Spg009882 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGATAATTCACGATGTCCGAACGAAGTCTTCCAACTGAAATGGCGCGAAATTAGTGGCACACCTTCATGGACCATACGCCACTTTCTCTCTCTTCTCTCTCTTCTCTCTCTCTCCTCTCTTCAGCGTTCCAATTCTCAAATGTCTGTTGGACAAACCGCATCCGTAGCGAACTTCGCAACTTCCCAAACCCCCAAAAGAGAAAAATAAAAGGCAACATTCATTCAAATCCCCCGTTTCTATGATAGATTCTTCACACAAGAAAAAAAGGGAAGTTGAAATTCTTTGCAAATTTCCAACTGGGTTCCCATTACTCTCTTCTTTCAGTCTCGATCACTCTGAAATTTCCTACGACTCGGTGAAAACTATGTATAATGGTGGTGGGTGTGGCGGTGGATTTTGAGGGCTCTTAAAAAATGGACATTGGTGCGACCCCTCTTACCGTCATAGCCGAGTCCTTCGAAGGGCTTGCCAAATTACTAGTTTCTTTGAATGATTCCTCTCAAGAACTCCGATTGGATGTGCTCTGTGACGCTTGTTCTCTCGTCTCTGTGCTTTTCAATTCTCTCGGCCTTGCCTTCAAATTCGCCGAGTTAGAGTACGTCTCCAAGGTTATATTCCCCTTTTCTTCTTCTTCCATTTCGTTTCTTGATATGAAAGATCTTGGGAATCCGATTCAAATGAGATGACCCCTTTTGATTGTTTGTTCTTTCAGGTGCGTGATCTTCTTGAAGCTTCCAAGAAGCATGCGACATTGCACACAATACTTGACGATGATATTGCAAATGACACAGTTAAAACGCCCGGAAGCCATTCGCGCAATCTGCGTCGAGTTAGACAAGGTTTGGACCTTGTTAGAGCTCTCTTTGAACAGTTCATGTCTACTGAGTAAGTTCTCTCCCCTTTTTCTCTTGCTCATTGCAGTCAAGATAGAAGTTATTGATTGATGATGGATCTAATCTTATGGTTCTTAAAGGGATTTTTCTTCTTGTTTTGATGCCCTGCATTTCATTTGCTGGTTGGGTTGTGTTCATTTTGAATCTGCTGTGCCTTGATTTTTTTGTTTTTGGATGGTGTAATGTCTGGACGACGAATGATCATTTCCTTTGTTTTCTAAGGTTCTCTGAAGTTTATCGTTGTATGTTTCCTCTCCAAATGAGCGACCATTTGATGAATTTTCTCACCCTTTTCCTAGAAAATTGCTTTTGTATTTCCATTTTGATTCTTGGGTCATCTTTGGCCTCTACTCCAACTACTTTTCTCTGTCTGCTGAATAAATTTTTGGGTTTCGTGTCATTCTAAACATAGTTCAAATGGTTAGACATTAGTTTTCTTTGAATCGTATGATCAAGTTCCCTCTCCGTGACAATTTAACATGGTTTGATTCAATTCAAACCCCATGTATCATTCTTCCTCTAATTAATTATAACCCGCTAGTTAGATTCCCACAACTTATTTAAAAGTTGACATTGGTAAATAATGCAAAAGCTGAAACTTCTTTAAAAATTGGTTAAGGGGTCAACTTACTTGGCTTCTGACTTGTGTCTTTAGTGATTTCTCGTTAAGAGAAGCTGCCTCAGCAGCTTATACACAAGTTTGTGCACCCTACCACACCTGGACAGTCAGAACAGCAGTTTCTGCAGGAATGTATACTCTTCCAACGAGGGAACAGCTTCTGCTAAAGCTCAACGAGACCAGTAAGCTCATTTCATTTACTCTTCCCAATTATATAGCTAAATATGTTGTGTGCACAAGTAAATTTACAACCCCTCTTTTCACCCTTGCAGATCAGTCAGCAGAGAAGAAAATGAAAAGGTATATCGATGCTTCGGGTCCGGTTATAGAATATATTGACAAGCTTTACATTTCTAGGAATATCAGCTTGGACTGGTGACTTTCACCTCCTTCTATAGACAACAGATTCTTCGTTAATCTTGTCTAAGCAGCAGCTCATCTCACCAGAGTAACACAAAAAGAAGCCTTCCACTGATGGTTCAAACAGATTACATTATAAGTTGAAGAGTTTCATGACAATTTCTTTGTGATGCACATTTTGTTTAGTGTTATTATCTGTGTATATATTTGAATTCATAACATGTCAGATCGAGTATCTGACAAATCATGGTACTTTTAGGTCACGGTATCTTTCAGTTTGAGTATTAAGTAAAAGGGAAACGTAGTG ATGGACATTGGTGCGACCCCTCTTACCGTCATAGCCGAGTCCTTCGAAGGGCTTGCCAAATTACTAGTTTCTTTGAATGATTCCTCTCAAGAACTCCGATTGGATGTGCTCTGTGACGCTTGTTCTCTCGTCTCTGTGCTTTTCAATTCTCTCGGCCTTGCCTTCAAATTCGCCGAGTTAGAGTACGTCTCCAAGGTGCGTGATCTTCTTGAAGCTTCCAAGAAGCATGCGACATTGCACACAATACTTGACGATGATATTGCAAATGACACAGTTAAAACGCCCGGAAGCCATTCGCGCAATCTGCGTCGAGTTAGACAAGGTTTGGACCTTGTTAGAGCTCTCTTTGAACAGTTCATGTCTACTGATGATTTCTCGTTAAGAGAAGCTGCCTCAGCAGCTTATACACAAGTTTGTGCACCCTACCACACCTGGACAGTCAGAACAGCAGTTTCTGCAGGAATGTATACTCTTCCAACGAGGGAACAGCTTCTGCTAAAGCTCAACGAGACCAATCAGTCAGCAGAGAAGAAAATGAAAAGGTATATCGATGCTTCGGGTCCGGTTATAGAATATATTGACAAGCTTTACATTTCTAGGAATATCAGCTTGGACTGGTGA ATGGACATTGGTGCGACCCCTCTTACCGTCATAGCCGAGTCCTTCGAAGGGCTTGCCAAATTACTAGTTTCTTTGAATGATTCCTCTCAAGAACTCCGATTGGATGTGCTCTGTGACGCTTGTTCTCTCGTCTCTGTGCTTTTCAATTCTCTCGGCCTTGCCTTCAAATTCGCCGAGTTAGAGTACGTCTCCAAGGTGCGTGATCTTCTTGAAGCTTCCAAGAAGCATGCGACATTGCACACAATACTTGACGATGATATTGCAAATGACACAGTTAAAACGCCCGGAAGCCATTCGCGCAATCTGCGTCGAGTTAGACAAGGTTTGGACCTTGTTAGAGCTCTCTTTGAACAGTTCATGTCTACTGATGATTTCTCGTTAAGAGAAGCTGCCTCAGCAGCTTATACACAAGTTTGTGCACCCTACCACACCTGGACAGTCAGAACAGCAGTTTCTGCAGGAATGTATACTCTTCCAACGAGGGAACAGCTTCTGCTAAAGCTCAACGAGACCAATCAGTCAGCAGAGAAGAAAATGAAAAGGTATATCGATGCTTCGGGTCCGGTTATAGAATATATTGACAAGCTTTACATTTCTAGGAATATCAGCTTGGACTGGTGA MDIGATPLTVIAESFEGLAKLLVSLNDSSQELRLDVLCDACSLVSVLFNSLGLAFKFAELEYVSKVRDLLEASKKHATLHTILDDDIANDTVKTPGSHSRNLRRVRQGLDLVRALFEQFMSTDDFSLREAASAAYTQVCAPYHTWTVRTAVSAGMYTLPTREQLLLKLNETNQSAEKKMKRYIDASGPVIEYIDKLYISRNISLDW Homology
BLAST of Spg009882 vs. NCBI nr
Match: XP_038892683.1 (ACD11 homolog protein [Benincasa hispida]) HSP 1 Score: 367.1 bits (941), Expect = 1.0e-97 Identity = 186/206 (90.29%), Postives = 197/206 (95.63%), Query Frame = 0
BLAST of Spg009882 vs. NCBI nr
Match: XP_008446579.1 (PREDICTED: ACD11 homolog protein [Cucumis melo] >KAA0034546.1 ACD11-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 360.5 bits (924), Expect = 9.4e-96 Identity = 183/206 (88.83%), Postives = 195/206 (94.66%), Query Frame = 0
BLAST of Spg009882 vs. NCBI nr
Match: XP_004135405.1 (ACD11 homolog protein [Cucumis sativus] >KAE8648789.1 hypothetical protein Csa_009278 [Cucumis sativus]) HSP 1 Score: 360.1 bits (923), Expect = 1.2e-95 Identity = 182/206 (88.35%), Postives = 196/206 (95.15%), Query Frame = 0
BLAST of Spg009882 vs. NCBI nr
Match: XP_022150543.1 (ACD11 homolog protein [Momordica charantia]) HSP 1 Score: 357.5 bits (916), Expect = 8.0e-95 Identity = 182/202 (90.10%), Postives = 190/202 (94.06%), Query Frame = 0
BLAST of Spg009882 vs. NCBI nr
Match: XP_022986036.1 (ACD11 homolog protein [Cucurbita maxima]) HSP 1 Score: 352.4 bits (903), Expect = 2.6e-93 Identity = 179/206 (86.89%), Postives = 193/206 (93.69%), Query Frame = 0
BLAST of Spg009882 vs. ExPASy Swiss-Prot
Match: Q8L7U7 (ACD11 homolog protein OS=Arabidopsis thaliana OX=3702 GN=At4g39670 PE=2 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 2.5e-75 Identity = 141/204 (69.12%), Postives = 168/204 (82.35%), Query Frame = 0
BLAST of Spg009882 vs. ExPASy Swiss-Prot
Match: O64587 (Accelerated cell death 11 OS=Arabidopsis thaliana OX=3702 GN=ACD11 PE=1 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.8e-44 Identity = 93/201 (46.27%), Postives = 138/201 (68.66%), Query Frame = 0
BLAST of Spg009882 vs. ExPASy Swiss-Prot
Match: Q5TA50 (Ceramide-1-phosphate transfer protein OS=Homo sapiens OX=9606 GN=CPTP PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 9.4e-06 Identity = 48/173 (27.75%), Postives = 78/173 (45.09%), Query Frame = 0
BLAST of Spg009882 vs. ExPASy TrEMBL
Match: A0A5A7SXF5 (ACD11-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G005610 PE=4 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 4.6e-96 Identity = 183/206 (88.83%), Postives = 195/206 (94.66%), Query Frame = 0
BLAST of Spg009882 vs. ExPASy TrEMBL
Match: A0A1S3BFD4 (ACD11 homolog protein OS=Cucumis melo OX=3656 GN=LOC103489269 PE=4 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 4.6e-96 Identity = 183/206 (88.83%), Postives = 195/206 (94.66%), Query Frame = 0
BLAST of Spg009882 vs. ExPASy TrEMBL
Match: A0A6J1D9Q2 (ACD11 homolog protein OS=Momordica charantia OX=3673 GN=LOC111018661 PE=4 SV=1) HSP 1 Score: 357.5 bits (916), Expect = 3.9e-95 Identity = 182/202 (90.10%), Postives = 190/202 (94.06%), Query Frame = 0
BLAST of Spg009882 vs. ExPASy TrEMBL
Match: A0A6J1J9Y3 (ACD11 homolog protein OS=Cucurbita maxima OX=3661 GN=LOC111483863 PE=4 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 1.2e-93 Identity = 179/206 (86.89%), Postives = 193/206 (93.69%), Query Frame = 0
BLAST of Spg009882 vs. ExPASy TrEMBL
Match: A0A6J1HUG5 (ACD11 homolog protein-like OS=Cucurbita maxima OX=3661 GN=LOC111467564 PE=4 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 4.7e-93 Identity = 180/206 (87.38%), Postives = 191/206 (92.72%), Query Frame = 0
BLAST of Spg009882 vs. TAIR 10
Match: AT4G39670.1 (Glycolipid transfer protein (GLTP) family protein ) HSP 1 Score: 283.1 bits (723), Expect = 1.8e-76 Identity = 141/204 (69.12%), Postives = 168/204 (82.35%), Query Frame = 0
BLAST of Spg009882 vs. TAIR 10
Match: AT2G34690.1 (Glycolipid transfer protein (GLTP) family protein ) HSP 1 Score: 180.6 bits (457), Expect = 1.2e-45 Identity = 93/201 (46.27%), Postives = 138/201 (68.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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