Spg009958 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg009958
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionacyl-acyl carrier protein thioesterase ATL3, chloroplastic-like
Locationscaffold7: 4268295 .. 4270860 (-)
RNA-Seq ExpressionSpg009958
SyntenySpg009958
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGATTCTGTAACCATCCTTTCCTTGATTCATGGGATTGGAAGTTAACGATTTTTTTTTTTTAAATTTCATTAGATACAGGCAGCACAAATATAGGGGAAACATGGAAAATTACTCAAGGGTAAAAATGGAAGATTGAATTGCACGAAAATAGGTCAAAAATAACAGTTGGCCATTTTTCATTAAAAAATCTGGTTTGGTCATTTTTCAAAACTACACTGTAATTTTTGGCCATTTCTGAGGATATCCCTTTTTTTAAATATCTATATTTGTTCTACGATTTTTCACTTTTTAAAACTTATGAACTAATTATTCAAGAGAGAGGTTAAAAAGAAAACAAAACTATCCATGTAGAATTTTATTTATTTATTTATTTAGTTTAACAACATTTGGGAATAGGAGATTTGAACATCTAAGGTTTTTTTTTTTTTAATAACGAACATCTTAAGCTTTTGGTCGAAAGTGCATACCAATTACCGCTGAATTATACTATTATTTTTGGACGTATATCTATGGAGGATTTTAATTATCCTATTTGATGAGTTTTTGTTATGCATTGAAAACTAATCAGGAAGATAATAGCATACTTAATTAAATATTTAATATTAATTAATTAGTGATTATTTTTAATTAATGTTTGTTAATTATTAACATTTATTTCTAATAACTTTAAATTACTAACTTACAATAAATATATTTTTTTTTAATCAGAATCATATAAAATGTAATGATTTAGTATTAGTTTTAGGTTAATATGTTTATCTAAAAACTATTTTACATATTATTAGTTTAATGGATTATTTTAGTAAACAAAGCTGGGGAGTATCGAAATTTAAATCTCACCGACCTCAAGGGAAAAACTAGATGTCAATTATTACGCCAACAAGAGCTTAGCTCAACTGGCATAACTTTGTACCGATAATCACAGGGTCTATGGTTCGAATCCCCACCCCCACATATTGTCAAAAAAAAAATGTCAATTATTACCAAGCTATATTCAATTGTTGGCTTATTTTAATTGATTGATTGATTATTATAATAATATAATAACATATTTAACCAATGGTTCTATGGTGTAGTGGTTAGCACTCTGGACTTTGAATCCAGCAACCTGGGTTCGACTCCTGGTAGGACCTTTGATTTTAGAAATAGAAATATGGTTTTAAAAAATTGGTTTTTTTTTTGTCCTTATTGTTATTATTATTATTTTTTTATCATTAGGTTAATTTTATGGTTTATTTTGTTCCCTTTCATCAGTATCGACGACTTTTATTTATTTATTCAGTTCAACAACACGTGGAGAATACTTTTCTACTCATGGGTGAGTAAACATCTTTCTAGCAATGGCAACATTAAAGATTTGACGGTCGTTATTTATCTTTATGCATTATCTTCTTCTCTCAATTGTCAAAGCATAATGGTCATGAATCACGGCCATAGATGTATATAAATTTGAAAATTTAGGCCCCTAGCCCTCTCTCTGTCCATGAATGTGTGTTGTCAAGAATCACAAATATAATACATAACCAAACTGATCTCCATTATAATTGCAATAATAAGATGTTGCAGTTGCAGTTGCAGGCTTCCTTCAATCCAATTCAATTCCCACATACCAAAGCCTCCTCATCCTTACGCCTGAGTTCGCCCATGCTCACCAAAACCTCCATCTCTCAAACAGTTGATCTTCACCTCAATCTCAAGGCCGCCAGGATGAATCACTTCCAAGATTTTGAGCTCAAAGTTCGTGATTATGAGCTCGATCAGTTCGGTGTTGTCAACAATGCTGTTTATGCAAATTATTGCTCCAACGGTTACAATCCATCTCTTATACTTACTTCCTCATCTTTTAGATTGTGTATCTATTTGATCTCTAACTTTAGGTTTTTGAATCCTGAAAGTTTGGAAACTGAACTTGTAATTTAACACATGAAAATTTCTGGCTTCGTCCTGGATTATAACCCATCTAAAAATTAAACTTGTTAGATTTGCTCTTCAAGACATTAATAAATCAACAACTTGATTAAATAGGTCGTCAAGAATTGATGGAAAGAATAATAGGCGTCAGTGCTGATGCAGTAGCTCGCAGTGGGAATGCACTGGCTTTATCAGATTTGTCTTTCAAGTTCCTTGCACCACTTAGAGTAAAATACCTTAATTTTTTATTACATATGCTCTATAAATTTTGCATCATACAATAATTTACATAACATTATATACTTTAATTTCTACTCTTGTTGTGTTGATGGATACAATTAGAGTGGAGACAGATTTGTTCTTAAGGTCAGGATCTCAAGCACCACAACGGCTCGCATCTACATCGATCACTTAATTTTCAAGCTTCCAAATATGGAGGTTAATTTTCATTTAATCTCTGTTTACTAAACTTGCTTGCATGGTAATTAACATTATTATAATTTCACTTTGTCTTATTTGATTTCCGTAGCCGATCTTAGAGGCAAAGGCTACTGCAGTTTGGCTCGATCAAAATTATCGTCCAATGCGTATCCCACAAGAATATTTAACCAAATTTGCTCAATTTGTTCGAGATCACGAGTCCAAGTGA

mRNA sequence

ATGATTGATTCTGTAACCATCCTTTCCTTGATTCATGGGATTGGAAGGTCTATGTGGTTAGCACTCTGGACTTTGAATCCAGCAACCTGGGTTCGACTCCTGGCCCCTAGCCCTCTCTCTGTCCATGAATGTGTGTTGTCAAGAATCACAAATATAATACATAACCAAACTGATCTCCATTATAATTGCAATAATAAGATGTTGCAGTTGCAGTTGCAGGCTTCCTTCAATCCAATTCAATTCCCACATACCAAAGCCTCCTCATCCTTACGCCTGAGTTCGCCCATGCTCACCAAAACCTCCATCTCTCAAACAGTTGATCTTCACCTCAATCTCAAGGCCGCCAGGATGAATCACTTCCAAGATTTTGAGCTCAAAGTTCGTGATTATGAGCTCGATCAGTTCGGTGTTGTCAACAATGCTGTTTATGCAAATTATTGCTCCAACGGTTACAATCCATCTCTTATACTTACTTCCTCATCTTTTAGATTGTGTCGTCAAGAATTGATGGAAAGAATAATAGGCGTCAGTGCTGATGCAGTAGCTCGCAGTGGGAATGCACTGGCTTTATCAGATTTGTCTTTCAAGTTCCTTGCACCACTTAGAAGTGGAGACAGATTTGTTCTTAAGGTCAGGATCTCAAGCACCACAACGGCTCGCATCTACATCGATCACTTAATTTTCAAGCTTCCAAATATGGAGCCGATCTTAGAGGCAAAGGCTACTGCAGTTTGGCTCGATCAAAATTATCGTCCAATGCGTATCCCACAAGAATATTTAACCAAATTTGCTCAATTTGTTCGAGATCACGAGTCCAAGTGA

Coding sequence (CDS)

ATGATTGATTCTGTAACCATCCTTTCCTTGATTCATGGGATTGGAAGGTCTATGTGGTTAGCACTCTGGACTTTGAATCCAGCAACCTGGGTTCGACTCCTGGCCCCTAGCCCTCTCTCTGTCCATGAATGTGTGTTGTCAAGAATCACAAATATAATACATAACCAAACTGATCTCCATTATAATTGCAATAATAAGATGTTGCAGTTGCAGTTGCAGGCTTCCTTCAATCCAATTCAATTCCCACATACCAAAGCCTCCTCATCCTTACGCCTGAGTTCGCCCATGCTCACCAAAACCTCCATCTCTCAAACAGTTGATCTTCACCTCAATCTCAAGGCCGCCAGGATGAATCACTTCCAAGATTTTGAGCTCAAAGTTCGTGATTATGAGCTCGATCAGTTCGGTGTTGTCAACAATGCTGTTTATGCAAATTATTGCTCCAACGGTTACAATCCATCTCTTATACTTACTTCCTCATCTTTTAGATTGTGTCGTCAAGAATTGATGGAAAGAATAATAGGCGTCAGTGCTGATGCAGTAGCTCGCAGTGGGAATGCACTGGCTTTATCAGATTTGTCTTTCAAGTTCCTTGCACCACTTAGAAGTGGAGACAGATTTGTTCTTAAGGTCAGGATCTCAAGCACCACAACGGCTCGCATCTACATCGATCACTTAATTTTCAAGCTTCCAAATATGGAGCCGATCTTAGAGGCAAAGGCTACTGCAGTTTGGCTCGATCAAAATTATCGTCCAATGCGTATCCCACAAGAATATTTAACCAAATTTGCTCAATTTGTTCGAGATCACGAGTCCAAGTGA

Protein sequence

MIDSVTILSLIHGIGRSMWLALWTLNPATWVRLLAPSPLSVHECVLSRITNIIHNQTDLHYNCNNKMLQLQLQASFNPIQFPHTKASSSLRLSSPMLTKTSISQTVDLHLNLKAARMNHFQDFELKVRDYELDQFGVVNNAVYANYCSNGYNPSLILTSSSFRLCRQELMERIIGVSADAVARSGNALALSDLSFKFLAPLRSGDRFVLKVRISSTTTARIYIDHLIFKLPNMEPILEAKATAVWLDQNYRPMRIPQEYLTKFAQFVRDHESK
Homology
BLAST of Spg009958 vs. NCBI nr
Match: XP_023541635.1 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023541636.1 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 230.7 bits (587), Expect = 1.5e-56
Identity = 131/223 (58.74%), Postives = 154/223 (69.06%), Query Frame = 0

Query: 72  LQASFNPIQFP----HTKAS-----------------SSLRLSSPMLTKTSISQTVDLHL 131
           LQAS NPIQ P    H K +                 +SLRL SP +T+TSIS +  L  
Sbjct: 2   LQASINPIQSPPPAFHYKTAGLAFPSSLACTISRPSPTSLRLRSPSVTRTSISSSFQLKA 61

Query: 132 NLKAARMNHFQDFELKVRDYELDQFGVVNNAVYANYCSNGYNPSLILTSSSFRLCRQELM 191
                RM+ F D ELKVRDYELDQFGVVNNAVYA+YC +G               R EL+
Sbjct: 62  GKGHYRMDGFLDVELKVRDYELDQFGVVNNAVYASYCQHG---------------RHELL 121

Query: 192 ERIIGVSADAVARSGNALALSDLSFKFLAPLRSGDRFVLKVRISSTTTARIYIDHLIFKL 251
           E  IG+S DAVAR G+ALALS+L+ KFLAPL+SGDRFV+KVRIS  + AR YIDH IFKL
Sbjct: 122 ES-IGLSPDAVARDGDALALSELTLKFLAPLKSGDRFVVKVRISGMSAARFYIDHFIFKL 181

Query: 252 PNMEPILEAKATAVWLDQNYRPMRIPQEYLTKFAQFVRDHESK 274
           PNMEPILEAK TAVWL+++YRP+RIP E+L+KFAQFVRDH+SK
Sbjct: 182 PNMEPILEAKGTAVWLNKSYRPVRIPHEFLSKFAQFVRDHDSK 208

BLAST of Spg009958 vs. NCBI nr
Match: XP_038892747.1 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 229.6 bits (584), Expect = 3.3e-56
Identity = 123/193 (63.73%), Postives = 147/193 (76.17%), Query Frame = 0

Query: 81  FPHTKASSSLRLSSPMLTKTSISQTVDLHLNLKAARMNHFQDFELKVRDYELDQFGVVNN 140
           FP ++ S+SL L SP +T++SI+ + DL        M+ F D ELKVRDYELDQFGVVNN
Sbjct: 31  FPISRPSTSLHLRSPPVTRSSITSSFDLK---PGKGMDGFLDIELKVRDYELDQFGVVNN 90

Query: 141 AVYANYCSNGYNPSLILTSSSFRLCRQELMERIIGVSADAVARSGNALALSDLSFKFLAP 200
           AVYA+YC +G               R EL+E  IG+S DAVAR G+ALALS+LS KFLAP
Sbjct: 91  AVYASYCQHG---------------RHELLES-IGLSPDAVARDGDALALSELSLKFLAP 150

Query: 201 LRSGDRFVLKVRISSTTTARIYIDHLIFKLPNMEPILEAKATAVWLDQNYRPMRIPQEYL 260
           LR+GDRFV+KVRIS T+ AR Y DH IFKLPNMEPILEAK TAVWL+++YRP+RIPQE+L
Sbjct: 151 LRTGDRFVVKVRISGTSAARFYFDHFIFKLPNMEPILEAKGTAVWLNKSYRPVRIPQEFL 204

Query: 261 TKFAQFVRDHESK 274
           +KFAQFVRDHESK
Sbjct: 211 SKFAQFVRDHESK 204

BLAST of Spg009958 vs. NCBI nr
Match: XP_022150479.1 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Momordica charantia])

HSP 1 Score: 228.8 bits (582), Expect = 5.7e-56
Identity = 126/204 (61.76%), Postives = 154/204 (75.49%), Query Frame = 0

Query: 70  LQLQASFNPIQFPHTKASSSLRLSSPMLTKTSISQTVDLHLNLKAARMNHFQDFELKVRD 129
           L + +SF+   +P  + S+S RL SP +T++S SQ  DL+      RM+ F D ELKVRD
Sbjct: 23  LPIPSSFS---WPIRRPSTSFRLRSPPITRSSNSQAFDLN---ATKRMDGFLDVELKVRD 82

Query: 130 YELDQFGVVNNAVYANYCSNGYNPSLILTSSSFRLCRQELMERIIGVSADAVARSGNALA 189
           YELDQFGVVNNAVYA+YC +G               R EL+E  IG+S DAVAR+G+ALA
Sbjct: 83  YELDQFGVVNNAVYASYCQHG---------------RHELLES-IGLSPDAVARTGDALA 142

Query: 190 LSDLSFKFLAPLRSGDRFVLKVRISSTTTARIYIDHLIFKLPNMEPILEAKATAVWLDQN 249
           LS+LS KFLAPLRSGDRFV+KVRISS + AR YIDH IFKLP+MEPILEAK TAVWL++N
Sbjct: 143 LSELSLKFLAPLRSGDRFVVKVRISSMSAARFYIDHFIFKLPDMEPILEAKGTAVWLNKN 202

Query: 250 YRPMRIPQEYLTKFAQFVRDHESK 274
           YRP+RIPQE+L+KFA+F R+HESK
Sbjct: 203 YRPVRIPQEFLSKFAEFARNHESK 204

BLAST of Spg009958 vs. NCBI nr
Match: XP_022968132.1 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Cucurbita maxima] >XP_022968134.1 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-55
Identity = 133/224 (59.38%), Postives = 157/224 (70.09%), Query Frame = 0

Query: 72  LQASFNPIQFP----HTKAS-----------------SSLRLSSPMLTKTSISQTVDLHL 131
           LQAS NPIQ P    H K +                 +SLRL SP +T++SIS +     
Sbjct: 2   LQASINPIQSPPPAFHYKTAGLAFPSSLVCPISRPSPTSLRLRSPSVTRSSISSS----F 61

Query: 132 NLKAAR-MNHFQDFELKVRDYELDQFGVVNNAVYANYCSNGYNPSLILTSSSFRLCRQEL 191
            LKA + M+ F D ELKVRDYELDQFGVVNNAVYA+YC +G               R EL
Sbjct: 62  QLKAGKGMDGFLDVELKVRDYELDQFGVVNNAVYASYCQHG---------------RHEL 121

Query: 192 MERIIGVSADAVARSGNALALSDLSFKFLAPLRSGDRFVLKVRISSTTTARIYIDHLIFK 251
           +E  IG+S DAVAR G+ALALS+LS KFLAPL+SGDRFV+KVRIS  + AR YIDH IFK
Sbjct: 122 LES-IGLSPDAVARDGDALALSELSLKFLAPLKSGDRFVVKVRISGMSAARFYIDHFIFK 181

Query: 252 LPNMEPILEAKATAVWLDQNYRPMRIPQEYLTKFAQFVRDHESK 274
           LPNMEPILEAKATAVWL+++YRP+RIPQE+ +KFAQFVRDH+SK
Sbjct: 182 LPNMEPILEAKATAVWLNKSYRPVRIPQEFQSKFAQFVRDHDSK 205

BLAST of Spg009958 vs. NCBI nr
Match: XP_004135087.1 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 1.7e-55
Identity = 125/196 (63.78%), Postives = 149/196 (76.02%), Query Frame = 0

Query: 79  IQFPHTKASSSLRLSSPMLTKTSISQTVDLHLNLKAAR-MNHFQDFELKVRDYELDQFGV 138
           + FP  + S+SLRL S   T++SIS + D    LKA + M+ F D ELKVRDYELDQFGV
Sbjct: 29  VVFPIARPSTSLRLRSLPATRSSISSSFD----LKAGKGMDSFLDIELKVRDYELDQFGV 88

Query: 139 VNNAVYANYCSNGYNPSLILTSSSFRLCRQELMERIIGVSADAVARSGNALALSDLSFKF 198
           VNNAVYA+YC +G               R EL+E  IG+S DAVAR G+ALALS+LS KF
Sbjct: 89  VNNAVYASYCQHG---------------RHELLES-IGLSPDAVARDGDALALSELSLKF 148

Query: 199 LAPLRSGDRFVLKVRISSTTTARIYIDHLIFKLPNMEPILEAKATAVWLDQNYRPMRIPQ 258
           LAPLRSGD+FV+KVRIS  + AR YIDHLIFKLPNMEPILEAK TAVWL+++YRP+RIPQ
Sbjct: 149 LAPLRSGDKFVVKVRISGISVARFYIDHLIFKLPNMEPILEAKGTAVWLNKSYRPVRIPQ 204

Query: 259 EYLTKFAQFVRDHESK 274
           E+L+KF QFV+DHESK
Sbjct: 209 EFLSKFGQFVQDHESK 204

BLAST of Spg009958 vs. ExPASy Swiss-Prot
Match: S4TE15 (Acyl-acyl carrier protein thioesterase TE3, chloroplastic OS=Humulus lupulus OX=3486 GN=TE3 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.7e-47
Identity = 109/215 (50.70%), Postives = 142/215 (66.05%), Query Frame = 0

Query: 59  LHYNCNNKMLQLQLQASFNPIQFPHTKASSSLRLSSPMLTKTSISQTVDLHLNLKAAR-M 118
           LH   ++  L     +S + + FP T+     RL      +   S    L  +++  + M
Sbjct: 12  LHLPISSLSLSSSSSSSASSVAFPVTRLLIPPRLRVLPNPRRRCSA---LPFDIRGGKGM 71

Query: 119 NHFQDFELKVRDYELDQFGVVNNAVYANYCSNGYNPSLILTSSSFRLCRQELMERIIGVS 178
           + F + ELKVRDYELDQ+GVVNNAVYA+YC +G               R EL+E   G+S
Sbjct: 72  SEFYEVELKVRDYELDQYGVVNNAVYASYCQHG---------------RHELLES-FGLS 131

Query: 179 ADAVARSGNALALSDLSFKFLAPLRSGDRFVLKVRISSTTTARIYIDHLIFKLPNMEPIL 238
            DAVAR+G+ALALS+LS KFLAPLRSGD+FV+KVR+S ++ AR+Y DHLIFKLPN EPIL
Sbjct: 132 CDAVARNGDALALSELSLKFLAPLRSGDKFVVKVRLSGSSAARLYFDHLIFKLPNQEPIL 191

Query: 239 EAKATAVWLDQNYRPMRIPQEYLTKFAQFVRDHES 273
           +AK TAVWLD+NYRP+RIP E  +K  QF+R+ ES
Sbjct: 192 DAKGTAVWLDKNYRPVRIPPEVRSKLVQFLRNEES 207

BLAST of Spg009958 vs. ExPASy Swiss-Prot
Match: Q8W583 (Acyl-acyl carrier protein thioesterase ATL3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT3 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.1e-45
Identity = 93/156 (59.62%), Postives = 111/156 (71.15%), Query Frame = 0

Query: 117 MNHFQDFELKVRDYELDQFGVVNNAVYANYCSNGYNPSLILTSSSFRLCRQELMERIIGV 176
           M+ F + ELKVRDYELDQFGVVNNAVYANYC +G               R E +E  IG+
Sbjct: 50  MSEFHEVELKVRDYELDQFGVVNNAVYANYCQHG---------------RHEFLES-IGI 109

Query: 177 SADAVARSGNALALSDLSFKFLAPLRSGDRFVLKVRISSTTTARIYIDHLIFKLPNMEPI 236
           + D VARSG ALA+S+L+ KFL+PLRSGD+FV+K RIS T+ ARIY DH IFKLPN EPI
Sbjct: 110 NCDEVARSGEALAISELTMKFLSPLRSGDKFVVKARISGTSAARIYFDHFIFKLPNQEPI 169

Query: 237 LEAKATAVWLDQNYRPMRIPQEYLTKFAQFVRDHES 273
           LEAK  AVWLD  YRP+RIP    +KF  F+R  ++
Sbjct: 170 LEAKGIAVWLDNKYRPVRIPSSIRSKFVHFLRQDDA 189

BLAST of Spg009958 vs. ExPASy Swiss-Prot
Match: F4HX80 (Acyl-acyl carrier protein thioesterase ATL4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT4 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.4e-43
Identity = 96/181 (53.04%), Postives = 122/181 (67.40%), Query Frame = 0

Query: 95  PMLTKTSISQTVDLH--LNLKAAR-MNHFQDFELKVRDYELDQFGVVNNAVYANYCSNGY 154
           P++     ++T   H  L+LK  + M+ F + ELKVRDYELDQFGVVNNAVYANYC +G 
Sbjct: 23  PVMLPLRSAKTFKPHTFLDLKGGKEMSEFHEVELKVRDYELDQFGVVNNAVYANYCQHGM 82

Query: 155 NPSLILTSSSFRLCRQELMERIIGVSADAVARSGNALALSDLSFKFLAPLRSGDRFVLKV 214
           +               E +E  IG++ D VARSG ALA+S+L+  FLAPLRSGD+FV+KV
Sbjct: 83  H---------------EFLES-IGINCDEVARSGEALAISELTMNFLAPLRSGDKFVVKV 142

Query: 215 RISSTTTARIYIDHLIFKLPNMEPILEAKATAVWLDQNYRPMRIPQEYLTKFAQFVRDHE 273
            IS T+ ARIY DH I KLPN E ILEAKAT VWLD  +RP+RIP    +KF  F+R ++
Sbjct: 143 NISRTSAARIYFDHSILKLPNQEVILEAKATVVWLDNKHRPVRIPSSIRSKFVHFLRQND 187

BLAST of Spg009958 vs. ExPASy Swiss-Prot
Match: Q9C7I5 (Acyl-acyl carrier protein thioesterase ATL1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT1 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.6e-40
Identity = 88/154 (57.14%), Postives = 104/154 (67.53%), Query Frame = 0

Query: 117 MNHFQDFELKVRDYELDQFGVVNNAVYANYCSNGYNPSLILTSSSFRLCRQELMERIIGV 176
           MN   + ELKVRDYELDQFGVVNNAVYANYC +G               + E ME  IG+
Sbjct: 48  MNGVHEIELKVRDYELDQFGVVNNAVYANYCQHG---------------QHEFME-TIGI 107

Query: 177 SADAVARSGNALALSDLSFKFLAPLRSGDRFVLKVRISSTTTARIYIDHLIFKLPNMEPI 236
           + D V+RSG ALA+S+L+ KFLAPLRSG +FV+K RIS T+  RIY +  IFKLPN EPI
Sbjct: 108 NCDEVSRSGEALAVSELTIKFLAPLRSGCKFVVKTRISGTSMTRIYFEQFIFKLPNQEPI 167

Query: 237 LEAKATAVWLDQNYRPMRIPQEYLTKFAQFVRDH 271
           LEAK  AVWLD+ YRP+ IP    + F  F R H
Sbjct: 168 LEAKGMAVWLDKRYRPVCIPSYIRSNFGHFQRQH 185

BLAST of Spg009958 vs. ExPASy Swiss-Prot
Match: Q9C7I8 (Acyl-acyl carrier protein thioesterase ATL2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT2 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.9e-39
Identity = 85/151 (56.29%), Postives = 100/151 (66.23%), Query Frame = 0

Query: 120 FQDFELKVRDYELDQFGVVNNAVYANYCSNGYNPSLILTSSSFRLCRQELMERIIGVSAD 179
           F + ELKVRDYELDQFGVVNNAVYANYC +G               R E M+  IG++ +
Sbjct: 51  FHEIELKVRDYELDQFGVVNNAVYANYCQHG---------------RHEFMDS-IGINCN 110

Query: 180 AVARSGNALALSDLSFKFLAPLRSGDRFVLKVRISSTTTARIYIDHLIFKLPNMEPILEA 239
            V+RSG ALA+ +L+ KFLAPLRSG RFV+K RIS  +  RIY +  IFKLPN EPILEA
Sbjct: 111 EVSRSGGALAIPELTIKFLAPLRSGCRFVVKTRISGISLVRIYFEQFIFKLPNQEPILEA 170

Query: 240 KATAVWLDQNYRPMRIPQEYLTKFAQFVRDH 271
           K TAVWLD  YRP R+P    + F  F   H
Sbjct: 171 KGTAVWLDNKYRPTRVPSHVRSYFGHFQCQH 185

BLAST of Spg009958 vs. ExPASy TrEMBL
Match: A0A6J1DA66 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111018616 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 2.7e-56
Identity = 126/204 (61.76%), Postives = 154/204 (75.49%), Query Frame = 0

Query: 70  LQLQASFNPIQFPHTKASSSLRLSSPMLTKTSISQTVDLHLNLKAARMNHFQDFELKVRD 129
           L + +SF+   +P  + S+S RL SP +T++S SQ  DL+      RM+ F D ELKVRD
Sbjct: 23  LPIPSSFS---WPIRRPSTSFRLRSPPITRSSNSQAFDLN---ATKRMDGFLDVELKVRD 82

Query: 130 YELDQFGVVNNAVYANYCSNGYNPSLILTSSSFRLCRQELMERIIGVSADAVARSGNALA 189
           YELDQFGVVNNAVYA+YC +G               R EL+E  IG+S DAVAR+G+ALA
Sbjct: 83  YELDQFGVVNNAVYASYCQHG---------------RHELLES-IGLSPDAVARTGDALA 142

Query: 190 LSDLSFKFLAPLRSGDRFVLKVRISSTTTARIYIDHLIFKLPNMEPILEAKATAVWLDQN 249
           LS+LS KFLAPLRSGDRFV+KVRISS + AR YIDH IFKLP+MEPILEAK TAVWL++N
Sbjct: 143 LSELSLKFLAPLRSGDRFVVKVRISSMSAARFYIDHFIFKLPDMEPILEAKGTAVWLNKN 202

Query: 250 YRPMRIPQEYLTKFAQFVRDHESK 274
           YRP+RIPQE+L+KFA+F R+HESK
Sbjct: 203 YRPVRIPQEFLSKFAEFARNHESK 204

BLAST of Spg009958 vs. ExPASy TrEMBL
Match: A0A6J1HST6 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467460 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 6.1e-56
Identity = 133/224 (59.38%), Postives = 157/224 (70.09%), Query Frame = 0

Query: 72  LQASFNPIQFP----HTKAS-----------------SSLRLSSPMLTKTSISQTVDLHL 131
           LQAS NPIQ P    H K +                 +SLRL SP +T++SIS +     
Sbjct: 2   LQASINPIQSPPPAFHYKTAGLAFPSSLVCPISRPSPTSLRLRSPSVTRSSISSS----F 61

Query: 132 NLKAAR-MNHFQDFELKVRDYELDQFGVVNNAVYANYCSNGYNPSLILTSSSFRLCRQEL 191
            LKA + M+ F D ELKVRDYELDQFGVVNNAVYA+YC +G               R EL
Sbjct: 62  QLKAGKGMDGFLDVELKVRDYELDQFGVVNNAVYASYCQHG---------------RHEL 121

Query: 192 MERIIGVSADAVARSGNALALSDLSFKFLAPLRSGDRFVLKVRISSTTTARIYIDHLIFK 251
           +E  IG+S DAVAR G+ALALS+LS KFLAPL+SGDRFV+KVRIS  + AR YIDH IFK
Sbjct: 122 LES-IGLSPDAVARDGDALALSELSLKFLAPLKSGDRFVVKVRISGMSAARFYIDHFIFK 181

Query: 252 LPNMEPILEAKATAVWLDQNYRPMRIPQEYLTKFAQFVRDHESK 274
           LPNMEPILEAKATAVWL+++YRP+RIPQE+ +KFAQFVRDH+SK
Sbjct: 182 LPNMEPILEAKATAVWLNKSYRPVRIPQEFQSKFAQFVRDHDSK 205

BLAST of Spg009958 vs. ExPASy TrEMBL
Match: A0A5A7SVA0 (Acyl-acyl carrier protein thioesterase ATL3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G005840 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.8e-55
Identity = 130/227 (57.27%), Postives = 156/227 (68.72%), Query Frame = 0

Query: 68  LQLQLQASFNPIQ--------------------FPHTKASSSLRLSSPMLTKTSISQTVD 127
           ++  LQAS  PIQ                    FP  + S+SLRL S  +T++SIS +  
Sbjct: 348 IRAMLQASITPIQSPPPIFHEKTNGFPTPPSVVFPSARRSTSLRLQSLPVTRSSISSS-- 407

Query: 128 LHLNLKAAR-MNHFQDFELKVRDYELDQFGVVNNAVYANYCSNGYNPSLILTSSSFRLCR 187
              +LKA + M+ F D ELKVRDYELDQFGVVNNAVYA+YC +G               R
Sbjct: 408 -SFDLKAGKGMDTFLDIELKVRDYELDQFGVVNNAVYASYCQHG---------------R 467

Query: 188 QELMERIIGVSADAVARSGNALALSDLSFKFLAPLRSGDRFVLKVRISSTTTARIYIDHL 247
            EL+E  IG+S DAVAR G+ALALS+LS KFLAPLRSGD+FV+KVRIS  + AR YIDH 
Sbjct: 468 HELLES-IGLSPDAVARDGDALALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHF 527

Query: 248 IFKLPNMEPILEAKATAVWLDQNYRPMRIPQEYLTKFAQFVRDHESK 274
           IFKLPNMEPILEAK TAVWL++NYRP+RIPQE+L+KF QFV+DHE K
Sbjct: 528 IFKLPNMEPILEAKGTAVWLNKNYRPVRIPQEFLSKFGQFVQDHECK 555

BLAST of Spg009958 vs. ExPASy TrEMBL
Match: A0A1S3BG49 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103489290 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 2.3e-55
Identity = 130/223 (58.30%), Postives = 154/223 (69.06%), Query Frame = 0

Query: 72  LQASFNPIQ--------------------FPHTKASSSLRLSSPMLTKTSISQTVDLHLN 131
           LQAS  PIQ                    FP  + S+SLRL S  +T++SIS +     +
Sbjct: 2   LQASITPIQSPPPIFHEKTNGFPTPPSVVFPSARRSTSLRLQSLPVTRSSISSS---SFD 61

Query: 132 LKAAR-MNHFQDFELKVRDYELDQFGVVNNAVYANYCSNGYNPSLILTSSSFRLCRQELM 191
           LKA + M+ F D ELKVRDYELDQFGVVNNAVYA+YC +G               R EL+
Sbjct: 62  LKAGKGMDTFLDIELKVRDYELDQFGVVNNAVYASYCQHG---------------RHELL 121

Query: 192 ERIIGVSADAVARSGNALALSDLSFKFLAPLRSGDRFVLKVRISSTTTARIYIDHLIFKL 251
           E  IG+S DAVAR G+ALALS+LS KFLAPLRSGD+FV+KVRIS  + AR YIDH IFKL
Sbjct: 122 ES-IGLSPDAVARDGDALALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHFIFKL 181

Query: 252 PNMEPILEAKATAVWLDQNYRPMRIPQEYLTKFAQFVRDHESK 274
           PNMEPILEAK TAVWL++NYRP+RIPQE+L+KF QFV+DHE K
Sbjct: 182 PNMEPILEAKGTAVWLNKNYRPVRIPQEFLSKFGQFVQDHECK 205

BLAST of Spg009958 vs. ExPASy TrEMBL
Match: A0A5D3CCR4 (Acyl-acyl carrier protein thioesterase ATL3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001110 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 5.2e-55
Identity = 129/225 (57.33%), Postives = 155/225 (68.89%), Query Frame = 0

Query: 68  LQLQLQASFNPIQ--------------------FPHTKASSSLRLSSPMLTKTSISQTVD 127
           ++  LQAS  PIQ                    FP  + S+SLRL S  +T++SIS +  
Sbjct: 348 IRAMLQASITPIQSPPPIFHEKTNGFPTPPSVVFPSARRSTSLRLQSLPVTRSSISSS-- 407

Query: 128 LHLNLKAAR-MNHFQDFELKVRDYELDQFGVVNNAVYANYCSNGYNPSLILTSSSFRLCR 187
              +LKA + M+ F D ELKVRDYELDQFGVVNNAVYA+YC +G               R
Sbjct: 408 -SFDLKAGKGMDTFLDIELKVRDYELDQFGVVNNAVYASYCQHG---------------R 467

Query: 188 QELMERIIGVSADAVARSGNALALSDLSFKFLAPLRSGDRFVLKVRISSTTTARIYIDHL 247
            EL+E  IG+S DAVAR G+ALALS+LS KFLAPLRSGD+FV+KVRIS  + AR YIDH 
Sbjct: 468 HELLES-IGLSPDAVARDGDALALSELSLKFLAPLRSGDKFVVKVRISGISVARFYIDHF 527

Query: 248 IFKLPNMEPILEAKATAVWLDQNYRPMRIPQEYLTKFAQFVRDHE 272
           IFKLPNMEPILEAK TAVWL++NYRP+RIPQE+L+KF QFV+DHE
Sbjct: 528 IFKLPNMEPILEAKGTAVWLNKNYRPVRIPQEFLSKFGQFVQDHE 553

BLAST of Spg009958 vs. TAIR 10
Match: AT1G68260.1 (Thioesterase superfamily protein )

HSP 1 Score: 184.1 bits (466), Expect = 1.5e-46
Identity = 93/156 (59.62%), Postives = 111/156 (71.15%), Query Frame = 0

Query: 117 MNHFQDFELKVRDYELDQFGVVNNAVYANYCSNGYNPSLILTSSSFRLCRQELMERIIGV 176
           M+ F + ELKVRDYELDQFGVVNNAVYANYC +G               R E +E  IG+
Sbjct: 50  MSEFHEVELKVRDYELDQFGVVNNAVYANYCQHG---------------RHEFLES-IGI 109

Query: 177 SADAVARSGNALALSDLSFKFLAPLRSGDRFVLKVRISSTTTARIYIDHLIFKLPNMEPI 236
           + D VARSG ALA+S+L+ KFL+PLRSGD+FV+K RIS T+ ARIY DH IFKLPN EPI
Sbjct: 110 NCDEVARSGEALAISELTMKFLSPLRSGDKFVVKARISGTSAARIYFDHFIFKLPNQEPI 169

Query: 237 LEAKATAVWLDQNYRPMRIPQEYLTKFAQFVRDHES 273
           LEAK  AVWLD  YRP+RIP    +KF  F+R  ++
Sbjct: 170 LEAKGIAVWLDNKYRPVRIPSSIRSKFVHFLRQDDA 189

BLAST of Spg009958 vs. TAIR 10
Match: AT1G68280.1 (Thioesterase superfamily protein )

HSP 1 Score: 176.4 bits (446), Expect = 3.1e-44
Identity = 96/181 (53.04%), Postives = 122/181 (67.40%), Query Frame = 0

Query: 95  PMLTKTSISQTVDLH--LNLKAAR-MNHFQDFELKVRDYELDQFGVVNNAVYANYCSNGY 154
           P++     ++T   H  L+LK  + M+ F + ELKVRDYELDQFGVVNNAVYANYC +G 
Sbjct: 23  PVMLPLRSAKTFKPHTFLDLKGGKEMSEFHEVELKVRDYELDQFGVVNNAVYANYCQHGM 82

Query: 155 NPSLILTSSSFRLCRQELMERIIGVSADAVARSGNALALSDLSFKFLAPLRSGDRFVLKV 214
           +               E +E  IG++ D VARSG ALA+S+L+  FLAPLRSGD+FV+KV
Sbjct: 83  H---------------EFLES-IGINCDEVARSGEALAISELTMNFLAPLRSGDKFVVKV 142

Query: 215 RISSTTTARIYIDHLIFKLPNMEPILEAKATAVWLDQNYRPMRIPQEYLTKFAQFVRDHE 273
            IS T+ ARIY DH I KLPN E ILEAKAT VWLD  +RP+RIP    +KF  F+R ++
Sbjct: 143 NISRTSAARIYFDHSILKLPNQEVILEAKATVVWLDNKHRPVRIPSSIRSKFVHFLRQND 187

BLAST of Spg009958 vs. TAIR 10
Match: AT1G35290.1 (Thioesterase superfamily protein )

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-41
Identity = 88/154 (57.14%), Postives = 104/154 (67.53%), Query Frame = 0

Query: 117 MNHFQDFELKVRDYELDQFGVVNNAVYANYCSNGYNPSLILTSSSFRLCRQELMERIIGV 176
           MN   + ELKVRDYELDQFGVVNNAVYANYC +G               + E ME  IG+
Sbjct: 48  MNGVHEIELKVRDYELDQFGVVNNAVYANYCQHG---------------QHEFME-TIGI 107

Query: 177 SADAVARSGNALALSDLSFKFLAPLRSGDRFVLKVRISSTTTARIYIDHLIFKLPNMEPI 236
           + D V+RSG ALA+S+L+ KFLAPLRSG +FV+K RIS T+  RIY +  IFKLPN EPI
Sbjct: 108 NCDEVSRSGEALAVSELTIKFLAPLRSGCKFVVKTRISGTSMTRIYFEQFIFKLPNQEPI 167

Query: 237 LEAKATAVWLDQNYRPMRIPQEYLTKFAQFVRDH 271
           LEAK  AVWLD+ YRP+ IP    + F  F R H
Sbjct: 168 LEAKGMAVWLDKRYRPVCIPSYIRSNFGHFQRQH 185

BLAST of Spg009958 vs. TAIR 10
Match: AT1G35250.1 (Thioesterase superfamily protein )

HSP 1 Score: 163.7 bits (413), Expect = 2.1e-40
Identity = 85/151 (56.29%), Postives = 100/151 (66.23%), Query Frame = 0

Query: 120 FQDFELKVRDYELDQFGVVNNAVYANYCSNGYNPSLILTSSSFRLCRQELMERIIGVSAD 179
           F + ELKVRDYELDQFGVVNNAVYANYC +G               R E M+  IG++ +
Sbjct: 51  FHEIELKVRDYELDQFGVVNNAVYANYCQHG---------------RHEFMDS-IGINCN 110

Query: 180 AVARSGNALALSDLSFKFLAPLRSGDRFVLKVRISSTTTARIYIDHLIFKLPNMEPILEA 239
            V+RSG ALA+ +L+ KFLAPLRSG RFV+K RIS  +  RIY +  IFKLPN EPILEA
Sbjct: 111 EVSRSGGALAIPELTIKFLAPLRSGCRFVVKTRISGISLVRIYFEQFIFKLPNQEPILEA 170

Query: 240 KATAVWLDQNYRPMRIPQEYLTKFAQFVRDH 271
           K TAVWLD  YRP R+P    + F  F   H
Sbjct: 171 KGTAVWLDNKYRPTRVPSHVRSYFGHFQCQH 185

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023541635.11.5e-5658.74acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like isoform X1 [Cucu... [more]
XP_038892747.13.3e-5663.73acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Benincasa hispi... [more]
XP_022150479.15.7e-5661.76acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Momordica chara... [more]
XP_022968132.11.3e-5559.38acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Cucurbita maxim... [more]
XP_004135087.11.7e-5563.78acyl-acyl carrier protein thioesterase ATL3, chloroplastic [Cucumis sativus][more]
Match NameE-valueIdentityDescription
S4TE151.7e-4750.70Acyl-acyl carrier protein thioesterase TE3, chloroplastic OS=Humulus lupulus OX=... [more]
Q8W5832.1e-4559.62Acyl-acyl carrier protein thioesterase ATL3, chloroplastic OS=Arabidopsis thalia... [more]
F4HX804.4e-4353.04Acyl-acyl carrier protein thioesterase ATL4, chloroplastic OS=Arabidopsis thalia... [more]
Q9C7I51.6e-4057.14Acyl-acyl carrier protein thioesterase ATL1, chloroplastic OS=Arabidopsis thalia... [more]
Q9C7I82.9e-3956.29Acyl-acyl carrier protein thioesterase ATL2, chloroplastic OS=Arabidopsis thalia... [more]
Match NameE-valueIdentityDescription
A0A6J1DA662.7e-5661.76acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Momordica cha... [more]
A0A6J1HST66.1e-5659.38acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Cucurbita max... [more]
A0A5A7SVA01.8e-5557.27Acyl-acyl carrier protein thioesterase ATL3 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BG492.3e-5558.30acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Cucumis melo ... [more]
A0A5D3CCR45.2e-5557.33Acyl-acyl carrier protein thioesterase ATL3 OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
AT1G68260.11.5e-4659.62Thioesterase superfamily protein [more]
AT1G68280.13.1e-4453.04Thioesterase superfamily protein [more]
AT1G35290.11.1e-4157.14Thioesterase superfamily protein [more]
AT1G35250.12.1e-4056.29Thioesterase superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006683Thioesterase domainPFAMPF030614HBTcoord: 169..234
e-value: 2.6E-6
score: 27.7
NoneNo IPR availableGENE3D3.10.129.10Hotdog Thioesterasecoord: 110..270
e-value: 2.0E-25
score: 91.4
NoneNo IPR availablePANTHERPTHR317934-HYDROXYBENZOYL-COA THIOESTERASE FAMILY MEMBERcoord: 84..272
NoneNo IPR availablePANTHERPTHR31793:SF27ACYL-ACYL CARRIER PROTEIN THIOESTERASE ATL1, CHLOROPLASTIC-RELATEDcoord: 84..272
NoneNo IPR availableCDDcd005864HBTcoord: 123..247
e-value: 3.0311E-21
score: 84.1948
IPR029069HotDog domain superfamilySUPERFAMILY54637Thioesterase/thiol ester dehydrase-isomerasecoord: 120..271

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg009958.1Spg009958.1mRNA