Spg009936 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg009936
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	tetratricopeptide repeat protein 5-like
Location	scaffold7: 4605184 .. 4617393 (-)
RNA-Seq Expression	Spg009936
Synteny	Spg009936

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAGTCGATTCCTCTGCTGCCCTGCACAGAAAGCAGAAAGCAACCACATGCTACTCTGTAATTAAACTAGTCAATTATAAAAGAATTGGTACTTAGATTTCTTTGATAATGGAAAGCTAAAGAGAAGTACCGAGACAATCTATCCCAAGTGTTTATGAACTCCTAATCCATGTCCTCCAAAACTTTCCTACTCACATTCCAAACTCCCCACAAATTTGCAAATACTACACATTAACAAATGATATTAAACTTCTCTTTGAGGGGTGAGCAGGAACGAACTGGAAATTCTTTTTTTTTTTTTTTTCCATTCAGGAATGAGCTACCCGTGAAAGTCTAAAGGTCTCTCATACTTCTCTCTGGAATTCCTCGAACAAAGCTGAAGACAATCCAATTATAGTTTGTGGAATTTAAAGTAATGTCTTTGTCTAGGCATTAAGACTTCTTTGAGGTTGGTTTGGTATACCAGTCTGGACGATTTAAAAGCAATTATATGCAATGAGAGAATTGTCGTTTTTTATACAAACAAGATGTAATCTGCTTTCTTTAAATTGTTATATCTAGATGAAAATATACTACCATCAAAATTGAATTTTTCTTTCACCTTCATACTGAATAGTTGTTGGTTTTCCAATTTTTTAAATAAGGAAGTCGGGATGCCATTAGAGTACAGAATTTGAACTTTGCGGATGAAGTTTAAACTACTATCCACTGAAATTAGCTCATCTTGGAAACAGTGCATCCATTGGAGGAGGGAATTTGAATTAGCTTCCCCACCTCCCCCCTTTTAACAATGTTATAGACCCAGTTTTGTTTTTCCCTCCAAATAAATAGAAATTTTCTTATCACTAACTTGCTATTTTGTTCCAATTTCTGATTGACCATGATAAAGAACATATATGTTGCTCATCTCATCTGTTTATCCAAAATTTTGTTCCTGCTATAGGTACCGAGAATGAGGCAAAACTTGTAGAGGAAAGCATTCAACACGCAAAAGAAGCAGTTACTTTGGATGTGAAAGATGGAAACTCTTGGTGTAAGATTACACATCAAAGCATGCCATAACATTATGTTTATTTTTAATTATAACTTGCATAGGTTTTATTTGTTATATGCCATGGCTCTGGTAAGTGCTACCCTTCTTTGTGATTAACTTATTTGTAGGTCTTCTGTAATTGTTTGGATAACTTTCTTACAACATACTCAGAACTGAAATATTTTTTAATGTGCATGTTCATTCCTTGATGTTTGTATTGAATATCGTCTTCCTATATCTTCCAGCTTATAATCCTTGCAATTTTTTTTATAACATGTCCACACTAATTTGTCTTGCAGATAATCTAGGAAATGCATGCCTTACAAGTTTTTTTGTTACTGGAGCGTGGGATCACAATAAGCTTCTGCAATCTCTGAAGGCATATCAAAATGCGGTAGGTGTCTATTGTAACAGAACAGTTGTGCCCACATTTCATTCTAAATTTCCATAACTTAATTTATGAAACAGATATAATCCAACTCTTTTATTAAGTTTTGGGTTTATTTTAAAGTTTTAAAATTTGCTAATGTATAATAATATTTTGCAGGAAAAAGATGAAAAAATGATGTCAAATCCAGACTTGTATTTTAATTGTGCAACTGTAAGTTAAATTTCTCTTCTCTTTTCAATTTGTTTACCTCTAATGTGATTGCTTTCTCTTTATAAGTTTATCAGGTAGTTAAACTTTAAACCTTCTTAAAATGTATAATATTCTACCATTTTGGTTATTCACATTCAATCAATGGATGAAATCTATTTCAGCTAGACAAAGATTTCTTCTGTAACGGGCAGAAATTGGTTATGATAAACTTGTCAACTTGTTTGGTCAATTGAGGAATGGGGATTTACAGTGTATCAGTGTAGGAAGAGGTTTGTGAGGGTGAATAAGGATAATTACAGAGTAGCATGTGGTTGCACACATATTTGAGAATCTGAACCCGATATTTGGTTGTCAAGTTGAGAAATAAGTTTTAAGTATGAATTGAGTAATGTTCCCAAATATGATTTGGAGACAAATTTTCAGTTACAGGAAAAGAGAGGAAGAAAACAATGGTGTCAAGCAGTGGAAAGACTGACCTAATTATTCGGTAGAGAGCTTTTGTTTATGAGTTGAATGTGAATCAAATAATATAAGAGAGCTTTTCTATTTCATCCTTTCCTACACGTTGCTAGCTTTTGTAAATCTCTCTTCTACATATTGTTGTTATTGAGACAGTCAAATTCATTAACTTCTCCTAAACCTGCATAATTTTTGACTCGTTCTTCTTTTAGGTTAACAAATATCTGGAGAATTATGAGAGGGCCCTAAGTGGATTTGAGGCTGCTGCTTTGAAGGATCCTAGTCTTAGTGCTACTAGAGAGGTCCAAAAGATGGTGAATCTTCTTGACAAATTGGAGAACATGTTGAAGGTATACTTACATCTTTGCGAATAAATACATGTTTTTTTTTTGTTGGCACAAGCTCCTGTTGTTTTTAAACACATACCTTCCCTAGACTTTCGTCGCCCTCTCACTTATCAAAAAGGCAAGAGGTCTTTCATCTCCTTTCCCTTTTGGATGACTAGTCGATTTGTCATGGGAGAAGGGACTCTAGGTTTTGGACCTCGGAGCCTTTTGAGGGCTTTTTCTTTCCTTTTTTTTTTTCCTTCTTCTTCTGGTCTCTTTCTATTCGTCTTCCTCGTAGGGGAGTCTCCATTTTCTCCTCTTTGTAGAAGGTTAAAATCTCCAAGAAAGTGAAGTTTTTTGCCTAGAAAGTTTTACATGGTAGGGTGAACACTCAGGATCGGATCCAAAGATTCTCCTCTTTCGTGTTGCGGCCACAATGGTGTGTCCTTTGTAGGAGTCAGAAGGAGGACCTTCATTATTTACTTTGGGATTGTCCATTTTGCTCTATTTGGTGTCAGTTCTTCAGGGTTTTTGGGGTTGCTTCAGCTCGTAACATTGATTGCTCCTCTATATTTGAGGAAGTTCTTTGGCATCCCCCTTTTCATGGCAAAGGGAGAGTCCTTTGGCAAGCGTGCTTTTTTGCTACTTTGTGGGGTATTTTAGGGAAGCAACGTTGTACTTTAGATGAGGTCGAATGGCAGCCTATCTCTTCTAATCAAGCAAGCTGGCTTGAAAGACCGTTTGAGAGGGAGGAAATATGGAAATCTATGATGATTCTAGGAGCTCAAAAAACTCCAGGTCTGGACGGTTTTACGGGGGAGTTTTTGAAAAAATCTTGGAACACCATTAAAGAAGATCTATTTAAGGTGTTCCAGGAGTTTTTTGAGAACGGTATTATAAACAAAAGGACCAACGAAACATACATCTGCTTGATTCCCAAGAAAAAAGTGGCCAACAAGGTTAGTGACTTTCGCCCCATTAGCCTTATTACCTTGCTGTACAAAGTTATATCCAAGGTTTTAGCTGAAAGAATCAGAGTTATTCTCCCCTCTACCATAAATCAGTCCCAAATGGCCTTCGTAGAAGGTAGACAGATTATGGACGCTATCCTGATGGCAGCTGAGGCAGTAGATGATTACCGAGTGAGAAAAAAGAAAGGCTTTGTGATAAAGGTTGACTTCGAAAAAGCCTATGACAAGGTGGATTGGGAGTTTTTGGACTATATTCTTGAGTCCAAAGGCTTTGGTGATAGGTGGAGAAGTTGGATGAAAGGCTGCTGTGTGAGCTCTAATTTTTCTGTGTTGATAAATTCAAGACCCAGAGGGAAAATTTTTGCTTCTAGAGGCATTAGACAAGGTGACCCATTGTCTCCTTTTCTTTTTACCATCGTGGCCGACTCTCTTAGTCGTTTTATTCGGGTTTGCAGCAACAAAGGGTTTATTAAAGGGTTCAAGGTTGGCAAGGAAGAGGTGGAGATGACCCATATTCAATTTGCAGACGACACTCTCTTGTTCAGTGATAGTAATTCTCAGTCTATGAAGAACTGGCATACCTTCTTAGAGTTCTTTGAGCAAGCCTGTGGGCTTTCTATTAACATGAGTAAAACCAGTATTATTGGCATAAACATGGAGAAGAGGAAACTATTCGAGTGGCTGAGATGATGGGTTGCAAAGTAGAATGCTTTCCCTTTAAATACCTTGGAGTTCCAGTCGGGGGAAGACCAAAGGTAGCCTCTTTCTGGGACCCGGATATGGAAGCTATTCGCTCTAAATTGGCTCTTTGGAAGGGCTTCCCGATTTCAAAGGGGGGAAGAACTACTCTCCTTAAAGCAGTCCTCTCAAGTATCCCTGCTTATTTCCTTTCCATTTTCAGGATCCCTGTGGGGGTTGGCAAAGATATCGAGAAAATTTTCAGAAAATTCCTTTGGAAGGGTGGCGATGGTTATAAAGGTTCCCATTTAGTAAGATGGGATTATGTTACAACTCCGCTTCACCTTGGTGGCTTAGGCATTGATAGTTTAAGAGCCAAAAATGTTGCGTTGATCTCAAAATGGTAATGGAGGTACGAAAATGAACCAGAGGCTCTGTGGAGAAAAGTTATCCAAAGCAAATATGGATCTAATTTTATCTGGGAACAACTCTCCTATAAAAGGTGGCAATCCTCGTGCAGTCCTTGGAAAGATATAGCCAGCATGGTTGAGTTCTACAAAAATAATTGAAGATACAAGGTGGGTAGGGGGGATAATGTATTTTTCTGGCATGATGCGTGGTTATCTGATAGGCCCCTAAAAGAGTTGTTCCCCTCCATTTTTAGGCTTTCTGCGGTTAAGGACAACAAAGTCAGTGAGCTATGGAATGATTCCACTTGGGATCTCAGTCTTAGAAGAGGCATTTTTGATAGGGAAATGAACGACTGGATGACTTTGTTGTCTCTCTTATCCCAATTCAACCTCAATGGTATCGCAGACTGTGTCGTTTGGAAGCTGGAGGGATCCGGAAAATTCTCTGTCAAATCCGCCCTTATGGCCCTGCAGAAGAAAAGAAGAGTTCTGGAAGAAGGCTTATGTGATCAGATATGGGATGGCCTTATTCCTAAGAGGGTGAAATTTTTCGTTTGGACTCTTTCTCACCATAGCATTAATACTATGGATAAGGTGCAGACCAGATTTCCTTGTCTTCAAGTCAGCCCCAATGTTTGTGTAATGTGTATGAAGAATGAAGAATCGGCCCCCCACCTGTTATTACATTGTGAATTCGCTGAGAAAGTGTGGAATTTTTTTTCTAGGATTTTCGGTATGAGCAGTTGCAAACCCAAGTGCGTGGTCAGTTGGTTGAGTGAAGCCCTAAATGGCTGGTGGTTAAAGGGCAAAGCCAAAGTCCTCTGGCGAAATCTCTCAAGGGCTATTCTTTGGCATCTGTGGAAGGAAAGAAATTCAAGAGTCTTCGCTGATAAGTATACGCCTTTCAATATTTTTTGTGGTGTTGTACAGCTTTCGGCCTCCAATTGGTGCGCCCAAGATAGTGTTTTCTCTAATTACTCTGCTGCCATGATGAACCTTCATTGGAAGGCTTTTTTGTAGTTCCTTTTGGAGAAGGGATGCCTTATCCCTTTGTCCTTTGGTTGTTTTTGTGGCTCTTTTGTGAATGAAAGTTATCGTTTCTTCTCAAAAAAAAATTTTAGAGGGGTGGAGAAATCCACGTCTGAGCTTTGGGAGGATTAGATTTAACTCGTCTTTGTATAGGACACCATCGAAAGACCTAGAAGATTACAGAAAAAGTTTCCAATCGATTGGATGTAGAAAAAGAGAGTGATTACAGAACTGTTTGGGTAAAAGAACTCCAACTATACATAAGAAAGGAATGCAACCCAAAAGAGCTTTAAGATCTCTTCTCGTGGAAGATTTGTTTATTTCTTTCCGTCCAAAGCTTCCCATAAAGTAGCAAAAGTTGCGTCCTTAGTCCTCGACTCTGAAAGGCCCACCAAAATATTAAGCAAGAAGTCATTAATTGATTTGATGAGGAAGAGGCATGTAAAGTTGAAACCTGTTGCAAAATTTCATCCAGAATCTCCTAGAGTAAGCACAGACCAACGAGAGAACCATCTTCCTTACTGTCCTTACAGGAACTAAGAGGAAAGAGAGACCTTGAATTGAAGCAAGTTTCTCATTAGGTTCATGCATTTGTTTTTTCATTTGCCAAATACAAAACATGTACGAACTTAAACAGACTTCGTCACTATGTCATTAATTTTATAGAAAAATAAGAAAATAATAACATGACTAAATGTATGCAGATTTTCCTAAGACGTAGTTTACAGATGATTGTGAGACCCCCAATCACGAAAACATATAGTAGAAGGGGTAAAAAGGGTAATACACCAGAAACGGTTAGAGAAGAGAGAGAAGGGGACCACCTGTAGGGATTGTGCGCACTTATATGGCTGAGGGAGTAATTCTGTAGGCATCTTTTGGAAAGTTTTTGGCTTAGACGAGTGTCTGAGAGGGAGAGACCAGCACTCTCGAATTGCTGGGAGTTTGTTCTTGTTGTTTGGCTATTTTGAACTATTCCCTTAATGAAATAACCCCTCTGCTCAAGGAAGAACTCACTGAGGCAGAGTTGGTTTTCAGGCTGTGTTGTGAGTCTTTTCTATTAGATTTTCTTGCTGTTTTGGTCTGTTTGGTGCAGGAATCGAGTTAGGATACCTAACAGATTTACATGTTATTTTGTCTTCTAGGCACATGCTAAAACCCGAAGAGTTGCATCTTTGGCATCATCGGTGGATATTGTTTGTTGTAAGTTTTTACCAGACCTTTTGTTTATTTATCTCTTCTGCATTCAATATTCACAATTTGCTAATCACCAAATTTTGTTTTGGGTTTTTCCCTTTTTAATTCATTATTTACTGATTGTTACATGTTTGTTTTAACTTTTTAAGCGAATTCCTCATACAAGAGAGCCACTGTAGACCATCTGTCAGAGGGTCTGAACAAAACAGTTGCAGTAATTGGAAAGGTCCTGTTCTTCATTAAGCATGATAGTCTTGCCCCACTGTAAGTTCCCCCATGTGACTCGACTCTGATGAGACCAATTTCCTTGGCTAGTTAATCCAAACACTTCCTTCATTTGTCCTAATGAAAGTTCGGTTTTCCATCAACAGAATCTAGCTACTTCTTAATGCTCATGTTTTAGCTATTACAGCCGCTTCCGTATATTCTCTTCTTCTCTATGGTCTTGGAACTTTTTATTTATTTGCTTTTTGTCTACTACGCTGTACTTGTGTCATTCTAATTGGGTAGGGATCTGAAAGAGAAAAAGAAGGAAATGTTGCTTGTATTCTACTAGTTGCATAGTTTTCTTAATTCTGGCATTCTTGTCTGTTATCAAGATGATAATCACACAACTTCATTGTTTGGTTTGCAGATATTATTTGGTGTGTGATTCAAACCAAACATGCTTTGTTTTATCTTTGTATGGTATGCGGAATGATACGGTAAGCGTAAGACAGTAAATATAGAATTTATGTTTTAACTTTATTGATAGTCGATGTTAAGATTGCTCATCCTTTAATGCAACAACCATGCCTTCTGCTGCTGTTTTTCATCAGTATTATGAAAAAATTTCTCCCCCAGGTTAAGGAAGGAGATCAGATTACACTACTGGAACCGTATTATCGCAACTTTGATTTTTCTTGGAAGGGAAAGGTATTTATCTCAAATATTTAAAATTTACATCTCTGTCTAAAACGAGCATTTTTTTTTTTTTTTGTTGAGTATAGTAATATTTGGGGCGGGAGAATTCGAATCTCTGACCTCTTGGTATGTTAATTATTGCTGAGCTATGCTCACTTTGACCTAAAACGAGCAAATTAACTCAAATGCTTCATTGTTGAGTTATCATATCAGTTGTTTTATAAAGTCTCATGACATGTTTAATAACATTCCACATTATTGCACCGAAAATAACATTTCATTTGGTCAACAAGAGCATAGCTCAATTGGCATAAAGCATGAACTTAGAACCAAGAGGTTAGGGGTTCGAGTTCTCCACCCCACATATTGTAAAAAAGAAAAAAAAAAAACATTTCATTTGTACATTTATTCACAAAATGACAGAAAAATGAGTATCTCATGAGTTTAGTTTGAATATGTTGAACCAGCATTACCGGTTCAAATCAATCCGCGTCGATTTCTTAGAACAAGTTCTTGTCAATGGAAAAGCTCCCTCTGCTCACCAGGCAGTCCGGACATCAATATATGCCCAACACAAACCCTGAAAAGCTGTTGCAAATGGAATTTTTTAAAGCTGCTGGGGTGTCTCTTCCATGTCCTGGATGGTCATCTGTGTGTTGGCTGTAAATAGATTTGGAATGTGAACGAATGGTGTGTGGAAATTTTGTACAATCATCAGCATCAAGAGGAATCAGAAGAAAACACTTGCATAGGAGTTTCAAGTTTGCAGTTTGTTGTTGAAGTTGCTGGGTGTTGTGCTTTGAATTGAATCTCTTTACTTTGTGATGTATTTAATATTGTTTTTTCTTCCCCCACATAGAACTTTCACTCCTAGAATTGTAAATTTTCCACCAAAATGGCTTTGTATAGAGTGCCAATCTTGCTGATGATCATTAACAGTTAATTTTATTGTAAGAAATAAGAACCTGATTCTTTTTAGGGGTTTTCTTATTTTTAACGTAAATTCTAGTATTCTGAAAGGCAAGTTTTCATAATCATATCATAATTGAAATCTTCTGTTATGCTTTAATTTCTTTAAAAGGAAAAAGAAATACTTGAAAAGAAAAAAGAATATATGTATTATTTTGGTCTTATATATTGGTTTTCATCCTATTGTTAGATTGGTTCTTAATCTGAAACTGTTATTATTATCATTATTTTAATTTATCATACTTTTATTCAGTTTTCCCAAATTCTAAGTAAATTATACCCAATGACGATTAAATTATAAGTCTAACTTGAACTTTCTGATTTTGTATTTGTGTTTAATAGGTCTTGAACTTTAAAAAGTGTCGAATATACTTTTACATTTTTTATTTTGTGCGTAATAGGTATCTAAACTTTAAAAGTGTTTATATCTAACTTTTAATTTTATATATAATAAGTCTCTAACACATCTGACATCCTTTAAAATTAACAAATTTATTAAATATAAATTTCAAGTTTGTGGCTAATAAAACTCTAAGCTTTCAATTATAAACTTTTTTTTTTGACAAAGGTGGAGGTGGGGTGATTCAAACTAGAGACCTCTCGATCATCAGTATAATGTTTATATCAGTTTAGTTATGCTCATGTTGGCTCAATTATAGACTTGTTAAACACTAAATTGAAAGTTTAAAGATCTATTAAATATGCAATGACTTATTAGACATAAAATTGAAAGTTCAAAAACCTATCAAAAGGTTTTTAATATTTAGAGACCCATTAAACACAGACCTAAGAGTTCACTAAACTTGTAATTTAATTTAATGTCTATATCAATATTTGTAGAATATAAAACACAAATATATATTCCCAACCCAATTTTGTAATTCTAAAACCCAAGTTAAAAAAAATTATAAAAATTACAGGAACTGATATAATAATTTTTAAACTTTAAGAACTAAATTAAAAATCTAGACAAACTTTAGAGATCAAAACTATATATATATAATAAATAATTATTACAATAAAATTTTATTCAAATTCAAATTTTGTTCTAAATCCCTCATTAAAAACAAAAACAAAAAAAAAAAAAAATGAAAAGGGGGCGGAGGAAAGGAAAAGGAAACAGAAGAGCACGTGGTTGACGGTGGCGGTAGAACGCGTATGGCATGAGCGTATCGTCTCTATAAAAAGCGCCTTCGCCGATTCGGACATTCACTAGAGCTTTCTGGAAAGGTGAACTCGAGTCGACACCAAGTCAAACGAAAGCCCTAACCACCGTCTTCTTCTTCTTCTTCTTCTTCTAGGGCTCCTCACCTTCTTCCTTCGATCTTCCTTTTTCTCTTGCAATCTTGTTTCCCCTCTCCTTCAGATTCAGGTACGGTTCCAATTCCTAATCACGTCTTTTGATCGTCAGGCCTAGCGATGGTTTTCTGTTCTTCTTCCGTTTTAGATAGATCTGAGTTTTATGTTTGGTTGATTTGTGTTGTTTGAATTGTTTACATGCTTGCGAGTAATCTTGTGTTGTGGATCTCCTGTTGATTTTTTTTATTTTTTATTTTTTTTTTTCTGGTTTAGAGCTCTTCTGAACAAAACCCCCTTTTGGCAAGGGTTCTGAGTTTCTTGATTTTATGGGTTTACGTGAATTTTGCTGCTTATATTCGTAACGTACGTGTTTTGTGTACCTTGTTTGGCGGAAATACGTTTTGTGGCGGATAGATTGAAGTTAATCAAAGCTAAGGTTGGAAATAATATAGAACAGTTTTCTTAATTTCATAATTATTGCCACAGAATTTCCCTTTTTCTGATGTTTGTATGGTGGTAAATTTTTGTTATGTGATGCTTCGTGTGTCAAATTGGTCTTGTTTCTACTTAGTATTTAGGCATATCTATGATTATAGTGCCTGCGAATTAAAAGTTGTTGAATGGCTTGGAATTTTAGGGCAGATTAGTTGAAGGCTCATTCTATTAGAACCAACTAGTTTTCATCTAGCTTTGCGTTACAGTTTTTGTAAGACGGAGGTGGATTTGTTTCTGAAGTGTTTCCAACTTCTAGAATTTATAGTTGATTAATAATCTTTGGATTTTTCTGTGCATGTGGTCATTTGTAGTGAGGAGGCCTGAAGTTGGCTGTGGGGAGCTGAACACTTATCCAGAAAGCTGAACTTATTGCTGCAGATAAGGTAAGAAAATGAACTACTTTTGGAAGAATTTATCTCCTAGCGAAATTTTTGTATTTCCACCCTCTCTAAAGTTGTTGCATCCTTGATCACGCTTGGATCTAAGTGATGCAGATGTATGCTTTTTTATATTCTATTGGTAGTGAGAAAACATGGATTTTTGTTGAATCTTAGTGTGGTTTTAAGAGTGCATATCTTCCTTTTTAAAATAGGAATATCCACAGGGTGCAAGCTCTTGTTTAATTGTCTTACTGAATTTTATAAAACATACAGTTTCTGGTTAAAACAGGCTGGGTAGCTGAATGGTCCGTCTCTATGTCAAGTTGCTTTGATTGTCACGAGCTTCATCTATGTCAATCATTTTCTGTCCTGCATGTTATGTGTGTTCTTATGTAGTATGAGAAAGTAGCATCCTATATATAATCTTTTGTTTTTGTGGAATTGGATTTAATTTCAATCTAGCTGGTGCTGCTATTGAAAGTGCGTGCATATTTTGATGGGAAGAACTAACATTGTTTTTTCTCTTTTGTGAGATGCACTTCCGGTCATCATCATACCAAAATGCAGGTATTGAGCTGGTTTTTATATCTAAATGGACACCAAGAAATTCATCCAATTGGTTGAGGAGAAGAAGAAGAGAGCTTTGGAGAAGAAGGAAGCCCCATTGAAATGGGAACAAAAACTTGAAGCTGCTGCCAAGGCAAAGGCTGATGCTGAAGCCAAAGCGAGGAAGCTCAAGGCTGCCAAGCATAAAAGAAGATCAGTATCAGATTCGGAGACTGATACAGGAAGTGATAGCCATGAGGGAGGACGGAAGGCCAGTAAGAGAACTCATAAGAAGCACAAGAAACATAGCCACTCTGATTCAGATGACAGTGAGAAAAGAAAGGATAGAAAATCCAAGAGAAAACTGAAACGACGTCGCTCATCTCATGATGACAGCAGTGATGAGTCTGATGCCCACTCTGAAGAAGACAGGAGGAAGAAGAGAAACCATAGAAGACATGCGCATGACTATTCAAGTTCTGATGAAAGTTACTCCAGTTCCAGTGATGATGTTGAGACAACAAAAAGAGGCCATTCCAGGCGTCATAGACATCATAGGCGAATTGACTATTCATCATCAGATGATTCTAGCAGTGAGGATGATACTAGTTTGCGAAGAAAAAGGCATGTAAGGAACCACAGGCCCCACCATCGACATGAGCGGTCCCATCGATCATGTAGTATTGATTCATTAGATAGTAATCACCGCAGGCATGATGCTAGAAGCCAGTCTTCAGGGAAGTCATCTGATGATAATCATGAAGAAACACTACAATCTAGGCACAAAAGATGCAACCACCATCATAAACATCGTCACCATCATCACTCAGGTGAAGAGAAGAAGCATTTATCCAATGGTTTGACCCAGATTGACGAAGAACATGTTGATCATGCTAAGGATTCTCATTAA

mRNA sequence

ATGAGTAGTCGATTCCTCTGCTGCCCTGCACAGAAAGCAGAAAGCAACCACATGCTACTCTGTACCGAGAATGAGGCAAAACTTGTAGAGGAAAGCATTCAACACGCAAAAGAAGCAGTTACTTTGGATGTGAAAGATGGAAACTCTTGGTATAATCTAGGAAATGCATGCCTTACAAGTTTTTTTGTTACTGGAGCGTGGGATCACAATAAGCTTCTGCAATCTCTGAAGGCATATCAAAATGCGGAAAAAGATGAAAAAATGATGTCAAATCCAGACTTGTATTTTAATTGTGCAACTGTTAACAAATATCTGGAGAATTATGAGAGGGCCCTAAGTGGATTTGAGGCTGCTGCTTTGAAGGATCCTAGTCTTAGTGCTACTAGAGAGGTCCAAAAGATGGTGAATCTTCTTGACAAATTGGAGAACATGTTGAAGGGTGAACACTCAGGATCGGATCCAAAGATTCTCCTCTTTCGTGTTGCGGCCACAATGGTGTGTCCTTTGGTTTTTGGGGTTGCTTCAGCTCGTAACATTGATTGCTCCTCTATATTTGAGGAAGTTCTTTGGCATCCCCCTTTTCATGGCAAAGGGAGAGTCCTTTGGCAAGCGTGCTTTTTTGCTACTTTGTGGGGCATTGATAGTTTAAGAGCCAAAAATGTTGCGTTGATCTCAAAATGGCCCCTAAAAGAGTTGTTCCCCTCCATTTTTAGGCTTTCTGCGGTTAAGGACAACAAAGTCAGTGAGCTATGGAATGATTCCACTTGGGATCTCAGTCTTAGAAGAGGCATTTTTGATAGGGAAATGAACGACTGGATGACTTTGTTGTCTCTCTTATCCCAATTCAACCTCAATGGTATCGCAGACTGTGTCGTTTGGAAGCTGGAGGGATCCGGAAAATTCTCTGTCAAATCCGCCCTTATGGCCCTGCAGAAGAAAAGAAGAGTTCTGGAAGAAGGCTTATGTGATCAGATATGGGATGGCCTTATTCCTAAGAGGGTGAAATTTTTCGTTTGGACTCTTTCTCACCATAGCATTAATACTATGGATAAGGTGCAGACCAGATTTCCTTGTCTTCAAGTCAGCCCCAATGTTTGTGTAATGTGTATGAAGAATGAAGAATCGGCCCCCCACCTGTTATTACATTGTGAATTCGCTGAGAAAGTGTGGAATTTTTTTTCTAGGATTTTCGGTATGAGCAGTTGCAAACCCAAGTGCGTGGTCAGTTGGTTGAGTGAAGCCCTAAATGGCTGGTGGTTAAAGGGCAAAGCCAAAGTCCTCTGGCGAAATCTCTCAAGGGCTATTCTTTGGCATCTGTGGAAGGAAAGAAATTCAAGAGTCTTCGCTGATAAGTATACGCCTTTCAATATTTTTTGTGGTGTTGTACAGCTTTCGGCCTCCAATTGGTGCGCCCAAGATAGTGTTTTCTCTAATTACTCTGCTGCCATGATGAACCTTCATTGGAAGGCTTTTTTATTTGTTTATTTCTTTCCGTCCAAAGCTTCCCATAAAGTAGCAAAAGTTGCGTCCTTAGTCCTCGACTCTGAAAGGCCCACCAAAATATTAAGCAAGAAGTCATTAATTGATTTGATGAGGAAGAGGCATGTAAAGTTGAAACCTGTTGCAAAATTTCATCCAGAATCTCCTAGAGCACATGCTAAAACCCGAAGAGTTGCATCTTTGGCATCATCGGTGGATATTGTTTGTTCGAATTCCTCATACAAGAGAGCCACTGTAGACCATCTGTCAGAGGGTCTGAACAAAACAGTTGCAGTAATTGGAAAGGTCCTGTTCTTCATTAAGCATGATAGTCTTGCCCCACTATATTATTTGGTGTGTGATTCAAACCAAACATGCTTTGTTTTATCTTTGTATGGTATGCGGAATGATACGGTTAAGGAAGGAGATCAGATTACACTACTGGAACCGTATTATCGCAACTTTGATTTTTCTTGGAAGGGAAAGATTTGGAATGTGAACGAATGGTGTGTGGAAATTTTGTACAATCATCAGCATCAAGAGGAATCAGAAGAAAACACTTGCATAGGAGTTTCAAGTTTGCAGTTTGTTGTTGAAGTTGCTGGGTGTTCGTATCGTCTCTATAAAAAGCGCCTTCGCCGATTCGGACATTCACTAGAGCTTTCTGGAAAGATTCAGAAAGCTGAACTTATTGCTGCAGATAAGAAATTCATCCAATTGGTTGAGGAGAAGAAGAAGAGAGCTTTGGAGAAGAAGGAAGCCCCATTGAAATGGGAACAAAAACTTGAAGCTGCTGCCAAGGCAAAGGCTGATGCTGAAGCCAAAGCGAGGAAGCTCAAGGCTGCCAAGCATAAAAGAAGATCAGTATCAGATTCGGAGACTGATACAGGAAGTGATAGCCATGAGGGAGGACGGAAGGCCAGTAAGAGAACTCATAAGAAGCACAAGAAACATAGCCACTCTGATTCAGATGACAGTGAGAAAAGAAAGGATAGAAAATCCAAGAGAAAACTGAAACGACGTCGCTCATCTCATGATGACAGCAGTGATGAGTCTGATGCCCACTCTGAAGAAGACAGGAGGAAGAAGAGAAACCATAGAAGACATGCGCATGACTATTCAAGTTCTGATGAAAGTTACTCCAGTTCCAGTGATGATGTTGAGACAACAAAAAGAGGCCATTCCAGGCGTCATAGACATCATAGGCGAATTGACTATTCATCATCAGATGATTCTAGCAGTGAGGATGATACTAGTTTGCGAAGAAAAAGGCATGTAAGGAACCACAGGCCCCACCATCGACATGAGCGGTCCCATCGATCATGTAGTATTGATTCATTAGATAGTAATCACCGCAGGCATGATGCTAGAAGCCAGTCTTCAGGGAAGTCATCTGATGATAATCATGAAGAAACACTACAATCTAGGCACAAAAGATGCAACCACCATCATAAACATCGTCACCATCATCACTCAGGTGAAGAGAAGAAGCATTTATCCAATGGTTTGACCCAGATTGACGAAGAACATGTTGATCATGCTAAGGATTCTCATTAA

