Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAGACCCATCATTCCAAGGCTCCTTTTCCTCAAGAAATCGTCCAGGACCAAGAATTTTGAGCTCCTCCAGCACTATGATTATGGGTTTGTTCGTGAGTTCCAATTCTCGCCCTCCACCACTCCTCTGTTTCGTTTTTACAGAGGCCGTCGCCGCCTCCGCCGCCGCGATGTCTATTCGCTGCTGTTTCCCTGCAGATGCCTCGGCGGTTTTGGAGCTGGAGAAGGAGATGGAGACTGCAGAGTGGAGGAGGCTTTTCCCGCCATTGAAGGGCGGTTCTCGGAGGCGTTGGATTGGAGCGATGAAGATGAAGATGATTCGATTGATCGGAGGGCGGAATTGTTCATTGAGAAGTTTTATGCGGATATGAAAATGGAGCGGCTGGCATCGATTTGA
mRNA sequence
ATGAGAAGACCCATCATTCCAAGGCTCCTTTTCCTCAAGAAATCGTCCAGGACCAAGAATTTTGAGCTCCTCCAGCACTATGATTATGGGTTTGTTCGTGAGTTCCAATTCTCGCCCTCCACCACTCCTCTGTTTCGTTTTTACAGAGGCCGTCGCCGCCTCCGCCGCCGCGATGTCTATTCGCTGCTGTTTCCCTGCAGATGCCTCGGCGGTTTTGGAGCTGGAGAAGGAGATGGAGACTGCAGAGTGGAGGAGGCTTTTCCCGCCATTGAAGGGCGGTTCTCGGAGGCGTTGGATTGGAGCGATGAAGATGAAGATGATTCGATTGATCGGAGGGCGGAATTGTTCATTGAGAAGTTTTATGCGGATATGAAAATGGAGCGGCTGGCATCGATTTGA
Coding sequence (CDS)
ATGAGAAGACCCATCATTCCAAGGCTCCTTTTCCTCAAGAAATCGTCCAGGACCAAGAATTTTGAGCTCCTCCAGCACTATGATTATGGGTTTGTTCGTGAGTTCCAATTCTCGCCCTCCACCACTCCTCTGTTTCGTTTTTACAGAGGCCGTCGCCGCCTCCGCCGCCGCGATGTCTATTCGCTGCTGTTTCCCTGCAGATGCCTCGGCGGTTTTGGAGCTGGAGAAGGAGATGGAGACTGCAGAGTGGAGGAGGCTTTTCCCGCCATTGAAGGGCGGTTCTCGGAGGCGTTGGATTGGAGCGATGAAGATGAAGATGATTCGATTGATCGGAGGGCGGAATTGTTCATTGAGAAGTTTTATGCGGATATGAAAATGGAGCGGCTGGCATCGATTTGA
Protein sequence
MRRPIIPRLLFLKKSSRTKNFELLQHYDYGFVREFQFSPSTTPLFRFYRGRRRLRRRDVYSLLFPCRCLGGFGAGEGDGDCRVEEAFPAIEGRFSEALDWSDEDEDDSIDRRAELFIEKFYADMKMERLASI
Homology
BLAST of Spg009976 vs. NCBI nr
Match:
XP_038893176.1 (uncharacterized protein LOC120082033 [Benincasa hispida])
HSP 1 Score: 182.2 bits (461), Expect = 2.9e-42
Identity = 95/132 (71.97%), Postives = 106/132 (80.30%), Query Frame = 0
Query: 1 MRRPIIPRLLFLKKSSRTKNFELLQHYDYGFVREFQFSPSTTPLFRFYRGRRRLRRRDVY 60
M+RPIIP+LLFLKKSSR +FEL HY+YGFVR+FQFSPSTTPLFRFYRGRR L RRDVY
Sbjct: 25 MKRPIIPKLLFLKKSSRRNSFELHHHYNYGFVRDFQFSPSTTPLFRFYRGRRGLCRRDVY 84
Query: 61 SLLFPCRCLGGFGAG--EGDGDCRVEEAFPAIEGRFSEALDWSDEDEDDSIDRRAELFIE 120
S+LFPCRC+G E DGD VEEA P E+LDWS D+DDSIDRRAE+FI+
Sbjct: 85 SVLFPCRCIGSSSGAEKEEDGDYSVEEALP-------ESLDWS--DDDDSIDRRAEIFIQ 144
Query: 121 KFYADMKMERLA 131
KFYADMKMERLA
Sbjct: 145 KFYADMKMERLA 147
BLAST of Spg009976 vs. NCBI nr
Match:
XP_004135396.1 (uncharacterized protein LOC101211232 [Cucumis sativus])
HSP 1 Score: 177.2 bits (448), Expect = 9.5e-41
Identity = 96/137 (70.07%), Postives = 108/137 (78.83%), Query Frame = 0
Query: 1 MRRPIIPRLLFLKKSSRTKNFELLQHYDYGFVREFQFSPSTTPLFRFYR--GRRRLRRRD 60
M+RPIIP+LLFLKKSSR K+FELL HY+YGFVR+F+FSPSTTPLFRF GRR LRR D
Sbjct: 25 MKRPIIPKLLFLKKSSRMKSFELLHHYNYGFVRDFEFSPSTTPLFRFNNRGGRRGLRRYD 84
Query: 61 VYSLLFPCRCLGGFGAG---EGDGDCRVEEAFPAIEGRFSEALDWSDEDEDDSIDRRAEL 120
V S+LFPCRC+ G G EGDGD VEEAFP E+LDWS D+DDSIDRRAE+
Sbjct: 85 VCSVLFPCRCIVGGSGGEKKEGDGDYGVEEAFP-------ESLDWS--DDDDSIDRRAEI 144
Query: 121 FIEKFYADMKMERLASI 133
FI+KFY DMKMERL SI
Sbjct: 145 FIQKFYEDMKMERLTSI 152
BLAST of Spg009976 vs. NCBI nr
Match:
KAE8648793.1 (hypothetical protein Csa_009258 [Cucumis sativus])
HSP 1 Score: 177.2 bits (448), Expect = 9.5e-41
Identity = 96/137 (70.07%), Postives = 108/137 (78.83%), Query Frame = 0
Query: 1 MRRPIIPRLLFLKKSSRTKNFELLQHYDYGFVREFQFSPSTTPLFRFYR--GRRRLRRRD 60
M+RPIIP+LLFLKKSSR K+FELL HY+YGFVR+F+FSPSTTPLFRF GRR LRR D
Sbjct: 23 MKRPIIPKLLFLKKSSRMKSFELLHHYNYGFVRDFEFSPSTTPLFRFNNRGGRRGLRRYD 82
Query: 61 VYSLLFPCRCLGGFGAG---EGDGDCRVEEAFPAIEGRFSEALDWSDEDEDDSIDRRAEL 120
V S+LFPCRC+ G G EGDGD VEEAFP E+LDWS D+DDSIDRRAE+
Sbjct: 83 VCSVLFPCRCIVGGSGGEKKEGDGDYGVEEAFP-------ESLDWS--DDDDSIDRRAEI 142
Query: 121 FIEKFYADMKMERLASI 133
FI+KFY DMKMERL SI
Sbjct: 143 FIQKFYEDMKMERLTSI 150
BLAST of Spg009976 vs. NCBI nr
Match:
KAA0034569.1 (uncharacterized protein E6C27_scaffold65G005850 [Cucumis melo var. makuwa] >TYK09121.1 uncharacterized protein E5676_scaffold475G001120 [Cucumis melo var. makuwa])
HSP 1 Score: 176.4 bits (446), Expect = 1.6e-40
Identity = 101/138 (73.19%), Postives = 111/138 (80.43%), Query Frame = 0
Query: 1 MRRPIIPRLLFLKKSSRTKNFELLQHYDYG-FVREFQFSPSTTPLFRF-YRGRRR-LRRR 60
M+RP+IP+LLFLKKSS TKNFELLQHY+YG FVR+FQFSPSTTPLFRF RG RR LRR
Sbjct: 25 MKRPLIPKLLFLKKSSGTKNFELLQHYNYGSFVRDFQFSPSTTPLFRFNNRGSRRGLRRY 84
Query: 61 DVYSLLFPCRCLGGFGAG---EGDGDCRVEEAFPAIEGRFSEALDWSDEDEDDSIDRRAE 120
DV S+LFPCRC+ G G E DGD VEEAFP E+LDWSD D DDSIDRRAE
Sbjct: 85 DVCSVLFPCRCIIGASGGEKKEKDGDYDVEEAFP-------ESLDWSDND-DDSIDRRAE 144
Query: 121 LFIEKFYADMKMERLASI 133
+FI+KFYADMKMERLASI
Sbjct: 145 IFIQKFYADMKMERLASI 154
BLAST of Spg009976 vs. NCBI nr
Match:
XP_022968138.1 (uncharacterized protein LOC111467464 [Cucurbita maxima])
HSP 1 Score: 165.6 bits (418), Expect = 2.9e-37
Identity = 93/134 (69.40%), Postives = 103/134 (76.87%), Query Frame = 0
Query: 1 MRRPIIPRLLFLKKSSRTKNFELLQHYDYGFVREFQFSPSTTPLFRFYRG-RRRLRRRDV 60
M++PI P+LLFLKKSS K FELLQ FQFSPSTTPLFR YRG RRRLRR V
Sbjct: 25 MKKPIFPKLLFLKKSSPAKKFELLQ---------FQFSPSTTPLFRCYRGRRRRLRRGGV 84
Query: 61 YSLLFPCRCLGGFGAGEGDGDCRVEEAFPAIEGRFSEALDWSD-EDEDDSIDRRAELFIE 120
YS+LFPCRC+G FG G+ EE FPAIEGR SEALD S+ DE+DSIDRRAELFIE
Sbjct: 85 YSVLFPCRCIGNFG-----GEIEGEEGFPAIEGRVSEALDCSELSDEEDSIDRRAELFIE 144
Query: 121 KFYADMKMERLASI 133
KFYADM+MERLA+I
Sbjct: 145 KFYADMEMERLAAI 144
BLAST of Spg009976 vs. ExPASy TrEMBL
Match:
A0A5A7SZQ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001120 PE=4 SV=1)
HSP 1 Score: 176.4 bits (446), Expect = 7.8e-41
Identity = 101/138 (73.19%), Postives = 111/138 (80.43%), Query Frame = 0
Query: 1 MRRPIIPRLLFLKKSSRTKNFELLQHYDYG-FVREFQFSPSTTPLFRF-YRGRRR-LRRR 60
M+RP+IP+LLFLKKSS TKNFELLQHY+YG FVR+FQFSPSTTPLFRF RG RR LRR
Sbjct: 25 MKRPLIPKLLFLKKSSGTKNFELLQHYNYGSFVRDFQFSPSTTPLFRFNNRGSRRGLRRY 84
Query: 61 DVYSLLFPCRCLGGFGAG---EGDGDCRVEEAFPAIEGRFSEALDWSDEDEDDSIDRRAE 120
DV S+LFPCRC+ G G E DGD VEEAFP E+LDWSD D DDSIDRRAE
Sbjct: 85 DVCSVLFPCRCIIGASGGEKKEKDGDYDVEEAFP-------ESLDWSDND-DDSIDRRAE 144
Query: 121 LFIEKFYADMKMERLASI 133
+FI+KFYADMKMERLASI
Sbjct: 145 IFIQKFYADMKMERLASI 154
BLAST of Spg009976 vs. ExPASy TrEMBL
Match:
A0A6J1HX57 (uncharacterized protein LOC111467464 OS=Cucurbita maxima OX=3661 GN=LOC111467464 PE=4 SV=1)
HSP 1 Score: 165.6 bits (418), Expect = 1.4e-37
Identity = 93/134 (69.40%), Postives = 103/134 (76.87%), Query Frame = 0
Query: 1 MRRPIIPRLLFLKKSSRTKNFELLQHYDYGFVREFQFSPSTTPLFRFYRG-RRRLRRRDV 60
M++PI P+LLFLKKSS K FELLQ FQFSPSTTPLFR YRG RRRLRR V
Sbjct: 25 MKKPIFPKLLFLKKSSPAKKFELLQ---------FQFSPSTTPLFRCYRGRRRRLRRGGV 84
Query: 61 YSLLFPCRCLGGFGAGEGDGDCRVEEAFPAIEGRFSEALDWSD-EDEDDSIDRRAELFIE 120
YS+LFPCRC+G FG G+ EE FPAIEGR SEALD S+ DE+DSIDRRAELFIE
Sbjct: 85 YSVLFPCRCIGNFG-----GEIEGEEGFPAIEGRVSEALDCSELSDEEDSIDRRAELFIE 144
Query: 121 KFYADMKMERLASI 133
KFYADM+MERLA+I
Sbjct: 145 KFYADMEMERLAAI 144
BLAST of Spg009976 vs. ExPASy TrEMBL
Match:
A0A6J1G0E9 (uncharacterized protein LOC111449533 OS=Cucurbita moschata OX=3662 GN=LOC111449533 PE=4 SV=1)
HSP 1 Score: 156.4 bits (394), Expect = 8.4e-35
Identity = 92/134 (68.66%), Postives = 103/134 (76.87%), Query Frame = 0
Query: 1 MRRPIIPRLLFLKKSSRTKNFELLQHYDYGFVREFQFSPSTTPLFRFYRG-RRRLRRRDV 60
M++PI P+LLFLKKSS + FELLQ FQFSPSTTPLFR YRG RRRLRR V
Sbjct: 25 MKKPIFPKLLFLKKSSPAEKFELLQ---------FQFSPSTTPLFRCYRGRRRRLRRGGV 84
Query: 61 YSLLFPCRCLGGFGAGEGDGDCRVEEAFPAIEGRFSEALDWSD-EDEDDSIDRRAELFIE 120
YS+LFP RC+G FG GE DG E FPAIEGR SEA DWS+ DE+DSIDRRAELFI+
Sbjct: 85 YSVLFP-RCIGSFG-GENDG----EVGFPAIEGRGSEAWDWSELSDEEDSIDRRAELFIQ 143
Query: 121 KFYADMKMERLASI 133
KFYADM+MERLA+I
Sbjct: 145 KFYADMEMERLAAI 143
BLAST of Spg009976 vs. ExPASy TrEMBL
Match:
A0A2N9FQH2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16876 PE=4 SV=1)
HSP 1 Score: 139.0 bits (349), Expect = 1.4e-29
Identity = 74/139 (53.24%), Postives = 100/139 (71.94%), Query Frame = 0
Query: 1 MRRPIIPRLLFLKKSSRTKNFELLQHYDYGFVREFQFSPSTTPLFRFYRGRRRLRR-RDV 60
MR+PIIP+L+ LKK+ R K F+LL+HY+YG ++++QFSPS+TPL ++R + RR RD+
Sbjct: 1 MRKPIIPKLISLKKARRVKRFKLLKHYNYGVLQDYQFSPSSTPLIHYHRKHFKNRRLRDI 60
Query: 61 YSLLFPCRCLGGFGAGEGDGDCRVE--EAFPAIE----GRFSEALDWSDEDEDDSIDRRA 120
YS+LF CRCLG A GD DC VE A PA E G+F E LD DE+DS+D+RA
Sbjct: 61 YSMLFLCRCLGSLSAEGGDADCIVEALPALPAFENTIAGQFLEPLD--PGDEEDSVDQRA 120
Query: 121 ELFIEKFYADMKMERLASI 133
E FI++FY +M+M+R SI
Sbjct: 121 ERFIQRFYEEMRMQRQESI 137
BLAST of Spg009976 vs. ExPASy TrEMBL
Match:
A0A5N6RE49 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_015866 PE=4 SV=1)
HSP 1 Score: 138.7 bits (348), Expect = 1.8e-29
Identity = 69/135 (51.11%), Postives = 97/135 (71.85%), Query Frame = 0
Query: 1 MRRPIIPRLLFLKKSSRTKNFELLQHYDYGFVREFQFSPSTTPLFRFYRGRRRLRR-RDV 60
MR+P+IP+L+FLKK+ R K F+LL+HY+YGF+ E+QFS S+TPL +++ + RR RD+
Sbjct: 25 MRKPVIPKLIFLKKARRLKKFKLLKHYNYGFLEEYQFSASSTPLIHYHKNHFKSRRLRDI 84
Query: 61 YSLLFPCRCLGGFGAGEGDGDCRVEE--AFPAIEGRFSEALDWSDEDEDDSIDRRAELFI 120
YS+ F C CLG A +GD D R+E A PAI G+F E D DE+DS+D+RAE FI
Sbjct: 85 YSMFFLCACLGSLRAEKGDADYRLESLPALPAIAGQFLEPFD--SGDEEDSVDQRAERFI 144
Query: 121 EKFYADMKMERLASI 133
+FY +M+M+R S+
Sbjct: 145 RRFYEEMRMQRQESL 157
BLAST of Spg009976 vs. TAIR 10
Match:
AT1G68350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 78.2 bits (191), Expect = 5.6e-15
Identity = 52/141 (36.88%), Postives = 82/141 (58.16%), Query Frame = 0
Query: 1 MRRPIIPRLLFLK-KSSRTKNFELLQHYDYGFVREFQFSPSTTPLFRFYRGRRRLRR--- 60
+RRPIIPRL + K R+K +LLQ ++Y F++E+QFSPS+T + Y ++ R
Sbjct: 21 LRRPIIPRLKLIPIKQRRSKRVKLLQQHNYKFLQEYQFSPSSTSFIKCYGKSIQISRSGL 80
Query: 61 RDVYSLLFPCRCLGGFGAGEGDGDCRVEEAFPAIE------GRFSEALD----WSDEDED 120
+ +Y LLF +C+G + + D + +++ +E G S A + + ED
Sbjct: 81 KRIYGLLFLSQCIGRY----NENDDTITQSWMEMEPFHYALGVASPAREHLQPFDYFSED 140
Query: 121 DSIDRRAELFIEKFYADMKME 128
DSID +AE FIEKFY +M+M+
Sbjct: 141 DSIDLKAERFIEKFYDEMRMQ 157
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038893176.1 | 2.9e-42 | 71.97 | uncharacterized protein LOC120082033 [Benincasa hispida] | [more] |
XP_004135396.1 | 9.5e-41 | 70.07 | uncharacterized protein LOC101211232 [Cucumis sativus] | [more] |
KAE8648793.1 | 9.5e-41 | 70.07 | hypothetical protein Csa_009258 [Cucumis sativus] | [more] |
KAA0034569.1 | 1.6e-40 | 73.19 | uncharacterized protein E6C27_scaffold65G005850 [Cucumis melo var. makuwa] >TYK0... | [more] |
XP_022968138.1 | 2.9e-37 | 69.40 | uncharacterized protein LOC111467464 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SZQ9 | 7.8e-41 | 73.19 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1HX57 | 1.4e-37 | 69.40 | uncharacterized protein LOC111467464 OS=Cucurbita maxima OX=3661 GN=LOC111467464... | [more] |
A0A6J1G0E9 | 8.4e-35 | 68.66 | uncharacterized protein LOC111449533 OS=Cucurbita moschata OX=3662 GN=LOC1114495... | [more] |
A0A2N9FQH2 | 1.4e-29 | 53.24 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16876 PE=4 SV=1 | [more] |
A0A5N6RE49 | 1.8e-29 | 51.11 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_015866 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G68350.1 | 5.6e-15 | 36.88 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |