Spg010427 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg010427
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSWIM-type domain-containing protein
Locationscaffold5: 12433368 .. 12441478 (+)
RNA-Seq ExpressionSpg010427
SyntenySpg010427
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGGGAACATAGTGCACGGTCTGAATGGTATAAAATATGACGTCGAACCATCTGTTCAGTTCAATGTTCCTCGTGATATTGCATACAACCAATTCATTCAATGGTTATGCAATGGATTGTCGATTGATAGAACTGAAGGGTTGGATGTCATCTTTAGATATGACACTATTGGGTTTGAAGGGTCTACTTATTATGTTCCTGTCCCGTTACGAAGTGAGATTGATTTTAGGTTTATGATGAACCTTGCTCTACCTCTTCCTAATAGAGTAGAGCTCTTTATTCCTCGCCAAAACATCATTCATATGGATCCAAATAGACCTGTTGAACACGTATCTGAACCTGATTATACACCGGAGGATGAAGCTGAAGATGACCCGAATGTTGATAATGTTGATGAAGTGGGTGTGGATAATTTGGATGGAGAGAATGTAGACTCTACCCTGGTCACGAATGAAGACGTTGGAACAGAACCTGACAATGAAAGCACTGAAGGACCGTCTGATGATGATGGAGAGGAAGAGCCTCAGATGTATGGCGAGCACGAAATCCCAAAGTTTTTCACCTAACTGGACATGGCAGCCATCGATTCACTTCCTAACACAGGTGTTGAAAAAGAAGTAAGGGGAGATGATTTGTTGGTAAAAGGGATGATCTACAAAACGAAAAATTATTTGAAGAACGCTGTAAAGAGTTATTCATCATCTGTCATCAATATTTTGATGTTGTTGAAACGAACAAAAAGGTATGGGCAGTTAAGTGCAGACGGTATGGTCAAGGGTGTATGTGGCGACTTCGTGGCTCTTGGCTAAAGAAGCATGGGTGTTTTGAAATAAAACAATACAACGGGCCTCATTCGTGTGTATACGCAAGGCTGGGTCAAGATCATAGACAACTTGATGCCAACCTTATTGCTGCTGAGGTGCATAACGTTGTTAAGTGTAACCCATCAGTAGACATAAGAACATTGCAGGAAATCATATTGACGAAATGTGGATATACTGTGAAATACTCAAAAGTATGGGATGGAAAAAGAAAGGTCATACATAACATATTCGGTGATTGGGACGAATCGTACGAGTTGTTGCCATGGTGGACCAACATACTACAGCTCACCAATCCTGGCACACAAGTTGCGTGGAGGTTACATGATGTGGTGGACAAAAGAAATGAAAAAATATTTCATTGTGTTTTTTGGGCATTTGGTCCAGTTATCGAGAGATTCAAGCACTGTCGACCGTTACTTCAAATTGACGAAACGCACTTTTTACGGAAAGTACAAGGGAAAAGTATTGATTGCTACATCAGTCGATGCCGACCGACACATATACCCTGTGGCGTATGCTATTGTACCAGAGGAGAGTTCCGATACATGGGGTTGGTTTCTACGCCTAATTCGACAACATGTGGTTGGTGAGAAAGACGGAATATGTCTTATTTTGGACAGGCACAAGGGTATTATCTCAGCGATCCGGAATAAGGATAACGGTTGGACAGATGCACACCATCGATTTTGTTTGCGGCATCTTGTAAGCAACTTCAATGAACGGTACAAAGATAAGACGTTGAAGAAGCTGGTGTACCGAGCAGATTCAAAGTTTAATGTCGATAAGTTCAAAGAATGCATGCAGGAGCTTCAAACAATTAACAAAGACTGCATGAGATTCTTCACTTCCTTGGATCCTATACAGTGGACACAGTCACATGACGGTGGACACCGTTATGGTTGGTTGACCAGGAACGTTGCGGAGTGCATTAATGGCGTTCTGAAGGGAGCGAGGAAGTTGCCAATCACTGCACTAGTTCAAGCAACGTTCTACCGTACAATTCAATATTTTGCCACTAGACGGCATGAAATTACAAAATCATTGGAGGCTGGACAACCCTTCACAAGGTAAAGAATTTCCATAAAAGCACAATGTTCATTCCTACTCCTCTATGAAACTCGATAATAATTTGTGTCCAATTGATAGGTATGTAATCGAAATGTTAACTCCATGGGAGGTAGGGGTGTTCATCGAATCCGATGACCCGAAAAACCCGGACAACCCAACCCAAATTATAAGGGTTGGTTGGGTTAGAATGCATTTTGGGTTGGGTTGGGTTGAAAAATATGGGAACCGGTCGGTTCGGTTCGGGTAGCGGGTTCAAGAAGTTCATTTTCTGTTCAACCCGAACCGAACCGACAATATATATATATATATTCTAATTTTAGGGCAATCTGATTCTGAAGACTGAAATTGAATCACACGCCGCACGCCACACCCGCAGCCCTCCATTTTTCTTCTTCTTCGTTTTCTTTTCACGCCCCTGCCTCGCCTCGCCTCTTCTTCATTTTTCTTCTTCTGCTGTAGTGTTGTCCATAAAACTTCTTGTTTGACGCCACCGGCAGTACATTGAAATATTGACCACTTCTTTTTTCTTCTTTTTTCACGCCGCCGGCAGTGCCCTTTCTTCGTTTTTCTTCTTCTTCGTTTTTCAAGCCGCCGGCAGTGCCTCTTCTTCGTGACGCCGGTTCCTCCTTTCACTTCACTGTCGTCGTAACGCAGGTCAGTTTAGTTTTACATAACTTTCTCCTTTCTTTATTTTTCTTTTTTGACACAAACTGCATTTGACCTTAGGAACAAAACTTAAGCACTAAAATTGGAAGGATCTTTTAAAAAAAATCCTAACCCTCGTTCATCTTAGGAACAAAACTTAGCCCACTGAAAACTGGAAGCATCTTTTAAAAAAAATTCAGTTTAAGAACTAAAATAAGGTGTTTTGCGTCATACTTCACTTATGCAGCTTAGGTGTTTGTTTTAATGTCCCAATGGAGAATTTTGCTGACCCATAAGCCTAAGACTGTGAAGTTTGATTCTTTGGTGCATTTTTCTGGTTTCATGAAGAAACCCATTTCATTCTTCTGTTTGGTGTTGTGTGAAAGTGTTGTTTTGTCACTCTGATACTTATGGAGTACCCCATGAATGCGAGTCCTTGAATGGATAGAGAAAGAACAAGTTGCTCTTTTTTTTTGTTTCTGCAGCTGTGGGGATACCAATTGTGAAAACTTATTTAAGTCTTTGGTGATGACAGATGTTATGTAAATATTGTGTTGTAAAGGCACTTTTTTAAATACATAGTAGTTGCATCAATGATTGTCTGATTTATTTTGTTCAATTGTGAGTTCAAATGTACAGTATCTGTAACATTGATTAAAACTAGTTTACTCTCAGCTTGTTTGACTTCGAGATGAACTGAAAGCGAAGAAGCACTTGAATCAATATTTGTTACTATATTTATGGTACATATTGAATTTATAATCTGTTAATGGCTCTACTGTACTATGTTTACTTTGCAGATCGTCAATAATCAATTAATCACCACGGAGTCGGACACAGAAGAATCACCCCTGTCTAATTTCATTGTGATTTAAAGTTATCTAAGTTATATTAAAACTCCAGTTTCTGCCATAAAACTTGAATCAAATCAGAAAATGAAAATAAAACTTGTCTAAGTTATACTAAGTTATTATAATTTTTTTGTATTGTGTATATACTTGAGATTGAAATATGTTTGTGTATTTTTTTTATCTATGGGTTGTTTGTTTGTGTATTTTTATTTATGAGATTGTTTGTGTTAGTTGGTTGTTATTTATTTTAGTTTAATTTATTTTATAGATGGATAACAGTAGTGGAAATGCAAGTGGTAATGAATGTAATGACGAACTCCTGCTCCCGAAATTAGCAAGACTCCTACTCCTAGTCCTAAACCACCATTACCTTTACCTCCAAAGTCTAATAAAAAGAGACCTAGTAAACAAACTTCTTCTGTATGGGATCATTTCACAAAAATTGAAGTGGGTGCTAATGATGGAGCTAGGTGTAAATGTAATTATTGTGACAAGGATTATGCATGCGACACTAATATATAGTTGTGGAACTAGCACTTTATGGGAGCACTTAAGAAATCAATGTAAAAAATATCCATATAGAGAACAAGAAAAAGGACAAACCACCTTAACACTTGTTCCTTCTAATGATGGAAAAGGAGGTAGTGCTAGTAATTTTGTAACAACATTGTTTAGTCAACAAGCCTGTAGAACAACATGTGCTAAGATGATAATTATTGATGAGCTGCCTTTCAGATTCGTAGAGAATGAGGGCTTTAGACACTTTTGTAGTATTTCGTGTCCTAAGTTTGACATTCCATCGAGAGTAACAGTAGCTAGAGATGTTTTTCAGCTTTATCTTGAAGAGAAAAAATAGTTGAGAACATTTTTAGTTAAAAACTCTCAAAGGGTTTGTCTTACAACTGACACTTGGACTTCATTAAAAAATGTTAACTACATGGTAATCACTGCACATTTTATTGATTCTGAATGGCGCCTGAATAAGAAGATTTTGAACTTTTGTCATGTTGCTAATCATAAGGGAGAGACTATTGGTAAGGTGATTGAGACTTGTTTGTTGGAATGGGGGATTGACAAAGTTTTTTCCATCACTGTTGATAATGCAAGTTCTAATGATGTGGCTATTTCTTATATTAAGAGAAGATTGAAAAGCTGGAAATCTGTTGTCCTAGATGGAGAACTATTACACATGAGGTGTTGTGCTCACATAATTAACCTCATAGTGAATGATGGGCTGAAGGACATGCATGAATCTATTGCTAGTGTTCGTAATGCAGTAAGATATGTTCGATCATCACCTAAAAGATTGACAACATTTAAAGCTTGTGTGAAACAAGAGAAAGTTGAGTGTAAGGCTCTTGTTTGTTTAGATGTGTCAACTAGGTGGAATTCTACTTATTTAATGTTTGATCATGCAATCAAATTTGAGAAAGCTTTTAAAATTTTGGAGGAAGAGAAAACGGAGTCAGATTTTGTTGATTATTTTGAGGAAGATGACCATGGAAATAAAATATTGGGGCCACCAACTTCATTTGATTGGGAAAATGTGAAGGTGTTTGTTAAGTTCTTGAAGAAGTTTTATGATGTCACTAATAAAATAAGTGGTTCTTTGTATGTGACTTCTAATGTTGGTTTTCATCAACTTTATGGTATTCAATTTAGTTTAATGAAGTGGAGCAGAAATCCTTACTCTATTCTATGCAATATGGCTTCCAATATGAAGAAAAAGTTTGACAAGTATTGGGGTTCAGTTGAAAATATTAATAAGTTGATATTTATTGTTATGGTGCTTGATCCTCGTTACAAGTTGGATTATGTGTCGTATTCCTTTTCTACTGTTTATGACGCTAGTGTGGTTAAAGAGATGGTTGAGAATGTCAAGATATATTTATATCGTCTGTATGAATTTTACAAATCTCGTGACAAAACCAAACAAGGTAATATTAGTACTACTACTAATAGTGGTGGTGGTTCTCCAACAATCAAGCGTTGTCACTAGTATAGACACTGTAGATGATGAAGATACTAATATACATACGGGTTATAAGAGAAGAAGAGAAGAGGAGAGTTCATTGGAGGTGGAGAATGACTTGGATCGATATTTGTCTGACAAGAAGGAGGAACTTAATGATAGTTTTGATGTTTTGTATTGGTGGAAAGTGAATGGTCATAGATACCGCATTTTATCAAAAATTGCCCAAGATGTTTTGGTTGTTCCTGTGTCTACTGTGGCTTCTGAATCTGCATTTAGTACGGGGGGTCGGGTCCTTGATTCCTTTAGAAGTTCTTTGACTCCTAAAACGGTGGAAGATTTGATATGTACGCAAAATTGGATTCGAGACAACTCAATGTTATTAGATCTTCCTCCACAACTTGAAGAGTTAGAGACTTATGATAAGATTGAGTCAGGTAATTAAATTATTTTCTAATTGTTGTGGATCTAAACTCTAAAGTATACTATGATCGAATAATATATATTTTGTTCTGTTTGGTTTGGTTTATTTTTTCAGATATTACTTCGCCCTCTGTTGTTGGAAAATAATGGATTCAAGCGGATTGATGATATGAAGAGTAAGCTTTTCTATCATTATATTGATAAATATCCAATTCTTTTGTTATGTACAATTCTTTTTAATCTTAAATTTTGTTTGTTGTATTTGTACTTTCAGGACTTCGCAATAAAAGGTGAAAGCTCAAGAATTAATATTTTGCTCATGGTGGTGTCAATTCTCTTGTTGTAATAGAATATTTGTTGTATTATTGAACTTTTTTTTTTAATGATTATAGTTCATTTTCAAGTTTATTGTGATGATTGTAATTGTAAGAACGATGTTTGCTATCTAGGTTAAAGACATTTGAATGTTTTTAATTATTAGTTTTTTATATGTATGTTCAGTATTCATATACAATTTGAGAGCTACAACTCATTTAGCAAAGAACTTATTTGAAAGAAGCTTATGGGTTTTTAAATTTAATTTCAGCCAGACCAAGATGCTCTCATTTAGTAATTTTAATTTAATTTCAGCAAGAATGATGTTTTTATTTTTAATAAATAAATTTAAAAAAAAAAACACACAACCCGATGACCCAACCCGAACAAATTGGGTTGGGTTGGGTTGGGTTACCTTCATAAATGGAACCGATTGGGTTGGGAGTTTTACCAACCCGAATTTTTGGGTTGGTCCAAAATTGACCCCTAACCCGGCCCAAACCAACCCGTGTACACCCCTAATGGGAGGCAAGGGCGAATGGTTTCTCAGTCAATGTGTTTGACTACGATTTGGGTATATGCGACGTCACGACTTCAATAGACCCAATATCGATGAAAGGTGGAAAAAAACATCACGTGAGGTTATATGAGGAGTCGTGTGTTTGCAATAAGTGGAAAACATATCGAATTTCATGTTCCCACGCTATCGCTGCTTGCAAACGAATAGGCATCGATTACATTCAATTTGTTCAAGATCCCTATGCCCTACCAAATTATTTGGCATGCTATGCACTGCAGTTTACACCAATCCCTGATCAGAGTTGTTGGCCTGATCCAAACTTCCCGAAAGTGTATCCTAACGTCGAGTTGATGAGAGGGAAGGGTCGACCATGCAGTTCTCGTATAAGAAACGAGATGGATTGGAAGGAGCCAATGGTTAAAACACGATGTGGAGTATGTAGGCAGGAAGGGCATAACCGAAGAAATTGTCCTCATCGTGCAGCTACAAAGCTGAATTAGTATTGAACTGTTGTTTACATTTTTTTTTTCATTATGTACAAAATATTTATAACATAAGTGCTAAACTTTTTTTTGATATATAAAGCATATTATTCATTGTGTGCAAAATTTTCCTTTCTTTTAATATCCGTGTAACTAATACTTACTCTTAATATACTTAAATGTCTATAGATGGGAGATGATATTACTACAGGTCCGTATGACCCATCTGTTCTACACCTTCAAGTCTGGGATGATGTCTACTACAATGCCATGCATTGTAGACGTCATAAGGCTATCCTCAAAAGGTTTTCGAGCCCAGACCCCCGAATTGAGCCATATCTACGAGCATCCGGGTTTTATGGTGTGTCATGCATTCAATTCATCCAGCTAGATTGGCACTTAATTACTGCGGTGGTGGAGCGCTGAAGACAGGAGACACACACATTTCATCTTCCACATGGAGAGTGTACTATCACTCTACAAGACGTTGCTGTATAGTTTGGCTTGCCTAATGAGGGGAAGGCGCTAACAGGGTCAGTAAACAAAGACTGGCCAACTGTTTGTTAAGACTTAATGGGGGTTCATGTCCCCAATAGGGTATTGGATGAAGCTCGTCTGAGCCTGTCTTGGTTAGCTACTCAATTCAATAATTTCATCTATCTACCAGACGACGCCGAGGAAGAAGACCTTCGACGTTATGCCCGAGCATATATATTATCATTGATCGGAGGCATGTTATTTATCGACAAGTCTGGCAGTAGGGTGCACCTAATGTACCTACCCCTATTGGAAGATTTTGATGAAGCTGGGACGTATAGCTGGGTGTAGGATGTCTGGCGTTGTTATACAGGAACCTCTGCAAGGGTTTAGTTATAGATGCCAGAGAGTTGGGCGGATCACTTATCCTGCTTCAATTGTGGACGTGGGACCGGTTCCCTACTGTAGCTCCCCGACGACGGCACCGGTATGAAAACCATCCAGGAGATCGGCCATTGGCAGTTCGGTAA