Coding sequence (CDS)

ATGAGTAGTCGATTCCTCTGCTGCCCTGCACAGAAAGCAGAAAGCAACCACATGCTACTCTGTACCGAGAATGAGGCAAAACTTGTAGAGGAAAGCATTCAACACGCAAAAGAAGCAGTTACTTTGGATGTGAAAGATGGAAACTCTTGGTATAATCTAGGAAATGCATGCCTTACAAGTTTTTTTGTTACTGGAGCGTGGGATCACAATAAGCTTCTGCAATCTCTGAAGGCATATCAAAATGCGGAAAAAGATGAAAAAATGATGTCAAATCCAGACTTGTATTTTAATTGTGCAACTGTTAACAAATATCTGGAGAATTATGAGAGGGCCCTAAGTGGATTTGAGGCTGCTGCTTTGAAGGATCCTAGTCTTAGTGCTACTAGAGAGGTCCAAAAGATGGTGAATCTTCTTGACAAATTGGAGAACATGTTGAAGGGTGAACACTCAGGATCGGATCCAAAGATTCTCCTCTTTCGTGTTGCGGCCACAATGGTGTGTCCTTTGGTTTTTGGGGTTGCTTCAGCTCGTAACATTGATTGCTCCTCTATATTTGAGGAAGTTCTTTGGCATCCCCCTTTTCATGGCAAAGGGAGAGTCCTTTGGCAAGCGTGCTTTTTTGCTACTTTGTGGGGCATTGATAGTTTAAGAGCCAAAAATGTTGCGTTGATCTCAAAATGGCCCCTAAAAGAGTTGTTCCCCTCCATTTTTAGGCTTTCTGCGGTTAAGGACAACAAAGTCAGTGAGCTATGGAATGATTCCACTTGGGATCTCAGTCTTAGAAGAGGCATTTTTGATAGGGAAATGAACGACTGGATGACTTTGTTGTCTCTCTTATCCCAATTCAACCTCAATGGTATCGCAGACTGTGTCGTTTGGAAGCTGGAGGGATCCGGAAAATTCTCTGTCAAATCCGCCCTTATGGCCCTGCAGAAGAAAAGAAGAGTTCTGGAAGAAGGCTTATGTGATCAGATATGGGATGGCCTTATTCCTAAGAGGGTGAAATTTTTCGTTTGGACTCTTTCTCACCATAGCATTAATACTATGGATAAGGTGCAGACCAGATTTCCTTGTCTTCAAGTCAGCCCCAATGTTTGTGTAATGTGTATGAAGAATGAAGAATCGGCCCCCCACCTGTTATTACATTGTGAATTCGCTGAGAAAGTGTGGAATTTTTTTTCTAGGATTTTCGGTATGAGCAGTTGCAAACCCAAGTGCGTGGTCAGTTGGTTGAGTGAAGCCCTAAATGGCTGGTGGTTAAAGGGCAAAGCCAAAGTCCTCTGGCGAAATCTCTCAAGGGCTATTCTTTGGCATCTGTGGAAGGAAAGAAATTCAAGAGTCTTCGCTGATAAGTATACGCCTTTCAATATTTTTTGTGGTGTTGTACAGCTTTCGGCCTCCAATTGGTGCGCCCAAGATAGTGTTTTCTCTAATTACTCTGCTGCCATGATGAACCTTCATTGGAAGGCTTTTTTATTTGTTTATTTCTTTCCGTCCAAAGCTTCCCATAAAGTAGCAAAAGTTGCGTCCTTAGTCCTCGACTCTGAAAGGCCCACCAAAATATTAAGCAAGAAGTCATTAATTGATTTGATGAGGAAGAGGCATGTAAAGTTGAAACCTGTTGCAAAATTTCATCCAGAATCTCCTAGAGCACATGCTAAAACCCGAAGAGTTGCATCTTTGGCATCATCGGTGGATATTGTTTGTTCGAATTCCTCATACAAGAGAGCCACTGTAGACCATCTGTCAGAGGGTCTGAACAAAACAGTTGCAGTAATTGGAAAGGTCCTGTTCTTCATTAAGCATGATAGTCTTGCCCCACTATATTATTTGGTGTGTGATTCAAACCAAACATGCTTTGTTTTATCTTTGTATGGTATGCGGAATGATACGGTTAAGGAAGGAGATCAGATTACACTACTGGAACCGTATTATCGCAACTTTGATTTTTCTTGGAAGGGAAAGATTTGGAATGTGAACGAATGGTGTGTGGAAATTTTGTACAATCATCAGCATCAAGAGGAATCAGAAGAAAACACTTGCATAGGAGTTTCAAGTTTGCAGTTTGTTGTTGAAGTTGCTGGGTGTTCGTATCGTCTCTATAAAAAGCGCCTTCGCCGATTCGGACATTCACTAGAGCTTTCTGGAAAGATTCAGAAAGCTGAACTTATTGCTGCAGATAAGAAATTCATCCAATTGGTTGAGGAGAAGAAGAAGAGAGCTTTGGAGAAGAAGGAAGCCCCATTGAAATGGGAACAAAAACTTGAAGCTGCTGCCAAGGCAAAGGCTGATGCTGAAGCCAAAGCGAGGAAGCTCAAGGCTGCCAAGCATAAAAGAAGATCAGTATCAGATTCGGAGACTGATACAGGAAGTGATAGCCATGAGGGAGGACGGAAGGCCAGTAAGAGAACTCATAAGAAGCACAAGAAACATAGCCACTCTGATTCAGATGACAGTGAGAAAAGAAAGGATAGAAAATCCAAGAGAAAACTGAAACGACGTCGCTCATCTCATGATGACAGCAGTGATGAGTCTGATGCCCACTCTGAAGAAGACAGGAGGAAGAAGAGAAACCATAGAAGACATGCGCATGACTATTCAAGTTCTGATGAAAGTTACTCCAGTTCCAGTGATGATGTTGAGACAACAAAAAGAGGCCATTCCAGGCGTCATAGACATCATAGGCGAATTGACTATTCATCATCAGATGATTCTAGCAGTGAGGATGATACTAGTTTGCGAAGAAAAAGGCATGTAAGGAACCACAGGCCCCACCATCGACATGAGCGGTCCCATCGATCATGTAGTATTGATTCATTAGATAGTAATCACCGCAGGCATGATGCTAGAAGCCAGTCTTCAGGGAAGTCATCTGATGATAATCATGAAGAAACACTACAATCTAGGCACAAAAGATGCAACCACCATCATAAACATCGTCACCATCATCACTCAGGTGAAGAGAAGAAGCATTTATCCAATGGTTTGACCCAGATTGACGAAGAACATGTTGATCATGCTAAGGATTCTCATTAA

Protein sequence

MSSRFLCCPAQKAESNHMLLCTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHNKLLQSLKAYQNAEKDEKMMSNPDLYFNCATVNKYLENYERALSGFEAAALKDPSLSATREVQKMVNLLDKLENMLKGEHSGSDPKILLFRVAATMVCPLVFGVASARNIDCSSIFEEVLWHPPFHGKGRVLWQACFFATLWGIDSLRAKNVALISKWPLKELFPSIFRLSAVKDNKVSELWNDSTWDLSLRRGIFDREMNDWMTLLSLLSQFNLNGIADCVVWKLEGSGKFSVKSALMALQKKRRVLEEGLCDQIWDGLIPKRVKFFVWTLSHHSINTMDKVQTRFPCLQVSPNVCVMCMKNEESAPHLLLHCEFAEKVWNFFSRIFGMSSCKPKCVVSWLSEALNGWWLKGKAKVLWRNLSRAILWHLWKERNSRVFADKYTPFNIFCGVVQLSASNWCAQDSVFSNYSAAMMNLHWKAFLFVYFFPSKASHKVAKVASLVLDSERPTKILSKKSLIDLMRKRHVKLKPVAKFHPESPRAHAKTRRVASLASSVDIVCSNSSYKRATVDHLSEGLNKTVAVIGKVLFFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTVKEGDQITLLEPYYRNFDFSWKGKIWNVNEWCVEILYNHQHQEESEENTCIGVSSLQFVVEVAGCSYRLYKKRLRRFGHSLELSGKIQKAELIAADKKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKLKAAKHKRRSVSDSETDTGSDSHEGGRKASKRTHKKHKKHSHSDSDDSEKRKDRKSKRKLKRRRSSHDDSSDESDAHSEEDRRKKRNHRRHAHDYSSSDESYSSSSDDVETTKRGHSRRHRHHRRIDYSSSDDSSSEDDTSLRRKRHVRNHRPHHRHERSHRSCSIDSLDSNHRRHDARSQSSGKSSDDNHEETLQSRHKRCNHHHKHRHHHHSGEEKKHLSNGLTQIDEEHVDHAKDSH

Homology

[Close]

BLAST of Spg009936 vs. NCBI nr
Match: XP_038892014.1 (sarcoplasmic reticulum histidine-rich calcium-binding protein [Benincasa hispida] >XP_038892015.1 sarcoplasmic reticulum histidine-rich calcium-binding protein [Benincasa hispida])

HSP 1 Score: 362.8 bits (930), Expect = 9.3e-96
Identity = 230/296 (77.70%), Postives = 256/296 (86.49%), Query Frame = 0


Query: 728  KKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKLKAAKHKRRSVSDSET 787
            KKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARK+KA+KHKRRS+SDS+T
Sbjct: 4    KKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKIKASKHKRRSLSDSDT 63

Query: 788  DTGSDSHEGGRKASKRTHKKHKKHSHSDSDDSEKRKDRKSKRKLKRRRSSHDDSSDESDA 847
            D+ SDSHEGGRKA KR+HKKH+KHS+SDS DSEKRK+RKSK+KLKRRRSSHDDSSDESD 
Sbjct: 64   DSESDSHEGGRKAGKRSHKKHRKHSYSDSGDSEKRKERKSKQKLKRRRSSHDDSSDESDD 123

Query: 848  HSEEDRRKKRNHRRHAHDYSSSDESYSSSS-DDVETTKRGHSRRHRHHRRIDYSSSDDSS 907
            HS EDRRKKR+HRRHAHD SSSDESYSSSS DDVE TKR HSRRHRHHRRID SSSDDS+
Sbjct: 124  HSGEDRRKKRSHRRHAHDNSSSDESYSSSSDDDVERTKRSHSRRHRHHRRIDCSSSDDSN 183

Query: 908  SEDDTSLRRKRHVRNHRPHHRHERSHRSCSIDSLDSNHRRHDARSQSSGKSSDDNHEET- 967
            SED++SL+RK+ VR+H+ HHRH RSHRSCSIDSL+ N+ R DARSQSSGKSSDDNHEE+ 
Sbjct: 184  SEDNSSLQRKKRVRHHKSHHRHGRSHRSCSIDSLNRNYWRRDARSQSSGKSSDDNHEESA 243

Query: 968  -LQSRHKRCNHHHKHRHHHHSGEEKKHLSNGLTQIDEEHV---------DHAKDSH 1012
             LQSRHK  +HH+K+R HHHSG +      G TQIDE+H          D AKDSH
Sbjct: 244  LLQSRHK-SSHHNKYR-HHHSGVD------GSTQIDEKHADKNSDENDHDRAKDSH 291

[Close]

BLAST of Spg009936 vs. NCBI nr
Match: XP_022150512.1 (sarcoplasmic reticulum histidine-rich calcium-binding protein [Momordica charantia] >XP_022150513.1 sarcoplasmic reticulum histidine-rich calcium-binding protein [Momordica charantia] >XP_022150514.1 sarcoplasmic reticulum histidine-rich calcium-binding protein [Momordica charantia] >XP_022150515.1 sarcoplasmic reticulum histidine-rich calcium-binding protein [Momordica charantia])

HSP 1 Score: 350.5 bits (898), Expect = 4.8e-92
Identity = 216/283 (76.33%), Postives = 244/283 (86.22%), Query Frame = 0


Query: 728  KKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKLKAAKHKRRSVSDSET 787
            KKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKLKAAKHKRRSVSDS+T
Sbjct: 4    KKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKLKAAKHKRRSVSDSDT 63

Query: 788  DTGSDSHEGGRKASKRTHKKHKKHSHSDSDDSEKRKDRKSKRKLKRRRSSHDDSSDESDA 847
            DT SDSH+ GR+A KR+HKKH+KH HSDS DSEKRKDRKSKRK KRR SS DDS+DE D+
Sbjct: 64   DTESDSHD-GRRAGKRSHKKHRKHYHSDSSDSEKRKDRKSKRKSKRRHSSLDDSTDEFDS 123

Query: 848  HSEEDRRKKRNHRRHAHDYSSSDESYSSSSDDVETTKRGHSRRHRHHRRIDYSSSDDSSS 907
            HSEEDRRKKR+HRRHAHD SSSDE YSSSS D E+ KR HSRRHRHHRR DY+S D SS+
Sbjct: 124  HSEEDRRKKRHHRRHAHDGSSSDEDYSSSSGDDESMKRNHSRRHRHHRRTDYTSDDSSST 183

Query: 908  EDDTSLRRKRHVRNHRPHHRHERSHRSCSIDSLDSNHRRHDARSQSSGKSSDDNHEET-L 967
            ED+TSL+RKR +R+H+  HRHERSHRSCS+DSLD N+ RH         +S+DNH+E+ L
Sbjct: 184  EDNTSLQRKRRLRHHKHRHRHERSHRSCSVDSLDCNYGRH---------ASNDNHDESAL 243

Query: 968  QSRHKRCNHHHKHRHHHHSGEEKKHLSNGLTQIDEEHVDHAKD 1010
            QSRHKRCNHHHKHR HHH+GEEKKHLSNG +  +E+HV++  D
Sbjct: 244  QSRHKRCNHHHKHR-HHHTGEEKKHLSNGSS--NEKHVENEPD 273

[Close]

BLAST of Spg009936 vs. NCBI nr
Match: XP_022968658.1 (uncharacterized zinc finger CCHC domain-containing protein At4g19190-like [Cucurbita maxima] >XP_022968659.1 uncharacterized zinc finger CCHC domain-containing protein At4g19190-like [Cucurbita maxima])

HSP 1 Score: 330.5 bits (846), Expect = 5.1e-86
Identity = 209/287 (72.82%), Postives = 225/287 (78.40%), Query Frame = 0


Query: 728  KKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKLKAAKHKRRSVSDSET 787
            KKF QLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD                       
Sbjct: 4    KKFFQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD----------------------- 63

Query: 788  DTGSDSHEGGRKASKRTHKKHKKHSHSDSDDSEKRKDRKSKRKLKRRRSSHDDSSDESDA 847
                  HEGGR+A KR H+KH+KHSHSDS D EK KDRKSKRK KRRRSS+D SSDE   
Sbjct: 64   ------HEGGRRAGKRIHRKHRKHSHSDSGDYEKMKDRKSKRKPKRRRSSNDVSSDEIGG 123

Query: 848  HSEEDRRKKRNHRRHAHDYSSSDESYS-SSSDDVETTKRGHSRRHRHHRRIDYSSSDDSS 907
            HSEEDRRKKRNHRRH HD SSSDESYS SS+DD+ETTKR HSRRH+HHRR +YSSSDDSS
Sbjct: 124  HSEEDRRKKRNHRRHIHDDSSSDESYSGSSNDDIETTKRSHSRRHKHHRRPNYSSSDDSS 183

Query: 908  SEDDTSLRRKRHVRNHRPHHRHERSHRSCSIDSLDSNHRRHDARSQSSGKSSDDNHEE-- 967
            SEDDTSLRRKRHVR+HRPHHRH +SHRSCSIDSLD N+ RH+ARSQSSGKSSDDNHEE  
Sbjct: 184  SEDDTSLRRKRHVRHHRPHHRHGQSHRSCSIDSLDCNYGRHEARSQSSGKSSDDNHEEES 243

Query: 968  TLQSRHKRCNHHHKHRHHHHSGEEKKHLSNGLTQIDEEHVDHAKDSH 1012
             LQSRHKR NHHHKHRHHHHSG E KH  NG T+IDE++ D   D +
Sbjct: 244  ALQSRHKRENHHHKHRHHHHSG-ENKHSFNGSTKIDEKYNDDDPDGN 260

[Close]

BLAST of Spg009936 vs. NCBI nr
Match: XP_022945808.1 (uncharacterized zinc finger CCHC domain-containing protein At4g19190-like [Cucurbita moschata] >XP_022945809.1 uncharacterized zinc finger CCHC domain-containing protein At4g19190-like [Cucurbita moschata] >XP_022945810.1 uncharacterized zinc finger CCHC domain-containing protein At4g19190-like [Cucurbita moschata] >XP_022945811.1 uncharacterized zinc finger CCHC domain-containing protein At4g19190-like [Cucurbita moschata] >KAG6573924.1 hypothetical protein SDJN03_27811, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012988.1 hypothetical protein SDJN02_25742, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 329.3 bits (843), Expect = 1.1e-85
Identity = 209/287 (72.82%), Postives = 225/287 (78.40%), Query Frame = 0


Query: 728  KKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKLKAAKHKRRSVSDSET 787
            KKF QLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD                       
Sbjct: 4    KKFFQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD----------------------- 63

Query: 788  DTGSDSHEGGRKASKRTHKKHKKHSHSDSDDSEKRKDRKSKRKLKRRRSSHDDSSDESDA 847
                  HEGGR+A KR HKKH+KHSHSDS D EK KDRKSKRK KRRRSS+D SSDE   
Sbjct: 64   ------HEGGRRAGKRIHKKHRKHSHSDSGDYEKMKDRKSKRKPKRRRSSNDVSSDEFGD 123

Query: 848  HSEEDRRKKRNHRRHAHDYSSSDESYS-SSSDDVETTKRGHSRRHRHHRRIDYSSSDDSS 907
            HSEEDRRKKRNHRRH HD SSSDESYS SS+DD+ETTKR HSRRH+HHRR +YSSSDDSS
Sbjct: 124  HSEEDRRKKRNHRRHIHDDSSSDESYSGSSNDDIETTKRSHSRRHKHHRRPNYSSSDDSS 183

Query: 908  SEDDTSLRRKRHVRNHRPHHRHERSHRSCSIDSLDSNHRRHDARSQSSGKSSDDNHEE-- 967
            SEDDTSLRRKRHVR+HRPHHRH +SHRSCSIDSLD N+ RH+ARSQSSGKSSDDNHEE  
Sbjct: 184  SEDDTSLRRKRHVRHHRPHHRHGQSHRSCSIDSLDCNYGRHEARSQSSGKSSDDNHEEES 243

Query: 968  TLQSRHKRCNHHHKHRHHHHSGEEKKHLSNGLTQIDEEHVDHAKDSH 1012
             LQSRHKR NHHHKHRHHHHSG E KH  NG T+I+E++ D   D +
Sbjct: 244  ALQSRHKRENHHHKHRHHHHSG-ENKHSFNGSTEINEKYNDDDPDGN 260

[Close]

BLAST of Spg009936 vs. NCBI nr
Match: XP_023541098.1 (uncharacterized zinc finger CCHC domain-containing protein At4g19190-like [Cucurbita pepo subsp. pepo] >XP_023541099.1 uncharacterized zinc finger CCHC domain-containing protein At4g19190-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.4 bits (838), Expect = 4.3e-85
Identity = 208/287 (72.47%), Postives = 224/287 (78.05%), Query Frame = 0


Query: 728  KKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKLKAAKHKRRSVSDSET 787
            KKF QLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD                       
Sbjct: 4    KKFFQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD----------------------- 63

Query: 788  DTGSDSHEGGRKASKRTHKKHKKHSHSDSDDSEKRKDRKSKRKLKRRRSSHDDSSDESDA 847
                  HEGGR+A KR HKKH+KHSHSDS D EK KDRKSKRK KRRRSS+D SSDE   
Sbjct: 64   ------HEGGRRAGKRIHKKHRKHSHSDSGDYEKMKDRKSKRKPKRRRSSNDVSSDEFGG 123

Query: 848  HSEEDRRKKRNHRRHAHDYSSSDESYS-SSSDDVETTKRGHSRRHRHHRRIDYSSSDDSS 907
            HSEEDRRKKRNHRRH HD SSSDESYS SS++D+ETTKR HSRRH+HHRR +YSSSDDSS
Sbjct: 124  HSEEDRRKKRNHRRHIHDDSSSDESYSGSSNNDIETTKRSHSRRHKHHRRPNYSSSDDSS 183

Query: 908  SEDDTSLRRKRHVRNHRPHHRHERSHRSCSIDSLDSNHRRHDARSQSSGKSSDDNHEE-- 967
            SEDDTSLRRKRHVR+HRPHHRH +SHRSCSIDSLD N+ RH+ARSQSSGKSSDDNHEE  
Sbjct: 184  SEDDTSLRRKRHVRHHRPHHRHGQSHRSCSIDSLDCNYGRHEARSQSSGKSSDDNHEEES 243

Query: 968  TLQSRHKRCNHHHKHRHHHHSGEEKKHLSNGLTQIDEEHVDHAKDSH 1012
             LQSRHKR NHHHKHRHHHHS  E KH  NG T+IDE++ D   D +
Sbjct: 244  ALQSRHKRENHHHKHRHHHHS-SENKHSFNGSTEIDEKYNDDDPDGN 260

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BLAST of Spg009936 vs. ExPASy Swiss-Prot
Match: Q8N0Z6 (Tetratricopeptide repeat protein 5 OS=Homo sapiens OX=9606 GN=TTC5 PE=1 SV=2)

HSP 1 Score: 95.1 bits (235), Expect = 4.8e-18
Identity = 58/130 (44.62%), Postives = 83/130 (63.85%), Query Frame = 0


Query: 22  TENE-AKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHNKLLQSLKAYQ 81
           TE+E +  V +S++ AK AV +DV DG SWY LGN+ L+ +F TG  +     Q+L AY 
Sbjct: 153 TEDEHSHHVMDSVRQAKLAVQMDVHDGRSWYILGNSYLSLYFSTGQ-NPKISQQALSAYA 212

Query: 82  NAEK-DEKMMSNPDLYFNCATVNKYLENYERALSGFEAAALKDPSLSATRE-VQKMVNLL 141
            AEK D K  SNPDL+ N AT++KY E+Y  AL GF  AA  DP+    R+  Q+++  L
Sbjct: 213 QAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSRAAALDPAWPEPRQREQQLLEFL 272

Query: 142 DKLENMLKGE 149
           D+L ++L+ +
Sbjct: 273 DRLTSLLESK 281

[Close]

BLAST of Spg009936 vs. ExPASy Swiss-Prot
Match: Q5BK48 (Tetratricopeptide repeat protein 5 OS=Rattus norvegicus OX=10116 GN=Ttc5 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-17
Identity = 56/136 (41.18%), Postives = 81/136 (59.56%), Query Frame = 0


Query: 23  ENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHNKLLQSLKAYQNA 82
           +  ++ V +S++ AK AV +DV DG SWY LGNA L+ +F TG  +     Q+L AY  A
Sbjct: 155 DEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQ-NPKISQQALSAYAQA 214

Query: 83  EK-DEKMMSNPDLYFNCATVNKYLENYERALSGFEAAALKDPSLSATRE-VQKMVNLLDK 142
           EK D K  SNPDL+ N AT++KY E+Y  AL GF  AA  DP+    ++  Q+++  L +
Sbjct: 215 EKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAATLDPAWPEPQQREQQLLEFLSR 274

Query: 143 LENMLKGEHSGSDPKI 157
           L N+L  +      K+
Sbjct: 275 LTNLLASKGKTKPKKL 289

[Close]

BLAST of Spg009936 vs. ExPASy Swiss-Prot
Match: Q99LG4 (Tetratricopeptide repeat protein 5 OS=Mus musculus OX=10090 GN=Ttc5 PE=1 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 5.3e-17
Identity = 55/136 (40.44%), Postives = 81/136 (59.56%), Query Frame = 0


Query: 23  ENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHNKLLQSLKAYQNA 82
           +  ++ V +S++ AK AV +DV DG SWY LGNA L+ +F TG  +     Q+L AY  A
Sbjct: 155 DEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQ-NPKISQQALSAYAQA 214

Query: 83  EK-DEKMMSNPDLYFNCATVNKYLENYERALSGFEAAALKDPSLSATRE-VQKMVNLLDK 142
           EK D K  SNPDL+ N AT++KY E+Y  AL GF  AA  DP     ++  Q+++  L +
Sbjct: 215 EKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPVWPEPQQREQQLLEFLSR 274

Query: 143 LENMLKGEHSGSDPKI 157
           L ++L+ +      K+
Sbjct: 275 LTSLLESKGKTKPKKL 289

[Close]

BLAST of Spg009936 vs. ExPASy Swiss-Prot
Match: Q0P5H9 (Tetratricopeptide repeat protein 5 OS=Bos taurus OX=9913 GN=TTC5 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.6e-16
Identity = 53/128 (41.41%), Postives = 78/128 (60.94%), Query Frame = 0


Query: 23  ENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHNKLLQSLKAYQNA 82
           +  ++ V +S++ AK AV +D+ DG SWY LGNA L+ +F TG  +     Q+L AY  A
Sbjct: 155 DEHSRHVMDSVRQAKLAVQMDILDGRSWYILGNAYLSLYFNTGQ-NPKISQQALSAYAQA 214

Query: 83  EK-DEKMMSNPDLYFNCATVNKYLENYERALSGFEAAALKDPSL-SATREVQKMVNLLDK 142
           EK D    SNPDL+ N AT++KY ENY  AL GF  AA  DP+     +  Q++++ L +
Sbjct: 215 EKVDRTASSNPDLHLNRATLHKYEENYGEALEGFSRAAALDPAWPEPWQREQQLLDFLTR 274

Query: 143 LENMLKGE 149
           L + L+ +
Sbjct: 275 LTSFLESK 281

[Close]

BLAST of Spg009936 vs. ExPASy TrEMBL
Match: A0A6J1DAA2 (sarcoplasmic reticulum histidine-rich calcium-binding protein OS=Momordica charantia OX=3673 GN=LOC111018646 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 2.3e-92
Identity = 216/283 (76.33%), Postives = 244/283 (86.22%), Query Frame = 0


Query: 728  KKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKLKAAKHKRRSVSDSET 787
            KKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKLKAAKHKRRSVSDS+T
Sbjct: 4    KKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKLKAAKHKRRSVSDSDT 63

Query: 788  DTGSDSHEGGRKASKRTHKKHKKHSHSDSDDSEKRKDRKSKRKLKRRRSSHDDSSDESDA 847
            DT SDSH+ GR+A KR+HKKH+KH HSDS DSEKRKDRKSKRK KRR SS DDS+DE D+
Sbjct: 64   DTESDSHD-GRRAGKRSHKKHRKHYHSDSSDSEKRKDRKSKRKSKRRHSSLDDSTDEFDS 123

Query: 848  HSEEDRRKKRNHRRHAHDYSSSDESYSSSSDDVETTKRGHSRRHRHHRRIDYSSSDDSSS 907
            HSEEDRRKKR+HRRHAHD SSSDE YSSSS D E+ KR HSRRHRHHRR DY+S D SS+
Sbjct: 124  HSEEDRRKKRHHRRHAHDGSSSDEDYSSSSGDDESMKRNHSRRHRHHRRTDYTSDDSSST 183

Query: 908  EDDTSLRRKRHVRNHRPHHRHERSHRSCSIDSLDSNHRRHDARSQSSGKSSDDNHEET-L 967
            ED+TSL+RKR +R+H+  HRHERSHRSCS+DSLD N+ RH         +S+DNH+E+ L
Sbjct: 184  EDNTSLQRKRRLRHHKHRHRHERSHRSCSVDSLDCNYGRH---------ASNDNHDESAL 243

Query: 968  QSRHKRCNHHHKHRHHHHSGEEKKHLSNGLTQIDEEHVDHAKD 1010
            QSRHKRCNHHHKHR HHH+GEEKKHLSNG +  +E+HV++  D
Sbjct: 244  QSRHKRCNHHHKHR-HHHTGEEKKHLSNGSS--NEKHVENEPD 273

[Close]

BLAST of Spg009936 vs. ExPASy TrEMBL
Match: A0A6J1HYP5 (uncharacterized zinc finger CCHC domain-containing protein At4g19190-like OS=Cucurbita maxima OX=3661 GN=LOC111467816 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.5e-86
Identity = 209/287 (72.82%), Postives = 225/287 (78.40%), Query Frame = 0


Query: 728  KKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKLKAAKHKRRSVSDSET 787
            KKF QLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD                       
Sbjct: 4    KKFFQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD----------------------- 63

Query: 788  DTGSDSHEGGRKASKRTHKKHKKHSHSDSDDSEKRKDRKSKRKLKRRRSSHDDSSDESDA 847
                  HEGGR+A KR H+KH+KHSHSDS D EK KDRKSKRK KRRRSS+D SSDE   
Sbjct: 64   ------HEGGRRAGKRIHRKHRKHSHSDSGDYEKMKDRKSKRKPKRRRSSNDVSSDEIGG 123

Query: 848  HSEEDRRKKRNHRRHAHDYSSSDESYS-SSSDDVETTKRGHSRRHRHHRRIDYSSSDDSS 907
            HSEEDRRKKRNHRRH HD SSSDESYS SS+DD+ETTKR HSRRH+HHRR +YSSSDDSS
Sbjct: 124  HSEEDRRKKRNHRRHIHDDSSSDESYSGSSNDDIETTKRSHSRRHKHHRRPNYSSSDDSS 183

Query: 908  SEDDTSLRRKRHVRNHRPHHRHERSHRSCSIDSLDSNHRRHDARSQSSGKSSDDNHEE-- 967
            SEDDTSLRRKRHVR+HRPHHRH +SHRSCSIDSLD N+ RH+ARSQSSGKSSDDNHEE  
Sbjct: 184  SEDDTSLRRKRHVRHHRPHHRHGQSHRSCSIDSLDCNYGRHEARSQSSGKSSDDNHEEES 243

Query: 968  TLQSRHKRCNHHHKHRHHHHSGEEKKHLSNGLTQIDEEHVDHAKDSH 1012
             LQSRHKR NHHHKHRHHHHSG E KH  NG T+IDE++ D   D +
Sbjct: 244  ALQSRHKRENHHHKHRHHHHSG-ENKHSFNGSTKIDEKYNDDDPDGN 260

[Close]

BLAST of Spg009936 vs. ExPASy TrEMBL
Match: A0A6J1G216 (uncharacterized zinc finger CCHC domain-containing protein At4g19190-like OS=Cucurbita moschata OX=3662 GN=LOC111449946 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 5.5e-86
Identity = 209/287 (72.82%), Postives = 225/287 (78.40%), Query Frame = 0


Query: 728  KKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKLKAAKHKRRSVSDSET 787
            KKF QLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD                       
Sbjct: 4    KKFFQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKAD----------------------- 63

Query: 788  DTGSDSHEGGRKASKRTHKKHKKHSHSDSDDSEKRKDRKSKRKLKRRRSSHDDSSDESDA 847
                  HEGGR+A KR HKKH+KHSHSDS D EK KDRKSKRK KRRRSS+D SSDE   
Sbjct: 64   ------HEGGRRAGKRIHKKHRKHSHSDSGDYEKMKDRKSKRKPKRRRSSNDVSSDEFGD 123

Query: 848  HSEEDRRKKRNHRRHAHDYSSSDESYS-SSSDDVETTKRGHSRRHRHHRRIDYSSSDDSS 907
            HSEEDRRKKRNHRRH HD SSSDESYS SS+DD+ETTKR HSRRH+HHRR +YSSSDDSS
Sbjct: 124  HSEEDRRKKRNHRRHIHDDSSSDESYSGSSNDDIETTKRSHSRRHKHHRRPNYSSSDDSS 183

Query: 908  SEDDTSLRRKRHVRNHRPHHRHERSHRSCSIDSLDSNHRRHDARSQSSGKSSDDNHEE-- 967
            SEDDTSLRRKRHVR+HRPHHRH +SHRSCSIDSLD N+ RH+ARSQSSGKSSDDNHEE  
Sbjct: 184  SEDDTSLRRKRHVRHHRPHHRHGQSHRSCSIDSLDCNYGRHEARSQSSGKSSDDNHEEES 243

Query: 968  TLQSRHKRCNHHHKHRHHHHSGEEKKHLSNGLTQIDEEHVDHAKDSH 1012
             LQSRHKR NHHHKHRHHHHSG E KH  NG T+I+E++ D   D +
Sbjct: 244  ALQSRHKRENHHHKHRHHHHSG-ENKHSFNGSTEINEKYNDDDPDGN 260

[Close]

BLAST of Spg009936 vs. ExPASy TrEMBL
Match: A0A6J1GZG1 (CAX-interacting protein 4 OS=Cucurbita moschata OX=3662 GN=LOC111458543 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.0e-80
Identity = 214/295 (72.54%), Postives = 237/295 (80.34%), Query Frame = 0


Query: 728  KKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKLKAAKHKRRSVSDSET 787
            KKFIQLVEEKK+RALEKKEAPLKWEQ+LEAAAKA+A AEAKARKLKAAKHKRRSVSDS+T
Sbjct: 4    KKFIQLVEEKKRRALEKKEAPLKWEQRLEAAAKAEA-AEAKARKLKAAKHKRRSVSDSDT 63

Query: 788  DTGSDSHEGGRKASKRTHKKHKKHSHSDSDDSEKRKDRKSKRKLKRRRSSHDDSSDESDA 847
            DT SDSHE GRKA KRTHKKH++HSHSDS DSEKRKDR+SKRKLKR +SSHDDSSDE D 
Sbjct: 64   DTESDSHERGRKAGKRTHKKHRRHSHSDSGDSEKRKDRRSKRKLKRHQSSHDDSSDEFDG 123

Query: 848  HSEEDRRKKRNHRRHAHDYSSSDESYSSSS-DDVETTKRGHSRRHRHHRRIDYSSSDDSS 907
            HS+E RRKKRNHRRHAHD SSSDESYSSSS DDVET KR  SR +RHHR I YSSSDDSS
Sbjct: 124  HSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRHNRHHRHIGYSSSDDSS 183

Query: 908  SEDDTSLRRKRHVRNHRPHHRHERSHRSCSIDSLDSNHRRHDARSQSSGKSSD-DNHEET 967
            SE++   RR++  R    H +HE+SHRSCSIDSLD NH R DARSQ+SG+ SD D  +  
Sbjct: 184  SENNN--RREKRGR----HRQHEQSHRSCSIDSLDCNHWRCDARSQASGRLSDADREDSA 243

Query: 968  LQSRHKRCNHHHKHRHHHHSGEEKKHLSNGLTQIDEEHVDH---------AKDSH 1012
            LQ RHK  +H +KHR HHHSG      + GLTQIDEEH D+         AKDSH
Sbjct: 244  LQYRHK-SSHPNKHR-HHHSG------AGGLTQIDEEHADNNSDGNNHGRAKDSH 283

[Close]

BLAST of Spg009936 vs. ExPASy TrEMBL
Match: A0A6J1J292 (sarcoplasmic reticulum histidine-rich calcium-binding protein OS=Cucurbita maxima OX=3661 GN=LOC111482679 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.3e-79
Identity = 208/286 (72.73%), Postives = 239/286 (83.57%), Query Frame = 0


Query: 728  KKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKLKAAKHKRRSVSDSET 787
            KKFIQLVEEKKKRALEKKEAPLKWEQ+LEAA+KA+A AEAKARKLKAAKHKRRSVS+S+T
Sbjct: 4    KKFIQLVEEKKKRALEKKEAPLKWEQRLEAASKAEA-AEAKARKLKAAKHKRRSVSNSDT 63

Query: 788  DTGSDSHEGGRKASKRTHKKHKKHSHSDSDDSEKRKDRKSKRKLKRRRSSHDDSSDESDA 847
            D+ SDSHE GRKA KRTHKKH++HSHSDS DS K+K+ +SK+KLKRRRSSHDDSSDE D 
Sbjct: 64   DSESDSHERGRKAGKRTHKKHRRHSHSDSGDS-KKKEGRSKKKLKRRRSSHDDSSDEFDG 123

Query: 848  HSEEDRRKKRNHRRHAHDYSSSDESYSSSS-DDVETTKRGHSRRHRHHRRIDYSSSDDSS 907
            HS+E RRKKRNHRRHAHD SSSDESYSSSS DDVET KR  SRRHRHHR+I YSSSDDSS
Sbjct: 124  HSDEGRRKKRNHRRHAHDNSSSDESYSSSSDDDVETRKRCRSRRHRHHRQIGYSSSDDSS 183

Query: 908  SEDDTSLRRKRHVRNHRPHHRHERSHRSCSIDSLDSNHRRHDARSQSSGKSSDDNHEET- 967
             E++   RR++ VR    H +HERSHRSCSIDSLD N+ R DARSQ+SG+ SD +HE++ 
Sbjct: 184  RENNN--RREKRVR----HRQHERSHRSCSIDSLDCNYWRWDARSQASGRLSDADHEDSA 243

Query: 968  LQSRHKRCNHHHKHRHHHHSGEEKKHLSNGLTQIDEEHVDHAKDSH 1012
            LQ RHK  +HH+KHR HHHSG      ++ LTQIDEEH D+  D +
Sbjct: 244  LQYRHK-SSHHNKHR-HHHSG------ASSLTQIDEEHADNVSDGN 273

[Close]

BLAST of Spg009936 vs. TAIR 10
Match: AT2G01100.1 (unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archae - 0; Bacteria - 1003; Metazoa - 10257; Fungi - 1826; Plants - 1570; Viruses - 56; Other Eukaryotes - 4708 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 1.6e-24
Identity = 108/253 (42.69%), Postives = 152/253 (60.08%), Query Frame = 0


Query: 728 KKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKLKAAKHKRRSVSDSET 787
           KKFIQ+VEEKK+R LEK+EAPLKWEQKLEAAA AKAD E K ++ K  K K+R+ S+S +
Sbjct: 4   KKFIQMVEEKKRRVLEKQEAPLKWEQKLEAAANAKADTETKVKRSKGPKRKQRAASESSS 63

Query: 788 DTGSDSHEGGRKASKRTHKKHKKHSHSDSDDSEKRKDRKSKRKLKRRRSSHDDSSDESDA 847
           +  SDS    R+ S+R+H KH++H+HSDSDDS++RK++KS+R+ +R  S  DDS+ + ++
Sbjct: 64  E--SDSSSEVRRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLSPSDDSTGDYES 123

Query: 848 HSEEDRRKKRNHRRHAHDYSSSDESYSSSSDDVETTKRGHSRRH-RHHRRIDYSSSDDSS 907
            SE++ R K  H R    +SS       S++DV        R+H +HHRR +  +S DS 
Sbjct: 124 GSEDELRMKIKHHRRHKWHSSRKTCDDDSTEDVR-------RKHLKHHRRSEVVTSSDSE 183

Query: 908 SEDDTSLRRKRHVRNHRPHHRHERSHRSCSIDSLDSNHRRHDARSQSSGKSSDDNHEETL 967
            E      R+R  + HR H+R   S      DS  S  RR   R + +  SS+++     
Sbjct: 184 EESG----RRRRGKYHR-HNRGSASSSGSEEDSGKSMKRRQHKRHRLAESSSEEDGA--- 235

Query: 968 QSRHKRCNHHHKH 980
                R   HHKH
Sbjct: 244 ----MRRTRHHKH 235

[Close]

BLAST of Spg009936 vs. TAIR 10
Match: AT2G01100.2 (unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archae - 0; Bacteria - 1003; Metazoa - 10257; Fungi - 1826; Plants - 1570; Viruses - 56; Other Eukaryotes - 4708 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 1.6e-24
Identity = 108/253 (42.69%), Postives = 152/253 (60.08%), Query Frame = 0


Query: 728 KKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKLKAAKHKRRSVSDSET 787
           KKFIQ+VEEKK+R LEK+EAPLKWEQKLEAAA AKAD E K ++ K  K K+R+ S+S +
Sbjct: 4   KKFIQMVEEKKRRVLEKQEAPLKWEQKLEAAANAKADTETKVKRSKGPKRKQRAASESSS 63

Query: 788 DTGSDSHEGGRKASKRTHKKHKKHSHSDSDDSEKRKDRKSKRKLKRRRSSHDDSSDESDA 847
           +  SDS    R+ S+R+H KH++H+HSDSDDS++RK++KS+R+ +R  S  DDS+ + ++
Sbjct: 64  E--SDSSSEVRRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLSPSDDSTGDYES 123

Query: 848 HSEEDRRKKRNHRRHAHDYSSSDESYSSSSDDVETTKRGHSRRH-RHHRRIDYSSSDDSS 907
            SE++ R K  H R    +SS       S++DV        R+H +HHRR +  +S DS 
Sbjct: 124 GSEDELRMKIKHHRRHKWHSSRKTCDDDSTEDVR-------RKHLKHHRRSEVVTSSDSE 183

Query: 908 SEDDTSLRRKRHVRNHRPHHRHERSHRSCSIDSLDSNHRRHDARSQSSGKSSDDNHEETL 967
            E      R+R  + HR H+R   S      DS  S  RR   R + +  SS+++     
Sbjct: 184 EESG----RRRRGKYHR-HNRGSASSSGSEEDSGKSMKRRQHKRHRLAESSSEEDGA--- 235

Query: 968 QSRHKRCNHHHKH 980
                R   HHKH
Sbjct: 244 ----MRRTRHHKH 235

[Close]

BLAST of Spg009936 vs. TAIR 10
Match: AT2G01100.3 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 1.6e-24
Identity = 108/253 (42.69%), Postives = 152/253 (60.08%), Query Frame = 0


Query: 728 KKFIQLVEEKKKRALEKKEAPLKWEQKLEAAAKAKADAEAKARKLKAAKHKRRSVSDSET 787
           KKFIQ+VEEKK+R LEK+EAPLKWEQKLEAAA AKAD E K ++ K  K K+R+ S+S +
Sbjct: 4   KKFIQMVEEKKRRVLEKQEAPLKWEQKLEAAANAKADTETKVKRSKGPKRKQRAASESSS 63

Query: 788 DTGSDSHEGGRKASKRTHKKHKKHSHSDSDDSEKRKDRKSKRKLKRRRSSHDDSSDESDA 847
           +  SDS    R+ S+R+H KH++H+HSDSDDS++RK++KS+R+ +R  S  DDS+ + ++
Sbjct: 64  E--SDSSSEVRRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLSPSDDSTGDYES 123

Query: 848 HSEEDRRKKRNHRRHAHDYSSSDESYSSSSDDVETTKRGHSRRH-RHHRRIDYSSSDDSS 907
            SE++ R K  H R    +SS       S++DV        R+H +HHRR +  +S DS 
Sbjct: 124 GSEDELRMKIKHHRRHKWHSSRKTCDDDSTEDVR-------RKHLKHHRRSEVVTSSDSE 183

Query: 908 SEDDTSLRRKRHVRNHRPHHRHERSHRSCSIDSLDSNHRRHDARSQSSGKSSDDNHEETL 967
            E      R+R  + HR H+R   S      DS  S  RR   R + +  SS+++     
Sbjct: 184 EESG----RRRRGKYHR-HNRGSASSSGSEEDSGKSMKRRQHKRHRLAESSSEEDGA--- 235

Query: 968 QSRHKRCNHHHKH 980
                R   HHKH
Sbjct: 244 ----MRRTRHHKH 235

The following BLAST results are available for this feature:

BLAST of Spg009936 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038892014.1	9.3e-96	77.70	sarcoplasmic reticulum histidine-rich calcium-binding protein [Benincasa hispida...	[more]
XP_022150512.1	4.8e-92	76.33	sarcoplasmic reticulum histidine-rich calcium-binding protein [Momordica charant...	[more]
XP_022968658.1	5.1e-86	72.82	uncharacterized zinc finger CCHC domain-containing protein At4g19190-like [Cucur...	[more]
XP_022945808.1	1.1e-85	72.82	uncharacterized zinc finger CCHC domain-containing protein At4g19190-like [Cucur...	[more]
XP_023541098.1	4.3e-85	72.47	uncharacterized zinc finger CCHC domain-containing protein At4g19190-like [Cucur...	[more]

BLAST of Spg009936 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8N0Z6	4.8e-18	44.62	Tetratricopeptide repeat protein 5 OS=Homo sapiens OX=9606 GN=TTC5 PE=1 SV=2	[more]
Q5BK48	1.1e-17	41.18	Tetratricopeptide repeat protein 5 OS=Rattus norvegicus OX=10116 GN=Ttc5 PE=2 SV...	[more]
Q99LG4	5.3e-17	40.44	Tetratricopeptide repeat protein 5 OS=Mus musculus OX=10090 GN=Ttc5 PE=1 SV=2	[more]
Q0P5H9	2.6e-16	41.41	Tetratricopeptide repeat protein 5 OS=Bos taurus OX=9913 GN=TTC5 PE=2 SV=1	[more]

BLAST of Spg009936 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAA2	2.3e-92	76.33	sarcoplasmic reticulum histidine-rich calcium-binding protein OS=Momordica chara...	[more]
A0A6J1HYP5	2.5e-86	72.82	uncharacterized zinc finger CCHC domain-containing protein At4g19190-like OS=Cuc...	[more]
A0A6J1G216	5.5e-86	72.82	uncharacterized zinc finger CCHC domain-containing protein At4g19190-like OS=Cuc...	[more]
A0A6J1GZG1	2.0e-80	72.54	CAX-interacting protein 4 OS=Cucurbita moschata OX=3662 GN=LOC111458543 PE=4 SV=...	[more]
A0A6J1J292	1.3e-79	72.73	sarcoplasmic reticulum histidine-rich calcium-binding protein OS=Cucurbita maxim...	[more]

BLAST of Spg009936 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01100.1	1.6e-24	42.69	unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archae -...	[more]
AT2G01100.2	1.6e-24	42.69	unknown protein; Has 19420 Blast hits to 10641 proteins in 779 species: Archae -...	[more]
AT2G01100.3	1.6e-24	42.69	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 755..778
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 971..987
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 836..853
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 931..970
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 897..915
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 988..1011
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 916..930
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 779..799
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 767..1011
None	No IPR available	PANTHER	PTHR37715	OS01G0120700 PROTEIN	coord: 728..994
None	No IPR available	PANTHER	PTHR37715:SF1	OS01G0120700 PROTEIN	coord: 728..994
IPR038645	TTC5, OB fold domain superfamily	GENE3D	2.40.50.550		coord: 553..690 e-value: 1.1E-26 score: 95.1
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 301..390 e-value: 1.0E-14 score: 55.0
IPR032076	Tetratricopeptide repeat protein 5, OB fold domain	PFAM	PF16669	TTC5_OB	coord: 574..659 e-value: 8.0E-26 score: 90.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 7..148 e-value: 1.1E-42 score: 148.2
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 27..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg009936.1	Spg009936.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding