 180
                                          K+ K++ +P+ + T+K+ + +  A  + +K
Sbjct: 802  PQSWTKDGFDPKAYKLMAKVGYDFTTHIEFKSLKIHEQPKLSSTQKKLLREGHAIPMSRK 861

Query: 181  GLGYKSPKPVRITRRGKGKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVF 230
            GLGYKSP+P+RITR+GK KV D NHITV+EVD  KEKE   QRTS F RI P VAR  VF
Sbjct: 862  GLGYKSPEPIRITRKGKEKVVDNNHITVKEVDSMKEKEGDGQRTSAFDRISPHVARTPVF 921

[Close]

BLAST of Spg010446 vs. NCBI nr
Match: KAA0039557.1 (uncharacterized protein E6C27_scaffold744G00270 [Cucumis melo var. makuwa] >TYK01742.1 uncharacterized protein E5676_scaffold775G00710 [Cucumis melo var. makuwa])

HSP 1 Score: 134.8 bits (338), Expect = 1.6e-27
Identity = 102/318 (32.08%), Postives = 139/318 (43.71%), Query Frame = 0


Query: 1   GIKPNNADTNPFSEAESHFADAKFYMKSDNTGETIPAEIPLIKKNEKLNL------EPQ- 60
           G+K   AD+NPFSE ESHFADAKFY+K+D++ E +  E+PL+ + + L L      EPQ 
Sbjct: 417 GVKKVEADSNPFSEVESHFADAKFYLKNDSSSEAVSVEVPLLNREDNLQLKSLTSKEPQK 476

Query: 61  ----------------ADTRK-------EAVEDVEASDL--------------------- 120
                           A  RK       E+ + ++  D+                     
Sbjct: 477 RIGTFHSGKSEASTSTAKKRKKGESPFVESPQGLKVGDIEVLKESFITPLIKITKQEIKI 536

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 537 DLTKASLPQRRTKDGFDPKAYKLMAKAGYDFTTHTEFKSLKIHEQPKLSSTQKKLLREGH 596

Query: 181 -----KKGLGYKSPKPVRITRRGKGKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPP 203
                +KGLGYKSP+P+RITR+GK KV D+NHITV+EVD  +E E   QRTS F RI P 
Sbjct: 597 VIPMSRKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEEYEGDSQRTSAFDRISPH 656

[Close]

BLAST of Spg010446 vs. NCBI nr
Match: KAA0056394.1 (uncharacterized protein E6C27_scaffold186G001420 [Cucumis melo var. makuwa] >TYK29124.1 uncharacterized protein E5676_scaffold120G002660 [Cucumis melo var. makuwa])

HSP 1 Score: 131.3 bits (329), Expect = 1.7e-26
Identity = 96/270 (35.56%), Postives = 134/270 (49.63%), Query Frame = 0


Query: 1   GIKPNNADTNPFSEAESHFADAKFYMKSDNT-------GETIPAEIP------------- 60
           G+K    D+NPFSEAESHFADAKFY+K+D++       GE+   E P             
Sbjct: 135 GVKKVETDSNPFSEAESHFADAKFYLKNDSSRKAVRKKGESPFVESPQGLKVGDIEVLKE 194

Query: 61  --------LIKKNEKLNL--------------EPQA------------------------ 120
                   + K+  K++L              +P+A                        
Sbjct: 195 SFTTPLTKITKQEIKIDLTEASLPQRRTKDGFDPKAYKLMAKAGYDFTTHIEFRRLKIHE 254

Query: 121 -----DTRKEAVEDVEASDL-KKGLGYKSPKPVRITRRGKGKVADTNHITVEEVDDSKEK 180
                 T+K+ + +  A  + +KGLGYKSP+P+RIT +GK KV D NHITV+EVD  +EK
Sbjct: 255 QLKLSSTKKKLLREGHAIPMSRKGLGYKSPEPIRITIKGKEKVVDNNHITVKEVDSMEEK 314

Query: 181 ESVDQRTSVFRRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRRLSMPIGEEES 199
           E   QRTS F RI P V RA VF+RLS+ E E +  Q T++  + S F+RL++   EE+ 
Sbjct: 315 EGDSQRTSAFDRISPHVTRAPVFERLSMTEAERKDHQSTSNVDQRSAFQRLTITFKEEKG 374

[Close]

BLAST of Spg010446 vs. ExPASy TrEMBL
Match: A0A5D3C8N8 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001250 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 6.2e-30
Identity = 104/296 (35.14%), Postives = 142/296 (47.97%), Query Frame = 0


Query: 1   GIKPNNADTNPFSEAESHFADAKFYMKSDNTGETIPAEIPLIKKNEKLNL---------- 60
           G K    D+NPFSEAESHFADAKFY+K+D++ E +  E+ L+ + +   L          
Sbjct: 636 GEKKVEVDSNPFSEAESHFADAKFYLKNDSSPEAVSIEVLLVNREDNFQLKSLASRKPHK 695

Query: 61  ----------EPQADTRK-------------------------------EAVEDVEASDL 120
                     E    T K                               E+ + ++  D+
Sbjct: 696 STETFHSGKNEASTSTAKSVILMNENTSNPPILRYVPLSRCKKGESPFVESPQGLKVGDI 755

Query: 121 ---------------KKGLGYKSPKPVRITRRGKGKVADTNHITVEEVDDSKEKESVDQR 180
                          KKGLGYKSP+P+RITR+GK KV D+NHITV+EVD  + KE   QR
Sbjct: 756 EVLKESFTIQLTKITKKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEGKEGHSQR 815

Query: 181 TSVFRRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRRLSMPIGEEESTFSTPN 226
           TS F RI P VARA VF+RLS+ E + +  Q T++  R S F+RL++   EE+       
Sbjct: 816 TSAFDRISPHVARAPVFERLSMTEAKRKDHQSTSNLDRRSAFQRLTITFKEEKGICQASM 875

[Close]

BLAST of Spg010446 vs. ExPASy TrEMBL
Match: A0A5A7UMY2 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00830 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.8e-29
Identity = 101/305 (33.11%), Postives = 137/305 (44.92%), Query Frame = 0


Query: 1   GIKPNNADTNPFSEAESHFADAKFYMKSDNTGETIPAEIPLIKKNEKLNLE--------- 60
           G+K   AD+NPFSEAESHFADAKFY+K+D++ E +  E+PL+ + + L L+         
Sbjct: 135 GVKKVEADSNPFSEAESHFADAKFYLKNDSSPEVVSVEVPLVNREDNLQLKSLASKEPHK 194

Query: 61  ---------------------------------------------------PQADTRK-- 120
                                                              PQ   R+  
Sbjct: 195 SIGTFHSGKSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQGLKRRTK 254

Query: 121 ----------------EAVEDVEASDLK-------------------------KGLGYKS 180
                           + +   E   LK                         KGLGYKS
Sbjct: 255 DGFDPKAYKLMAKAGYDFITHTEFKSLKIHEQPKLSSTQKKLLREGHVIPMSRKGLGYKS 314

Query: 181 PKPVRITRRGKGKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN 203
           P+P+RITR+GK KV D NHITV+EVD  +EKE  +QRTS F RI P VARA VF+RLS+ 
Sbjct: 315 PEPIRITRKGKKKVVDNNHITVKEVDSMEEKEGDNQRTSTFDRISPHVARAPVFERLSMT 374

[Close]

BLAST of Spg010446 vs. ExPASy TrEMBL
Match: A0A5A7TJZ7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003220 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 5.3e-29
Identity = 112/338 (33.14%), Postives = 148/338 (43.79%), Query Frame = 0


Query: 1    GIKPNNADTNPFSEAESHFADAKFYMKSDNTGETIPAEIPLIK----------------- 60
            GIK   AD NPFSEAESHFADAKFY+K+DN+ E +  E+PL K                 
Sbjct: 682  GIKKVEADPNPFSEAESHFADAKFYLKNDNSPEAVSVEVPLGKASTSTRKSMILMDEKTS 741

Query: 61   ------------------------------------------------------------ 120
                                                                        
Sbjct: 742  NPPILRYVPLSRCKKGESPFVKSPQGLKVGDIEVLKESFTTPFTKITKQEIKIDLTEASL 801

Query: 121  ------------------------------KNEKLNLEPQ-ADTRKEAVEDVEASDL-KK 180
                                          K+ K++ +P+ + T+K+ + +  A  + +K
Sbjct: 802  PQSWTKDGFDPKAYKLMAKVGYDFTTHIEFKSLKIHEQPKLSSTQKKLLREGHAIPMSRK 861

Query: 181  GLGYKSPKPVRITRRGKGKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVF 230
            GLGYKSP+P+RITR+GK KV D NHITV+EVD  KEKE   QRTS F RI P VAR  VF
Sbjct: 862  GLGYKSPEPIRITRKGKEKVVDNNHITVKEVDSMKEKEGDGQRTSAFDRISPHVARTPVF 921

[Close]

BLAST of Spg010446 vs. ExPASy TrEMBL
Match: A0A5D3BSG5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00710 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 7.6e-28
Identity = 102/318 (32.08%), Postives = 139/318 (43.71%), Query Frame = 0


Query: 1   GIKPNNADTNPFSEAESHFADAKFYMKSDNTGETIPAEIPLIKKNEKLNL------EPQ- 60
           G+K   AD+NPFSE ESHFADAKFY+K+D++ E +  E+PL+ + + L L      EPQ 
Sbjct: 417 GVKKVEADSNPFSEVESHFADAKFYLKNDSSSEAVSVEVPLLNREDNLQLKSLTSKEPQK 476

Query: 61  ----------------ADTRK-------EAVEDVEASDL--------------------- 120
                           A  RK       E+ + ++  D+                     
Sbjct: 477 RIGTFHSGKSEASTSTAKKRKKGESPFVESPQGLKVGDIEVLKESFITPLIKITKQEIKI 536

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 537 DLTKASLPQRRTKDGFDPKAYKLMAKAGYDFTTHTEFKSLKIHEQPKLSSTQKKLLREGH 596

Query: 181 -----KKGLGYKSPKPVRITRRGKGKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPP 203
                +KGLGYKSP+P+RITR+GK KV D+NHITV+EVD  +E E   QRTS F RI P 
Sbjct: 597 VIPMSRKGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEEYEGDSQRTSAFDRISPH 656

[Close]

BLAST of Spg010446 vs. ExPASy TrEMBL
Match: A0A5A7UMH1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G002660 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 8.4e-27
Identity = 96/270 (35.56%), Postives = 134/270 (49.63%), Query Frame = 0


Query: 1   GIKPNNADTNPFSEAESHFADAKFYMKSDNT-------GETIPAEIP------------- 60
           G+K    D+NPFSEAESHFADAKFY+K+D++       GE+   E P             
Sbjct: 135 GVKKVETDSNPFSEAESHFADAKFYLKNDSSRKAVRKKGESPFVESPQGLKVGDIEVLKE 194

Query: 61  --------LIKKNEKLNL--------------EPQA------------------------ 120
                   + K+  K++L              +P+A                        
Sbjct: 195 SFTTPLTKITKQEIKIDLTEASLPQRRTKDGFDPKAYKLMAKAGYDFTTHIEFRRLKIHE 254

Query: 121 -----DTRKEAVEDVEASDL-KKGLGYKSPKPVRITRRGKGKVADTNHITVEEVDDSKEK 180
                 T+K+ + +  A  + +KGLGYKSP+P+RIT +GK KV D NHITV+EVD  +EK
Sbjct: 255 QLKLSSTKKKLLREGHAIPMSRKGLGYKSPEPIRITIKGKEKVVDNNHITVKEVDSMEEK 314

Query: 181 ESVDQRTSVFRRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRRLSMPIGEEES 199
           E   QRTS F RI P V RA VF+RLS+ E E +  Q T++  + S F+RL++   EE+ 
Sbjct: 315 EGDSQRTSAFDRISPHVTRAPVFERLSMTEAERKDHQSTSNVDQRSAFQRLTITFKEEKG 374

The following BLAST results are available for this feature:

BLAST of Spg010446 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047672.1	1.3e-29	35.14	uncharacterized protein E6C27_scaffold115G001730 [Cucumis melo var. makuwa] >TYK...	[more]
KAA0055957.1	3.8e-29	33.11	uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa]	[more]
KAA0042067.1	1.1e-28	33.14	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK18009.1 retrotranspos...	[more]
KAA0039557.1	1.6e-27	32.08	uncharacterized protein E6C27_scaffold744G00270 [Cucumis melo var. makuwa] >TYK0...	[more]
KAA0056394.1	1.7e-26	35.56	uncharacterized protein E6C27_scaffold186G001420 [Cucumis melo var. makuwa] >TYK...	[more]

BLAST of Spg010446 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg010446 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C8N8	6.2e-30	35.14	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00125...	[more]
A0A5A7UMY2	1.8e-29	33.11	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7TJZ7	5.3e-29	33.14	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5D3BSG5	7.6e-28	32.08	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UMH1	8.4e-27	35.56	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Spg010446 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg010446.1	Spg010446.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process