Spg009871 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg009871
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	elongator complex protein 6
Location	scaffold7: 7777410 .. 7779977 (+)
RNA-Seq Expression	Spg009871
Synteny	Spg009871

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCGAATGACTTCGAATTTGCTTGACGAAGCTCTAGGTCTCGATGATCCGACCAAACCCTCGCCTCTGATCGGCCGTCTGTTGCTCGTCGAGGATTGCGTTGAAACAAGCGGTGCTTTTGTTCTTCACCACCTCCTCAAGCGCGCCTTTTCTTCTCCTCACTCTTCCAATGCCGTCATCTTCGTTGCATTCTCTCAGTCCTTCGCCCACTACGACCGCGTGCTCCGGAAATTGGTAACTTCTCGCTCTCTCGCTGTTTCTGTATGCTTATATGATGTTAATAGTTCAGATTTTTGGCTATCTGTTAGTTCATTTGGCGACGAACGAACTTATTTCAATTGTGGTTTGGGTCTTTTTGTTTTTTTGAACTTGGTTGTCGGTGAGAGAACGATGGTGGAAATTTATTAGTGTTGCTATCAGTGTTGACAACTTAATAAGAACTTACATAAATATGATTTGCACGGACAGTTCTATTGGGTGATTGACGGACATTCCTTTTAGTGCAGTATAGTTTATGAAATTATTGGATGATTAATGATGGGTCTCTCTTCTCATTCATCTGCGATATGATGTGCTAAGATTCTGTCAATTAGTTACATTAATTTAGTGTTCAGAATGAGATGTATTCATTTGTAGAACTATTTTTTAAATAGGGGTGTAACTTAGCTGCTCAAAGGGACAGCGGTAGGTTCTTTTTCTTTGACATGCTTACGCTGGGCTGTTCAGGTGAGAAAACCAGGTATAATATCCTCATTTAAGCTTTTAATTTTTCCCCCTCCCTTTTCTTCAAAAATGTCATTATTTTCTTTATCTGTTGAAGTGGCTTTCTTTCCAATTTGTATAAAAGATGATTAAGTTACAATTAGGAAGGGTTGGTTGCACATCCAGCTATTGATGAAGTAGGTTTTTTCCTCCCCTTTCTACATTTGCAGTGAAGAATATTTTCATAATTCATTAACACCCGAACCCCATACTTCTTCATCACTGAGCTTGGATATCTGGATAACCCTGAAATAAAGATGGCTAGTGTCCTCCTTGATATGATACAAATTTTTCTGTTACCAGATAGTAGTGGAAAGGAAACTGGTGAAGGTGTTCTTGTTGGGCTGTACTGCAAAATTCAGAGAGCTGTTAGTGCCTTAATTCAAGAGAACAAAAAGCATGTCACCATTGTGATAGATGATATAGCTCTTTTGGAGGTTGCTGCCAATGGCTCTTCAAATCATGTCTTGGACTTCCTTCATTATTGCCACACTTTAACATCAGAAATTGTAAGGCTCTTTAAGCTAACCGAATTCTTCTCTTCTTCACATATCCTTGTCATTTTCAATCTGCAGTATTGATACTTTGCTCTTGCCACAGGGTTGTTCCATAATTGCACTTAATCACGAAGATGTGTACATGGACATTGAGAGGCCACTGATTCTACAGATGGAATACCTTGCTGATATTTTGATAAAAGTAGGACCACTAGCCACTGGTATAGCAAAGGACGTTCATGGACAGGTCCCATTTCTTGTTTTCATAACTTTCATGTTTACAAATTTGTTTTATACGCATAATTAGATTTGAATTATTTTCCCCTACATCTTCCCTGGTCGAGAATTGTGCAACTTGAATGTACTTGAACCAAAAAAAAAAAACTTTTCCTGATCTTAATTACCTAAAATTTCCTCCAGATTTCTGGCATTATATGTGAGGGGCTGTTGATGACATTATTGTCTCAATAATGTGATTGTATGGTGTATAGTCCTTATTCCTTAAGATGTCAATAATTTCGTACAAGTTCTATGCTGTAAGCAAGGAAAAGAAATCATAGAAGAATAGTATTTCTTTTGATAAGAGACTTTCTTGACCCCACCTTCATTAATTCTCTCCCTGTAACTGTGCCTTACCGGGCTATTCTGGATGTGACTTTAGTTAATATGTGTTGTTGAGTTTAAAGATACAATACAATGCTAATATGGTTTTAAATCTCAATTACATCATCGTGCTGACAATCATACTTTTTCCTTTTCGTTGTTTGACTTAAATTTATTTAAGTTTGCTGCTTCCAATCATTGTTCGGGTGGTCATAGTCATGTTTCATTTTCTTCTCTGCAGCTGACAGTTTTGAACAAACCAGTTGGAGGCCTGCAAGACAACTTAAGAAACAGAGTGCATAATTTTCACTTTTACATCAAGGAAAATGGTACTGAGTTTTTTTATTCTGGAAGCAGAGCTTGAGGGAAATTTTGGGCAAGAAAAAGTTTGAGGGATATGATAATTATTCCTTTGTACCCTTGTGCCTTTTGTTGCGGTGAAGTCGACTCTTGGTGATGCAATTAGAAGGCGCTCTATCGAGGTTCTCATAGACAGAAAAAGATCGGTTGCAACCGATTTGTTCAGAGTGAAACCACCTAAAACTACTTGCTTGTTTCTTTAGTTAACATTATAACAAAGGGTAAATTTACTTGTTAAAGTCATGTTAAATGAATTTTCTCCCTTTTGTTGTTAATTCGTCTATTTATTTGCTACTTTCATTGCCAGTCAATATTGATAAGAAATACTAGCACTTGATTATTG

mRNA sequence

ATGGACCGAATGACTTCGAATTTGCTTGACGAAGCTCTAGGTCTCGATGATCCGACCAAACCCTCGCCTCTGATCGGCCGTCTGTTGCTCGTCGAGGATTGCGTTGAAACAAGCGGTGCTTTTGTTCTTCACCACCTCCTCAAGCGCGCCTTTTCTTCTCCTCACTCTTCCAATGCCGTCATCTTCGTTGCATTCTCTCAGTCCTTCGCCCACTACGACCGCGTGCTCCGGAAATTGGTAACTTCTCGCTCTCTCGCTGTTTCTGGGTGTAACTTAGCTGCTCAAAGGGACAGCGGTAGGTTCTTTTTCTTTGACATGCTTACGCTGGGCTGTTCAGGTGAGAAAACCAGTGTCCTCCTTGATATGATACAAATTTTTCTGTTACCAGATAGTAGTGGAAAGGAAACTGGTGAAGGTGTTCTTGTTGGGCTGTACTGCAAAATTCAGAGAGCTGTTAGTGCCTTAATTCAAGAGAACAAAAAGCATGTCACCATTGTGATAGATGATATAGCTCTTTTGGAGGTTGCTGCCAATGGCTCTTCAAATCATGTCTTGGACTTCCTTCATTATTGCCACACTTTAACATCAGAAATTGGTTGTTCCATAATTGCACTTAATCACGAAGATGTGTACATGGACATTGAGAGGCCACTGATTCTACAGATGGAATACCTTGCTGATATTTTGATAAAAGTAGGACCACTAGCCACTGGTATAGCAAAGGACGTTCATGGACAGCTGACAGTTTTGAACAAACCAGTTGGAGGCCTGCAAGACAACTTAAGAAACAGAGTGCATAATTTTCACTTTTACATCAAGGAAAATGGTACTGAGTTTTTTTATTCTGGAAGCAGAGCTTGA

Coding sequence (CDS)

ATGGACCGAATGACTTCGAATTTGCTTGACGAAGCTCTAGGTCTCGATGATCCGACCAAACCCTCGCCTCTGATCGGCCGTCTGTTGCTCGTCGAGGATTGCGTTGAAACAAGCGGTGCTTTTGTTCTTCACCACCTCCTCAAGCGCGCCTTTTCTTCTCCTCACTCTTCCAATGCCGTCATCTTCGTTGCATTCTCTCAGTCCTTCGCCCACTACGACCGCGTGCTCCGGAAATTGGTAACTTCTCGCTCTCTCGCTGTTTCTGGGTGTAACTTAGCTGCTCAAAGGGACAGCGGTAGGTTCTTTTTCTTTGACATGCTTACGCTGGGCTGTTCAGGTGAGAAAACCAGTGTCCTCCTTGATATGATACAAATTTTTCTGTTACCAGATAGTAGTGGAAAGGAAACTGGTGAAGGTGTTCTTGTTGGGCTGTACTGCAAAATTCAGAGAGCTGTTAGTGCCTTAATTCAAGAGAACAAAAAGCATGTCACCATTGTGATAGATGATATAGCTCTTTTGGAGGTTGCTGCCAATGGCTCTTCAAATCATGTCTTGGACTTCCTTCATTATTGCCACACTTTAACATCAGAAATTGGTTGTTCCATAATTGCACTTAATCACGAAGATGTGTACATGGACATTGAGAGGCCACTGATTCTACAGATGGAATACCTTGCTGATATTTTGATAAAAGTAGGACCACTAGCCACTGGTATAGCAAAGGACGTTCATGGACAGCTGACAGTTTTGAACAAACCAGTTGGAGGCCTGCAAGACAACTTAAGAAACAGAGTGCATAATTTTCACTTTTACATCAAGGAAAATGGTACTGAGTTTTTTTATTCTGGAAGCAGAGCTTGA

Protein sequence

MDRMTSNLLDEALGLDDPTKPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFAHYDRVLRKLVTSRSLAVSGCNLAAQRDSGRFFFFDMLTLGCSGEKTSVLLDMIQIFLLPDSSGKETGEGVLVGLYCKIQRAVSALIQENKKHVTIVIDDIALLEVAANGSSNHVLDFLHYCHTLTSEIGCSIIALNHEDVYMDIERPLILQMEYLADILIKVGPLATGIAKDVHGQLTVLNKPVGGLQDNLRNRVHNFHFYIKENGTEFFYSGSRA

Homology

[Close]

BLAST of Spg009871 vs. NCBI nr
Match: KAG7031849.1 (Elongator complex protein 6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 487.6 bits (1254), Expect = 7.1e-134
Identity = 249/286 (87.06%), Postives = 257/286 (89.86%), Query Frame = 0


Query: 1   MDRMTSNLLDEALGLDDPTKPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60
           M RMTSNLLDEA+G+DD T  SPL+GRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV
Sbjct: 1   MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60

Query: 61  IFVAFSQSFAHYDRVLRKLVTSRSLAVSGCNLAAQRDSGRFFFFDMLTLGCSGEKTSVLL 120
           IFVAFSQSF HYDRVLRKL         GCNLAAQRDS RFFF DMLT+GCSGEKTS   
Sbjct: 61  IFVAFSQSFVHYDRVLRKL---------GCNLAAQRDSHRFFFLDMLTVGCSGEKTS--- 120

Query: 121 DMIQIFLLPDSSGKETGEGVLVGLYCKIQRAVSALIQENKKHVTIVIDDIALLEVAANGS 180
                FLLPD SGKET EGVLVGLYCKIQRAVSALIQENK HVTIVIDDI LLEVAANGS
Sbjct: 121 ----FFLLPDRSGKETDEGVLVGLYCKIQRAVSALIQENKSHVTIVIDDIPLLEVAANGS 180

Query: 181 SNHVLDFLHYCHTLTSEIGCSIIALNHEDVYMDIERPLILQMEYLADILIKVGPLATGIA 240
           SNHVLDFLHYCHTLTSEIGCSIIAL+HEDVY+DIERPLILQMEYLAD+LIKVGPLATGIA
Sbjct: 181 SNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLADVLIKVGPLATGIA 240

Query: 241 KDVHGQLTVLNKPVGGLQDNLRNRVHNFHFYIKENGTEFFYSGSRA 287
           KDVHGQLTVLNKPVGGLQ+NLRNRVHNF FYIKENGTEFFYSGSRA
Sbjct: 241 KDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKENGTEFFYSGSRA 270

[Close]

BLAST of Spg009871 vs. NCBI nr
Match: XP_038893352.1 (elongator complex protein 6 [Benincasa hispida])

HSP 1 Score: 474.6 bits (1220), Expect = 6.2e-130
Identity = 241/286 (84.27%), Postives = 252/286 (88.11%), Query Frame = 0


Query: 1   MDRMTSNLLDEALGLDDPTKPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60
           M+RMTSNLLDEA+G DDPTKPSPLIGR+LLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV
Sbjct: 1   MNRMTSNLLDEAIGFDDPTKPSPLIGRMLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60

Query: 61  IFVAFSQSFAHYDRVLRKLVTSRSLAVSGCNLAAQRDSGRFFFFDMLTLGCSGEKTSVLL 120
           IF+AFSQSF HYDRVLRKL         GCNLAAQRDSGRF FFDMLTLGCS        
Sbjct: 61  IFIAFSQSFVHYDRVLRKL---------GCNLAAQRDSGRFIFFDMLTLGCS-------- 120

Query: 121 DMIQIFLLPDSSGKETGEGVLVGLYCKIQRAVSALIQENKKHVTIVIDDIALLEVAANGS 180
                    D SGKE+GEGVLVGLYCKIQRAV+ALIQENK+HVTI+IDDI LLEVAANGS
Sbjct: 121 ---------DRSGKESGEGVLVGLYCKIQRAVNALIQENKRHVTIMIDDIPLLEVAANGS 180

Query: 181 SNHVLDFLHYCHTLTSEIGCSIIALNHEDVYMDIERPLILQMEYLADILIKVGPLATGIA 240
           S HVLDFLHYCHTLTSEIGCSIIALNHEDVY+DIERPLILQMEYLAD+LIKVGPLATGIA
Sbjct: 181 STHVLDFLHYCHTLTSEIGCSIIALNHEDVYVDIERPLILQMEYLADVLIKVGPLATGIA 240

Query: 241 KDVHGQLTVLNKPVGGLQDNLRNRVHNFHFYIKENGTEFFYSGSRA 287
           KDVHGQLTVLNKPV GLQD LRNRVHNFHFYIKENGTEFFYSGS+A
Sbjct: 241 KDVHGQLTVLNKPVEGLQDKLRNRVHNFHFYIKENGTEFFYSGSKA 260

[Close]

BLAST of Spg009871 vs. NCBI nr
Match: XP_023533346.1 (elongator complex protein 6 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 469.5 bits (1207), Expect = 2.0e-128
Identity = 241/286 (84.27%), Postives = 250/286 (87.41%), Query Frame = 0


Query: 1   MDRMTSNLLDEALGLDDPTKPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60
           M RMTSNLLDEA+GLDD T  SPL+GRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV
Sbjct: 1   MSRMTSNLLDEAIGLDDSTSLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60

Query: 61  IFVAFSQSFAHYDRVLRKLVTSRSLAVSGCNLAAQRDSGRFFFFDMLTLGCSGEKTSVLL 120
           IF+AFSQSF HYDRVLRKL         GCNLAAQRDS RFFF DMLT+GCS        
Sbjct: 61  IFIAFSQSFVHYDRVLRKL---------GCNLAAQRDSHRFFFLDMLTVGCS-------- 120

Query: 121 DMIQIFLLPDSSGKETGEGVLVGLYCKIQRAVSALIQENKKHVTIVIDDIALLEVAANGS 180
                    D SGKETGEGVLVGLYCKIQRAVSALIQENK+HVTIVIDDI LLEVAANGS
Sbjct: 121 ---------DRSGKETGEGVLVGLYCKIQRAVSALIQENKRHVTIVIDDIPLLEVAANGS 180

Query: 181 SNHVLDFLHYCHTLTSEIGCSIIALNHEDVYMDIERPLILQMEYLADILIKVGPLATGIA 240
           SNHVLDFLHYCHTLTSEIGCSIIAL+HEDVY+DIERPLILQMEYLAD+LIKVGPLATGIA
Sbjct: 181 SNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLADVLIKVGPLATGIA 240

Query: 241 KDVHGQLTVLNKPVGGLQDNLRNRVHNFHFYIKENGTEFFYSGSRA 287
           KDVHGQLTVLNKPVGGLQ+NLRNRVHNF FYIKENGTEFFYSGSRA
Sbjct: 241 KDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKENGTEFFYSGSRA 260

[Close]

BLAST of Spg009871 vs. NCBI nr
Match: XP_022957322.1 (elongator complex protein 6 isoform X1 [Cucurbita moschata])

HSP 1 Score: 464.2 bits (1193), Expect = 8.4e-127
Identity = 239/286 (83.57%), Postives = 249/286 (87.06%), Query Frame = 0


Query: 1   MDRMTSNLLDEALGLDDPTKPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60
           M RMTSNLLDEA+G+DD T  SPL+GRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV
Sbjct: 1   MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60

Query: 61  IFVAFSQSFAHYDRVLRKLVTSRSLAVSGCNLAAQRDSGRFFFFDMLTLGCSGEKTSVLL 120
           IFVAFSQSF HYDRVLRKL         GCNLAAQRDS RFFF DMLT+GCS        
Sbjct: 61  IFVAFSQSFVHYDRVLRKL---------GCNLAAQRDSHRFFFLDMLTVGCS-------- 120

Query: 121 DMIQIFLLPDSSGKETGEGVLVGLYCKIQRAVSALIQENKKHVTIVIDDIALLEVAANGS 180
                    D SGKET EGVLVGLYCKIQRAVSALIQENK+HVTI+IDDI LLEVAANGS
Sbjct: 121 ---------DRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGS 180

Query: 181 SNHVLDFLHYCHTLTSEIGCSIIALNHEDVYMDIERPLILQMEYLADILIKVGPLATGIA 240
           SNHVLDFLHYCHTLTSEIGCSIIAL+HEDVY+DIERPLILQMEYLA+ILIKVGPLATGIA
Sbjct: 181 SNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLAEILIKVGPLATGIA 240

Query: 241 KDVHGQLTVLNKPVGGLQDNLRNRVHNFHFYIKENGTEFFYSGSRA 287
           KDVHGQLTVLNKPVGGLQ+NLRNRVHNF FYIKENGTEFFYSGSRA
Sbjct: 241 KDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKENGTEFFYSGSRA 260

[Close]

BLAST of Spg009871 vs. NCBI nr
Match: XP_022139240.1 (elongator complex protein 6 [Momordica charantia])

HSP 1 Score: 463.0 bits (1190), Expect = 1.9e-126
Identity = 237/285 (83.16%), Postives = 245/285 (85.96%), Query Frame = 0


Query: 1   MDRMTSNLLDEALGLDDPTKPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60
           MDRM SN+LDEALGLDDP KPSPLIGRLLLVEDCVETSGAF+LHHLLKR+ SSP SSNAV
Sbjct: 1   MDRMASNMLDEALGLDDPAKPSPLIGRLLLVEDCVETSGAFLLHHLLKRSLSSPQSSNAV 60

Query: 61  IFVAFSQSFAHYDRVLRKLVTSRSLAVSGCNLAAQRDSGRFFFFDMLTLGCSGEKTSVLL 120
           IF+AFSQ FAHYDRVLRKL         GCNL AQRDSGRF FFDMLTLGCS        
Sbjct: 61  IFIAFSQXFAHYDRVLRKL---------GCNLVAQRDSGRFIFFDMLTLGCS-------- 120

Query: 121 DMIQIFLLPDSSGKETGEGVLVGLYCKIQRAVSALIQENKKHVTIVIDDIALLEVAANGS 180
                    D SGKET EGVLVGLYCKIQRAV+ALIQ+NKKHVTIVIDDI LLEVAANGS
Sbjct: 121 ---------DRSGKETDEGVLVGLYCKIQRAVNALIQQNKKHVTIVIDDIPLLEVAANGS 180

Query: 181 SNHVLDFLHYCHTLTSEIGCSIIALNHEDVYMDIERPLILQMEYLADILIKVGPLATGIA 240
           SNHVLDFLHYCHTLTSEIGCS+IALNHEDVYMD ERP ILQMEYLAD+LIKVGPLATGIA
Sbjct: 181 SNHVLDFLHYCHTLTSEIGCSLIALNHEDVYMDTERPRILQMEYLADVLIKVGPLATGIA 240

Query: 241 KDVHGQLTVLNKPVGGLQDNLRNRVHNFHFYIKENGTEFFYSGSR 286
           KDVHGQLTVLNKPVGGLQDNLRNRV NF FYIKENGTEFFYSGSR
Sbjct: 241 KDVHGQLTVLNKPVGGLQDNLRNRVRNFQFYIKENGTEFFYSGSR 259

[Close]

BLAST of Spg009871 vs. ExPASy Swiss-Prot
Match: Q8L9Y2 (Elongator complex protein 6 OS=Arabidopsis thaliana OX=3702 GN=ELP6 PE=1 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 3.2e-68
Identity = 143/290 (49.31%), Postives = 192/290 (66.21%), Query Frame = 0


Query: 1   MDRMTSNLLDEALGLDDPTK-PSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNA 60
           MDR + NLLD ALG D+    PSPL G+++L+EDCVETSG+FVLH L+KR  SS +SS+A
Sbjct: 1   MDR-SLNLLDLALGFDEQLAIPSPLNGKVILIEDCVETSGSFVLHQLMKRVLSS-NSSDA 60

Query: 61  VIFVAFSQSFAHYDRVLRKLVTSRSLAVSGCNLAAQRDSGRFFFFDMLTLGCSGEKTSVL 120
           +IF+AF++ F+HYDR+LRKL         GCNLA  + + R  FFDML + CS       
Sbjct: 61  LIFLAFARPFSHYDRILRKL---------GCNLATHKSNNRLVFFDMLMVKCS------- 120

Query: 121 LDMIQIFLLPDSSGKETGEGVLVGLYCKIQRAVSALIQENKKHVTIVIDDIALLEVAANG 180
                     D    E     +  L+ +IQ  V  L      ++T+++DD++LLE+A  G
Sbjct: 121 ----------DGDQMEDNVSAVAKLFREIQETVRKLQSVTSGNITVMVDDMSLLEIATTG 180

Query: 181 S-SNHVLDFLHYCHTLTSEIGCSIIALNHEDVYMDIERP-LILQMEYLADILIKVGPLAT 240
           S S+HVLDFLHYCHTL+SE  CS++ LNHED+Y  +ERP  +LQM  LAD++IK  PLA+
Sbjct: 181 SNSDHVLDFLHYCHTLSSESNCSLVILNHEDIYASMERPAFLLQMVCLADVVIKAEPLAS 240

Query: 241 GIAKDVHGQLTVLNKPVGGL-QDNLRNRVHNFHFYIKENGTEFFYSGSRA 287
           G+A DVHGQLTVLNK +    + + RN++ NF F IKENG ++FY G R+
Sbjct: 241 GLANDVHGQLTVLNKGISNSGRGSSRNKLQNFQFRIKENGIDYFYPGCRS 262

[Close]

BLAST of Spg009871 vs. ExPASy Swiss-Prot
Match: Q9GPT6 (Elongator complex protein 6 OS=Dictyostelium discoideum OX=44689 GN=elp6 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.4e-15
Identity = 87/335 (25.97%), Postives = 135/335 (40.30%), Query Frame = 0


Query: 17  DPTKPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNA----------------V 76
           +P K  P  G+L+LV D +E+ G+F++H+ L+  F +  S+N+                 
Sbjct: 20  EPIKSIP-SGKLILVSDTLESEGSFLIHYFLQSIFKATTSTNSSTNNNNSNNSGGVGGGA 79

