Spg010020 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg010020
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRING-type domain-containing protein
Locationscaffold7: 4886976 .. 4887861 (-)
RNA-Seq ExpressionSpg010020
SyntenySpg010020
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATTTACAGAGGATTCAGATATTTTTTTATTTTGCATCCAAATCTCCATCGGCATCTTCTTCCTCGTTCTCATAGCCCTAGCTTACCACTGCAATCGCCGCATCCACGCCGCCGCCGATCGCGGCGGCGTGGGCGACAGAGGCAGCAATCGGGCCTCCGACGAGATCAGTTCCGGCTGCGTGGATACTACTGTAAGCAAGTTCCCGGAGATGCAGTTCTCGCTAGCGAAGAGCGACGGCGACGGCGGCGGATGTGCGATTTGCTTGACGGATTTCAGAGAGAGAGAGTCGCTCCGGTTGCGGCTACTGCCGCATTGTGGACACGTGTTCCATGTCACGTGCATAGATCAGTGGCTGCGGCGGCAAACCTCGTGCCCGATATGTAGAAATCCGGCTTTGCCGACGCCGAGCCCTTATACGAATCCTTTGGCCGCCATTGCTCTTTCCATTTAGAAGACAGTCGCTTTGATTCAATTATTGGTTTTATTTTATTTAATTTACAGATTCTTCTTCTTCTTTTTGTTTATTTTTTTTTTCTTGAAGAACATTTGGAAGATCATCACAATTTGAGTATATTTGATTTAGGTTTAGTTTGGGGTTACGGTAACTTTTAAAATAATAATTGCTCTAAAAAAAGCAACTACATAGAAACTAAATTAGTGTTTGGTAAATTTCAGATTTAAACATATAAAATCAAATTGTTGCGAAATAAGTATAACGACCAAAATAGACATATTTAAGTATGAGATTGAATTAATATTTACCTTCAAAACTTTCCAAAGATAATTAGACAAATTTATATCATTTATATTATAAATTACATTTTGTTTACTTTAAATAAATTGATAAAAATATCCATAGAAAAAATTGCATCAAACAAAAT

mRNA sequence

ATGGGATTTACAGAGGATTCAGATATTTTTTTATTTTGCATCCAAATCTCCATCGGCATCTTCTTCCTCGTTCTCATAGCCCTAGCTTACCACTGCAATCGCCGCATCCACGCCGCCGCCGATCGCGGCGGCGTGGGCGACAGAGGCAGCAATCGGGCCTCCGACGAGATCAGTTCCGGCTGCGTGGATACTACTGTAAGCAAGTTCCCGGAGATGCAGTTCTCGCTAGCGAAGAGCGACGGCGACGGCGGCGGATGTGCGATTTGCTTGACGGATTTCAGAGAGAGAGAGTCGCTCCGGTTGCGGCTACTGCCGCATTGTGGACACGTGTTCCATGTCACGTGCATAGATCAGTGGCTGCGGCGGCAAACCTCGTGCCCGATATGTAGAAATCCGGCTTTGCCGACGCCGAGCCCTTATACGAATCCTTTGGCCGCCATTGCTCTTTCCATTTAG

Coding sequence (CDS)

ATGGGATTTACAGAGGATTCAGATATTTTTTTATTTTGCATCCAAATCTCCATCGGCATCTTCTTCCTCGTTCTCATAGCCCTAGCTTACCACTGCAATCGCCGCATCCACGCCGCCGCCGATCGCGGCGGCGTGGGCGACAGAGGCAGCAATCGGGCCTCCGACGAGATCAGTTCCGGCTGCGTGGATACTACTGTAAGCAAGTTCCCGGAGATGCAGTTCTCGCTAGCGAAGAGCGACGGCGACGGCGGCGGATGTGCGATTTGCTTGACGGATTTCAGAGAGAGAGAGTCGCTCCGGTTGCGGCTACTGCCGCATTGTGGACACGTGTTCCATGTCACGTGCATAGATCAGTGGCTGCGGCGGCAAACCTCGTGCCCGATATGTAGAAATCCGGCTTTGCCGACGCCGAGCCCTTATACGAATCCTTTGGCCGCCATTGCTCTTTCCATTTAG

Protein sequence

MGFTEDSDIFLFCIQISIGIFFLVLIALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLAKSDGDGGGCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTPSPYTNPLAAIALSI
Homology
BLAST of Spg010020 vs. NCBI nr
Match: XP_030961994.1 (RING-H2 finger protein ATL70-like [Quercus lobata])

HSP 1 Score: 105.5 bits (262), Expect = 4.0e-19
Identity = 59/150 (39.33%), Postives = 87/150 (58.00%), Query Frame = 0

Query: 4   TEDSDIFLFCIQISIGIF--FLVLIALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGC 63
           TE+ D F +    SIGI    +V+ A +Y+C  R+H+A+D        ++  S  I  G 
Sbjct: 7   TENMDGFAYSFGFSIGILAVIVVMTAASYYCT-RLHSASDPTNHNSNTTHEDSVTIDIGL 66

Query: 64  VDTTVSKFPEMQFSLA---KSDGDGGGCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQ 123
            ++T++ +P++ +S A   K D     C+ICLTD++E ++  LRLLP CGHVFH  C+D 
Sbjct: 67  DESTLNSYPKLLYSQAKVHKGDSIASCCSICLTDYKESDT--LRLLPDCGHVFHRKCVDP 126

Query: 124 WLRRQTSCPICRNPALPTPSPYTNPLAAIA 149
           WLR   +CP+CRN    T  P   PLA +A
Sbjct: 127 WLRLHPTCPMCRNSRAST--PLATPLAEVA 151

BLAST of Spg010020 vs. NCBI nr
Match: XP_023875017.1 (RING-H2 finger protein ATL70-like [Quercus suber])

HSP 1 Score: 102.4 bits (254), Expect = 3.4e-18
Identity = 57/150 (38.00%), Postives = 86/150 (57.33%), Query Frame = 0

Query: 4   TEDSDIFLFCIQISIGIF--FLVLIALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGC 63
           T++ D F +    S+GI    +V+ A +Y+C  R+H+A+D        ++  S  I  G 
Sbjct: 7   TQNMDGFAYSFGFSLGILAVIVVMTAASYYCT-RLHSASDPTNHNSNTTHEDSVTIDIGL 66

Query: 64  VDTTVSKFPEMQFSLA---KSDGDGGGCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQ 123
            ++T+  +P++ +S A   K D     C+ICL D++E ++  LRLLP CGHVFH  C+D 
Sbjct: 67  DESTLRSYPKLLYSQAKVHKGDSIASCCSICLADYKESDT--LRLLPDCGHVFHRKCVDP 126

Query: 124 WLRRQTSCPICRNPALPTPSPYTNPLAAIA 149
           WLR   +CPICRN    T  P + PLA +A
Sbjct: 127 WLRLHPTCPICRNSRAST--PLSTPLAEVA 151

BLAST of Spg010020 vs. NCBI nr
Match: XP_015866803.1 (RING-H2 finger protein ATL70-like [Ziziphus jujuba] >XP_015876470.1 RING-H2 finger protein ATL70-like [Ziziphus jujuba])

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-17
Identity = 54/151 (35.76%), Postives = 84/151 (55.63%), Query Frame = 0

Query: 10  FLFCIQISIGIFFLVLI--ALAYHCNRRIHAAADRGGVGDRGSNRAS--------DEISS 69
           + + I +S+GI  ++++   L++ CNRR  A           SN  +        + I++
Sbjct: 13  YSYGIGVSVGIILIIVVITLLSHFCNRRSTAPLPSDNPSSTTSNSLTNVTTQPDDESITT 72

Query: 70  GCVDTTVSKFPEMQFSLAKSDGDGGG----CAICLTDFRERESLRLRLLPHCGHVFHVTC 129
           G  D T+  FP++ ++ AK   D       C++CL D+++++   LRLLP CGH+FH+ C
Sbjct: 73  GLDDATLRSFPKLLYAHAKLHKDKSTASCCCSVCLADYKDKD--MLRLLPDCGHLFHLKC 132

Query: 130 IDQWLRRQTSCPICRNPALPTPSPYTNPLAA 147
           +D WLR   +CPICRN  LPTP     PLAA
Sbjct: 133 VDPWLRLNPTCPICRNSPLPTPLAEVAPLAA 161

BLAST of Spg010020 vs. NCBI nr
Match: KAF3959379.1 (hypothetical protein CMV_015807 [Castanea mollissima])

HSP 1 Score: 98.6 bits (244), Expect = 4.9e-17
Identity = 55/150 (36.67%), Postives = 83/150 (55.33%), Query Frame = 0

Query: 4   TEDSDIFLFCIQISIGIF--FLVLIALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGC 63
           T++ D F +    S+GI    + + A +Y C  R+H+A+D        ++  S  I  G 
Sbjct: 7   TQNMDGFAYSFGFSLGILGVIIAMTAASYFCT-RLHSASDPTNHNSNTTHEDSVTIDIGL 66

Query: 64  VDTTVSKFPEMQFSLA---KSDGDGGGCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQ 123
            ++T+  +P++ +S A   K D     C+ICL D++E ++  LRLLP CGHVFH  C+D 
Sbjct: 67  DESTLRSYPKLLYSQAKVHKGDSIASCCSICLADYKESDT--LRLLPDCGHVFHRKCVDP 126

Query: 124 WLRRQTSCPICRNPALPTPSPYTNPLAAIA 149
           WLR   +CP+CRN    T  P   PLA +A
Sbjct: 127 WLRLHPTCPMCRNSRAST--PLATPLAEVA 151

BLAST of Spg010020 vs. NCBI nr
Match: XP_009389703.1 (PREDICTED: RING-H2 finger protein ATL70-like [Musa acuminata subsp. malaccensis] >CAG1862498.1 unnamed protein product [Musa acuminata subsp. malaccensis])

HSP 1 Score: 98.2 bits (243), Expect = 6.4e-17
Identity = 52/140 (37.14%), Postives = 87/140 (62.14%), Query Frame = 0

Query: 12  FCIQISIGIFFLVL-IALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFP 71
           F + +S+G+  LV+ IALA++   R +A + R     R    A  ++ +G  + T+ ++P
Sbjct: 47  FGVGVSVGVLLLVITIALAFNSCARTNATSSRRPA--RRLAGAMADVETGLDEATLMRYP 106

Query: 72  EMQFSLAKSDGDGGG---CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSCP 131
           ++ F+ AK   +GG    C+ICL+++ + +   LR+LP CGH+FH+ C+D WLR + +CP
Sbjct: 107 KVVFAQAKLVDEGGAASRCSICLSEYEDADV--LRVLPECGHLFHLKCVDPWLRLRPTCP 166

Query: 132 ICRNPALPTPSPYTNPLAAI 148
           +CR   LP+PSP   PLA +
Sbjct: 167 LCRTTPLPSPSP--TPLAEV 180

BLAST of Spg010020 vs. ExPASy Swiss-Prot
Match: O82353 (RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.9e-17
Identity = 55/167 (32.93%), Postives = 85/167 (50.90%), Query Frame = 0

Query: 12  FCIQISIGIFFLVLIAL----AYHCNR-------RIHAAADRGG----------VGDRGS 71
           F   I+I + FLVL++     +Y C R        + +  DRGG            +   
Sbjct: 35  FGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDNE 94

Query: 72  NRASDEISSGCVDTTVSKFPEMQF----SLAKSDGDGGG----CAICLTDFRERESLRLR 131
           +  + ++  G     ++ +P+  F    S A SDG GGG    C+ICL +++E E   LR
Sbjct: 95  DLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAE--MLR 154

Query: 132 LLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTP--SPYTNPLAAI 148
           ++P C H FH+ C+D WL+   SCP+CRN  LPTP  +P + PL+ +
Sbjct: 155 MMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEV 199

BLAST of Spg010020 vs. ExPASy Swiss-Prot
Match: Q8RX29 (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.3e-16
Identity = 49/151 (32.45%), Postives = 78/151 (51.66%), Query Frame = 0

Query: 4   TEDSDIFLFCIQISIGIFFLV--LIALAYHCNRRIHAAADRGGVGD-----RGSNRASDE 63
           T+D   F + I +SIG+  L+  +   +Y+C R   +++      D        +    +
Sbjct: 58  TDDIGGFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSSPSQTNQDSTRIHHHHHHVIID 117

Query: 64  ISSGCVDTTVSKFPEMQFSLAKSDGDGGGCAICLTDFRERESLRLRLLPHCGHVFHVTCI 123
           +  G  + T+  +P++ +S AK       CAICL D++ +    LR LP C H+FH+ CI
Sbjct: 118 VVPGLDEDTIQSYPKILYSEAKGPTTASCCAICLGDYKGKH--LLRQLPDCNHLFHLKCI 177

Query: 124 DQWLRRQTSCPICRNPALPTPSPYTNPLAAI 148
           D WLR   +CP+CR   LPT  P + PLA +
Sbjct: 178 DTWLRLNPTCPVCRTSPLPT--PLSTPLAEV 204

BLAST of Spg010020 vs. ExPASy Swiss-Prot
Match: Q5XF85 (E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana OX=3702 GN=ATL42 PE=1 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 2.4e-14
Identity = 40/99 (40.40%), Postives = 53/99 (53.54%), Query Frame = 0

Query: 33  NRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLAKSDGDGGGCAICLTD 92
           +RR H    R G+    S  +SD   SG   T +   P  +FS  K    G  C++CL+ 
Sbjct: 71  DRRRHDRRLRQGIFFNRSTASSDRF-SGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSK 130

Query: 93  FRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRN 132
           F   E   LRLLP C H FH+ CIDQWL +  +CP+CR+
Sbjct: 131 FESVEI--LRLLPKCRHAFHIGCIDQWLEQHATCPLCRD 166

BLAST of Spg010020 vs. ExPASy Swiss-Prot
Match: Q9M313 (RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.4e-14
Identity = 57/170 (33.53%), Postives = 84/170 (49.41%), Query Frame = 0

Query: 16  ISIGIFFLVLIAL----AYHCNR----RIHAAADRGGVGDRGSNRA-----------SDE 75
           I+I + FLVLI+     +Y C R    R  A+A         S+R             D+
Sbjct: 30  IAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIFVAEDDD 89

Query: 76  ISSGCV------DTTVSKFPEMQF-----SLAKSDG--DGGG----CAICLTDFRERESL 135
           + SG V       + ++ +P+  F     ++   DG  DG G    C+ICL ++ E E  
Sbjct: 90  LESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEE-- 149

Query: 136 RLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTP--SPYTNPLAAI 148
            LR++P C H FHV C+D WL+   SCP+CRN  LPTP  +P + PL+ +
Sbjct: 150 MLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEV 197

BLAST of Spg010020 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 6.9e-14
Identity = 51/146 (34.93%), Postives = 75/146 (51.37%), Query Frame = 0

Query: 20  IFFLVLIALAYHC---------NRRIH---AAADRGGVGDRGSNRASDEISSGCVDTTV- 79
           +F  V++ L +H          NRRI    +A  R     R   ++S  +S   +D TV 
Sbjct: 36  LFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRSLAAARDPTQSSSSLSP--LDPTVL 95

Query: 80  SKFPEMQFSLAKSDGDGGGCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSC 139
            K P   +S+   +     C++CL++F E +    R+LP CGHVFHV CID W R ++SC
Sbjct: 96  EKIPIFVYSVKTHESPLEECSVCLSEFEEDD--EGRVLPKCGHVFHVDCIDTWFRSRSSC 155

Query: 140 PICRNPALPT-PSPYTNPLAAIALSI 152
           P+CR P  P  P     P+AA+  S+
Sbjct: 156 PLCRAPVQPAQPVTEPEPVAAVFPSV 177

BLAST of Spg010020 vs. ExPASy TrEMBL
Match: A0A7N2LGY2 (RING-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 6.2e-18
Identity = 57/146 (39.04%), Postives = 84/146 (57.53%), Query Frame = 0

Query: 8   DIFLFCIQISIGIF--FLVLIALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGCVDTT 67
           D F +    SIGI    +V+ A +Y+C  R+H+A+D        ++  S  I  G  ++T
Sbjct: 2   DGFAYSFGFSIGILAVIVVMTAASYYCT-RLHSASDPTNHNSNTTHEDSVTIDIGLDEST 61

Query: 68  VSKFPEMQFSLA---KSDGDGGGCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRR 127
           ++ +P++ +S A   K D     C+ICLTD++E ++  LRLLP CGHVFH  C+D WLR 
Sbjct: 62  LNSYPKLLYSQAKVHKGDSIASCCSICLTDYKESDT--LRLLPDCGHVFHRKCVDPWLRL 121

Query: 128 QTSCPICRNPALPTPSPYTNPLAAIA 149
             +CP+CRN    T  P   PLA +A
Sbjct: 122 HPTCPMCRNSRAST--PLATPLAEVA 142

BLAST of Spg010020 vs. ExPASy TrEMBL
Match: A0A6P3YT74 (RING-H2 finger protein ATL70-like OS=Ziziphus jujuba OX=326968 GN=LOC107404371 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 8.1e-18
Identity = 54/151 (35.76%), Postives = 84/151 (55.63%), Query Frame = 0

Query: 10  FLFCIQISIGIFFLVLI--ALAYHCNRRIHAAADRGGVGDRGSNRAS--------DEISS 69
           + + I +S+GI  ++++   L++ CNRR  A           SN  +        + I++
Sbjct: 13  YSYGIGVSVGIILIIVVITLLSHFCNRRSTAPLPSDNPSSTTSNSLTNVTTQPDDESITT 72

Query: 70  GCVDTTVSKFPEMQFSLAKSDGDGGG----CAICLTDFRERESLRLRLLPHCGHVFHVTC 129
           G  D T+  FP++ ++ AK   D       C++CL D+++++   LRLLP CGH+FH+ C
Sbjct: 73  GLDDATLRSFPKLLYAHAKLHKDKSTASCCCSVCLADYKDKD--MLRLLPDCGHLFHLKC 132

Query: 130 IDQWLRRQTSCPICRNPALPTPSPYTNPLAA 147
           +D WLR   +CPICRN  LPTP     PLAA
Sbjct: 133 VDPWLRLNPTCPICRNSPLPTPLAEVAPLAA 161

BLAST of Spg010020 vs. ExPASy TrEMBL
Match: M0S8T0 (RING-type domain-containing protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103976216 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 3.1e-17
Identity = 52/140 (37.14%), Postives = 87/140 (62.14%), Query Frame = 0

Query: 12  FCIQISIGIFFLVL-IALAYHCNRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFP 71
           F + +S+G+  LV+ IALA++   R +A + R     R    A  ++ +G  + T+ ++P
Sbjct: 47  FGVGVSVGVLLLVITIALAFNSCARTNATSSRRPA--RRLAGAMADVETGLDEATLMRYP 106

Query: 72  EMQFSLAKSDGDGGG---CAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSCP 131
           ++ F+ AK   +GG    C+ICL+++ + +   LR+LP CGH+FH+ C+D WLR + +CP
Sbjct: 107 KVVFAQAKLVDEGGAASRCSICLSEYEDADV--LRVLPECGHLFHLKCVDPWLRLRPTCP 166

Query: 132 ICRNPALPTPSPYTNPLAAI 148
           +CR   LP+PSP   PLA +
Sbjct: 167 LCRTTPLPSPSP--TPLAEV 180

BLAST of Spg010020 vs. ExPASy TrEMBL
Match: A0A2P5DAD8 (43kDa postsynaptic protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_081710 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 4.0e-17
Identity = 66/175 (37.71%), Postives = 87/175 (49.71%), Query Frame = 0

Query: 11  LFCIQISI-GIFFLVLIALAYHCNRRIHAAA---------DRGGVG-----DRGSNRASD 70
           L  I+IS+ G+  L+ +A+ Y+ N R    A           GGVG     D+ S  ++ 
Sbjct: 17  LKAIEISLGGLIILIALAIVYYFNSRFRTRAFLLNRENQPRTGGVGSSTTADQESASSAT 76

Query: 71  EISSGCVDTTVSKFPEMQFSLAK----------SDGDGGG-------CAICLTDFRERES 130
            I  G  + T+  FP+  F+ AK            GDG G       C+ICL DF E + 
Sbjct: 77  AIEFGLNEATLQSFPKFVFAGAKLLDDNGVAIVVSGDGSGEDDSAACCSICLVDFAESDV 136

Query: 131 LRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPT------PSPYTNPLAAI 148
             LRLLP CGHVFHV C+D WLR + +CP CR   LPT      P+P T PLA +
Sbjct: 137 --LRLLPDCGHVFHVKCVDPWLRLRPTCPNCRTSPLPTPTTTPVPTPITTPLAEV 189

BLAST of Spg010020 vs. ExPASy TrEMBL
Match: A0A2P5DAE1 (43kDa postsynaptic protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_081700 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 5.3e-17
Identity = 55/150 (36.67%), Postives = 81/150 (54.00%), Query Frame = 0

Query: 10  FLFCIQISIGIFFLVLIALAYHC----NRRIHAAADRGGVGDRGSNRASDEISSGCVDTT 69
           F + I +S+G+  L++    + C      R+    +R       +  +  +   G  D  
Sbjct: 19  FRYGIGVSVGVLILIIFITLFSCICTLRTRLSNHPNRPAALVVVTTSSELQAEQGLDDAV 78

Query: 70  VSKFPEMQFSLAK------SDG-DGGGCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQ 129
           +  FP++ +  AK      SDG D   C+ICL D+ + +   LRLLP CGHVFH+TC+D 
Sbjct: 79  LGTFPKISYGQAKLHMNKGSDGHDRSTCSICLADYNDSD--MLRLLPDCGHVFHLTCVDP 138

Query: 130 WLRRQTSCPICRNPALPTPSPYTNPLAAIA 149
           WLR+  +CPICRN  +PTPS  T PLA +A
Sbjct: 139 WLRQHPTCPICRNSPIPTPS--TTPLAEVA 164

BLAST of Spg010020 vs. TAIR 10
Match: AT2G46160.1 (RING/U-box superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 2.8e-18
Identity = 55/167 (32.93%), Postives = 85/167 (50.90%), Query Frame = 0

Query: 12  FCIQISIGIFFLVLIAL----AYHCNR-------RIHAAADRGG----------VGDRGS 71
           F   I+I + FLVL++     +Y C R        + +  DRGG            +   
Sbjct: 35  FGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDNE 94

Query: 72  NRASDEISSGCVDTTVSKFPEMQF----SLAKSDGDGGG----CAICLTDFRERESLRLR 131
           +  + ++  G     ++ +P+  F    S A SDG GGG    C+ICL +++E E   LR
Sbjct: 95  DLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAE--MLR 154

Query: 132 LLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTP--SPYTNPLAAI 148
           ++P C H FH+ C+D WL+   SCP+CRN  LPTP  +P + PL+ +
Sbjct: 155 MMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEV 199

BLAST of Spg010020 vs. TAIR 10
Match: AT2G35910.1 (RING/U-box superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 3.1e-17
Identity = 49/151 (32.45%), Postives = 78/151 (51.66%), Query Frame = 0

Query: 4   TEDSDIFLFCIQISIGIFFLV--LIALAYHCNRRIHAAADRGGVGD-----RGSNRASDE 63
           T+D   F + I +SIG+  L+  +   +Y+C R   +++      D        +    +
Sbjct: 58  TDDIGGFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSSPSQTNQDSTRIHHHHHHVIID 117

Query: 64  ISSGCVDTTVSKFPEMQFSLAKSDGDGGGCAICLTDFRERESLRLRLLPHCGHVFHVTCI 123
           +  G  + T+  +P++ +S AK       CAICL D++ +    LR LP C H+FH+ CI
Sbjct: 118 VVPGLDEDTIQSYPKILYSEAKGPTTASCCAICLGDYKGKH--LLRQLPDCNHLFHLKCI 177

Query: 124 DQWLRRQTSCPICRNPALPTPSPYTNPLAAI 148
           D WLR   +CP+CR   LPT  P + PLA +
Sbjct: 178 DTWLRLNPTCPVCRTSPLPT--PLSTPLAEV 204

BLAST of Spg010020 vs. TAIR 10
Match: AT3G61550.1 (RING/U-box superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.7e-15
Identity = 57/170 (33.53%), Postives = 84/170 (49.41%), Query Frame = 0

Query: 16  ISIGIFFLVLIAL----AYHCNR----RIHAAADRGGVGDRGSNRA-----------SDE 75
           I+I + FLVLI+     +Y C R    R  A+A         S+R             D+
Sbjct: 30  IAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIFVAEDDD 89

Query: 76  ISSGCV------DTTVSKFPEMQF-----SLAKSDG--DGGG----CAICLTDFRERESL 135
           + SG V       + ++ +P+  F     ++   DG  DG G    C+ICL ++ E E  
Sbjct: 90  LESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEE-- 149

Query: 136 RLRLLPHCGHVFHVTCIDQWLRRQTSCPICRNPALPTP--SPYTNPLAAI 148
            LR++P C H FHV C+D WL+   SCP+CRN  LPTP  +P + PL+ +
Sbjct: 150 MLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEV 197

BLAST of Spg010020 vs. TAIR 10
Match: AT4G28890.1 (RING/U-box superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.7e-15
Identity = 40/99 (40.40%), Postives = 53/99 (53.54%), Query Frame = 0

Query: 33  NRRIHAAADRGGVGDRGSNRASDEISSGCVDTTVSKFPEMQFSLAKSDGDGGGCAICLTD 92
           +RR H    R G+    S  +SD   SG   T +   P  +FS  K    G  C++CL+ 
Sbjct: 71  DRRRHDRRLRQGIFFNRSTASSDRF-SGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSK 130

Query: 93  FRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSCPICRN 132
           F   E   LRLLP C H FH+ CIDQWL +  +CP+CR+
Sbjct: 131 FESVEI--LRLLPKCRHAFHIGCIDQWLEQHATCPLCRD 166

BLAST of Spg010020 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 78.6 bits (192), Expect = 4.9e-15
Identity = 51/146 (34.93%), Postives = 75/146 (51.37%), Query Frame = 0

Query: 20  IFFLVLIALAYHC---------NRRIH---AAADRGGVGDRGSNRASDEISSGCVDTTV- 79
           +F  V++ L +H          NRRI    +A  R     R   ++S  +S   +D TV 
Sbjct: 36  LFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRSLAAARDPTQSSSSLSP--LDPTVL 95

Query: 80  SKFPEMQFSLAKSDGDGGGCAICLTDFRERESLRLRLLPHCGHVFHVTCIDQWLRRQTSC 139
            K P   +S+   +     C++CL++F E +    R+LP CGHVFHV CID W R ++SC
Sbjct: 96  EKIPIFVYSVKTHESPLEECSVCLSEFEEDD--EGRVLPKCGHVFHVDCIDTWFRSRSSC 155

Query: 140 PICRNPALPT-PSPYTNPLAAIALSI 152
           P+CR P  P  P     P+AA+  S+
Sbjct: 156 PLCRAPVQPAQPVTEPEPVAAVFPSV 177

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_030961994.14.0e-1939.33RING-H2 finger protein ATL70-like [Quercus lobata][more]
XP_023875017.13.4e-1838.00RING-H2 finger protein ATL70-like [Quercus suber][more]
XP_015866803.11.7e-1735.76RING-H2 finger protein ATL70-like [Ziziphus jujuba] >XP_015876470.1 RING-H2 fing... [more]
KAF3959379.14.9e-1736.67hypothetical protein CMV_015807 [Castanea mollissima][more]
XP_009389703.16.4e-1737.14PREDICTED: RING-H2 finger protein ATL70-like [Musa acuminata subsp. malaccensis]... [more]
Match NameE-valueIdentityDescription
O823533.9e-1732.93RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1[more]
Q8RX294.3e-1632.45RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1[more]
Q5XF852.4e-1440.40E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana OX=3702 GN=ATL42 PE=1 ... [more]
Q9M3132.4e-1433.53RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1[more]
Q9LZJ66.9e-1434.93RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A7N2LGY26.2e-1839.04RING-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A6P3YT748.1e-1835.76RING-H2 finger protein ATL70-like OS=Ziziphus jujuba OX=326968 GN=LOC107404371 P... [more]
M0S8T03.1e-1737.14RING-type domain-containing protein OS=Musa acuminata subsp. malaccensis OX=2146... [more]
A0A2P5DAD84.0e-1737.7143kDa postsynaptic protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_081710... [more]
A0A2P5DAE15.3e-1736.6743kDa postsynaptic protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_081700... [more]
Match NameE-valueIdentityDescription
AT2G46160.12.8e-1832.93RING/U-box superfamily protein [more]
AT2G35910.13.1e-1732.45RING/U-box superfamily protein [more]
AT3G61550.11.7e-1533.53RING/U-box superfamily protein [more]
AT4G28890.11.7e-1540.40RING/U-box superfamily protein [more]
AT3G62690.14.9e-1534.93AtL5 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 86..129
e-value: 1.4E-8
score: 44.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 86..130
e-value: 3.3E-14
score: 52.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 86..130
score: 13.167916
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 61..134
e-value: 6.7E-22
score: 78.5
NoneNo IPR availablePANTHERPTHR46539E3 UBIQUITIN-PROTEIN LIGASE ATL42coord: 12..132
NoneNo IPR availableCDDcd16461RING-H2_EL5_likecoord: 86..130
e-value: 3.60507E-15
score: 63.4831
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 82..137

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg010020.1Spg010020.1mRNA