Spg009958 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGATTCTGTAACCATCCTTTCCTTGATTCATGGGATTGGAAGTTAACGATTTTTTTTTTTTAAATTTCATTAGATACAGGCAGCACAAATATAGGGGAAACATGGAAAATTACTCAAGGGTAAAAATGGAAGATTGAATTGCACGAAAATAGGTCAAAAATAACAGTTGGCCATTTTTCATTAAAAAATCTGGTTTGGTCATTTTTCAAAACTACACTGTAATTTTTGGCCATTTCTGAGGATATCCCTTTTTTTAAATATCTATATTTGTTCTACGATTTTTCACTTTTTAAAACTTATGAACTAATTATTCAAGAGAGAGGTTAAAAAGAAAACAAAACTATCCATGTAGAATTTTATTTATTTATTTATTTAGTTTAACAACATTTGGGAATAGGAGATTTGAACATCTAAGGTTTTTTTTTTTTTAATAACGAACATCTTAAGCTTTTGGTCGAAAGTGCATACCAATTACCGCTGAATTATACTATTATTTTTGGACGTATATCTATGGAGGATTTTAATTATCCTATTTGATGAGTTTTTGTTATGCATTGAAAACTAATCAGGAAGATAATAGCATACTTAATTAAATATTTAATATTAATTAATTAGTGATTATTTTTAATTAATGTTTGTTAATTATTAACATTTATTTCTAATAACTTTAAATTACTAACTTACAATAAATATATTTTTTTTTAATCAGAATCATATAAAATGTAATGATTTAGTATTAGTTTTAGGTTAATATGTTTATCTAAAAACTATTTTACATATTATTAGTTTAATGGATTATTTTAGTAAACAAAGCTGGGGAGTATCGAAATTTAAATCTCACCGACCTCAAGGGAAAAACTAGATGTCAATTATTACGCCAACAAGAGCTTAGCTCAACTGGCATAACTTTGTACCGATAATCACAGGGTCTATGGTTCGAATCCCCACCCCCACATATTGTCAAAAAAAAAATGTCAATTATTACCAAGCTATATTCAATTGTTGGCTTATTTTAATTGATTGATTGATTATTATAATAATATAATAACATATTTAACCAATGGTTCTATGGTGTAGTGGTTAGCACTCTGGACTTTGAATCCAGCAACCTGGGTTCGACTCCTGGTAGGACCTTTGATTTTAGAAATAGAAATATGGTTTTAAAAAATTGGTTTTTTTTTTGTCCTTATTGTTATTATTATTATTTTTTTATCATTAGGTTAATTTTATGGTTTATTTTGTTCCCTTTCATCAGTATCGACGACTTTTATTTATTTATTCAGTTCAACAACACGTGGAGAATACTTTTCTACTCATGGGTGAGTAAACATCTTTCTAGCAATGGCAACATTAAAGATTTGACGGTCGTTATTTATCTTTATGCATTATCTTCTTCTCTCAATTGTCAAAGCATAATGGTCATGAATCACGGCCATAGATGTATATAAATTTGAAAATTTAGGCCCCTAGCCCTCTCTCTGTCCATGAATGTGTGTTGTCAAGAATCACAAATATAATACATAACCAAACTGATCTCCATTATAATTGCAATAATAAGATGTTGCAGTTGCAGTTGCAGGCTTCCTTCAATCCAATTCAATTCCCACATACCAAAGCCTCCTCATCCTTACGCCTGAGTTCGCCCATGCTCACCAAAACCTCCATCTCTCAAACAGTTGATCTTCACCTCAATCTCAAGGCCGCCAGGATGAATCACTTCCAAGATTTTGAGCTCAAAGTTCGTGATTATGAGCTCGATCAGTTCGGTGTTGTCAACAATGCTGTTTATGCAAATTATTGCTCCAACGGTTACAATCCATCTCTTATACTTACTTCCTCATCTTTTAGATTGTGTATCTATTTGATCTCTAACTTTAGGTTTTTGAATCCTGAAAGTTTGGAAACTGAACTTGTAATTTAACACATGAAAATTTCTGGCTTCGTCCTGGATTATAACCCATCTAAAAATTAAACTTGTTAGATTTGCTCTTCAAGACATTAATAAATCAACAACTTGATTAAATAGGTCGTCAAGAATTGATGGAAAGAATAATAGGCGTCAGTGCTGATGCAGTAGCTCGCAGTGGGAATGCACTGGCTTTATCAGATTTGTCTTTCAAGTTCCTTGCACCACTTAGAGTAAAATACCTTAATTTTTTATTACATATGCTCTATAAATTTTGCATCATACAATAATTTACATAACATTATATACTTTAATTTCTACTCTTGTTGTGTTGATGGATACAATTAGAGTGGAGACAGATTTGTTCTTAAGGTCAGGATCTCAAGCACCACAACGGCTCGCATCTACATCGATCACTTAATTTTCAAGCTTCCAAATATGGAGGTTAATTTTCATTTAATCTCTGTTTACTAAACTTGCTTGCATGGTAATTAACATTATTATAATTTCACTTTGTCTTATTTGATTTCCGTAGCCGATCTTAGAGGCAAAGGCTACTGCAGTTTGGCTCGATCAAAATTATCGTCCAATGCGTATCCCACAAGAATATTTAACCAAATTTGCTCAATTTGTTCGAGATCACGAGTCCAAGTGA ATGATTGATTCTGTAACCATCCTTTCCTTGATTCATGGGATTGGAAGGTCTATGTGGTTAGCACTCTGGACTTTGAATCCAGCAACCTGGGTTCGACTCCTGGCCCCTAGCCCTCTCTCTGTCCATGAATGTGTGTTGTCAAGAATCACAAATATAATACATAACCAAACTGATCTCCATTATAATTGCAATAATAAGATGTTGCAGTTGCAGTTGCAGGCTTCCTTCAATCCAATTCAATTCCCACATACCAAAGCCTCCTCATCCTTACGCCTGAGTTCGCCCATGCTCACCAAAACCTCCATCTCTCAAACAGTTGATCTTCACCTCAATCTCAAGGCCGCCAGGATGAATCACTTCCAAGATTTTGAGCTCAAAGTTCGTGATTATGAGCTCGATCAGTTCGGTGTTGTCAACAATGCTGTTTATGCAAATTATTGCTCCAACGGTTACAATCCATCTCTTATACTTACTTCCTCATCTTTTAGATTGTGTCGTCAAGAATTGATGGAAAGAATAATAGGCGTCAGTGCTGATGCAGTAGCTCGCAGTGGGAATGCACTGGCTTTATCAGATTTGTCTTTCAAGTTCCTTGCACCACTTAGAAGTGGAGACAGATTTGTTCTTAAGGTCAGGATCTCAAGCACCACAACGGCTCGCATCTACATCGATCACTTAATTTTCAAGCTTCCAAATATGGAGCCGATCTTAGAGGCAAAGGCTACTGCAGTTTGGCTCGATCAAAATTATCGTCCAATGCGTATCCCACAAGAATATTTAACCAAATTTGCTCAATTTGTTCGAGATCACGAGTCCAAGTGA ATGATTGATTCTGTAACCATCCTTTCCTTGATTCATGGGATTGGAAGGTCTATGTGGTTAGCACTCTGGACTTTGAATCCAGCAACCTGGGTTCGACTCCTGGCCCCTAGCCCTCTCTCTGTCCATGAATGTGTGTTGTCAAGAATCACAAATATAATACATAACCAAACTGATCTCCATTATAATTGCAATAATAAGATGTTGCAGTTGCAGTTGCAGGCTTCCTTCAATCCAATTCAATTCCCACATACCAAAGCCTCCTCATCCTTACGCCTGAGTTCGCCCATGCTCACCAAAACCTCCATCTCTCAAACAGTTGATCTTCACCTCAATCTCAAGGCCGCCAGGATGAATCACTTCCAAGATTTTGAGCTCAAAGTTCGTGATTATGAGCTCGATCAGTTCGGTGTTGTCAACAATGCTGTTTATGCAAATTATTGCTCCAACGGTTACAATCCATCTCTTATACTTACTTCCTCATCTTTTAGATTGTGTCGTCAAGAATTGATGGAAAGAATAATAGGCGTCAGTGCTGATGCAGTAGCTCGCAGTGGGAATGCACTGGCTTTATCAGATTTGTCTTTCAAGTTCCTTGCACCACTTAGAAGTGGAGACAGATTTGTTCTTAAGGTCAGGATCTCAAGCACCACAACGGCTCGCATCTACATCGATCACTTAATTTTCAAGCTTCCAAATATGGAGCCGATCTTAGAGGCAAAGGCTACTGCAGTTTGGCTCGATCAAAATTATCGTCCAATGCGTATCCCACAAGAATATTTAACCAAATTTGCTCAATTTGTTCGAGATCACGAGTCCAAGTGA MIDSVTILSLIHGIGRSMWLALWTLNPATWVRLLAPSPLSVHECVLSRITNIIHNQTDLHYNCNNKMLQLQLQASFNPIQFPHTKASSSLRLSSPMLTKTSISQTVDLHLNLKAARMNHFQDFELKVRDYELDQFGVVNNAVYANYCSNGYNPSLILTSSSFRLCRQELMERIIGVSADAVARSGNALALSDLSFKFLAPLRSGDRFVLKVRISSTTTARIYIDHLIFKLPNMEPILEAKATAVWLDQNYRPMRIPQEYLTKFAQFVRDHESK Homology
BLAST of Spg009958 vs. NCBI nr
Match: XP_023541635.1 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023541636.1 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 230.7 bits (587), Expect = 1.5e-56 Identity = 131/223 (58.74%), Postives = 154/223 (69.06%), Query Frame = 0
BLAST of Spg009958 vs. NCBI nr
Match: XP_038892747.1 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 229.6 bits (584), Expect = 3.3e-56 Identity = 123/193 (63.73%), Postives = 147/193 (76.17%), Query Frame = 0
BLAST of Spg009958 vs. NCBI nr
Match: XP_022150479.1 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Momordica charantia]) HSP 1 Score: 228.8 bits (582), Expect = 5.7e-56 Identity = 126/204 (61.76%), Postives = 154/204 (75.49%), Query Frame = 0
BLAST of Spg009958 vs. NCBI nr
Match: XP_022968132.1 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Cucurbita maxima] >XP_022968134.1 acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 227.6 bits (579), Expect = 1.3e-55 Identity = 133/224 (59.38%), Postives = 157/224 (70.09%), Query Frame = 0
BLAST of Spg009958 vs. NCBI nr
Match: XP_004135087.1 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic [Cucumis sativus]) HSP 1 Score: 227.3 bits (578), Expect = 1.7e-55 Identity = 125/196 (63.78%), Postives = 149/196 (76.02%), Query Frame = 0
BLAST of Spg009958 vs. ExPASy Swiss-Prot
Match: S4TE15 (Acyl-acyl carrier protein thioesterase TE3, chloroplastic OS=Humulus lupulus OX=3486 GN=TE3 PE=2 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.7e-47 Identity = 109/215 (50.70%), Postives = 142/215 (66.05%), Query Frame = 0
BLAST of Spg009958 vs. ExPASy Swiss-Prot
Match: Q8W583 (Acyl-acyl carrier protein thioesterase ATL3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT3 PE=2 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 2.1e-45 Identity = 93/156 (59.62%), Postives = 111/156 (71.15%), Query Frame = 0
BLAST of Spg009958 vs. ExPASy Swiss-Prot
Match: F4HX80 (Acyl-acyl carrier protein thioesterase ATL4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT4 PE=2 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 4.4e-43 Identity = 96/181 (53.04%), Postives = 122/181 (67.40%), Query Frame = 0
BLAST of Spg009958 vs. ExPASy Swiss-Prot
Match: Q9C7I5 (Acyl-acyl carrier protein thioesterase ATL1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT1 PE=1 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.6e-40 Identity = 88/154 (57.14%), Postives = 104/154 (67.53%), Query Frame = 0
BLAST of Spg009958 vs. ExPASy Swiss-Prot
Match: Q9C7I8 (Acyl-acyl carrier protein thioesterase ATL2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ALT2 PE=2 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 2.9e-39 Identity = 85/151 (56.29%), Postives = 100/151 (66.23%), Query Frame = 0
BLAST of Spg009958 vs. ExPASy TrEMBL
Match: A0A6J1DA66 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111018616 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 2.7e-56 Identity = 126/204 (61.76%), Postives = 154/204 (75.49%), Query Frame = 0
BLAST of Spg009958 vs. ExPASy TrEMBL
Match: A0A6J1HST6 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467460 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 6.1e-56 Identity = 133/224 (59.38%), Postives = 157/224 (70.09%), Query Frame = 0
BLAST of Spg009958 vs. ExPASy TrEMBL
Match: A0A5A7SVA0 (Acyl-acyl carrier protein thioesterase ATL3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G005840 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 1.8e-55 Identity = 130/227 (57.27%), Postives = 156/227 (68.72%), Query Frame = 0
BLAST of Spg009958 vs. ExPASy TrEMBL
Match: A0A1S3BG49 (acyl-acyl carrier protein thioesterase ATL3, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103489290 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 2.3e-55 Identity = 130/223 (58.30%), Postives = 154/223 (69.06%), Query Frame = 0
BLAST of Spg009958 vs. ExPASy TrEMBL
Match: A0A5D3CCR4 (Acyl-acyl carrier protein thioesterase ATL3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001110 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 5.2e-55 Identity = 129/225 (57.33%), Postives = 155/225 (68.89%), Query Frame = 0
BLAST of Spg009958 vs. TAIR 10
Match: AT1G68260.1 (Thioesterase superfamily protein ) HSP 1 Score: 184.1 bits (466), Expect = 1.5e-46 Identity = 93/156 (59.62%), Postives = 111/156 (71.15%), Query Frame = 0
BLAST of Spg009958 vs. TAIR 10
Match: AT1G68280.1 (Thioesterase superfamily protein ) HSP 1 Score: 176.4 bits (446), Expect = 3.1e-44 Identity = 96/181 (53.04%), Postives = 122/181 (67.40%), Query Frame = 0
BLAST of Spg009958 vs. TAIR 10
Match: AT1G35290.1 (Thioesterase superfamily protein ) HSP 1 Score: 167.9 bits (424), Expect = 1.1e-41 Identity = 88/154 (57.14%), Postives = 104/154 (67.53%), Query Frame = 0
BLAST of Spg009958 vs. TAIR 10
Match: AT1G35250.1 (Thioesterase superfamily protein ) HSP 1 Score: 163.7 bits (413), Expect = 2.1e-40 Identity = 85/151 (56.29%), Postives = 100/151 (66.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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