Query: 77  IFVAFSQSFAHYDRVLRKLVTSRSLAVSGCNLAAQRDSGRFFF----------------- 136
             +  +QS  +Y  V RKL         G NL  + + G F F                 
Sbjct: 80  CLLGLNQSLYNYFNVGRKL---------GYNLTTEYNKGNFTFINGLSTPYKWIIEQRLQ 139

Query: 137 ------------FDMLTLGCSGEKTSVLLDMIQIFLLPDSS------GKETGEGVLVGLY 196
                        D ++ G +   T  L+D   I     SS       K      L  + 
Sbjct: 140 QLEDQGIDEEPQLDSISQGFNPFPTIHLIDNKNITSSSSSSSYSNSNNKNKNNNELKDIL 199

Query: 197 CKIQRAVSALIQENKKHV---------TIVIDDIALLE----VAANGSSNHVLDFLHYCH 256
            KI    +  I ++KK V           +ID + LLE       +GS+  +L+FL YCH
Sbjct: 200 YKI---YNEFINDHKKRVMNNNNNSKTLFIIDGLNLLESHYSTNPSGSNMDILNFLQYCH 259

Query: 257 TLTSE--IGCSIIALNHEDVYMDIERPLILQMEYLADILIKVGPLATGIAKDVHGQLTVL 286
               E    CS+I L H D   D +      ++Y +D+ I +  L +G +KD+ GQL  +
Sbjct: 260 NYIKENSTTCSMIILYHSD--CDEDSKFFNLLQYESDLTINITGLKSGYSKDIDGQLNFI 319

[Close]

BLAST of Spg009871 vs. ExPASy Swiss-Prot
Match: Q8BK75 (Elongator complex protein 6 OS=Mus musculus OX=10090 GN=Elp6 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.0e-15
Identity = 79/265 (29.81%), Postives = 130/265 (49.06%), Query Frame = 0


Query: 26  GRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFAHYDRVLRKLVTSRSL 85
           G L L+ D  +T G+F++HH L        ++  V FVA  QSF+HY+ V +KL      
Sbjct: 19  GTLTLLCD-AKTDGSFLVHHFLSFYLK---ANCKVCFVALVQSFSHYNIVGQKL------ 78

Query: 86  AVSGCNLAAQRDSGRFFFFDMLTLGCSGEKTSV-LLDMIQIFLLPDSSGKETGEGVLVGL 145
              G +L A RD G+  F +       G K+SV +L   Q    P    +E G G L  L
Sbjct: 79  ---GVSLTAARDRGQLVFLE-------GLKSSVEVLFHSQDEPHPLQFLREAGTGNLQSL 138

Query: 146 YCKIQRAVSALIQENK--KHVTIVIDDIALLEVAANGSSNHVLDFLHYCH-TLTSEIGCS 205
           Y  IQ  +     E    K+  +++D++++L ++    +  VLDF+ YC  T+  E+  +
Sbjct: 139 YTFIQDTLKPADSEESPWKYPVLLVDNLSVL-LSLGVGAVAVLDFMQYCRATVCCELKGN 198

Query: 206 IIALNH--EDVYMDIERPLILQMEYLADILIKVGPLATGIAKDVHGQLTVL-NKPVGGLQ 265
           ++AL H  E    +    L+  + + + ++++   LATG  KDVHGQL++L  +P     
Sbjct: 199 VVALVHDTEGATDEGNDTLLNGLSHQSHLILRAEGLATGFCKDVHGQLSILWRRPSRSTA 258

Query: 266 DNLRNRVHNFHFYIKENGTEFFYSG 284
              R +   + + I++    FF  G
Sbjct: 259 Q--RAQSLTYQYKIQDKNVSFFAKG 260

[Close]

BLAST of Spg009871 vs. ExPASy Swiss-Prot
Match: Q0IHA2 (Elongator complex protein 6 OS=Xenopus laevis OX=8355 GN=elp6 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.3e-15
Identity = 78/284 (27.46%), Postives = 138/284 (48.59%), Query Frame = 0


Query: 9   LDEALGLDDPTKPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQS 68
           L+  LG+   T  +  +G+  L+ D   T G+F++HH L        +   V FVA  QS
Sbjct: 5   LNSLLGV---TTDTLTLGKFTLLCDS-NTDGSFLVHHFLSYYL---RAGCRVCFVALVQS 64

Query: 69  FAHYDRVLRKLVTSRSLAVSGCNLAAQRDSGRFFFFDML---TLGCSGEKTSVLLDMIQI 128
           F+HY+ V +KL         G NL++ +D G+  F + L   T    G+K+         
Sbjct: 65  FSHYNIVAQKL---------GVNLSSAKDEGQLVFLEGLKSYTDLLFGDKSEAEETNPLC 124

Query: 129 FLLPDSSGKETGEGVLVGLYCKIQRAVSALIQENKKHVTIVIDDIALLEVAANGSSNHVL 188
           FL   S         L  LY  +  A++    +  K   +++DD+++L ++   +S  VL
Sbjct: 125 FLRAGSD--------LRPLYSFVSAALAPSAGQPWKCPVLILDDLSVL-LSLGVTSLQVL 184

Query: 189 DFLHYCH-TLTSEIGCSIIALNH-EDVYMDIERPLILQ-MEYLADILIKVGPLATGIAKD 248
           DF+HYC  T+ ++   +++ L H  +   D E  L+L+ + + + ++++   L+TG  KD
Sbjct: 185 DFMHYCRATVCTQYKGNVLCLVHGAEESGDEENELVLRSLSHQSHLILQAEGLSTGFCKD 244

Query: 249 VHGQLTVLNKPVGGLQDNLRNRVHNFHFYIKENGTEFFYSGSRA 287
           VHGQL ++   V   +   +N+   + + I++    FF  G  A
Sbjct: 245 VHGQLKIIRGAVSSGKRG-KNQPEIYQYKIQDKHVAFFARGLSA 262

[Close]

BLAST of Spg009871 vs. ExPASy Swiss-Prot
Match: B2RYG8 (Elongator complex protein 6 OS=Rattus norvegicus OX=10116 GN=Elp6 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-14
Identity = 81/268 (30.22%), Postives = 132/268 (49.25%), Query Frame = 0


Query: 26  GRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAVIFVAFSQSFAHYDRVLRKLVTSRSL 85
           G+L L+ D  +T G+F++HH L        ++  V FVA  QSF+HY+ V +KL      
Sbjct: 19  GKLTLLCD-AKTDGSFLVHHFLSFYLK---ANCKVCFVALVQSFSHYNIVGQKL------ 78

Query: 86  AVSGCNLAAQRDSGRFFFFDMLTLGCSGEKTSV-LLDMIQIFLLPDSSGKETGEGVLVGL 145
              G +L A R+ G+  F +       G K+SV +L   Q    P    +E G G L  L
Sbjct: 79  ---GVSLTAARERGQLVFLE-------GLKSSVEVLFHSQEEPHPLQFLREAGAGNLQSL 138

Query: 146 YCKIQRAVSALIQENK--KHVTIVIDDIALLEVAANGSSNHVLDFLHYCH-TLTSEIGCS 205
           Y  IQ  +          K   +++D++++L ++    +  VLDF+ YC  T+  E+  +
Sbjct: 139 YTFIQDTLKPADSGESPWKCPVLLVDNLSVL-LSLGVGAVAVLDFMQYCRATVCCELKGN 198

Query: 206 IIALNHEDVYMDIERPLIL--QMEYLADILIKVGPLATGIAKDVHGQLTVLNKPVGGLQD 265
           ++AL H+    + E   IL   + + + ++++   LATG  KDVHGQL++L +       
Sbjct: 199 VVALVHDTEGAEDEENNILLNGLSHQSHLILRTQGLATGFCKDVHGQLSILWRR-SSQPT 258

Query: 266 NLRNRVHNFHFYIKENGTEFFYSG-SRA 287
             R R   + + I++    FF  G SRA
Sbjct: 259 AQRARSLTYQYKIQDKNVSFFAKGMSRA 264

[Close]

BLAST of Spg009871 vs. ExPASy TrEMBL
Match: A0A6J1GYT6 (elongator complex protein 6 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458756 PE=3 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 4.1e-127
Identity = 239/286 (83.57%), Postives = 249/286 (87.06%), Query Frame = 0


Query: 1   MDRMTSNLLDEALGLDDPTKPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60
           M RMTSNLLDEA+G+DD T  SPL+GRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV
Sbjct: 1   MSRMTSNLLDEAIGIDDSTNLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60

Query: 61  IFVAFSQSFAHYDRVLRKLVTSRSLAVSGCNLAAQRDSGRFFFFDMLTLGCSGEKTSVLL 120
           IFVAFSQSF HYDRVLRKL         GCNLAAQRDS RFFF DMLT+GCS        
Sbjct: 61  IFVAFSQSFVHYDRVLRKL---------GCNLAAQRDSHRFFFLDMLTVGCS-------- 120

Query: 121 DMIQIFLLPDSSGKETGEGVLVGLYCKIQRAVSALIQENKKHVTIVIDDIALLEVAANGS 180
                    D SGKET EGVLVGLYCKIQRAVSALIQENK+HVTI+IDDI LLEVAANGS
Sbjct: 121 ---------DRSGKETDEGVLVGLYCKIQRAVSALIQENKRHVTILIDDIPLLEVAANGS 180

Query: 181 SNHVLDFLHYCHTLTSEIGCSIIALNHEDVYMDIERPLILQMEYLADILIKVGPLATGIA 240
           SNHVLDFLHYCHTLTSEIGCSIIAL+HEDVY+DIERPLILQMEYLA+ILIKVGPLATGIA
Sbjct: 181 SNHVLDFLHYCHTLTSEIGCSIIALSHEDVYLDIERPLILQMEYLAEILIKVGPLATGIA 240

Query: 241 KDVHGQLTVLNKPVGGLQDNLRNRVHNFHFYIKENGTEFFYSGSRA 287
           KDVHGQLTVLNKPVGGLQ+NLRNRVHNF FYIKENGTEFFYSGSRA
Sbjct: 241 KDVHGQLTVLNKPVGGLQENLRNRVHNFQFYIKENGTEFFYSGSRA 260

[Close]

BLAST of Spg009871 vs. ExPASy TrEMBL
Match: A0A6J1CBS2 (elongator complex protein 6 OS=Momordica charantia OX=3673 GN=LOC111010200 PE=3 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 9.1e-127
Identity = 237/285 (83.16%), Postives = 245/285 (85.96%), Query Frame = 0


Query: 1   MDRMTSNLLDEALGLDDPTKPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60
           MDRM SN+LDEALGLDDP KPSPLIGRLLLVEDCVETSGAF+LHHLLKR+ SSP SSNAV
Sbjct: 1   MDRMASNMLDEALGLDDPAKPSPLIGRLLLVEDCVETSGAFLLHHLLKRSLSSPQSSNAV 60

Query: 61  IFVAFSQSFAHYDRVLRKLVTSRSLAVSGCNLAAQRDSGRFFFFDMLTLGCSGEKTSVLL 120
           IF+AFSQ FAHYDRVLRKL         GCNL AQRDSGRF FFDMLTLGCS        
Sbjct: 61  IFIAFSQXFAHYDRVLRKL---------GCNLVAQRDSGRFIFFDMLTLGCS-------- 120

Query: 121 DMIQIFLLPDSSGKETGEGVLVGLYCKIQRAVSALIQENKKHVTIVIDDIALLEVAANGS 180
                    D SGKET EGVLVGLYCKIQRAV+ALIQ+NKKHVTIVIDDI LLEVAANGS
Sbjct: 121 ---------DRSGKETDEGVLVGLYCKIQRAVNALIQQNKKHVTIVIDDIPLLEVAANGS 180

Query: 181 SNHVLDFLHYCHTLTSEIGCSIIALNHEDVYMDIERPLILQMEYLADILIKVGPLATGIA 240
           SNHVLDFLHYCHTLTSEIGCS+IALNHEDVYMD ERP ILQMEYLAD+LIKVGPLATGIA
Sbjct: 181 SNHVLDFLHYCHTLTSEIGCSLIALNHEDVYMDTERPRILQMEYLADVLIKVGPLATGIA 240

Query: 241 KDVHGQLTVLNKPVGGLQDNLRNRVHNFHFYIKENGTEFFYSGSR 286
           KDVHGQLTVLNKPVGGLQDNLRNRV NF FYIKENGTEFFYSGSR
Sbjct: 241 KDVHGQLTVLNKPVGGLQDNLRNRVRNFQFYIKENGTEFFYSGSR 259

[Close]

BLAST of Spg009871 vs. ExPASy TrEMBL
Match: A0A6J1JAX8 (elongator complex protein 6 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485133 PE=3 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.5e-126
Identity = 238/286 (83.22%), Postives = 249/286 (87.06%), Query Frame = 0


Query: 1   MDRMTSNLLDEALGLDDPTKPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60
           M RMTSNLLDEA+GLDD T  SPL+GRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV
Sbjct: 1   MSRMTSNLLDEAIGLDDSTSLSPLVGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60

Query: 61  IFVAFSQSFAHYDRVLRKLVTSRSLAVSGCNLAAQRDSGRFFFFDMLTLGCSGEKTSVLL 120
           IF+AFSQSF HY+RVLRKL         GCNLAAQRDS RFFF DMLT+GCS        
Sbjct: 61  IFIAFSQSFVHYERVLRKL---------GCNLAAQRDSHRFFFLDMLTVGCS-------- 120

Query: 121 DMIQIFLLPDSSGKETGEGVLVGLYCKIQRAVSALIQENKKHVTIVIDDIALLEVAANGS 180
                    D SGKETGEGVLVGLYCKIQRAVSALIQENK+HVTIVIDDI LLEVAANGS
Sbjct: 121 ---------DRSGKETGEGVLVGLYCKIQRAVSALIQENKRHVTIVIDDIPLLEVAANGS 180

Query: 181 SNHVLDFLHYCHTLTSEIGCSIIALNHEDVYMDIERPLILQMEYLADILIKVGPLATGIA 240
           SNHVLDFLHYCHTLTSEIG SIIAL+HEDVY+DIERPLILQMEYLAD+LIKVGPLATGIA
Sbjct: 181 SNHVLDFLHYCHTLTSEIGGSIIALSHEDVYLDIERPLILQMEYLADVLIKVGPLATGIA 240

Query: 241 KDVHGQLTVLNKPVGGLQDNLRNRVHNFHFYIKENGTEFFYSGSRA 287
           KDVHGQLTVLNKPVGGL++NLRNRVHNF FYIKENGTEFFYSGSRA
Sbjct: 241 KDVHGQLTVLNKPVGGLEENLRNRVHNFQFYIKENGTEFFYSGSRA 260

[Close]

BLAST of Spg009871 vs. ExPASy TrEMBL
Match: A0A0A0KLF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G176020 PE=3 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 6.5e-125
Identity = 237/286 (82.87%), Postives = 245/286 (85.66%), Query Frame = 0


Query: 1   MDRMTSNLLDEALGLDDPTKPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60
           MDRMTSNLLDEA+G DDPT   PLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSN V
Sbjct: 1   MDRMTSNLLDEAIGFDDPT---PLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNVV 60

Query: 61  IFVAFSQSFAHYDRVLRKLVTSRSLAVSGCNLAAQRDSGRFFFFDMLTLGCSGEKTSVLL 120
           IF+AFSQSF HYDR+LRKL         GCNLAAQRDSGRF FFDMLTLGCS        
Sbjct: 61  IFLAFSQSFIHYDRILRKL---------GCNLAAQRDSGRFVFFDMLTLGCS-------- 120

Query: 121 DMIQIFLLPDSSGKETGEGVLVGLYCKIQRAVSALIQENKKHVTIVIDDIALLEVAANGS 180
                    D SGKETGEGVLVGLYCKIQRAV ALIQENKKHVTIVIDDI+LLEVAANGS
Sbjct: 121 ---------DRSGKETGEGVLVGLYCKIQRAVHALIQENKKHVTIVIDDISLLEVAANGS 180

Query: 181 SNHVLDFLHYCHTLTSEIGCSIIALNHEDVYMDIERPLILQMEYLADILIKVGPLATGIA 240
           SNHVLDFLHYCHTL SE+GCSIIAL+HEDVYMDIERPL LQ+EYLAD+LIKVGPLATGIA
Sbjct: 181 SNHVLDFLHYCHTLLSEVGCSIIALDHEDVYMDIERPLSLQLEYLADVLIKVGPLATGIA 240

Query: 241 KDVHGQLTVLNKPVGGLQDNLRNRVHNFHFYIKENGTEFFYSGSRA 287
           KDVHGQLTVLNKPV GLQD LRNRV NF FYIKENGTEFFYSGSRA
Sbjct: 241 KDVHGQLTVLNKPVEGLQDKLRNRVQNFQFYIKENGTEFFYSGSRA 257

[Close]

BLAST of Spg009871 vs. ExPASy TrEMBL
Match: A0A5A7SX52 (Elongator complex protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00250 PE=3 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 4.7e-123
Identity = 232/286 (81.12%), Postives = 244/286 (85.31%), Query Frame = 0


Query: 1   MDRMTSNLLDEALGLDDPTKPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNAV 60
           MDRM SNLLD A+G DDPT PSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSP+SSNAV
Sbjct: 1   MDRMASNLLDGAIGFDDPTNPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPNSSNAV 60

Query: 61  IFVAFSQSFAHYDRVLRKLVTSRSLAVSGCNLAAQRDSGRFFFFDMLTLGCSGEKTSVLL 120
           IF+AFSQSF HYDR+LRKL         GCNLAAQRD+GRF FFDMLTLGCS        
Sbjct: 61  IFLAFSQSFVHYDRILRKL---------GCNLAAQRDNGRFVFFDMLTLGCS-------- 120

Query: 121 DMIQIFLLPDSSGKETGEGVLVGLYCKIQRAVSALIQENKKHVTIVIDDIALLEVAANGS 180
                    D SGKET EGVLVGLYCKIQRAV ALIQENKKHVTIVIDDI+LLEVAANGS
Sbjct: 121 ---------DRSGKETDEGVLVGLYCKIQRAVDALIQENKKHVTIVIDDISLLEVAANGS 180

Query: 181 SNHVLDFLHYCHTLTSEIGCSIIALNHEDVYMDIERPLILQMEYLADILIKVGPLATGIA 240
           SN VLDFLHYCHTL SE+GCSII+L+HEDVYMDI+RPL LQ+EYLAD+LIKVGPLATGIA
Sbjct: 181 SNLVLDFLHYCHTLLSEVGCSIISLDHEDVYMDIKRPLSLQLEYLADVLIKVGPLATGIA 240

Query: 241 KDVHGQLTVLNKPVGGLQDNLRNRVHNFHFYIKENGTEFFYSGSRA 287
           KDVHGQLTVLNKPV GLQD LRNRV NF FYIKENGTEFFYSGSRA
Sbjct: 241 KDVHGQLTVLNKPVEGLQDKLRNRVQNFQFYIKENGTEFFYSGSRA 260

[Close]

BLAST of Spg009871 vs. TAIR 10
Match: AT4G10090.1 (elongator protein 6 )

HSP 1 Score: 260.0 bits (663), Expect = 2.2e-69
Identity = 143/290 (49.31%), Postives = 192/290 (66.21%), Query Frame = 0


Query: 1   MDRMTSNLLDEALGLDDPTK-PSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNA 60
           MDR + NLLD ALG D+    PSPL G+++L+EDCVETSG+FVLH L+KR  SS +SS+A
Sbjct: 1   MDR-SLNLLDLALGFDEQLAIPSPLNGKVILIEDCVETSGSFVLHQLMKRVLSS-NSSDA 60

Query: 61  VIFVAFSQSFAHYDRVLRKLVTSRSLAVSGCNLAAQRDSGRFFFFDMLTLGCSGEKTSVL 120
           +IF+AF++ F+HYDR+LRKL         GCNLA  + + R  FFDML + CS       
Sbjct: 61  LIFLAFARPFSHYDRILRKL---------GCNLATHKSNNRLVFFDMLMVKCS------- 120

Query: 121 LDMIQIFLLPDSSGKETGEGVLVGLYCKIQRAVSALIQENKKHVTIVIDDIALLEVAANG 180
                     D    E     +  L+ +IQ  V  L      ++T+++DD++LLE+A  G
Sbjct: 121 ----------DGDQMEDNVSAVAKLFREIQETVRKLQSVTSGNITVMVDDMSLLEIATTG 180

Query: 181 S-SNHVLDFLHYCHTLTSEIGCSIIALNHEDVYMDIERP-LILQMEYLADILIKVGPLAT 240
           S S+HVLDFLHYCHTL+SE  CS++ LNHED+Y  +ERP  +LQM  LAD++IK  PLA+
Sbjct: 181 SNSDHVLDFLHYCHTLSSESNCSLVILNHEDIYASMERPAFLLQMVCLADVVIKAEPLAS 240

Query: 241 GIAKDVHGQLTVLNKPVGGL-QDNLRNRVHNFHFYIKENGTEFFYSGSRA 287
           G+A DVHGQLTVLNK +    + + RN++ NF F IKENG ++FY G R+
Sbjct: 241 GLANDVHGQLTVLNKGISNSGRGSSRNKLQNFQFRIKENGIDYFYPGCRS 262

The following BLAST results are available for this feature:

BLAST of Spg009871 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031849.1	7.1e-134	87.06	Elongator complex protein 6 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038893352.1	6.2e-130	84.27	elongator complex protein 6 [Benincasa hispida]	[more]
XP_023533346.1	2.0e-128	84.27	elongator complex protein 6 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022957322.1	8.4e-127	83.57	elongator complex protein 6 isoform X1 [Cucurbita moschata]	[more]
XP_022139240.1	1.9e-126	83.16	elongator complex protein 6 [Momordica charantia]	[more]

BLAST of Spg009871 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9Y2	3.2e-68	49.31	Elongator complex protein 6 OS=Arabidopsis thaliana OX=3702 GN=ELP6 PE=1 SV=1	[more]
Q9GPT6	2.4e-15	25.97	Elongator complex protein 6 OS=Dictyostelium discoideum OX=44689 GN=elp6 PE=3 SV...	[more]
Q8BK75	4.0e-15	29.81	Elongator complex protein 6 OS=Mus musculus OX=10090 GN=Elp6 PE=2 SV=1	[more]
Q0IHA2	5.3e-15	27.46	Elongator complex protein 6 OS=Xenopus laevis OX=8355 GN=elp6 PE=2 SV=1	[more]
B2RYG8	1.5e-14	30.22	Elongator complex protein 6 OS=Rattus norvegicus OX=10116 GN=Elp6 PE=2 SV=1	[more]

BLAST of Spg009871 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GYT6	4.1e-127	83.57	elongator complex protein 6 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1CBS2	9.1e-127	83.16	elongator complex protein 6 OS=Momordica charantia OX=3673 GN=LOC111010200 PE=3 ...	[more]
A0A6J1JAX8	1.5e-126	83.22	elongator complex protein 6 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114851...	[more]
A0A0A0KLF1	6.5e-125	82.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G176020 PE=3 SV=1	[more]
A0A5A7SX52	4.7e-123	81.12	Elongator complex protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]

BLAST of Spg009871 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10090.1	2.2e-69	49.31	elongator protein 6	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018627	Elongator complex protein 6	PFAM	PF09807	ELP6	coord: 22..273 e-value: 6.7E-28 score: 97.8
IPR018627	Elongator complex protein 6	PANTHER	PTHR16184	ELONGATOR COMPLEX PROTEIN 6	coord: 1..285
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 19..282 e-value: 1.8E-31 score: 111.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg009871.1	Spg009871.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0002098	tRNA wobble uridine modification
cellular_component	GO:0033588	elongator holoenzyme complex