mRNA sequence

ATGAATGGGAACATAGTGCACGGTCTGAATGGTATAAAATATGACGTCGAACCATCTGTTCAGTTCAATGTTCCTCGTGATATTGCATACAACCAATTCATTCAATGGTTATGCAATGGATTGTCGATTGATAGAACTGAAGGGTTGGATGTCATCTTTAGATATGACACTATTGGGTTTGAAGGGTCTACTTATTATGTTCCTGTCCCGTTACGAAGTGAGATTGATTTTAGGTTTATGATGAACCTTGCTCTACCTCTTCCTAATAGAGTAGAGCTCTTTATTCCTCGCCAAAACATCATTCATATGGATCCAAATAGACCTGTTGAACACGTATCTGAACCTGATTATACACCGGAGGATGAAGCTGAAGATGACCCGAATGTTGATAATGTTGATGAAGTGGGTGTGGATAATTTGGATGGAGAGAATGTAGACTCTACCCTGGTCACGAATGAAGACGTTGGAACAGAACCTGACAATGAAAGCACTGAAGGACCGTCTGATGATGATGGAGAGGAAGAGCCTCAGATGTATGTAATCGAAATGTTAACTCCATGGGAGGTAGGGGTGTTCATCGAATCCGATGACCCGAAAAACCCGGACAACCCAACCCAAATTATAAGGCCGCCGGCAGTGCCTCTTCTTCGTGACGCCGGTTCCTCCTTTCACTTCACTGTCGTCGTAACGCAGATCGTCAATAATCAATTAATCACCACGGAGTCGGACACAGAAGAATCACCCCTATGGATAACAGTAGTGGAAATGCAAGTGATATTACTTCGCCCTCTGTTGTTGGAAAATAATGGATTCAAGCGGATTGATGATATGAAGATCAATGTGTTTGACTACGATTTGGGTATATGCGACGTCACGACTTCAATAGACCCAATATCGATGAAAGGTGGAAAAAAACATCACGTGAGGTTATATGAGGAGTCGTGTGTTTGCAATAAGTGGAAAACATATCGAATTTCATGTTCCCACGCTATCGCTGCTTGCAAACGAATAGGCATCGATTACATTCAATTTGTTCAAGATCCCTATGCCCTACCAAATTATTTGGCATGCTATGCACTGCAGTTTACACCAATCCCTGATCAGAGTTGTTGGCCTGATCCAAACTTCCCGAAAGTGTATCCTAACGTCGAGTTGATGAGAGGGAAGGGTCGACCATGCAGTTCTCGTATAAGAAACGAGATGGATTGGAAGGAGCCAATGGTTAAAACACGATGTGGAATGGGAGATGATATTACTACAGGATGTCTGGCGTTGTTATACAGGAACCTCTGCAAGGGTTTAGTTATAGATGCCAGAGAGTTGGGCGGATCACTTATCCTGCTTCAATTGTGGACGTGGGACCGGTTCCCTACTGTAGCTCCCCGACGACGGCACCGGTATGAAAACCATCCAGGAGATCGGCCATTGGCAGTTCGGTAA

Coding sequence (CDS)

ATGAATGGGAACATAGTGCACGGTCTGAATGGTATAAAATATGACGTCGAACCATCTGTTCAGTTCAATGTTCCTCGTGATATTGCATACAACCAATTCATTCAATGGTTATGCAATGGATTGTCGATTGATAGAACTGAAGGGTTGGATGTCATCTTTAGATATGACACTATTGGGTTTGAAGGGTCTACTTATTATGTTCCTGTCCCGTTACGAAGTGAGATTGATTTTAGGTTTATGATGAACCTTGCTCTACCTCTTCCTAATAGAGTAGAGCTCTTTATTCCTCGCCAAAACATCATTCATATGGATCCAAATAGACCTGTTGAACACGTATCTGAACCTGATTATACACCGGAGGATGAAGCTGAAGATGACCCGAATGTTGATAATGTTGATGAAGTGGGTGTGGATAATTTGGATGGAGAGAATGTAGACTCTACCCTGGTCACGAATGAAGACGTTGGAACAGAACCTGACAATGAAAGCACTGAAGGACCGTCTGATGATGATGGAGAGGAAGAGCCTCAGATGTATGTAATCGAAATGTTAACTCCATGGGAGGTAGGGGTGTTCATCGAATCCGATGACCCGAAAAACCCGGACAACCCAACCCAAATTATAAGGCCGCCGGCAGTGCCTCTTCTTCGTGACGCCGGTTCCTCCTTTCACTTCACTGTCGTCGTAACGCAGATCGTCAATAATCAATTAATCACCACGGAGTCGGACACAGAAGAATCACCCCTATGGATAACAGTAGTGGAAATGCAAGTGATATTACTTCGCCCTCTGTTGTTGGAAAATAATGGATTCAAGCGGATTGATGATATGAAGATCAATGTGTTTGACTACGATTTGGGTATATGCGACGTCACGACTTCAATAGACCCAATATCGATGAAAGGTGGAAAAAAACATCACGTGAGGTTATATGAGGAGTCGTGTGTTTGCAATAAGTGGAAAACATATCGAATTTCATGTTCCCACGCTATCGCTGCTTGCAAACGAATAGGCATCGATTACATTCAATTTGTTCAAGATCCCTATGCCCTACCAAATTATTTGGCATGCTATGCACTGCAGTTTACACCAATCCCTGATCAGAGTTGTTGGCCTGATCCAAACTTCCCGAAAGTGTATCCTAACGTCGAGTTGATGAGAGGGAAGGGTCGACCATGCAGTTCTCGTATAAGAAACGAGATGGATTGGAAGGAGCCAATGGTTAAAACACGATGTGGAATGGGAGATGATATTACTACAGGATGTCTGGCGTTGTTATACAGGAACCTCTGCAAGGGTTTAGTTATAGATGCCAGAGAGTTGGGCGGATCACTTATCCTGCTTCAATTGTGGACGTGGGACCGGTTCCCTACTGTAGCTCCCCGACGACGGCACCGGTATGAAAACCATCCAGGAGATCGGCCATTGGCAGTTCGGTAA

Protein sequence

MNGNIVHGLNGIKYDVEPSVQFNVPRDIAYNQFIQWLCNGLSIDRTEGLDVIFRYDTIGFEGSTYYVPVPLRSEIDFRFMMNLALPLPNRVELFIPRQNIIHMDPNRPVEHVSEPDYTPEDEAEDDPNVDNVDEVGVDNLDGENVDSTLVTNEDVGTEPDNESTEGPSDDDGEEEPQMYVIEMLTPWEVGVFIESDDPKNPDNPTQIIRPPAVPLLRDAGSSFHFTVVVTQIVNNQLITTESDTEESPLWITVVEMQVILLRPLLLENNGFKRIDDMKINVFDYDLGICDVTTSIDPISMKGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFPKVYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGMGDDITTGCLALLYRNLCKGLVIDARELGGSLILLQLWTWDRFPTVAPRRRHRYENHPGDRPLAVR
Homology
[Close]
BLAST of Spg010427 vs. NCBI nr
Match: RVW52006.1 (hypothetical protein CK203_068088 [Vitis vinifera])

HSP 1 Score: 151.8 bits (382), Expect = 1.5e-32
Identity = 71/136 (52.21%), Postives = 87/136 (63.97%), Query Frame = 0 

Query: 280 NVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIG 339
           N+F     I +VTT+     M KG     V+L E +C CNKW+++ I CSH +A C R  
Sbjct: 637 NIFHRSNEIFEVTTAPHGFHMDKGNNIQIVKLKERTCTCNKWQSFGIPCSHVLAVCARAR 696

Query: 340 IDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFPKVYPNVELMRGKGRPCSSRIR 399
           ID  QFV   Y +  Y  CY  QF PIP Q+ WP+PNFP V+PN  L+R KGRP SSRIR
Sbjct: 697 IDSWQFVDKHYRMDVYACCYTPQFNPIPHQAYWPEPNFPIVHPNPNLVRDKGRPRSSRIR 756

Query: 400 NEMDWKEPMVKTRCGM 415
           NEMDW+EP VK RCG+
Sbjct: 757 NEMDWREPSVKLRCGL 772

[Close]
BLAST of Spg010427 vs. NCBI nr
Match: RVX19406.1 (hypothetical protein CK203_008540 [Vitis vinifera])

HSP 1 Score: 151.8 bits (382), Expect = 1.5e-32
Identity = 71/136 (52.21%), Postives = 87/136 (63.97%), Query Frame = 0 

Query: 280 NVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIG 339
           N+F     I +VTT+     M KG     V+L E +C CNKW+++ I CSH +A C R  
Sbjct: 610 NIFHRSNEIFEVTTAPHGFHMDKGNNIQIVKLKERTCTCNKWQSFGIPCSHVLAVCARAR 669

Query: 340 IDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFPKVYPNVELMRGKGRPCSSRIR 399
           ID  QFV   Y +  Y  CY  QF PIP Q+ WP+PNFP V+PN  L+R KGRP SSRIR
Sbjct: 670 IDSWQFVDKHYRMEVYACCYTPQFNPIPHQAYWPEPNFPIVHPNPNLVRDKGRPRSSRIR 729

Query: 400 NEMDWKEPMVKTRCGM 415
           NEMDW+EP VK RCG+
Sbjct: 730 NEMDWREPSVKLRCGL 745

[Close]
BLAST of Spg010427 vs. NCBI nr
Match: RVW92351.1 (hypothetical protein CK203_032440 [Vitis vinifera])

HSP 1 Score: 151.0 bits (380), Expect = 2.6e-32
Identity = 70/137 (51.09%), Postives = 87/137 (63.50%), Query Frame = 0 

Query: 279 INVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRI 338
           +N+F     I +VTT+     M KG     VRL E +C CNKW+++ I CSH +  C R 
Sbjct: 578 VNIFHRSNEIFEVTTAPHGFHMDKGNNIQIVRLKERTCTCNKWQSFGIPCSHVLVVCTRA 637

Query: 339 GIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFPKVYPNVELMRGKGRPCSSRI 398
            ID  QF+   Y +  Y  CY  QF PIPDQ+ WP+PNFP V+ N  L+R KGRP SSRI
Sbjct: 638 RIDSWQFIDKHYRMDVYACCYTPQFNPIPDQAYWPEPNFPIVHHNPTLVRDKGRPRSSRI 697

Query: 399 RNEMDWKEPMVKTRCGM 415
           RNEMDW+EP VK RCG+
Sbjct: 698 RNEMDWREPSVKVRCGL 714

[Close]
BLAST of Spg010427 vs. NCBI nr
Match: CAN83188.1 (hypothetical protein VITISV_040866 [Vitis vinifera])

HSP 1 Score: 147.9 bits (372), Expect = 2.2e-31
Identity = 68/191 (35.60%), Postives = 112/191 (58.64%), Query Frame = 0 

Query: 279 INVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRI 338
           I +F  +  + DV+T++    M KG KK  +++ E +  CNKW+++ +SCS+ +  C   
Sbjct: 139 ITIFHQENEVFDVSTNVHGFHMDKGNKKQIIKIKEGTYTCNKWQSFGLSCSYVLIVCVYA 198

Query: 339 GIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFPKVYPNVELMRGKGRPCSSRI 398
            ++  +FV   Y + N+ ACYA +F+PIP +   P P+FP ++P   ++R   RP SS I
Sbjct: 199 RLNNWKFVDSYYRIENFAACYAPKFSPIPHEDYKPKPDFPILHPVPTMLREHERPRSSCI 258

Query: 399 RNEMDWKEPMVKTRCGMGDDIT-----TGCLALLYRNLCKGLVIDARELGGSLILLQLWT 458
           +NEMDW+ P VK +CG    ++     + CL  LY  +C+   +   ++ G  ILLQLW 
Sbjct: 259 QNEMDWRXPSVKVKCGACKVLSEYSWGSVCLVWLYSEMCRASQVQTCDIIGPPILLQLWA 318

Query: 459 WDRFPTVAPRR 464
           W+RFP +  ++
Sbjct: 319 WERFPCIVHKK 329

[Close]
BLAST of Spg010427 vs. NCBI nr
Match: XP_030950142.1 (uncharacterized protein LOC115974062 [Quercus lobata])

HSP 1 Score: 132.1 bits (331), Expect = 1.3e-26
Identity = 57/125 (45.60%), Postives = 82/125 (65.60%), Query Frame = 0 

Query: 279 INVFDYDLGICDVTTSIDP-ISMKGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRI 338
           + VF ++ G+ +V T I+P  + +G  +H V L + +C C KW+ Y+I CSH I  CK  
Sbjct: 268 VTVFSHENGLFEVRTPINPNFAYRGNHRHEVNLRQNTCSCKKWQVYKIPCSHVIVVCKYQ 327

Query: 339 GIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFPKVYPNVELMRGKGRPCSSRI 398
           GI  +Q++   Y L   +ACYAL+F  +PD   W +PNFP +YPNV+L R KGRP ++R+
Sbjct: 328 GISAMQYIDRCYHLEEQVACYALRFRTVPDSVHWNEPNFPVLYPNVKLRREKGRPRTTRL 387

Query: 399 RNEMD 403
           RNEMD
Sbjct: 388 RNEMD 392

[Close]
BLAST of Spg010427 vs. ExPASy TrEMBL
Match: A0A438KDW5 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_008540 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 7.5e-33
Identity = 71/136 (52.21%), Postives = 87/136 (63.97%), Query Frame = 0 

Query: 280 NVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIG 339
           N+F     I +VTT+     M KG     V+L E +C CNKW+++ I CSH +A C R  
Sbjct: 610 NIFHRSNEIFEVTTAPHGFHMDKGNNIQIVKLKERTCTCNKWQSFGIPCSHVLAVCARAR 669

Query: 340 IDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFPKVYPNVELMRGKGRPCSSRIR 399
           ID  QFV   Y +  Y  CY  QF PIP Q+ WP+PNFP V+PN  L+R KGRP SSRIR
Sbjct: 670 IDSWQFVDKHYRMEVYACCYTPQFNPIPHQAYWPEPNFPIVHPNPNLVRDKGRPRSSRIR 729

Query: 400 NEMDWKEPMVKTRCGM 415
           NEMDW+EP VK RCG+
Sbjct: 730 NEMDWREPSVKLRCGL 745

[Close]
BLAST of Spg010427 vs. ExPASy TrEMBL
Match: A0A438EWG2 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_068088 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 7.5e-33
Identity = 71/136 (52.21%), Postives = 87/136 (63.97%), Query Frame = 0 

Query: 280 NVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRIG 339
           N+F     I +VTT+     M KG     V+L E +C CNKW+++ I CSH +A C R  
Sbjct: 637 NIFHRSNEIFEVTTAPHGFHMDKGNNIQIVKLKERTCTCNKWQSFGIPCSHVLAVCARAR 696

Query: 340 IDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFPKVYPNVELMRGKGRPCSSRIR 399
           ID  QFV   Y +  Y  CY  QF PIP Q+ WP+PNFP V+PN  L+R KGRP SSRIR
Sbjct: 697 IDSWQFVDKHYRMDVYACCYTPQFNPIPHQAYWPEPNFPIVHPNPNLVRDKGRPRSSRIR 756

Query: 400 NEMDWKEPMVKTRCGM 415
           NEMDW+EP VK RCG+
Sbjct: 757 NEMDWREPSVKLRCGL 772

[Close]
BLAST of Spg010427 vs. ExPASy TrEMBL
Match: A0A438I6L2 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_032440 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-32
Identity = 70/137 (51.09%), Postives = 87/137 (63.50%), Query Frame = 0 

Query: 279 INVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRI 338
           +N+F     I +VTT+     M KG     VRL E +C CNKW+++ I CSH +  C R 
Sbjct: 578 VNIFHRSNEIFEVTTAPHGFHMDKGNNIQIVRLKERTCTCNKWQSFGIPCSHVLVVCTRA 637

Query: 339 GIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFPKVYPNVELMRGKGRPCSSRI 398
            ID  QF+   Y +  Y  CY  QF PIPDQ+ WP+PNFP V+ N  L+R KGRP SSRI
Sbjct: 638 RIDSWQFIDKHYRMDVYACCYTPQFNPIPDQAYWPEPNFPIVHHNPTLVRDKGRPRSSRI 697

Query: 399 RNEMDWKEPMVKTRCGM 415
           RNEMDW+EP VK RCG+
Sbjct: 698 RNEMDWREPSVKVRCGL 714

[Close]
BLAST of Spg010427 vs. ExPASy TrEMBL
Match: A5BFC6 (PMD domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_040866 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.1e-31
Identity = 68/191 (35.60%), Postives = 112/191 (58.64%), Query Frame = 0 

Query: 279 INVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYEESCVCNKWKTYRISCSHAIAACKRI 338
           I +F  +  + DV+T++    M KG KK  +++ E +  CNKW+++ +SCS+ +  C   
Sbjct: 139 ITIFHQENEVFDVSTNVHGFHMDKGNKKQIIKIKEGTYTCNKWQSFGLSCSYVLIVCVYA 198

Query: 339 GIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWPDPNFPKVYPNVELMRGKGRPCSSRI 398
            ++  +FV   Y + N+ ACYA +F+PIP +   P P+FP ++P   ++R   RP SS I
Sbjct: 199 RLNNWKFVDSYYRIENFAACYAPKFSPIPHEDYKPKPDFPILHPVPTMLREHERPRSSCI 258

Query: 399 RNEMDWKEPMVKTRCGMGDDIT-----TGCLALLYRNLCKGLVIDARELGGSLILLQLWT 458
           +NEMDW+ P VK +CG    ++     + CL  LY  +C+   +   ++ G  ILLQLW 
Sbjct: 259 QNEMDWRXPSVKVKCGACKVLSEYSWGSVCLVWLYSEMCRASQVQTCDIIGPPILLQLWA 318

Query: 459 WDRFPTVAPRR 464
           W+RFP +  ++
Sbjct: 319 WERFPCIVHKK 329

[Close]
BLAST of Spg010427 vs. ExPASy TrEMBL
Match: A5B5G3 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_019818 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 8.0e-27
Identity = 69/162 (42.59%), Postives = 97/162 (59.88%), Query Frame = 0 

Query: 254 VEMQVILLRPLLLENNGFKRIDDMKINVFDYDLGICDVTTSIDPISM-KGGKKHHVRLYE 313
           +EM  + ++   LE    K +D + + +F       +V T++    M KG  K  V+L E
Sbjct: 593 LEMCTLRMQLKNLEEPRPKLVDTL-VTIFHRIHETFEVITALHGFHMDKGRNKQVVKLNE 652

Query: 314 ESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPDQSCWP 373
            +C CNKW+++ I CSH +A    + ID  Q V+  Y L  Y +CYA +F PIP +S WP
Sbjct: 653 GTCSCNKWQSFGIPCSHVLAVSAHMRIDSWQLVEKYYRLDAYASCYAPEFNPIPHESYWP 712

Query: 374 DPNFPKVYPNVELMRGKGRPCSSRIRNEMDWKEPMVKTRCGM 415
            P+FP ++P+   MR KGRP SSRIRNEMD KEP V+ RCG+
Sbjct: 713 YPDFPILHPDPTSMRDKGRPRSSRIRNEMDXKEPSVRIRCGL 753

[Close]
BLAST of Spg010427 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 65.1 bits (157), Expect = 1.8e-10
Identity = 26/75 (34.67%), Postives = 46/75 (61.33%), Query Frame = 0 

Query: 308 VRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPD 367
           V+L   +C C K+++Y+  C HA+A  +++ I+ +Q+V + Y +  Y   YA  F+P+PD
Sbjct: 636 VQLNVSTCTCRKFQSYKFPCLHALAVFEKLKINPLQYVDECYTVEQYCKTYAATFSPVPD 695

Query: 368 QSCWP-DPNFPKVYP 382
            + WP D   P ++P
Sbjct: 696 VAAWPEDCRVPTLFP 710

[Close]
BLAST of Spg010427 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase )

HSP 1 Score: 63.5 bits (153), Expect = 5.2e-10
Identity = 28/90 (31.11%), Postives = 50/90 (55.56%), Query Frame = 0 

Query: 308 VRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPD 367
           V+L + +C C +++  +  C HA+A C  + I+ +Q+V D Y +  Y   Y+ +F+P+P+
Sbjct: 652 VQLNDTTCTCGEFQKNKFPCLHALAVCDELKINPLQYVDDCYTVERYHKTYSAKFSPVPE 711

Query: 368 QSCWPD----PNF--PKVYPNVELMRGKGR 392
            S WP+    P    P + P    + GKG+
Sbjct: 712 LSAWPEAYGVPTLIPPVIEPPPPKVSGKGK 741

[Close]
BLAST of Spg010427 vs. TAIR 10
Match: AT1G64255.1 (MuDR family transposase )

HSP 1 Score: 62.8 bits (151), Expect = 8.8e-10
Identity = 27/77 (35.06%), Postives = 45/77 (58.44%), Query Frame = 0 

Query: 308 VRLYEESCVCNKWKTYRISCSHAIAACKRIGIDYIQFVQDPYALPNYLACYALQFTPIPD 367
           V+L + SC C  ++ Y+  C HA+A CK++  + +Q+V D Y L      YA  F+ +P+
Sbjct: 645 VQLSDCSCTCGDFQRYKFPCLHALAVCKKLKFNPLQYVDDCYTLERLKRTYATIFSHVPE 704

Query: 368 QSCWPDPN-FPKVYPNV 384
            S WP+ +  P++ P V
Sbjct: 705 MSAWPEASGVPRLLPPV 721

The following BLAST results are available for this feature:
BLAST of Spg010427 vs. NCBI nr
Match NameE-valueIdentityDescription
RVW52006.11.5e-3252.21hypothetical protein CK203_068088 [Vitis vinifera][more]
RVX19406.11.5e-3252.21hypothetical protein CK203_008540 [Vitis vinifera][more]
RVW92351.12.6e-3251.09hypothetical protein CK203_032440 [Vitis vinifera][more]
CAN83188.12.2e-3135.60hypothetical protein VITISV_040866 [Vitis vinifera][more]
XP_030950142.11.3e-2645.60uncharacterized protein LOC115974062 [Quercus lobata][more]
BLAST of Spg010427 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg010427 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A438KDW57.5e-3352.21SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_008540 P... [more]
A0A438EWG27.5e-3352.21SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_068088 P... [more]
A0A438I6L21.3e-3251.09SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_032440 P... [more]
A5BFC61.1e-3135.60PMD domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_040866 PE=4 S... [more]
A5B5G38.0e-2742.59SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_019818 ... [more]

Pages

BLAST of Spg010427 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G64260.11.8e-1034.67MuDR family transposase [more]
AT1G49920.15.2e-1031.11MuDR family transposase [more]
AT1G64255.18.8e-1035.06MuDR family transposase [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006564Zinc finger, PMZ-typeSMARTSM0057526again6coord: 313..340
e-value: 1.0E-4
score: 31.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..174
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 306..338
score: 8.394566

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg010427.1Spg010427.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding