Spg010044 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg010044
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description50S ribosomal protein L10
Locationscaffold7: 7788984 .. 7789685 (-)
RNA-Seq ExpressionSpg010044
SyntenySpg010044
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCCTCTCTTCTAAGCTCTCCCTCCTTCAAACCCCCTTCTTCTTCTCAAATTCTAACCCTAAATCGACCCACAAACCCATTATCCTTCTCTCCCCTCCGCCATTCCACCAATCAAGCCCGCCATTATCGCGGCCTCAAGGTCGCCGCCGCCATTTCCCGCACAAAGAAAGAAGAAACCGTCGAAACAGTCAAGCAGCAGCTCGAAAACTGTTATCTATTGGCCGGAATCAAGTACAAGGGCTTCACCGTCAAGCAATTTCAAGAACTCCGTCGATCTCTCCCCGAAACCTCGAAACTCATCGTCGCCAAAAACACGCTCGTTCTCAAAGCGATTGAAGGGACCTCTTGGGAAGCCCTAAAACCCTGCATGAAGGGCATGAATGTTTGGCTATTTGTCCACACCGAGGAAATTCCGGCCGCCATTAAGCCCTATAGGGATTTCCAGAAGGAGAAGAAGCTCGAGGATAATGATTTCACCGGAGCGGTTTTCGAGGGGAAATATTACGGGCCGGATGATTTCAAGGCGTTAGAGACAATGCCGTCGAGAGCGGAGGTTTATGCCAAAATGTTGGGTCTGTTGAAGGGTCCGGCGTCGAGCTTGGTTGGAACGATACAGGCTCCGGCGAGGGAATTGCTGATGGTTTTGAAGGCCTATGTGCAGAAATTGGAGGAGCAAGGCGGCGGCGGTGGTCAGTAA

mRNA sequence

ATGGAAGCCTCTCTTCTAAGCTCTCCCTCCTTCAAACCCCCTTCTTCTTCTCAAATTCTAACCCTAAATCGACCCACAAACCCATTATCCTTCTCTCCCCTCCGCCATTCCACCAATCAAGCCCGCCATTATCGCGGCCTCAAGGTCGCCGCCGCCATTTCCCGCACAAAGAAAGAAGAAACCGTCGAAACAGTCAAGCAGCAGCTCGAAAACTGTTATCTATTGGCCGGAATCAAGTACAAGGGCTTCACCGTCAAGCAATTTCAAGAACTCCGTCGATCTCTCCCCGAAACCTCGAAACTCATCGTCGCCAAAAACACGCTCGTTCTCAAAGCGATTGAAGGGACCTCTTGGGAAGCCCTAAAACCCTGCATGAAGGGCATGAATGTTTGGCTATTTGTCCACACCGAGGAAATTCCGGCCGCCATTAAGCCCTATAGGGATTTCCAGAAGGAGAAGAAGCTCGAGGATAATGATTTCACCGGAGCGGTTTTCGAGGGGAAATATTACGGGCCGGATGATTTCAAGGCGTTAGAGACAATGCCGTCGAGAGCGGAGGTTTATGCCAAAATGTTGGGTCTGTTGAAGGGTCCGGCGTCGAGCTTGGTTGGAACGATACAGGCTCCGGCGAGGGAATTGCTGATGGTTTTGAAGGCCTATGTGCAGAAATTGGAGGAGCAAGGCGGCGGCGGTGGTCAGTAA

Coding sequence (CDS)

ATGGAAGCCTCTCTTCTAAGCTCTCCCTCCTTCAAACCCCCTTCTTCTTCTCAAATTCTAACCCTAAATCGACCCACAAACCCATTATCCTTCTCTCCCCTCCGCCATTCCACCAATCAAGCCCGCCATTATCGCGGCCTCAAGGTCGCCGCCGCCATTTCCCGCACAAAGAAAGAAGAAACCGTCGAAACAGTCAAGCAGCAGCTCGAAAACTGTTATCTATTGGCCGGAATCAAGTACAAGGGCTTCACCGTCAAGCAATTTCAAGAACTCCGTCGATCTCTCCCCGAAACCTCGAAACTCATCGTCGCCAAAAACACGCTCGTTCTCAAAGCGATTGAAGGGACCTCTTGGGAAGCCCTAAAACCCTGCATGAAGGGCATGAATGTTTGGCTATTTGTCCACACCGAGGAAATTCCGGCCGCCATTAAGCCCTATAGGGATTTCCAGAAGGAGAAGAAGCTCGAGGATAATGATTTCACCGGAGCGGTTTTCGAGGGGAAATATTACGGGCCGGATGATTTCAAGGCGTTAGAGACAATGCCGTCGAGAGCGGAGGTTTATGCCAAAATGTTGGGTCTGTTGAAGGGTCCGGCGTCGAGCTTGGTTGGAACGATACAGGCTCCGGCGAGGGAATTGCTGATGGTTTTGAAGGCCTATGTGCAGAAATTGGAGGAGCAAGGCGGCGGCGGTGGTCAGTAA

Protein sequence

MEASLLSSPSFKPPSSSQILTLNRPTNPLSFSPLRHSTNQARHYRGLKVAAAISRTKKEETVETVKQQLENCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEALKPCMKGMNVWLFVHTEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLKGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ
Homology
BLAST of Spg010044 vs. NCBI nr
Match: XP_022990377.1 (50S ribosomal protein L10, chloroplastic [Cucurbita maxima])

HSP 1 Score: 439.9 bits (1130), Expect = 1.4e-119
Identity = 222/233 (95.28%), Postives = 228/233 (97.85%), Query Frame = 0

Query: 1   MEASLLSSPSFKPPSSSQILTLNRPTNPLSFSPLRHSTNQARHYRGLKVAAAISRTKKEE 60
           MEASLLS PSFK PSSSQILTLNRPTNPLSFSPLRHSTNQ RHYR LKVAAAISRTKKEE
Sbjct: 1   MEASLLSFPSFKTPSSSQILTLNRPTNPLSFSPLRHSTNQGRHYRCLKVAAAISRTKKEE 60

Query: 61  TVETVKQQLENCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA 120
           TVETVK+QL+ CYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA
Sbjct: 61  TVETVKEQLDKCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA 120

Query: 121 LKPCMKGMNVWLFVHTEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALET 180
           LKPCMKGMNVWLFVH+EEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALET
Sbjct: 121 LKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALET 180

Query: 181 MPSRAEVYAKMLGLLKGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 234
           MPSRAEVYAKMLGLLKGPASSLVGT+QAPAR++LMVLKAYVQKLEEQGGGGGQ
Sbjct: 181 MPSRAEVYAKMLGLLKGPASSLVGTLQAPARDVLMVLKAYVQKLEEQGGGGGQ 233

BLAST of Spg010044 vs. NCBI nr
Match: XP_023523503.1 (50S ribosomal protein L10, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435.6 bits (1119), Expect = 2.6e-118
Identity = 219/233 (93.99%), Postives = 226/233 (97.00%), Query Frame = 0

Query: 1   MEASLLSSPSFKPPSSSQILTLNRPTNPLSFSPLRHSTNQARHYRGLKVAAAISRTKKEE 60
           MEASLLS PSFK PSSSQILTLNRPTNPLSFSPLRHSTNQ RHYR LKV+ AISRTKKEE
Sbjct: 1   MEASLLSFPSFKTPSSSQILTLNRPTNPLSFSPLRHSTNQGRHYRCLKVSGAISRTKKEE 60

Query: 61  TVETVKQQLENCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA 120
           TVETVK+QL+ CYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA
Sbjct: 61  TVETVKEQLDKCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA 120

Query: 121 LKPCMKGMNVWLFVHTEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALET 180
           LKPCMKGMNVWLFVH+EEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFK LET
Sbjct: 121 LKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKTLET 180

Query: 181 MPSRAEVYAKMLGLLKGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 234
           MPSRAEVYAKMLGLLKGPASSLVGT+QAPAR++LMVLKAYVQKLEEQGGGGGQ
Sbjct: 181 MPSRAEVYAKMLGLLKGPASSLVGTLQAPARDVLMVLKAYVQKLEEQGGGGGQ 233

BLAST of Spg010044 vs. NCBI nr
Match: XP_022943219.1 (50S ribosomal protein L10, chloroplastic [Cucurbita moschata] >KAG7030766.1 50S ribosomal protein L10, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 433.7 bits (1114), Expect = 9.9e-118
Identity = 218/232 (93.97%), Postives = 225/232 (96.98%), Query Frame = 0

Query: 1   MEASLLSSPSFKPPSSSQILTLNRPTNPLSFSPLRHSTNQARHYRGLKVAAAISRTKKEE 60
           MEASLLS PSFK PSSSQILTLNRPTNPLSFSPLRHSTNQ RHYR LKVA AISRTKKEE
Sbjct: 1   MEASLLSFPSFKTPSSSQILTLNRPTNPLSFSPLRHSTNQGRHYRCLKVAGAISRTKKEE 60

Query: 61  TVETVKQQLENCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA 120
           TVETVK+QL+ CYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGT+WEA
Sbjct: 61  TVETVKEQLDKCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTTWEA 120

Query: 121 LKPCMKGMNVWLFVHTEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALET 180
           LKPCMKGMNVWLFVH+EEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFK LET
Sbjct: 121 LKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKTLET 180

Query: 181 MPSRAEVYAKMLGLLKGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGG 233
           MPSRAEVYAKMLGLLKGPASSLVGT+QAPAR++LMVLKAYVQKLEEQGGGGG
Sbjct: 181 MPSRAEVYAKMLGLLKGPASSLVGTLQAPARDVLMVLKAYVQKLEEQGGGGG 232

BLAST of Spg010044 vs. NCBI nr
Match: KAG6600094.1 (50S ribosomal protein L10, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 430.3 bits (1105), Expect = 1.1e-116
Identity = 219/233 (93.99%), Postives = 225/233 (96.57%), Query Frame = 0

Query: 1   MEASLLSSPSFK-PPSSSQILTLNRPTNPLSFSPLRHSTNQARHYRGLKVAAAISRTKKE 60
           MEASLLS PSFK P SSSQILTLNRPTNPLSFSPLRHSTNQ RHYR LKVA AISRTKKE
Sbjct: 1   MEASLLSFPSFKTPSSSSQILTLNRPTNPLSFSPLRHSTNQGRHYRCLKVAGAISRTKKE 60

Query: 61  ETVETVKQQLENCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVETVK+QL+ CYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE
Sbjct: 61  ETVETVKEQLDKCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120

Query: 121 ALKPCMKGMNVWLFVHTEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALE 180
           ALKPCMKGMNVWLFVH+EEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFK LE
Sbjct: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKTLE 180

Query: 181 TMPSRAEVYAKMLGLLKGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGG 233
           TMPSRAEVYAKMLGLLKGPASSLVGT+QAPAR++LMVLKAYVQKLEEQGGGGG
Sbjct: 181 TMPSRAEVYAKMLGLLKGPASSLVGTLQAPARDVLMVLKAYVQKLEEQGGGGG 233

BLAST of Spg010044 vs. NCBI nr
Match: XP_008445837.1 (PREDICTED: 50S ribosomal protein L10, chloroplastic [Cucumis melo] >KAA0034043.1 50S ribosomal protein L10 [Cucumis melo var. makuwa])

HSP 1 Score: 429.5 bits (1103), Expect = 1.9e-116
Identity = 218/233 (93.56%), Postives = 225/233 (96.57%), Query Frame = 0

Query: 1   MEASLLSSPSFKPPSSSQILTLNRPTNPLSFSPLRHSTNQARHYRGLKVAAAISRTKKEE 60
           MEASL+S  SF PP SSQILTLNRPTNPLSFS  RHSTNQ RHYRGLKVAAAISRTKKEE
Sbjct: 1   MEASLISFTSFTPPPSSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKEE 60

Query: 61  TVETVKQQLENCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA 120
           TVETVKQQLE+CYLLAGIKYKGFTVK+FQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA
Sbjct: 61  TVETVKQQLEDCYLLAGIKYKGFTVKEFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA 120

Query: 121 LKPCMKGMNVWLFVHTEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALET 180
           LKPCMKGMNVWLFVH+EEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGK+YGPD+FKALET
Sbjct: 121 LKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKFYGPDEFKALET 180

Query: 181 MPSRAEVYAKMLGLLKGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 234
           MPSRAEVYAKMLGLL+ PASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ
Sbjct: 181 MPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 233

BLAST of Spg010044 vs. ExPASy Swiss-Prot
Match: O80362 (50S ribosomal protein L10, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 4.4e-84
Identity = 163/235 (69.36%), Postives = 190/235 (80.85%), Query Frame = 0

Query: 1   MEASLLSSPSFKPPSSSQIL------TLNRPTNPLSFSPLRHSTNQARHYRGLKVAAAIS 60
           MEA+  + PS    S    L      +L  PT+P  F P           + L + +AIS
Sbjct: 1   MEATFFTLPSSTSHSYPFSLKSHFNNSLTLPTHP-HFKP---------KSKNLTIRSAIS 60

Query: 61  RTKKEETVETVKQQLENCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIE 120
           RTKKEETVETVKQQLE+CYLLAGI YKG TVKQFQELR  LP+T+KL+VAKNTLVLKAIE
Sbjct: 61  RTKKEETVETVKQQLEDCYLLAGIGYKGLTVKQFQELRSQLPDTTKLLVAKNTLVLKAIE 120

Query: 121 GTSWEALKPCMKGMNVWLFVHTEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDD 180
           GT WEALKPCMKGMN WLFVH+EEIPAA+KPYR FQKEKKLE+NDFTGAVFEGK+YGP++
Sbjct: 121 GTKWEALKPCMKGMNAWLFVHSEEIPAALKPYRTFQKEKKLEENDFTGAVFEGKFYGPEE 180

Query: 181 FKALETMPSRAEVYAKMLGLLKGPASSLVGTIQAPARELLMVLKAYVQKLEEQGG 230
           FKALET+P+RAE+YA++LG LKGPAS++VGTIQAPAR L+MVLKAYV+KLEE+GG
Sbjct: 181 FKALETLPTRAEIYAQLLGSLKGPASAVVGTIQAPARNLVMVLKAYVKKLEEEGG 225

BLAST of Spg010044 vs. ExPASy Swiss-Prot
Match: Q9FY50 (50S ribosomal protein L10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.4e-76
Identity = 148/228 (64.91%), Postives = 176/228 (77.19%), Query Frame = 0

Query: 1   MEASLLS-SPSFKPPSSSQILTLNRPTNPLSFSPLRHSTNQARHYRGLKVAAAISRTKKE 60
           ME +LLS S S  P    +I TL   T           +N   + R   + +A+SR KKE
Sbjct: 1   MEVALLSFSSSLSPLCHQRISTLTPKT-----------SNSPNYPRLPVIRSAVSRNKKE 60

Query: 61  ETVETVKQQLENCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVE VK  LENC+LLA I YKG TVKQFQ+LRR+LP+T+KLIVAKNTLV KAIEGT WE
Sbjct: 61  ETVEAVKSHLENCHLLAAINYKGLTVKQFQDLRRTLPDTTKLIVAKNTLVFKAIEGTKWE 120

Query: 121 ALKPCMKGMNVWLFVHTEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALE 180
           ALKPCMKGMN WLFV T+EIP+AIKPYR FQKE+KLE+NDF GAVFEGK+Y PD+FK LE
Sbjct: 121 ALKPCMKGMNAWLFVQTDEIPSAIKPYRSFQKERKLENNDFAGAVFEGKFYAPDNFKVLE 180

Query: 181 TMPSRAEVYAKMLGLLKGPASSLVGTIQAPARELLMVLKAYVQKLEEQ 228
           TMP+RAEVYAKMLG L+ PA +LV T+QAPARE++MVL AY++KLE++
Sbjct: 181 TMPTRAEVYAKMLGALQSPAINLVTTLQAPAREVIMVLMAYIKKLEDE 217

BLAST of Spg010044 vs. ExPASy Swiss-Prot
Match: P82139 (50S ribosomal protein L10, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL10 PE=1 SV=2)

HSP 1 Score: 283.1 bits (723), Expect = 2.8e-75
Identity = 135/201 (67.16%), Postives = 164/201 (81.59%), Query Frame = 0

Query: 27  NPLSFSPLRHSTNQARHYRGLKVAAAISRTKKEETVETVKQQLENCYLLAGIKYKGFTVK 86
           NP   + L       +H     + AAISRTKKEETVETV++ LENCYLLA I YKGFTVK
Sbjct: 28  NPFKPNNLTFPRTTHKHPTTTTITAAISRTKKEETVETVQKHLENCYLLAAINYKGFTVK 87

Query: 87  QFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEALKPCMKGMNVWLFVHTEEIPAAIKPY 146
           QFQ+LR++LPE + LIVAKNTLV KA++ T W A+KPCMKGMN WLFVH+EEIP AIKPY
Sbjct: 88  QFQDLRKALPENTTLIVAKNTLVEKAVQDTQWAAIKPCMKGMNAWLFVHSEEIPIAIKPY 147

Query: 147 RDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPSRAEVYAKMLGLLKGPASSLVGTI 206
           R FQKE+KLEDNDFTGA FEGK+YGP + K LETMPS+AE++AK+LG LK P S+LVGT+
Sbjct: 148 RTFQKERKLEDNDFTGACFEGKFYGPGEVKRLETMPSKAEIFAKLLGSLKSPGSALVGTL 207

Query: 207 QAPARELLMVLKAYVQKLEEQ 228
           QAPAR+L+ +LKAY++KLE++
Sbjct: 208 QAPARDLVFLLKAYIKKLEDE 228

BLAST of Spg010044 vs. ExPASy Swiss-Prot
Match: A5IJW5 (50S ribosomal protein L10 OS=Thermotoga petrophila (strain ATCC BAA-488 / DSM 13995 / JCM 10881 / RKU-1) OX=390874 GN=rplJ PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.3e-16
Identity = 53/178 (29.78%), Postives = 91/178 (51.12%), Query Frame = 0

Query: 53  ISRTKKEETVETVKQQLENCYLLAGIKYKGFTVKQFQELRRSLPET----SKLIVAKNTL 112
           ++R +KE  VE + +  +   L+    + GFTV    ELR  L E     ++  V KNTL
Sbjct: 2   LTRQQKELIVEEMSEIFKKTSLILFADFLGFTVADLTELRSKLREKYGDGARFRVVKNTL 61

Query: 113 VLKAIEGTSWEALKPCMKGMNVWLFVHTEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGK 172
           +  A++   +E  +  +KG    L+V   +   A+K   +F K+KK + +   G   EGK
Sbjct: 62  LNLALKNAEYEGYEEFLKGPTAVLYVTEGDPVEAVKIVYNFYKDKKADLSRLKGGFLEGK 121

Query: 173 YYGPDDFKALETMPSRAEVYAKMLGLLKGPASSLVGTIQAPARELLMVLKAYVQKLEE 227
            +  ++ + +  +PS+ E+YA ++G +K P + LV  +    R L+ VL A  +K  E
Sbjct: 122 KFTAEEVENIAKLPSKEELYAMLVGRVKAPITGLVFVLSGILRNLVYVLNAIKEKKSE 179

BLAST of Spg010044 vs. ExPASy Swiss-Prot
Match: B1L937 (50S ribosomal protein L10 OS=Thermotoga sp. (strain RQ2) OX=126740 GN=rplJ PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.3e-16
Identity = 53/178 (29.78%), Postives = 91/178 (51.12%), Query Frame = 0

Query: 53  ISRTKKEETVETVKQQLENCYLLAGIKYKGFTVKQFQELRRSLPET----SKLIVAKNTL 112
           ++R +KE  VE + +  +   L+    + GFTV    ELR  L E     ++  V KNTL
Sbjct: 2   LTRQQKELIVEEMSEIFKKTSLILFADFLGFTVADLTELRSKLREKYGDGARFRVVKNTL 61

Query: 113 VLKAIEGTSWEALKPCMKGMNVWLFVHTEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGK 172
           +  A++   +E  +  +KG    L+V   +   A+K   +F K+KK + +   G   EGK
Sbjct: 62  LNLALKNAEYEGYEEFLKGPTAVLYVTEGDPVEAVKIVYNFYKDKKADLSRLKGGFLEGK 121

Query: 173 YYGPDDFKALETMPSRAEVYAKMLGLLKGPASSLVGTIQAPARELLMVLKAYVQKLEE 227
            +  ++ + +  +PS+ E+YA ++G +K P + LV  +    R L+ VL A  +K  E
Sbjct: 122 KFTAEEVENIAKLPSKEELYAMLVGRVKAPITGLVFVLSGILRNLVYVLNAIKEKKSE 179

BLAST of Spg010044 vs. ExPASy TrEMBL
Match: A0A6J1JII9 (50S ribosomal protein L10, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487249 PE=3 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 6.7e-120
Identity = 222/233 (95.28%), Postives = 228/233 (97.85%), Query Frame = 0

Query: 1   MEASLLSSPSFKPPSSSQILTLNRPTNPLSFSPLRHSTNQARHYRGLKVAAAISRTKKEE 60
           MEASLLS PSFK PSSSQILTLNRPTNPLSFSPLRHSTNQ RHYR LKVAAAISRTKKEE
Sbjct: 1   MEASLLSFPSFKTPSSSQILTLNRPTNPLSFSPLRHSTNQGRHYRCLKVAAAISRTKKEE 60

Query: 61  TVETVKQQLENCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA 120
           TVETVK+QL+ CYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA
Sbjct: 61  TVETVKEQLDKCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA 120

Query: 121 LKPCMKGMNVWLFVHTEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALET 180
           LKPCMKGMNVWLFVH+EEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALET
Sbjct: 121 LKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALET 180

Query: 181 MPSRAEVYAKMLGLLKGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 234
           MPSRAEVYAKMLGLLKGPASSLVGT+QAPAR++LMVLKAYVQKLEEQGGGGGQ
Sbjct: 181 MPSRAEVYAKMLGLLKGPASSLVGTLQAPARDVLMVLKAYVQKLEEQGGGGGQ 233

BLAST of Spg010044 vs. ExPASy TrEMBL
Match: A0A6J1FTN1 (50S ribosomal protein L10, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111448014 PE=3 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 4.8e-118
Identity = 218/232 (93.97%), Postives = 225/232 (96.98%), Query Frame = 0

Query: 1   MEASLLSSPSFKPPSSSQILTLNRPTNPLSFSPLRHSTNQARHYRGLKVAAAISRTKKEE 60
           MEASLLS PSFK PSSSQILTLNRPTNPLSFSPLRHSTNQ RHYR LKVA AISRTKKEE
Sbjct: 1   MEASLLSFPSFKTPSSSQILTLNRPTNPLSFSPLRHSTNQGRHYRCLKVAGAISRTKKEE 60

Query: 61  TVETVKQQLENCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA 120
           TVETVK+QL+ CYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGT+WEA
Sbjct: 61  TVETVKEQLDKCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTTWEA 120

Query: 121 LKPCMKGMNVWLFVHTEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALET 180
           LKPCMKGMNVWLFVH+EEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFK LET
Sbjct: 121 LKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKTLET 180

Query: 181 MPSRAEVYAKMLGLLKGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGG 233
           MPSRAEVYAKMLGLLKGPASSLVGT+QAPAR++LMVLKAYVQKLEEQGGGGG
Sbjct: 181 MPSRAEVYAKMLGLLKGPASSLVGTLQAPARDVLMVLKAYVQKLEEQGGGGG 232

BLAST of Spg010044 vs. ExPASy TrEMBL
Match: A0A5A7SUB8 (50S ribosomal protein L10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00270 PE=3 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 9.0e-117
Identity = 218/233 (93.56%), Postives = 225/233 (96.57%), Query Frame = 0

Query: 1   MEASLLSSPSFKPPSSSQILTLNRPTNPLSFSPLRHSTNQARHYRGLKVAAAISRTKKEE 60
           MEASL+S  SF PP SSQILTLNRPTNPLSFS  RHSTNQ RHYRGLKVAAAISRTKKEE
Sbjct: 1   MEASLISFTSFTPPPSSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKEE 60

Query: 61  TVETVKQQLENCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA 120
           TVETVKQQLE+CYLLAGIKYKGFTVK+FQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA
Sbjct: 61  TVETVKQQLEDCYLLAGIKYKGFTVKEFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA 120

Query: 121 LKPCMKGMNVWLFVHTEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALET 180
           LKPCMKGMNVWLFVH+EEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGK+YGPD+FKALET
Sbjct: 121 LKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKFYGPDEFKALET 180

Query: 181 MPSRAEVYAKMLGLLKGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 234
           MPSRAEVYAKMLGLL+ PASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ
Sbjct: 181 MPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 233

BLAST of Spg010044 vs. ExPASy TrEMBL
Match: A0A1S3BDM0 (50S ribosomal protein L10, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488738 PE=3 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 9.0e-117
Identity = 218/233 (93.56%), Postives = 225/233 (96.57%), Query Frame = 0

Query: 1   MEASLLSSPSFKPPSSSQILTLNRPTNPLSFSPLRHSTNQARHYRGLKVAAAISRTKKEE 60
           MEASL+S  SF PP SSQILTLNRPTNPLSFS  RHSTNQ RHYRGLKVAAAISRTKKEE
Sbjct: 1   MEASLISFTSFTPPPSSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKEE 60

Query: 61  TVETVKQQLENCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA 120
           TVETVKQQLE+CYLLAGIKYKGFTVK+FQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA
Sbjct: 61  TVETVKQQLEDCYLLAGIKYKGFTVKEFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEA 120

Query: 121 LKPCMKGMNVWLFVHTEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALET 180
           LKPCMKGMNVWLFVH+EEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGK+YGPD+FKALET
Sbjct: 121 LKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKFYGPDEFKALET 180

Query: 181 MPSRAEVYAKMLGLLKGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 234
           MPSRAEVYAKMLGLL+ PASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ
Sbjct: 181 MPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 233

BLAST of Spg010044 vs. ExPASy TrEMBL
Match: A0A0A0KLL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G176000 PE=3 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 5.9e-116
Identity = 219/235 (93.19%), Postives = 226/235 (96.17%), Query Frame = 0

Query: 1   MEASLLSSPSFKPPSSS--QILTLNRPTNPLSFSPLRHSTNQARHYRGLKVAAAISRTKK 60
           MEASL++  SF PPSSS  QILTLNRPTNPLSFS  RHSTNQ RHYRGLKV+AAISRTKK
Sbjct: 1   MEASLITFTSFTPPSSSSTQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVSAAISRTKK 60

Query: 61  EETVETVKQQLENCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW 120
           EETVETVKQQLE+CYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW
Sbjct: 61  EETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW 120

Query: 121 EALKPCMKGMNVWLFVHTEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKAL 180
           EALKPCMKGMNVWLFVH+EEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPD+FKAL
Sbjct: 121 EALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKAL 180

Query: 181 ETMPSRAEVYAKMLGLLKGPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 234
           ETMPSRAEVYAKMLGLL+ PASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ
Sbjct: 181 ETMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGGGQ 235

BLAST of Spg010044 vs. TAIR 10
Match: AT5G13510.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 286.2 bits (731), Expect = 2.4e-77
Identity = 148/228 (64.91%), Postives = 176/228 (77.19%), Query Frame = 0

Query: 1   MEASLLS-SPSFKPPSSSQILTLNRPTNPLSFSPLRHSTNQARHYRGLKVAAAISRTKKE 60
           ME +LLS S S  P    +I TL   T           +N   + R   + +A+SR KKE
Sbjct: 1   MEVALLSFSSSLSPLCHQRISTLTPKT-----------SNSPNYPRLPVIRSAVSRNKKE 60

Query: 61  ETVETVKQQLENCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVE VK  LENC+LLA I YKG TVKQFQ+LRR+LP+T+KLIVAKNTLV KAIEGT WE
Sbjct: 61  ETVEAVKSHLENCHLLAAINYKGLTVKQFQDLRRTLPDTTKLIVAKNTLVFKAIEGTKWE 120

Query: 121 ALKPCMKGMNVWLFVHTEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALE 180
           ALKPCMKGMN WLFV T+EIP+AIKPYR FQKE+KLE+NDF GAVFEGK+Y PD+FK LE
Sbjct: 121 ALKPCMKGMNAWLFVQTDEIPSAIKPYRSFQKERKLENNDFAGAVFEGKFYAPDNFKVLE 180

Query: 181 TMPSRAEVYAKMLGLLKGPASSLVGTIQAPARELLMVLKAYVQKLEEQ 228
           TMP+RAEVYAKMLG L+ PA +LV T+QAPARE++MVL AY++KLE++
Sbjct: 181 TMPTRAEVYAKMLGALQSPAINLVTTLQAPAREVIMVLMAYIKKLEDE 217

BLAST of Spg010044 vs. TAIR 10
Match: AT3G12370.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 188.3 bits (477), Expect = 6.8e-48
Identity = 92/146 (63.01%), Postives = 109/146 (74.66%), Query Frame = 0

Query: 66  KQQLENCYLLAGIKYKGFTVKQFQELRRSLPE--TSKLIVAKNTLVLKAIEGTSWEALKP 125
           K  LENC+ + GI Y G +VKQ QELR  L E   +KL+VAKNTLV KA+EGT WE+LKP
Sbjct: 15  KINLENCHFITGINYNGLSVKQLQELRGILRENTNTKLLVAKNTLVYKALEGTKWESLKP 74

Query: 126 CMKGMNVWLFVHTEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALETMPS 185
           CMKGMN WLFV +E+IPAA+K + +FQKEKKL DN+  GAVFE K Y P D+K +ETMPS
Sbjct: 75  CMKGMNAWLFVQSEDIPAALKTFINFQKEKKLYDNNLGGAVFEEKLYAPQDYKVIETMPS 134

Query: 186 RAEVYAKMLGLLKGPASSLVGTIQAP 210
           RA+VY  MLG L  PA  LV  +QAP
Sbjct: 135 RADVYGMMLGSLHWPALDLVNALQAP 160

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022990377.11.4e-11995.2850S ribosomal protein L10, chloroplastic [Cucurbita maxima][more]
XP_023523503.12.6e-11893.9950S ribosomal protein L10, chloroplastic [Cucurbita pepo subsp. pepo][more]
XP_022943219.19.9e-11893.9750S ribosomal protein L10, chloroplastic [Cucurbita moschata] >KAG7030766.1 50S ... [more]
KAG6600094.11.1e-11693.9950S ribosomal protein L10, chloroplastic, partial [Cucurbita argyrosperma subsp.... [more]
XP_008445837.11.9e-11693.56PREDICTED: 50S ribosomal protein L10, chloroplastic [Cucumis melo] >KAA0034043.1... [more]
Match NameE-valueIdentityDescription
O803624.4e-8469.3650S ribosomal protein L10, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL10 P... [more]
Q9FY503.4e-7664.9150S ribosomal protein L10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1... [more]
P821392.8e-7567.1650S ribosomal protein L10, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL10 P... [more]
A5IJW52.3e-1629.7850S ribosomal protein L10 OS=Thermotoga petrophila (strain ATCC BAA-488 / DSM 13... [more]
B1L9372.3e-1629.7850S ribosomal protein L10 OS=Thermotoga sp. (strain RQ2) OX=126740 GN=rplJ PE=3 ... [more]
Match NameE-valueIdentityDescription
A0A6J1JII96.7e-12095.2850S ribosomal protein L10, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11148... [more]
A0A6J1FTN14.8e-11893.9750S ribosomal protein L10, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A5A7SUB89.0e-11793.5650S ribosomal protein L10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo... [more]
A0A1S3BDM09.0e-11793.5650S ribosomal protein L10, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488738... [more]
A0A0A0KLL55.9e-11693.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G176000 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT5G13510.12.4e-7764.91Ribosomal protein L10 family protein [more]
AT3G12370.16.8e-4863.01Ribosomal protein L10 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.250.290coord: 182..225
e-value: 8.0E-12
score: 46.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
IPR043141Ribosomal protein L10-like domain superfamilyGENE3D3.30.70.1730coord: 52..181
e-value: 1.9E-30
score: 107.7
IPR043141Ribosomal protein L10-like domain superfamilySUPERFAMILY160369Ribosomal protein L10-likecoord: 55..223
IPR001790Ribosomal protein L10PPFAMPF00466Ribosomal_L10coord: 55..150
e-value: 7.4E-21
score: 74.2
IPR001790Ribosomal protein L10PPANTHERPTHR1156039S RIBOSOMAL PROTEIN L10, MITOCHONDRIALcoord: 28..229
IPR001790Ribosomal protein L10PCDDcd05797Ribosomal_L10coord: 54..211
e-value: 8.0247E-48
score: 153.044
IPR022973Ribosomal protein L10HAMAPMF_00362Ribosomal_L10coord: 53..213
score: 18.550287

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg010044.1Spg010044.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022626 cytosolic ribosome
cellular_component GO:0015934 large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome