Spg009730 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg009730
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein RDM16 isoform X1
Location	scaffold7: 7673817 .. 7680229 (+)
RNA-Seq Expression	Spg009730
Synteny	Spg009730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATTTAATACTTTAAAAAACATTAATAAAAAAAAATTAAAGATAATAGAATCATTATCTATTGTTGTGATTTTATAGAGAAAATCAACAAATATATTCACGTCCTACAGATTAAACTTAAAAAATTATAGAATCTAAAAGAAATCATAACAATTATTGATGTTATATTATTTAAAAGAAACTAGATACATTTATAAAAGAGATAATACTAGAATCAAAATCAGCATAGCTTAACATGTACCAATCAAGAGATCAGAGGTTCGGAACAACACCACCAAATATTGTTGAACTCGAAAAAAAAAAAAAAAAAAAAAAACTTCGTACACTTAAATAAAAAAAGGATAAAAGAAAAATCTATTCCAACCCCCAGAAACTTCATGTCTGTTTTTCTTTTTTATTTTTTAAACTCAGCCCACTAATTTAGCCCACACTGTAAAATAGAAGAGAAATGAATAAAAGAAGGAAACCTAACATCTCAGGCCCCATCTTCTTCTTCGCGCTGTTTCCTCCTCCGTTTCAGCAGCTCAGTGTCGCCGACGCCTCTCTCCCGTTCACTGCTGCCGCAGCCGTCGTCTTCCTTCCGTTCATGCCGCTGTAGTCTCCCTTGATTTTCTACTCCCTTGCTGTTACTGGTATTTTCCCAATCTCCATCTATGTCGTTCTGCTTACTTGAAAAACTCAAATTAGAACTTGTCTGATAAAAGAATAGAGGAGCTGTTTGATTTTCTTTTTTATAATAGCAATAGACGAATAGTAACAAAAAAACGGAACAAAAAACGGGAGACTGATCTCGAGGGCACAATTGGTACATATACGATGGAAAGATGGTTTTGAGGTGCTGCATTTTTTTTTTTGTTTTGTTTTGTTTTGTTTTTGTTTTTTGTTTTGACAACATGAGACACTGCATTCTTGGTAGAGAGAAAAGGAATTGGATTGAAAAAAAACCAAACCAGATTGAAGGTATTGCGTTTGTTTGTGAATTGTTCTCCCTCCCATCAGGCAACTCAAATTAGGACTTGGTTTGATGGTAGACTGTAATGTTGATGAGTTGTTAGATTAAAATATTTTGTAGGAAGTCAACGAGTCGTTTTTTGAAAATTGAAGTTGGAACTTGAAATTCTCTAATGAATGGTGCTTGGAATGAGAAGTGTCATAAGTTCTTGTGTAATAAAAATTAGATTATAATAGATTTTGATTATTTTGTAGGAAGTCAATGATTCGTTTTTTGAAAATTGAAGTCCGTCTCTTGAATTTTTCTAATGAATGGTGTTTGGAATGAGAAGAGTCCATAGGTTTTTGTGTAATAAAAATAAGATGGTAATAGACGTTGATGAGTTATTGAATTAAAATATTTTGTAGGGAGCCAATGAGTTGCTTTTTGAAAATTGAAGTTGTATTTCTTCCGTTCGTCCCGCCGCTGCCACCGTCGTATTTCTTCCATTCTTCCTGTCGCAGCCTCTGTCCTAGCGATTTTGCACTGATTTTCTAATCATTTGAGGTATTCTCTCAATCTCCATCTATGTCTTTCTTCTCAATTGAAAAATAGAAATTAGAACTTGTCTAATAAAAGAGTGGAGAAGTTGTTTGATTTATTGATTATTTTTTTTTTTAAATAACATTAGACGAATAGCAAGTGAAGAAAGGGGACAAAAACGGGAGAGATTGTCGTCGAGGACGCAATTGGGGCAGAGACGACGGAAGGATCCAACACTCGGACCAAGATTGCTACTATATTGACATAGAGAAAAGGACTTGGATTGATAAAAAGAACCAAACCCGATCGAAGGTATTGTCTTTTGATTATAAATTGTTCTCCATTCCTTCCATCGGACAACTGAAATAGGTCTTAGTATGATGGAGTTGCTTTGTTTGACTAAACAAGCTCCAAATATTTATAATAGTAGATTATAATAGATTTTGATGAGTTATTGAATTAAAATGAGTTGTAGGAAGCTTATGAGCCATTTTTTAAGAATTGAAGTTGTCTATTGAAATTCTCTCATGAACGGTACTTGGAATGGGGAGAGTCTATAGGTTTCTTTTTAACAAAAATAGAGGGGTACATTCATTAATAGCATACAATAAATTGAAAAGCCAACTTAGTGGTTCACTATCTTGAACCAACACACTCTTTCATTCCCAACACTTTGTCCCAATTCCAATACATTCAATGGATGTACTTAAAAGAATGAGGTAAAATAGGCATATATTAAAAATTTGGAGGCCAAAATGGGAAGATAAAGTTTTTCCCTTTAGCCACTTTTGTAGAAGTATAGATAGATTATTTACTTGACAATGGCTTTGAATAAGATAAAATTTATAGTATTTTAGTAGCATAGAAAACTTTCATTCTACCATGGGGTGTCTATCATTATAATGATGTGTCTAAGTATGAATGGAAAGAGTGTATTACTAATTTATCACAGTACTATAAGAATTTGTGATTGAATGGTAATCCATAATTTAGCAATGTCCCTAATTTTTTTTTTTAAATTATTGTTATAATTACAAACGTTTAGGAGTTAGCTTAGACACCAGTAAAGTAGGTTTTCTTTAGTAAACATGTGAAGTAGTTAAGAATCTAAGATATTTATTAAGAGCAAAACTTTCTCGCTGACAATACATACATCAATCCTTCTTTTGTTTAAATTTCTATTTTCTTAACACTTAAAGAAATCGAGGGAAACATACGAGAAAGAAGTGTGATCTGCCCCCAATGAAATGCTGTTATCTTCATCAGAATATCGTTTTAAAAAAATGTTGGAACGACTCTAATCTAATGGACACAATGATTTGCCAAAAACTATATCATCTTTATTTGCATGAATGATCTTCAACACATAAATAGATTTCCTCCCTTCATTCAAAGTTGCTCGTATTTTAGTCAATAATATGTGGGAGTAGAGATCGAAAACTTTGACCTTTTGATGGGAGTTATAATAACTTGACCGATTGAGCTATTGTCAGGTTTACTACGTTAAAATTTGATTGAGTTTTTTTTTTCCCCCATTAGTGGAGTGCGGTGCACAAAAACTGATAGAAACCTTCATCATAAACGTGAGCCGCAATTGTGCTGCCCATCCGGACCGGACGACCTCTCTCACTGATCAGGAGTAGATAGAGCGAAACCCTAGAGAAAGAAGAAGAAGAAAGTGGGAAGGACCTTCAGGTTCTGAGCCTGTGTGGAGCCCTGAAAAATGGATAGGGTTTCTGAGAAGGAGAAATCAAGCAAGCGTTCCCGAGAAGAACGCGACCGAGACCCTTATTTGTCCCAGGAAATGGATGGGACATCTTCAATTGCTGGGAGAAGTGGAAATCTCTCTCTTGATGCTTTAGCGAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAGTTGGCTGAGAAGTTGAAGAAAATTCCCCTGGTAAGTTTCAAAACATCGATGCTATGACCTATTTTTGCTAATTTCACCACCCTCTGATGTTGCTTTTACATGGATGCATGTGCGTGTGTTTTATATTGGTTGTTTCCTTTGTGTATCAAGTTTTATTGTTTGATCTTATATAGATGAAGAAGGCTAAAGTAGCAGGTAGCTCAGTGTTGAAACCAGAGGAGAAAGCTAAAGCAGCAGGTAGTGTATTAGGGCCATCGCCACCTACAAATGTTGCCACAGCCCTTTCTTCTGCGGCATCATCAAGTTCGTTGACCTTACCTGCTGCCAATGCACTTGGTGGTGGTATTAATGTTCCGGCTGGCCTTACCTCTATACCCCATTTTGAGGCTGTCAAACGTGCACAGGAGCTTGCTGCCAGGATGGGATTTCGCCAGGATCCAGAGTTTGCTCCTCTCATAAATTTGTTTCCAGGGAATATAGCAGCGGATGTTGCTGTTCCACAGAAGCCAACCAAGGCCCCTGTTCTTCGTCTTGATGCACTTGGCAGGGAAATAGACGAACAAGGAAATGTGGTCAATATAACCAAACCTAGCAACCTTAGCACTCTAAAGGTTTGGATTTGGAATGAACTTATGACCTTTTTAGAGGTTTTCTTTATTTTATTAACTTTAAATGGATTGACATTATATATATTCTTAATTTTGCAGGTTAACATCAACAAGCAGAAAAAGGACGCATTTCAAATTCTTAAACCTGAGCTTGATGTGGATCCCGATTCAAATCCTCATTACGATGAGAGGATGGGTATAAATAAAACTAAATTGTTGAGGCCAAAGAGGATGAGTTTCCAGTTTGTGGAGGAAGGGAAATGGTCTAAGGAGGCCGAGACCATAAAATTGAGGGTAATTATAGTTTGTTAATACTTTCTTTTGGTGAAAAAATGATCGTGTAATTTATAAAAAAAAAAAAAATCCTTATTTTCTTGTTACAGAGTAAATTTGGAGAGGCACAAGCCAAAGAACGAAAGGAGAAGCAGGCCCAATTGGCCAAGGCAAAGGCTGCACCTGATATAAATCCGAATTTGATCGAGGTATCAGAGAGAGTTATAGTGAAGGAAAAAACGAAAGATCCAATTCCTGAAATTGAGTGGTGGTAAGCTGATATTTACTTTCAATACTTGTAATTCCAAGTATTTTTTAGTTTTCCATTTTATGATTCTTCAATCAATGATATGTTTGTCTGTGTTTGTGTGGAAATTTTCTTTGTGGTAAATAGTTACATTAAGGGAATGTTTTCAGGTATCAAGTTTGCATGTCTTTTTCCTTCATTATTTATGGGCTGTTTGGTTCAAGATTTGCATAGGATGACATTTCCTGGAAGTAGAATGCGTGAAATTAAGATGTTTGGGAATATAGTATCTTTGTGCTTTGGGCCAAAACGAGCATGGCGGTAATTGGCATGTACCCTTGACCAAGAGGTCAGGTTCAAATCCCCCCACCCCCAAATGTTGTTATACTAAAAAAATAGTATCTCTGTGCTTTGGTGTATTGACGTTACGAAGTGTTGGATACAATTGCAATCTTGATTTATTTCGGCCGTTAGGAAGCTTGTATATCATCTAGGAACAGAGGAGGGCAGTTCTTTTTTGACTTTTGTATTCTATAATTTGATAGGAGTTGAGCAAACTGCATATATTCTTTTCCCGTTTCTCCTTTTGCTTTCTAGCATTTTGTTAATTTCTAGCTTATGTTGGGAATTGGGATCCCTTATGAGATCCAATTCTAATATTTTGTTATTTTTTAAAAACTATGTAGGGATGTCCCTCTTTTGCATTTTGGCACATACGACGGCGTGGGAGATGGTTTTGTGGCCGATGATAAAATAAGGAAGGATAAGATTATGATATATGTGGAGCATCCTCGTCCAATTGAACCTCCTGCTGAGCCAGCTCCTCCACCTCCTCAACCCCTAAAGCTAACAAAGAAGGAGCAGAAAAAACTCCGGACACAGCGTCGTCTTGCAAAAGAGAAAGACAGACAGGAGATGATTAGACAAGGCCTGATAGAACCACCCAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCAGAAGCAACCCAAGATCCTACTAAACTCGAGAAAGAGATTCGTGCTGCAGCTGCTGAGAGGGAACAGGCTCACATAGATAGAAATATTGCCCGTAAACTTACCCCTGCAGAACGTCGTGAGAAGAAAGAACGGAAACTCTTTGACGATACAAATTCACTGGAGACAATCGTGTCTGTTTACAAGATCAATGATTTATCACACCCACAGGCCCGGTTTAAAGTCGATGTTAATGCAAGGGAGAACCGTTTGACTGGATGTGCTGTGATATGTGATGGCATCAGTGTTCTGGTTGTTGAAGGGGGAAGCAAATCCATCAAGAGGTATGGGAAGCTTATGCTTAGGCGTATAAATTGGGCTGCTTCTGTGAAGGAGGACGAAGAGGAGGACGAAAACGACGACAAGCCTGTTAACAAATGTTCATTGGTATGGCAAGGAAATGTTGCCAAATCTAGCTTCAATAAATTTTTTATCCAGGAGTGCATGACGGAGGCAGCTGCTAGGAAGATTTTTGCTGATGCTGGTGTTGGTCACTATTGGGATCTTGCCGTTAACTTTTCCGATGATCAAATATAATTGAACTTCTGCACTAGTAGATTTTGTTTCTTTCTAATCTGCAGGTTCGTAAGAGATTTGAATCCAAGGCAAAGCTCTGATCAATTGAATTTCGATCCGTTGAGTTATGATTAAGGGCAAGTTTGATATAACTCGGTATTGTCGACCATCTTAATAACGTTTAGTTTTATAGTACAAATTTCATTTGAAAATCATCGAACACCTGGGATGTGTTCGGGGTTGAAAATCTTCATTGTAGGCATTTTAGTAAAAAATGTTTTATAACACATCATTTTGATGTTTGATTTTATACTCCAACTTGGCTTTTTTGGCATGATGCATTTTAAGTGTCTGGCTTGAAGTGTTTTTGGG

mRNA sequence

ATGGATAGGGTTTCTGAGAAGGAGAAATCAAGCAAGCGTTCCCGAGAAGAACGCGACCGAGACCCTTATTTGTCCCAGGAAATGGATGGGACATCTTCAATTGCTGGGAGAAGTGGAAATCTCTCTCTTGATGCTTTAGCGAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAGTTGGCTGAGAAGTTGAAGAAAATTCCCCTGATGAAGAAGGCTAAAGTAGCAGGTAGCTCAGTGTTGAAACCAGAGGAGAAAGCTAAAGCAGCAGGTAGTGTATTAGGGCCATCGCCACCTACAAATGTTGCCACAGCCCTTTCTTCTGCGGCATCATCAAGTTCGTTGACCTTACCTGCTGCCAATGCACTTGGTGGTGGTATTAATGTTCCGGCTGGCCTTACCTCTATACCCCATTTTGAGGCTGTCAAACGTGCACAGGAGCTTGCTGCCAGGATGGGATTTCGCCAGGATCCAGAGTTTGCTCCTCTCATAAATTTGTTTCCAGGGAATATAGCAGCGGATGTTGCTGTTCCACAGAAGCCAACCAAGGCCCCTGTTCTTCGTCTTGATGCACTTGGCAGGGAAATAGACGAACAAGGAAATGTGGTCAATATAACCAAACCTAGCAACCTTAGCACTCTAAAGGTTAACATCAACAAGCAGAAAAAGGACGCATTTCAAATTCTTAAACCTGAGCTTGATGTGGATCCCGATTCAAATCCTCATTACGATGAGAGGATGGGTATAAATAAAACTAAATTGTTGAGGCCAAAGAGGATGAGTTTCCAGTTTGTGGAGGAAGGGAAATGGTCTAAGGAGGCCGAGACCATAAAATTGAGGAGTAAATTTGGAGAGGCACAAGCCAAAGAACGAAAGGAGAAGCAGGCCCAATTGGCCAAGGCAAAGGCTGCACCTGATATAAATCCGAATTTGATCGAGGTATCAGAGAGAGTTATAGTGAAGGAAAAAACGAAAGATCCAATTCCTGAAATTGAGTGGTGGATGACATTTCCTGGAAGTAGAATGCGTGAAATTAAGATGTTTGGGAATATAGTATCTTTGTGCTTTGGGCCAAAACGAGCATGGCGGGATGTCCCTCTTTTGCATTTTGGCACATACGACGGCGTGGGAGATGGTTTTGTGGCCGATGATAAAATAAGGAAGGATAAGATTATGATATATGTGGAGCATCCTCGTCCAATTGAACCTCCTGCTGAGCCAGCTCCTCCACCTCCTCAACCCCTAAAGCTAACAAAGAAGGAGCAGAAAAAACTCCGGACACAGCGTCGTCTTGCAAAAGAGAAAGACAGACAGGAGATGATTAGACAAGGCCTGATAGAACCACCCAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCAGAAGCAACCCAAGATCCTACTAAACTCGAGAAAGAGATTCGTGCTGCAGCTGCTGAGAGGGAACAGGCTCACATAGATAGAAATATTGCCCGTAAACTTACCCCTGCAGAACGTCGTGAGAAGAAAGAACGGAAACTCTTTGACGATACAAATTCACTGGAGACAATCGTGTCTGTTTACAAGATCAATGATTTATCACACCCACAGGCCCGGTTTAAAGTCGATGTTAATGCAAGGGAGAACCGTTTGACTGGATGTGCTGTGATATGTGATGGCATCAGTGTTCTGGTTGTTGAAGGGGGAAGCAAATCCATCAAGAGGTATGGGAAGCTTATGCTTAGGCGTATAAATTGGGCTGCTTCTGTGAAGGAGGACGAAGAGGAGGACGAAAACGACGACAAGCCTGTTAACAAATGTTCATTGGTATGGCAAGGAAATGTTGCCAAATCTAGCTTCAATAAATTTTTTATCCAGGAGTGCATGACGGAGGCAGCTGCTAGGAAGATTTTTGCTGATGCTGGTGTTGGTCACTATTGGGATCTTGCCGTTAACTTTTCCGATGATCAAATATAA

Coding sequence (CDS)

ATGGATAGGGTTTCTGAGAAGGAGAAATCAAGCAAGCGTTCCCGAGAAGAACGCGACCGAGACCCTTATTTGTCCCAGGAAATGGATGGGACATCTTCAATTGCTGGGAGAAGTGGAAATCTCTCTCTTGATGCTTTAGCGAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAGTTGGCTGAGAAGTTGAAGAAAATTCCCCTGATGAAGAAGGCTAAAGTAGCAGGTAGCTCAGTGTTGAAACCAGAGGAGAAAGCTAAAGCAGCAGGTAGTGTATTAGGGCCATCGCCACCTACAAATGTTGCCACAGCCCTTTCTTCTGCGGCATCATCAAGTTCGTTGACCTTACCTGCTGCCAATGCACTTGGTGGTGGTATTAATGTTCCGGCTGGCCTTACCTCTATACCCCATTTTGAGGCTGTCAAACGTGCACAGGAGCTTGCTGCCAGGATGGGATTTCGCCAGGATCCAGAGTTTGCTCCTCTCATAAATTTGTTTCCAGGGAATATAGCAGCGGATGTTGCTGTTCCACAGAAGCCAACCAAGGCCCCTGTTCTTCGTCTTGATGCACTTGGCAGGGAAATAGACGAACAAGGAAATGTGGTCAATATAACCAAACCTAGCAACCTTAGCACTCTAAAGGTTAACATCAACAAGCAGAAAAAGGACGCATTTCAAATTCTTAAACCTGAGCTTGATGTGGATCCCGATTCAAATCCTCATTACGATGAGAGGATGGGTATAAATAAAACTAAATTGTTGAGGCCAAAGAGGATGAGTTTCCAGTTTGTGGAGGAAGGGAAATGGTCTAAGGAGGCCGAGACCATAAAATTGAGGAGTAAATTTGGAGAGGCACAAGCCAAAGAACGAAAGGAGAAGCAGGCCCAATTGGCCAAGGCAAAGGCTGCACCTGATATAAATCCGAATTTGATCGAGGTATCAGAGAGAGTTATAGTGAAGGAAAAAACGAAAGATCCAATTCCTGAAATTGAGTGGTGGATGACATTTCCTGGAAGTAGAATGCGTGAAATTAAGATGTTTGGGAATATAGTATCTTTGTGCTTTGGGCCAAAACGAGCATGGCGGGATGTCCCTCTTTTGCATTTTGGCACATACGACGGCGTGGGAGATGGTTTTGTGGCCGATGATAAAATAAGGAAGGATAAGATTATGATATATGTGGAGCATCCTCGTCCAATTGAACCTCCTGCTGAGCCAGCTCCTCCACCTCCTCAACCCCTAAAGCTAACAAAGAAGGAGCAGAAAAAACTCCGGACACAGCGTCGTCTTGCAAAAGAGAAAGACAGACAGGAGATGATTAGACAAGGCCTGATAGAACCACCCAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCAGAAGCAACCCAAGATCCTACTAAACTCGAGAAAGAGATTCGTGCTGCAGCTGCTGAGAGGGAACAGGCTCACATAGATAGAAATATTGCCCGTAAACTTACCCCTGCAGAACGTCGTGAGAAGAAAGAACGGAAACTCTTTGACGATACAAATTCACTGGAGACAATCGTGTCTGTTTACAAGATCAATGATTTATCACACCCACAGGCCCGGTTTAAAGTCGATGTTAATGCAAGGGAGAACCGTTTGACTGGATGTGCTGTGATATGTGATGGCATCAGTGTTCTGGTTGTTGAAGGGGGAAGCAAATCCATCAAGAGGTATGGGAAGCTTATGCTTAGGCGTATAAATTGGGCTGCTTCTGTGAAGGAGGACGAAGAGGAGGACGAAAACGACGACAAGCCTGTTAACAAATGTTCATTGGTATGGCAAGGAAATGTTGCCAAATCTAGCTTCAATAAATTTTTTATCCAGGAGTGCATGACGGAGGCAGCTGCTAGGAAGATTTTTGCTGATGCTGGTGTTGGTCACTATTGGGATCTTGCCGTTAACTTTTCCGATGATCAAATATAA

Protein sequence

MDRVSEKEKSSKRSREERDRDPYLSQEMDGTSSIAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKAKVAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWMTFPGSRMREIKMFGNIVSLCFGPKRAWRDVPLLHFGTYDGVGDGFVADDKIRKDKIMIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEEDENDDKPVNKCSLVWQGNVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI

Homology

[Close]

BLAST of Spg009730 vs. NCBI nr
Match: XP_022139032.1 (protein RDM16 isoform X3 [Momordica charantia])

HSP 1 Score: 1029.2 bits (2660), Expect = 1.5e-296
Identity = 552/636 (86.79%), Postives = 572/636 (89.94%), Query Frame = 0


Query: 22  PYLSQEMDGTSSIAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKVAGSS 81
           P+LS   DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   +  A SS
Sbjct: 35  PFLS-STDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSS 94

Query: 82  VLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAA-NALGGGINVPAGLTSIPH 141
           V+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPAA N  GGGINVPAGLTSIPH
Sbjct: 95  VVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPH 154

Query: 142 FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDE 201
           FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGREIDE
Sbjct: 155 FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDE 214

Query: 202 QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPK 261
           QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKLLRPK
Sbjct: 215 QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPK 274

Query: 262 RMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERV 321
           RM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEVSERV
Sbjct: 275 RMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERV 334

Query: 322 IVKEKTKDPIPEIEWWMTFPGSRMREIKMFGNIVSLCFGPKRAWRDVPLLHFGTYDGVGD 381
           IVKEKTK+PIPEIEWW                             DV LLH GTYD VGD
Sbjct: 335 IVKEKTKEPIPEIEWW-----------------------------DVSLLHSGTYDDVGD 394

Query: 382 GFVADDKIRKDKIMIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQ 441
           GFVA+DKIRKDKI IYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQ
Sbjct: 395 GFVANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQ 454

Query: 442 EMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLT 501
           EMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLT
Sbjct: 455 EMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLT 514

Query: 502 PAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGIS 561
           PAERREKKERKLFDD NSLE  VSVYKI DLSHPQARFKVDVNARENRLTGCAVICDGIS
Sbjct: 515 PAERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGIS 574

Query: 562 VLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEEDENDDKPVNKCSLVWQGNVAKSSFNK 621
           VLVVEGGSKSIKRYGKLMLRRINWAASVKE+EE DE+DDKPVNKCSLVWQG+VAKSSFNK
Sbjct: 575 VLVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNK 634

Query: 622 FFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 654
           FFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 635 FFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 640

[Close]

BLAST of Spg009730 vs. NCBI nr
Match: XP_022139033.1 (protein RDM16 isoform X4 [Momordica charantia])

HSP 1 Score: 1029.2 bits (2660), Expect = 1.5e-296
Identity = 552/636 (86.79%), Postives = 572/636 (89.94%), Query Frame = 0


Query: 22  PYLSQEMDGTSSIAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKVAGSS 81
           P+LS   DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   +  A SS
Sbjct: 25  PFLS-STDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSS 84

Query: 82  VLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAA-NALGGGINVPAGLTSIPH 141
           V+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPAA N  GGGINVPAGLTSIPH
Sbjct: 85  VVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPH 144

Query: 142 FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDE 201
           FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGREIDE
Sbjct: 145 FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDE 204

Query: 202 QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPK 261
           QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKLLRPK
Sbjct: 205 QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPK 264

Query: 262 RMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERV 321
           RM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEVSERV
Sbjct: 265 RMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERV 324

Query: 322 IVKEKTKDPIPEIEWWMTFPGSRMREIKMFGNIVSLCFGPKRAWRDVPLLHFGTYDGVGD 381
           IVKEKTK+PIPEIEWW                             DV LLH GTYD VGD
Sbjct: 325 IVKEKTKEPIPEIEWW-----------------------------DVSLLHSGTYDDVGD 384

Query: 382 GFVADDKIRKDKIMIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQ 441
           GFVA+DKIRKDKI IYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQ
Sbjct: 385 GFVANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQ 444

Query: 442 EMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLT 501
           EMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLT
Sbjct: 445 EMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLT 504

Query: 502 PAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGIS 561
           PAERREKKERKLFDD NSLE  VSVYKI DLSHPQARFKVDVNARENRLTGCAVICDGIS
Sbjct: 505 PAERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGIS 564

Query: 562 VLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEEDENDDKPVNKCSLVWQGNVAKSSFNK 621
           VLVVEGGSKSIKRYGKLMLRRINWAASVKE+EE DE+DDKPVNKCSLVWQG+VAKSSFNK
Sbjct: 565 VLVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNK 624

Query: 622 FFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 654
           FFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 625 FFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 630

[Close]

BLAST of Spg009730 vs. NCBI nr
Match: XP_022139031.1 (protein RDM16 isoform X2 [Momordica charantia])

HSP 1 Score: 1026.5 bits (2653), Expect = 9.7e-296
Identity = 550/640 (85.94%), Postives = 571/640 (89.22%), Query Frame = 0


Query: 18  RDRDPYLSQEMDGTSSIAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKV 77
           R  + +     DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   +  
Sbjct: 317 RSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSS 376

Query: 78  AGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAA-NALGGGINVPAGLT 137
           A SSV+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPAA N  GGGINVPAGLT
Sbjct: 377 ASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLT 436

Query: 138 SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGR 197
           SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGR
Sbjct: 437 SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGR 496

Query: 198 EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKL 257
           EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKL
Sbjct: 497 EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKL 556

Query: 258 LRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEV 317
           LRPKRM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEV
Sbjct: 557 LRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEV 616

Query: 318 SERVIVKEKTKDPIPEIEWWMTFPGSRMREIKMFGNIVSLCFGPKRAWRDVPLLHFGTYD 377
           SERVIVKEKTK+PIPEIEWW                             DV LLH GTYD
Sbjct: 617 SERVIVKEKTKEPIPEIEWW-----------------------------DVSLLHSGTYD 676

Query: 378 GVGDGFVADDKIRKDKIMIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKE 437
            VGDGFVA+DKIRKDKI IYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKE
Sbjct: 677 DVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKE 736

Query: 438 KDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIA 497
           KDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIA
Sbjct: 737 KDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIA 796

Query: 498 RKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVIC 557
           RKLTPAERREKKERKLFDD NSLE  VSVYKI DLSHPQARFKVDVNARENRLTGCAVIC
Sbjct: 797 RKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVIC 856

Query: 558 DGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEEDENDDKPVNKCSLVWQGNVAKS 617
           DGISVLVVEGGSKSIKRYGKLMLRRINWAASVKE+EE DE+DDKPVNKCSLVWQG+VAKS
Sbjct: 857 DGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKS 916

Query: 618 SFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 654
           SFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 917 SFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 927

[Close]

BLAST of Spg009730 vs. NCBI nr
Match: XP_022139030.1 (protein RDM16 isoform X1 [Momordica charantia])

HSP 1 Score: 1026.5 bits (2653), Expect = 9.7e-296
Identity = 550/640 (85.94%), Postives = 571/640 (89.22%), Query Frame = 0


Query: 18  RDRDPYLSQEMDGTSSIAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKV 77
           R  + +     DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   +  
Sbjct: 323 RSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSS 382

Query: 78  AGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAA-NALGGGINVPAGLT 137
           A SSV+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPAA N  GGGINVPAGLT
Sbjct: 383 ASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLT 442

Query: 138 SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGR 197
           SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGR
Sbjct: 443 SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGR 502

Query: 198 EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKL 257
           EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKL
Sbjct: 503 EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKL 562

Query: 258 LRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEV 317
           LRPKRM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEV
Sbjct: 563 LRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEV 622

Query: 318 SERVIVKEKTKDPIPEIEWWMTFPGSRMREIKMFGNIVSLCFGPKRAWRDVPLLHFGTYD 377
           SERVIVKEKTK+PIPEIEWW                             DV LLH GTYD
Sbjct: 623 SERVIVKEKTKEPIPEIEWW-----------------------------DVSLLHSGTYD 682

Query: 378 GVGDGFVADDKIRKDKIMIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKE 437
            VGDGFVA+DKIRKDKI IYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKE
Sbjct: 683 DVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKE 742

Query: 438 KDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIA 497
           KDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIA
Sbjct: 743 KDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIA 802

Query: 498 RKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVIC 557
           RKLTPAERREKKERKLFDD NSLE  VSVYKI DLSHPQARFKVDVNARENRLTGCAVIC
Sbjct: 803 RKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVIC 862

Query: 558 DGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEEDENDDKPVNKCSLVWQGNVAKS 617
           DGISVLVVEGGSKSIKRYGKLMLRRINWAASVKE+EE DE+DDKPVNKCSLVWQG+VAKS
Sbjct: 863 DGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKS 922

Query: 618 SFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 654
           SFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 923 SFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 933

[Close]

BLAST of Spg009730 vs. NCBI nr
Match: KAG7030755.1 (Protein RDM16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1020.0 bits (2636), Expect = 9.1e-294
Identity = 549/639 (85.92%), Postives = 571/639 (89.36%), Query Frame = 0


Query: 18  RDRDPYLSQEMDGTSSIAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKV 77
           R  + +     DGTSS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   +  
Sbjct: 307 RSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGWSSS 366

Query: 78  AGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAANALGGGINVPAGLTS 137
           A SS +K EEKAK AG +LG S  TNV T  S+  +SSS TLPAANALGGGINVPA LTS
Sbjct: 367 ASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVASSSSTLPAANALGGGINVPASLTS 426

Query: 138 IPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGRE 197
           IPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGN+A DVAV QKP+KAPVLRLDALGRE
Sbjct: 427 IPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRLDALGRE 486

Query: 198 IDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLL 257
           IDEQGNVVN+TKPS+LSTLKVNINKQKKDAFQILKPELDVDP+SNPHYDERMGINKTKLL
Sbjct: 487 IDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGINKTKLL 546

Query: 258 RPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVS 317
           RPKRMSF FVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEVS
Sbjct: 547 RPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVS 606

Query: 318 ERVIVKEKTKDPIPEIEWWMTFPGSRMREIKMFGNIVSLCFGPKRAWRDVPLLHFGTYDG 377
           ERV VKEKTK+PIPEIEWW                             DVPLLH GTY+ 
Sbjct: 607 ERV-VKEKTKEPIPEIEWW-----------------------------DVPLLHSGTYEH 666

Query: 378 VGDGFVADDKIRKDKIMIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEK 437
           VGDGFVADDKIRKDKI IYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEK
Sbjct: 667 VGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEK 726

Query: 438 DRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIAR 497
           DRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIAR
Sbjct: 727 DRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIAR 786

Query: 498 KLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICD 557
           KLTPAERREKKERKLF+DTNSLETIVSVYKINDLSHPQARFKVDVNARENRL+GCAVICD
Sbjct: 787 KLTPAERREKKERKLFEDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLSGCAVICD 846

Query: 558 GISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEEDENDDKPVNKCSLVWQGNVAKSS 617
            ISVLVVEGGSKSIKRYGKLML+RINWAASVKE+EEEDENDDKPVNKCSLVWQG+VAKSS
Sbjct: 847 NISVLVVEGGSKSIKRYGKLMLKRINWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSS 906

Query: 618 FNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 654
           F+KF IQECMTEAAARKIFADAGVGHYWDLAVNFSDD I
Sbjct: 907 FHKFSIQECMTEAAARKIFADAGVGHYWDLAVNFSDDLI 915

[Close]

BLAST of Spg009730 vs. ExPASy Swiss-Prot
Match: Q9C7E7 (Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1)

HSP 1 Score: 697.6 bits (1799), Expect = 1.4e-199
Identity = 395/654 (60.40%), Postives = 474/654 (72.48%), Query Frame = 0


Query: 10  SSKRSREERDRDPYLSQEMDGTSSIAGR--------SGNLSLDA---LAKAKKALQMQKE 69
           SS  + +E       S E+ G SS  GR        S NL LD+    AKA+KALQ+QK 
Sbjct: 184 SSISTTDENKASVVRSHEVPGKSSTDGRPLSTAGKSSANLPLDSSALAAKARKALQLQKG 243

Query: 70  LAEKLKKIPLMKKAKVAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPA 129
           LA++LK +PL+KKA            K  + GS     PP+    A+S+  S +S TLP 
Sbjct: 244 LADRLKNLPLLKKA-----------TKPTSEGSPHTRVPPSTTTPAVSTGTSFAS-TLPH 303

Query: 130 ANALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQ 189
                      AG  SI + EAVKRAQELAA MGF QD EFAP+INLFPG   +D+ V Q
Sbjct: 304 TGL--------AGFGSIANIEAVKRAQELAANMGFHQDREFAPVINLFPGQAPSDMTVAQ 363

Query: 190 KPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDS 249
           +P K PVLR+DALGREIDE GNV+++TKPSNLSTLKVNINK+KKDAFQILKP+L+ D   
Sbjct: 364 RPEKPPVLRVDALGREIDEHGNVISVTKPSNLSTLKVNINKKKKDAFQILKPQLEADLKE 423

Query: 250 NPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLA 309
           NP++D RMGI++ K+LRPKRMSFQFVEEGKW+++AE +K +S FGEA+AKE K KQAQLA
Sbjct: 424 NPYFDTRMGIDEKKILRPKRMSFQFVEEGKWTRDAENLKFKSHFGEAKAKELKVKQAQLA 483

Query: 310 KAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWMTFPGSRMREIKMFGNIVSLCFGPK 369
           KA    DINPNLIEVSERV  KEK K+PIP++EWW                         
Sbjct: 484 KAN--DDINPNLIEVSERVPRKEKPKEPIPDVEWW------------------------- 543

Query: 370 RAWRDVPLLHFGTYDGVGDGFVADDKIRKDKIMIYVEHPRPIEPPAEPAPPPPQPLKLTK 429
               D  +L  G Y  + DG + +  ++ +K+  Y+EHPRPIEPPAE APPPPQPLKLTK
Sbjct: 544 ----DANVLTNGEYGEITDGTITESHLKIEKLTHYIEHPRPIEPPAEAAPPPPQPLKLTK 603

Query: 430 KEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRA 489
           KEQKKLRTQRRLAKEK++QEMIRQGL+EPPK KVKMSNLMKVLGSEATQDPTKLEKEIR 
Sbjct: 604 KEQKKLRTQRRLAKEKEKQEMIRQGLLEPPKAKVKMSNLMKVLGSEATQDPTKLEKEIRT 663

Query: 490 AAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVD 549
           AAAEREQAH DRN ARKLTPAE+REKKERKLFDD  ++ETIVSVYKI  LSHP+ RFKV+
Sbjct: 664 AAAEREQAHTDRNAARKLTPAEKREKKERKLFDDPTTVETIVSVYKIKKLSHPKTRFKVE 723

Query: 550 VNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINW-AASVKEDEEEDENDDK 609
           +NARENRLTGC+V+ D +SV+VVEG SK+IKRYGKLM++RINW  A  KE  E++E +  
Sbjct: 724 MNARENRLTGCSVMTDEMSVVVVEGKSKAIKRYGKLMMKRINWEEAERKEGNEDEEEEVN 783

Query: 610 PVNKCSLVWQGNVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDD 652
             NKC LVWQG++ K SF++F + EC+TE+ A+K+F DAGV HYWDLAVN+SDD
Sbjct: 784 GGNKCWLVWQGSIGKPSFHRFHVHECVTESTAKKVFMDAGVVHYWDLAVNYSDD 786

[Close]

BLAST of Spg009730 vs. ExPASy Swiss-Prot
Match: Q5ZJ85 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Gallus gallus OX=9031 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.3e-65
Identity = 218/669 (32.59%), Postives = 338/669 (50.52%), Query Frame = 0


Query: 6   EKEKSSKRSREERDRDPYLSQEMDGTSSIAGRSGNLSLDALAKAKKALQMQKELAEKLKK 65
           E+ +SS+ S+   DR+    +E+     + G    +S ++    K+ +   +E+ ++ + 
Sbjct: 71  EEGRSSRHSKSNSDRN--RKREL---KDVFGDDSEVSKESSGVKKRRIPRFEEVEDEPEV 130

Query: 66  IP--------LMKKAKV---AGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL 125
           IP        ++ K ++     ++  + EE+ K    +  P+P   +      ++SS S 
Sbjct: 131 IPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKI------SSSSQSE 190

Query: 126 TLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARM--------GFRQDPEFAPLINLF 185
            LP  N +       A        E  ++A EL AR+        G   +     L NL 
Sbjct: 191 RLPIGNTVQPS---QAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLH 250

Query: 186 PGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF- 245
              IA      +  TK   L LD  GR +D  G  + +T    + TLK NI   K++ F 
Sbjct: 251 AMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFK 310

Query: 246 QILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEA 305
           Q LK +   D +SN ++D R+ I  T   R KR +F+F E+GK+ K A+  +LR+K   A
Sbjct: 311 QQLKEKPSEDMESNTYFDLRVSI--TPAQRQKR-TFKFHEKGKFEKIAQ--RLRTK---A 370

Query: 306 QAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWMTFPGSRMREIK 365
           Q K+ + + +Q A+ K     +  L  ++ +   KE  +  IPEIEWW ++      ++K
Sbjct: 371 QLKKLQAEISQAAR-KTGIHTSTKLALITPK---KELKEGEIPEIEWWDSYIIPNGLDLK 430

Query: 366 MFGNIVSLCFGPKRAWRDVPLLHFGTYDGVGDGFVADDKIRKDKIMIYVEHPRPIEPPAE 425
                                           G  +  K     I   VEHP  + PP +
Sbjct: 431 --------------------------------GGTSSKKDEYFGITNLVEHPAQLNPPVD 490

Query: 426 PAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEA 485
              P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SNLM+VLG+EA
Sbjct: 491 SDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEA 550

Query: 486 TQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKI 545
            QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK +KL +D  S    ++VY++
Sbjct: 551 VQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKAKKIKKLKEDV-SQGVHIAVYRV 610

Query: 546 NDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASV 605
            +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML RI W    
Sbjct: 611 RNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHRIKWDEQT 670

Query: 606 -----KEDEEEDENDDKPVNKCSLVWQGNVAKSSFNKFFIQECMTEAAARKIFADAGVGH 650
                ++D+E DE   K  NKCSLVW+G     SF +   ++C TE  AR+ F   G  H
Sbjct: 671 SNTKGEDDDESDEESVKKTNKCSLVWEGTAKDRSFGEMKFKQCPTENMAREHFKKHGAEH 678

[Close]

BLAST of Spg009730 vs. ExPASy Swiss-Prot
Match: O43395 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens OX=9606 GN=PRPF3 PE=1 SV=2)

HSP 1 Score: 243.4 bits (620), Expect = 7.0e-63
Identity = 213/670 (31.79%), Postives = 331/670 (49.40%), Query Frame = 0


Query: 6   EKEKSSKRSREERDRDPYLSQEMDGTSSIAGRSGNLSLDALAKAKKALQMQKELAEKLKK 65
           E+ +SS+ S+   DR    S++ +    + G    +S ++    K+ +   +E+ E+ + 
Sbjct: 71  EEGRSSRHSKSSSDR----SRKRE-LKEVFGDDSEISKESSGVKKRRIPRFEEVEEEPEV 130

Query: 66  IP--------LMKKAKV---AGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL 125
           IP        ++ K ++     ++  + EE+ K    +  P+P         + +SS   
Sbjct: 131 IPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQP------KTPSSSQPE 190

Query: 126 TLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARM--------GFRQDPEFAPLINLF 185
            LP  N +       A        E  ++A EL AR+        G   +     L NL 
Sbjct: 191 RLPIGNTIQPS---QAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLH 250

Query: 186 PGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF- 245
              IA      +  TK   L LD  GR +D  G  + +T    + TLK NI   K++ F 
Sbjct: 251 AMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFK 310

Query: 246 QILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEA 305
           Q LK +   D +SN  +D R+ I  +   + +R +F+F ++GK+ K A+ ++ +++  + 
Sbjct: 311 QQLKEKPSEDMESNTFFDPRVSIAPS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKL 370

Query: 306 QAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWMTFPGSRMREIK 365
           QA      +   A  K     +  L  ++ +   KE  +  IPEIEWW ++         
Sbjct: 371 QA------EISQAARKTGIHTSTRLALIAPK---KELKEGDIPEIEWWDSY--------- 430

Query: 366 MFGNIVSLC-FGPKRAWRDVPLLHFGTYDGVGDGFVADDKIRKDKIMIYVEHPRPIEPPA 425
           +  N   L    PKR            Y G+ +                VEHP  + PP 
Sbjct: 431 IIPNGFDLTEENPKRE----------DYFGITN---------------LVEHPAQLNPPV 490

Query: 426 EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSE 485
           +   P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SNLM+VLG+E
Sbjct: 491 DNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTE 550

Query: 486 ATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYK 545
           A QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK +KL +D  S    +SVY+
Sbjct: 551 AVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDI-SQGVHISVYR 610

Query: 546 INDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAAS 605
           + +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML RI W   
Sbjct: 611 VRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHRIKWDEQ 670

Query: 606 VK-----EDEEEDENDDKPVNKCSLVWQGNVAKSSFNKFFIQECMTEAAARKIFADAGVG 650
                  +DEE DE   K  NKC LVW+G     SF +   ++C TE  AR+ F   G  
Sbjct: 671 TSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMAREHFKKHGAE 677

[Close]

BLAST of Spg009730 vs. ExPASy Swiss-Prot
Match: Q5R5F1 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Pongo abelii OX=9601 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 7.0e-63
Identity = 213/670 (31.79%), Postives = 331/670 (49.40%), Query Frame = 0


Query: 6   EKEKSSKRSREERDRDPYLSQEMDGTSSIAGRSGNLSLDALAKAKKALQMQKELAEKLKK 65
           E+ +SS+ S+   DR    S++ +    + G    +S ++    K+ +   +E+ E+ + 
Sbjct: 71  EEGRSSRHSKSSSDR----SRKRE-LKEVFGDDSEISKESSGVKKRRIPRFEEVEEEPEV 130

Query: 66  IP--------LMKKAKV---AGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL 125
           IP        ++ K ++     ++  + EE+ K    +  P+P         + +SS   
Sbjct: 131 IPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQP------KTPSSSQPE 190

Query: 126 TLPAANALGGGINVPAGLTSIPHFEAVKRAQELAARM--------GFRQDPEFAPLINLF 185
            LP  N +       A        E  ++A EL AR+        G   +     L NL 
Sbjct: 191 RLPIGNTIQPS---QAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLH 250

Query: 186 PGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAF- 245
              IA      +  TK   L LD  GR +D  G  + +T    + TLK NI   K++ F 
Sbjct: 251 AMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFR 310

Query: 246 QILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEA 305
           Q LK +   D +SN  +D R+ I  +   + +R +F+F ++GK+ K A+ ++ +++  + 
Sbjct: 311 QQLKEKPSEDMESNTFFDPRVSIAPS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKL 370

Query: 306 QAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWMTFPGSRMREIK 365
           QA      +   A  K     +  L  ++ +   KE  +  IPEIEWW ++         
Sbjct: 371 QA------EISQAARKTGIHTSTRLALIAPK---KELKEGDIPEIEWWDSY--------- 430

Query: 366 MFGNIVSLC-FGPKRAWRDVPLLHFGTYDGVGDGFVADDKIRKDKIMIYVEHPRPIEPPA 425
           +  N   L    PKR            Y G+ +                VEHP  + PP 
Sbjct: 431 IIPNGFDLTEENPKRE----------DYFGITN---------------LVEHPAQLNPPV 490

Query: 426 EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSE 485
           +   P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SNLM+VLG+E
Sbjct: 491 DNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTE 550

Query: 486 ATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYK 545
           A QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK +KL +D  S    +SVY+
Sbjct: 551 AVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDI-SQGVHISVYR 610

Query: 546 INDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAAS 605
           + +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML RI W   
Sbjct: 611 VRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHRIKWDEQ 670

Query: 606 VK-----EDEEEDENDDKPVNKCSLVWQGNVAKSSFNKFFIQECMTEAAARKIFADAGVG 650
                  +DEE DE   K  NKC LVW+G     SF +   ++C TE  AR+ F   G  
Sbjct: 671 TSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMAREHFKKHGAE 677

[Close]

BLAST of Spg009730 vs. ExPASy Swiss-Prot
Match: Q2KIA6 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Bos taurus OX=9913 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 9.1e-63
Identity = 212/673 (31.50%), Postives = 336/673 (49.93%), Query Frame = 0


Query: 6   EKEKSSKRSREERDRDPYLSQEMDGTSSIAGRSGNLSLDALAKAKKALQMQKELAEKLKK 65
           E+ +SS+ S+   DR    S++ D    + G    +S ++    K+ +   +E+ E+ + 
Sbjct: 71  EEGRSSRHSKSSSDR----SRKRD-LKEVFGDDSEISKESSGVKKRRIPRFEEVEEEPEV 130

Query: 66  IP--------LMKKAKV---AGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSL 125
           IP        ++ K ++     ++  + EE+ K    +  P+P         + +SS   
Sbjct: 131 IPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQP------KTPSSSQPE 190

Query: 126 TLPAANALGGGINVPAGLTSIPHFEAVKRAQ-----------ELAARMGFRQDPEFAPLI 185
            LP  N +      P+   +  + +A+++A+           +LA + G   +     L 
Sbjct: 191 RLPIGNTI-----QPSQAATFMN-DAIEKARKAAELQASIQAQLALKPGLIGNANMVGLA 250

Query: 186 NLFPGNIAADVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKD 245
           NL    IA      +  TK   L LD  GR +D  G  + +T    + TLK NI   K++
Sbjct: 251 NLHAMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELT--HRMPTLKANIRAVKRE 310

Query: 246 AF-QILKPELDVDPDSNPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKF 305
            F Q LK +   D +SN  +D R+ I  +   + +R +F+F ++GK+ K A+ ++ +++ 
Sbjct: 311 QFKQQLKEKPSEDMESNTFFDPRVSIAPS---QRQRRTFKFHDKGKFEKIAQRLRTKAQL 370

Query: 306 GEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWMTFPGSRMR 365
            + QA      +   A  K     +  L  ++ +   KE  +  IPEIEWW ++      
Sbjct: 371 EKLQA------EISQAARKTGIHTSTRLALIAPK---KELKEGDIPEIEWWDSY------ 430

Query: 366 EIKMFGNIVSLC-FGPKRAWRDVPLLHFGTYDGVGDGFVADDKIRKDKIMIYVEHPRPIE 425
              +  N   L    PKR            Y G+ +                VEHP  + 
Sbjct: 431 ---IIPNGFDLTEENPKRE----------DYFGITN---------------LVEHPAQLN 490

Query: 426 PPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVL 485
           PP +   P    + LTKKEQKKLR Q R   +K+ QE +R GL+ PP+PKV++SNLM+VL
Sbjct: 491 PPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVL 550

Query: 486 GSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVS 545
           G+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK +KL +D  S    +S
Sbjct: 551 GTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDI-SQGVHIS 610

Query: 546 VYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINW 605
           VY++ +LS+P  +FK++ NA +  LTG  V+   ++V+VVEGG K+ K++ +LML RI W
Sbjct: 611 VYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHRIKW 670

Query: 606 AASVK-----EDEEEDENDDKPVNKCSLVWQGNVAKSSFNKFFIQECMTEAAARKIFADA 650
                     +DEE DE   K  NKC LVW+G     SF +   ++C TE  AR+ F   
Sbjct: 671 DEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMAREHFKKH 677

[Close]

BLAST of Spg009730 vs. ExPASy TrEMBL
Match: A0A6J1CCW0 (protein RDM16 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1029.2 bits (2660), Expect = 7.2e-297
Identity = 552/636 (86.79%), Postives = 572/636 (89.94%), Query Frame = 0


Query: 22  PYLSQEMDGTSSIAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKVAGSS 81
           P+LS   DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   +  A SS
Sbjct: 35  PFLS-STDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSS 94

Query: 82  VLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAA-NALGGGINVPAGLTSIPH 141
           V+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPAA N  GGGINVPAGLTSIPH
Sbjct: 95  VVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPH 154

Query: 142 FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDE 201
           FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGREIDE
Sbjct: 155 FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDE 214

Query: 202 QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPK 261
           QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKLLRPK
Sbjct: 215 QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPK 274

Query: 262 RMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERV 321
           RM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEVSERV
Sbjct: 275 RMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERV 334

Query: 322 IVKEKTKDPIPEIEWWMTFPGSRMREIKMFGNIVSLCFGPKRAWRDVPLLHFGTYDGVGD 381
           IVKEKTK+PIPEIEWW                             DV LLH GTYD VGD
Sbjct: 335 IVKEKTKEPIPEIEWW-----------------------------DVSLLHSGTYDDVGD 394

Query: 382 GFVADDKIRKDKIMIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQ 441
           GFVA+DKIRKDKI IYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQ
Sbjct: 395 GFVANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQ 454

Query: 442 EMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLT 501
           EMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLT
Sbjct: 455 EMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLT 514

Query: 502 PAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGIS 561
           PAERREKKERKLFDD NSLE  VSVYKI DLSHPQARFKVDVNARENRLTGCAVICDGIS
Sbjct: 515 PAERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGIS 574

Query: 562 VLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEEDENDDKPVNKCSLVWQGNVAKSSFNK 621
           VLVVEGGSKSIKRYGKLMLRRINWAASVKE+EE DE+DDKPVNKCSLVWQG+VAKSSFNK
Sbjct: 575 VLVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNK 634

Query: 622 FFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 654
           FFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 635 FFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 640

[Close]

BLAST of Spg009730 vs. ExPASy TrEMBL
Match: A0A6J1CEQ9 (protein RDM16 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1029.2 bits (2660), Expect = 7.2e-297
Identity = 552/636 (86.79%), Postives = 572/636 (89.94%), Query Frame = 0


Query: 22  PYLSQEMDGTSSIAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKVAGSS 81
           P+LS   DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   +  A SS
Sbjct: 25  PFLS-STDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSSASSS 84

Query: 82  VLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAA-NALGGGINVPAGLTSIPH 141
           V+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPAA N  GGGINVPAGLTSIPH
Sbjct: 85  VVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLTSIPH 144

Query: 142 FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGREIDE 201
           FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGREIDE
Sbjct: 145 FEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGREIDE 204

Query: 202 QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLLRPK 261
           QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKLLRPK
Sbjct: 205 QGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKLLRPK 264

Query: 262 RMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVSERV 321
           RM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEVSERV
Sbjct: 265 RMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERV 324

Query: 322 IVKEKTKDPIPEIEWWMTFPGSRMREIKMFGNIVSLCFGPKRAWRDVPLLHFGTYDGVGD 381
           IVKEKTK+PIPEIEWW                             DV LLH GTYD VGD
Sbjct: 325 IVKEKTKEPIPEIEWW-----------------------------DVSLLHSGTYDDVGD 384

Query: 382 GFVADDKIRKDKIMIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQ 441
           GFVA+DKIRKDKI IYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQ
Sbjct: 385 GFVANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQ 444

Query: 442 EMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLT 501
           EMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLT
Sbjct: 445 EMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLT 504

Query: 502 PAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGIS 561
           PAERREKKERKLFDD NSLE  VSVYKI DLSHPQARFKVDVNARENRLTGCAVICDGIS
Sbjct: 505 PAERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGIS 564

Query: 562 VLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEEDENDDKPVNKCSLVWQGNVAKSSFNK 621
           VLVVEGGSKSIKRYGKLMLRRINWAASVKE+EE DE+DDKPVNKCSLVWQG+VAKSSFNK
Sbjct: 565 VLVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNK 624

Query: 622 FFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 654
           FFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 625 FFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 630

[Close]

BLAST of Spg009730 vs. ExPASy TrEMBL
Match: A0A6J1CB57 (protein RDM16 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1026.5 bits (2653), Expect = 4.7e-296
Identity = 550/640 (85.94%), Postives = 571/640 (89.22%), Query Frame = 0


Query: 18  RDRDPYLSQEMDGTSSIAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKV 77
           R  + +     DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   +  
Sbjct: 323 RSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSS 382

Query: 78  AGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAA-NALGGGINVPAGLT 137
           A SSV+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPAA N  GGGINVPAGLT
Sbjct: 383 ASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLT 442

Query: 138 SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGR 197
           SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGR
Sbjct: 443 SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGR 502

Query: 198 EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKL 257
           EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKL
Sbjct: 503 EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKL 562

Query: 258 LRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEV 317
           LRPKRM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEV
Sbjct: 563 LRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEV 622

Query: 318 SERVIVKEKTKDPIPEIEWWMTFPGSRMREIKMFGNIVSLCFGPKRAWRDVPLLHFGTYD 377
           SERVIVKEKTK+PIPEIEWW                             DV LLH GTYD
Sbjct: 623 SERVIVKEKTKEPIPEIEWW-----------------------------DVSLLHSGTYD 682

Query: 378 GVGDGFVADDKIRKDKIMIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKE 437
            VGDGFVA+DKIRKDKI IYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKE
Sbjct: 683 DVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKE 742

Query: 438 KDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIA 497
           KDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIA
Sbjct: 743 KDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIA 802

Query: 498 RKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVIC 557
           RKLTPAERREKKERKLFDD NSLE  VSVYKI DLSHPQARFKVDVNARENRLTGCAVIC
Sbjct: 803 RKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVIC 862

Query: 558 DGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEEDENDDKPVNKCSLVWQGNVAKS 617
           DGISVLVVEGGSKSIKRYGKLMLRRINWAASVKE+EE DE+DDKPVNKCSLVWQG+VAKS
Sbjct: 863 DGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKS 922

Query: 618 SFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 654
           SFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 923 SFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 933

[Close]

BLAST of Spg009730 vs. ExPASy TrEMBL
Match: A0A6J1CBF9 (protein RDM16 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1026.5 bits (2653), Expect = 4.7e-296
Identity = 550/640 (85.94%), Postives = 571/640 (89.22%), Query Frame = 0


Query: 18  RDRDPYLSQEMDGTSSIAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKV 77
           R  + +     DG SS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   +  
Sbjct: 317 RSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGGSSS 376

Query: 78  AGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAA-NALGGGINVPAGLT 137
           A SSV+K E+K+K AG VLGPSP TN+ T +S+  +SSS TLPAA N  GGGINVPAGLT
Sbjct: 377 ASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVASSSSTLPAATNTHGGGINVPAGLT 436

Query: 138 SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGR 197
           SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIA DVAVPQKP KAPVLRLDALGR
Sbjct: 437 SIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIATDVAVPQKPVKAPVLRLDALGR 496

Query: 198 EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKL 257
           EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPEL+VDP+SNPH+DERMGINKTKL
Sbjct: 497 EIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELEVDPESNPHFDERMGINKTKL 556

Query: 258 LRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEV 317
           LRPKRM+FQFVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEV
Sbjct: 557 LRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEV 616

Query: 318 SERVIVKEKTKDPIPEIEWWMTFPGSRMREIKMFGNIVSLCFGPKRAWRDVPLLHFGTYD 377
           SERVIVKEKTK+PIPEIEWW                             DV LLH GTYD
Sbjct: 617 SERVIVKEKTKEPIPEIEWW-----------------------------DVSLLHSGTYD 676

Query: 378 GVGDGFVADDKIRKDKIMIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKE 437
            VGDGFVA+DKIRKDKI IYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKE
Sbjct: 677 DVGDGFVANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKE 736

Query: 438 KDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIA 497
           KDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIA
Sbjct: 737 KDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIA 796

Query: 498 RKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVIC 557
           RKLTPAERREKKERKLFDD NSLE  VSVYKI DLSHPQARFKVDVNARENRLTGCAVIC
Sbjct: 797 RKLTPAERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVIC 856

Query: 558 DGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEEDENDDKPVNKCSLVWQGNVAKS 617
           DGISVLVVEGGSKSIKRYGKLMLRRINWAASVKE+EE DE+DDKPVNKCSLVWQG+VAKS
Sbjct: 857 DGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKS 916

Query: 618 SFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 654
           SFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI
Sbjct: 917 SFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 927

[Close]

BLAST of Spg009730 vs. ExPASy TrEMBL
Match: A0A6J1ILJ1 (protein RDM16-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477318 PE=4 SV=1)

HSP 1 Score: 1018.1 bits (2631), Expect = 1.7e-293
Identity = 547/639 (85.60%), Postives = 571/639 (89.36%), Query Frame = 0


Query: 18  RDRDPYLSQEMDGTSSIAGRSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK---AKV 77
           R  + +     DGTSS AG+SGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK   +  
Sbjct: 307 RSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGWSSS 366

Query: 78  AGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPAANALGGGINVPAGLTS 137
           A SS +K EEKAK AG +LG +  TNV T LS+  +SS  TLPAANALGGGINVPA LTS
Sbjct: 367 ASSSAVKSEEKAKLAGGLLGLTATTNVTTTLSAGVASSLSTLPAANALGGGINVPASLTS 426

Query: 138 IPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVLRLDALGRE 197
           IPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGN+A DVAV QKP+KAPVLRLDALGRE
Sbjct: 427 IPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRLDALGRE 486

Query: 198 IDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSNPHYDERMGINKTKLL 257
           IDEQGNVVN+TKPS+LSTLKVNINKQKKDAFQILKPELDVDP+SNPHYDERMGINKTKLL
Sbjct: 487 IDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGINKTKLL 546

Query: 258 RPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLAKAKAAPDINPNLIEVS 317
           RPKRMSF FVEEGKWSKEAETIKLRSKFGEAQAKER+EKQAQLAKAKAAPDINPNLIEVS
Sbjct: 547 RPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVS 606

Query: 318 ERVIVKEKTKDPIPEIEWWMTFPGSRMREIKMFGNIVSLCFGPKRAWRDVPLLHFGTYDG 377
           ERV VK+KTK+PIPEIEWW                             DVPLLH GTY+ 
Sbjct: 607 ERV-VKDKTKEPIPEIEWW-----------------------------DVPLLHSGTYEH 666

Query: 378 VGDGFVADDKIRKDKIMIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEK 437
           VGDGFVADDKIRKDKI IYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEK
Sbjct: 667 VGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEK 726

Query: 438 DRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIAR 497
           DRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIAR
Sbjct: 727 DRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIAR 786

Query: 498 KLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLTGCAVICD 557
           KLTPAERREKKERKLF+DTNSLETIVSVYKINDLSHPQARFKVDVNARENRL+GCAVICD
Sbjct: 787 KLTPAERREKKERKLFEDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLSGCAVICD 846

Query: 558 GISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEEDENDDKPVNKCSLVWQGNVAKSS 617
            ISVLVVEGGSKSIKRYGKLML+RINWAASVKE+EEEDENDDKPVNKCSLVWQG+VAKSS
Sbjct: 847 NISVLVVEGGSKSIKRYGKLMLKRINWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSS 906

Query: 618 FNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDDQI 654
           F+KF IQECMTEAAARKIFADAGVGHYWDLAVNFSDD I
Sbjct: 907 FHKFSIQECMTEAAARKIFADAGVGHYWDLAVNFSDDLI 915

[Close]

BLAST of Spg009730 vs. TAIR 10
Match: AT1G28060.1 (Pre-mRNA-splicing factor 3 )

HSP 1 Score: 697.6 bits (1799), Expect = 9.6e-201
Identity = 395/654 (60.40%), Postives = 474/654 (72.48%), Query Frame = 0


Query: 10  SSKRSREERDRDPYLSQEMDGTSSIAGR--------SGNLSLDA---LAKAKKALQMQKE 69
           SS  + +E       S E+ G SS  GR        S NL LD+    AKA+KALQ+QK 
Sbjct: 184 SSISTTDENKASVVRSHEVPGKSSTDGRPLSTAGKSSANLPLDSSALAAKARKALQLQKG 243

Query: 70  LAEKLKKIPLMKKAKVAGSSVLKPEEKAKAAGSVLGPSPPTNVATALSSAASSSSLTLPA 129
           LA++LK +PL+KKA            K  + GS     PP+    A+S+  S +S TLP 
Sbjct: 244 LADRLKNLPLLKKA-----------TKPTSEGSPHTRVPPSTTTPAVSTGTSFAS-TLPH 303

Query: 130 ANALGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQ 189
                      AG  SI + EAVKRAQELAA MGF QD EFAP+INLFPG   +D+ V Q
Sbjct: 304 TGL--------AGFGSIANIEAVKRAQELAANMGFHQDREFAPVINLFPGQAPSDMTVAQ 363

Query: 190 KPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDS 249
           +P K PVLR+DALGREIDE GNV+++TKPSNLSTLKVNINK+KKDAFQILKP+L+ D   
Sbjct: 364 RPEKPPVLRVDALGREIDEHGNVISVTKPSNLSTLKVNINKKKKDAFQILKPQLEADLKE 423

Query: 250 NPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLA 309
           NP++D RMGI++ K+LRPKRMSFQFVEEGKW+++AE +K +S FGEA+AKE K KQAQLA
Sbjct: 424 NPYFDTRMGIDEKKILRPKRMSFQFVEEGKWTRDAENLKFKSHFGEAKAKELKVKQAQLA 483

Query: 310 KAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWMTFPGSRMREIKMFGNIVSLCFGPK 369
           KA    DINPNLIEVSERV  KEK K+PIP++EWW                         
Sbjct: 484 KAN--DDINPNLIEVSERVPRKEKPKEPIPDVEWW------------------------- 543

Query: 370 RAWRDVPLLHFGTYDGVGDGFVADDKIRKDKIMIYVEHPRPIEPPAEPAPPPPQPLKLTK 429
               D  +L  G Y  + DG + +  ++ +K+  Y+EHPRPIEPPAE APPPPQPLKLTK
Sbjct: 544 ----DANVLTNGEYGEITDGTITESHLKIEKLTHYIEHPRPIEPPAEAAPPPPQPLKLTK 603

Query: 430 KEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRA 489
           KEQKKLRTQRRLAKEK++QEMIRQGL+EPPK KVKMSNLMKVLGSEATQDPTKLEKEIR 
Sbjct: 604 KEQKKLRTQRRLAKEKEKQEMIRQGLLEPPKAKVKMSNLMKVLGSEATQDPTKLEKEIRT 663

Query: 490 AAAEREQAHIDRNIARKLTPAERREKKERKLFDDTNSLETIVSVYKINDLSHPQARFKVD 549
           AAAEREQAH DRN ARKLTPAE+REKKERKLFDD  ++ETIVSVYKI  LSHP+ RFKV+
Sbjct: 664 AAAEREQAHTDRNAARKLTPAEKREKKERKLFDDPTTVETIVSVYKIKKLSHPKTRFKVE 723

Query: 550 VNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINW-AASVKEDEEEDENDDK 609
           +NARENRLTGC+V+ D +SV+VVEG SK+IKRYGKLM++RINW  A  KE  E++E +  
Sbjct: 724 MNARENRLTGCSVMTDEMSVVVVEGKSKAIKRYGKLMMKRINWEEAERKEGNEDEEEEVN 783

Query: 610 PVNKCSLVWQGNVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNFSDD 652
             NKC LVWQG++ K SF++F + EC+TE+ A+K+F DAGV HYWDLAVN+SDD
Sbjct: 784 GGNKCWLVWQGSIGKPSFHRFHVHECVTESTAKKVFMDAGVVHYWDLAVNYSDD 786

[Close]

BLAST of Spg009730 vs. TAIR 10
Match: AT3G55930.1 (Pre-mRNA-splicing factor 3 )

HSP 1 Score: 331.3 bits (848), Expect = 1.8e-90
Identity = 215/472 (45.55%), Postives = 274/472 (58.05%), Query Frame = 0


Query: 179 KPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDS 238
           K TK  VLR+DALGREIDE GNV+++TKP N STL VNI                   D+
Sbjct: 91  KQTKGFVLRVDALGREIDEHGNVISVTKPINHSTLMVNIR------------------DN 150

Query: 239 NPHYDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETIKLRSKFGEAQAKERKEKQAQLA 298
            PH               +++S                K+ S++ +A             
Sbjct: 151 VPH---------------RKLS----------------KILSEWWDA------------- 210

Query: 299 KAKAAPDINPNLIEVSERVIVKEKTKDPIPEIEWWMTFPGSRMREIKMFGNIVSLCFGPK 358
                                K  T D I E+                       C    
Sbjct: 211 ---------------------KILTDDTINELS----------------------C---- 270

Query: 359 RAWRDVPLLHFGTYDGVGDGFVADDKIRKDKIMIYVEHPRPIEPPAEPAPPPPQPLKLTK 418
               D  +L   T        + ++ +       ++EHP PIEPPAE A PPPQPLK+TK
Sbjct: 271 ----DPNILIMDT--------ITENHLNMKVFNCHIEHPFPIEPPAEAASPPPQPLKMTK 330

Query: 419 KEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRA 478
           +E+KKLRT RR+AKE +++EMI QG +EP K KVKMSNLMKV  SEATQ+PTKLEKEIR 
Sbjct: 331 EERKKLRTLRRVAKEMEKREMISQGRVEPQKSKVKMSNLMKVRASEATQNPTKLEKEIRT 390

Query: 479 AAAEREQAHIDRNIARKLTPAERREKKERKLF-DDTNSLETIVSVYKIN-DLSHPQARFK 538
            AAEREQAH+DRN+ARKLTPAE+REKKERKLF D T  +ETIVSVYKIN  LS P+ RFK
Sbjct: 391 EAAEREQAHMDRNVARKLTPAEKREKKERKLFGDPTTVVETIVSVYKINKKLSDPKTRFK 437

Query: 539 VDVNARENRLTGCAVICDGISVLVVEGGSKSIKRYGKLMLRRINWAASVKEDEEEDENDD 598
           V +NA++N LTG +V+ DG+SV+VVEG  K+I RY KLML+RINW  + K+++EE+    
Sbjct: 451 VRMNAKQNILTGFSVMMDGMSVVVVEGKRKAINRYEKLMLKRINWEEAEKKEDEEENGG- 437

Query: 599 KPVNKCSLVWQGNVAKSSFNKFFIQECMTEAAARKIFADAGVGHYWDLAVNF 649
              NKC LVWQG+V K SF++F +QEC+T++ A+K+F DAGV HYWDLA+N+
Sbjct: 511 ---NKCCLVWQGSVEKPSFHRFHVQECLTKSDAKKVFNDAGVAHYWDLALNY 437

[Close]

BLAST of Spg009730 vs. TAIR 10
Match: AT3G56790.1 (RNA splicing factor-related )

HSP 1 Score: 79.0 bits (193), Expect = 1.6e-14
Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 410 PPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSE-ATQD 469
           PPQP KLTKKE+KKL+T RR+AKEK++Q+MIRQ L EP K KVK+SNLMKVL SE ATQD
Sbjct: 144 PPQPFKLTKKEEKKLQTLRRVAKEKEKQKMIRQALFEPQKSKVKLSNLMKVLASELATQD 203

HSP 2 Score: 63.5 bits (153), Expect = 7.0e-10
Identity = 47/105 (44.76%), Postives = 53/105 (50.48%), Query Frame = 0


Query: 127 NVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNIAADVAVPQKPTKAPVL 186
           ++ +  TS    EAVKR QEL                       A D AV  K TK   L
Sbjct: 69  SIASDTTSSQILEAVKRFQEL-----------------------AIDTAVAHKQTKGFFL 128

Query: 187 RLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQ-ILKP 231
           R+D LGREIDE G+V+      NLSTL VN NK KKD FQ ILKP
Sbjct: 129 RVDVLGREIDEYGHVI------NLSTLMVNNNKHKKDVFQNILKP 144

The following BLAST results are available for this feature:

BLAST of Spg009730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139032.1	1.5e-296	86.79	protein RDM16 isoform X3 [Momordica charantia]	[more]
XP_022139033.1	1.5e-296	86.79	protein RDM16 isoform X4 [Momordica charantia]	[more]
XP_022139031.1	9.7e-296	85.94	protein RDM16 isoform X2 [Momordica charantia]	[more]
XP_022139030.1	9.7e-296	85.94	protein RDM16 isoform X1 [Momordica charantia]	[more]
KAG7030755.1	9.1e-294	85.92	Protein RDM16, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Spg009730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7E7	1.4e-199	60.40	Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1	[more]
Q5ZJ85	3.3e-65	32.59	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Gallus gallus OX=9031 GN=PRPF3 PE=...	[more]
O43395	7.0e-63	31.79	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens OX=9606 GN=PRPF3 PE=1...	[more]
Q5R5F1	7.0e-63	31.79	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Pongo abelii OX=9601 GN=PRPF3 PE=2...	[more]
Q2KIA6	9.1e-63	31.50	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Bos taurus OX=9913 GN=PRPF3 PE=2 S...	[more]

BLAST of Spg009730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CCW0	7.2e-297	86.79	protein RDM16 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1CEQ9	7.2e-297	86.79	protein RDM16 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1CB57	4.7e-296	85.94	protein RDM16 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1CBF9	4.7e-296	85.94	protein RDM16 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1ILJ1	1.7e-293	85.60	protein RDM16-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477318 PE=4 S...	[more]

BLAST of Spg009730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28060.1	9.6e-201	60.40	Pre-mRNA-splicing factor 3	[more]
AT3G55930.1	1.8e-90	45.55	Pre-mRNA-splicing factor 3	[more]
AT3G56790.1	1.6e-14	75.00	RNA splicing factor-related	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 43..66
None	No IPR available	COILS	Coil	Coil	coord: 414..436
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 399..415
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 398..422
None	No IPR available	PANTHER	PTHR14212:SF2	SUBFAMILY NOT NAMED	coord: 27..334 coord: 358..652
IPR010541	Domain of unknown function DUF1115	PFAM	PF06544	DUF1115	coord: 522..645 e-value: 1.8E-41 score: 141.7
IPR013881	Pre-mRNA-splicing factor 3	PFAM	PF08572	PRP3	coord: 239..497 e-value: 1.3E-58 score: 198.3
IPR027104	U4/U6 small nuclear ribonucleoprotein Prp3	PANTHER	PTHR14212	U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED	coord: 358..652 coord: 27..334

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg009730.1	Spg009730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex