Spg009714 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg009714
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Copper transport protein like
Location	scaffold7: 5140763 .. 5142739 (+)
RNA-Seq Expression	Spg009714
Synteny	Spg009714

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGCAGAGATCGGCGAGGGCGAATTTTCCAAGACTTTTTCGTTAGTTTCTCTCCCGAATTTCTGTAATCTGTAGCCATGTCTCAGGTATGCTACGAATTTCTCGGTTTTTTGTTCTTGTATGCAATTGTTGAAGTTTTGTTTTCGGTTTTTCATCCTTATCTTTCGTTTTTTCGCTCTCTCTTTGTCTCGTATGATTTGGAGATCGAAGATACGTCAGTTCGTTCTTTTTAAACTTTAAATCTGCTGCTCGGAGCACGAATCGTTGATCTAAACTGAATTATTAGGATTTTTTTTTAAAATCATGCAATCCATGATTTATCGGGTATTTTTATGCACCAAGAGAAGATTTAAAAGCTTCGAAGATGAAGGATGAAATAACTACTCACGCGAGTGTTGATATTTGCATAATTTTTACTAATTTTGCGATTCGGGCCTTTTAGCATTTTGTCTTTTTTCTTTTCTTCTTCTTCCCTGCGGTTTTATGCATTGTTTTTTCATTTGATGTGAATCTGGCACAAGTGACGGAAACGACACTAATCGAGCCAATGAGGTCTAAGTTTGAGAGAGCGCCATAGAAGCTCGTCGTTAGTATCGCATATTGATCAATTTATTGGTTAATAATTGGTCAATCAATCACTAAGGAAGCTTTATGCTGATCATATATTGAGTTCTGGTTATTGATCGAATGTTTTTCCGATTTGCCAAATTAGAATGTTCTGCCCTATGATGTGTTTTTTAATTATTAATTTATGTTATTCTTGGGAGCTGGAGTTGTTGAAATTTCAGTGATAATATTTATGGATATAACCGATGAACAAGTTCCCATTAGATGGAATTGGATAAGTTAATTTCTGTTGAAGATTTTGATAAAGGACCGTTGATATTAAACACTCTTCTCTTCCTTATAGCTGAGTTCTTTGTTTTCATCTAAATAATACAGTTTGGAGTTTGTTTTTGTGCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGCGTTGGGGCCGTCAAAAGGGTATTGGGAAAGCTGGAAGGTTTGTTATTCCTTCACTAAATCTTGGTTCTCTCACTATGTGCTTGAATTTGCTCTACCTTTGTGTACTAGAGCGTGAGAGTTAAATCTCAAAGTTTCTTTCCATACTGTATTTTTCAGATCCATGTTTCAACATTTTATTTTCTGTTGAACCATATGAAAATCATTTTTTGTCTTAATCTGTGAATTCTTGGAAGTATAAACCATTTTTGCTCAAATTCTCAAGACATATTCTGCTCGACCAGGGGTCGAACTCAACAAACCATATGCACCCTTGGTTAAATTTATTGCAAGTTTACTTCTCTTTTATGTCTAAGGCTTTGAATGGACTTCATAGATCTGAAAGATCTCGTACATCTTGCCTGTGAGCTGTGCTGTATTAAAATGAAATCTTGAATGAATGTCAATATATATAAAATCTATCAGTATTGCAAAATCAAGTATCCTTTATTCTAATCTCTTAGACATTTGATATTACCAATTGAATATGAACATCTTGAACATTTAACTAGTTCCTACTTAAAATGCTTGGCTTCAATGTTCAGGAGTCGAGACATTTGACATCGATATAGATGCACAAAAGGTGACTGTGAAAGGTAACGTGGAGCGCGACGTAGTTTTCCAAACCGTCTCGAAAACTGGGAAGAAGACTGCCTACTGGGAAGACGAAGCCCCAGCAGCACCAGCACCAGCACCAGCTGAAGCAGAAGCTAAACCTGCCGAGACTGTGGCTGCTGCTTAAAGTTTACTCCTATTTACTAAATGGAAATTTTCTGTTCAATGCATAAGGTCTTTACTTCGTGAAGCTCATAATAATGTAATAATACGTGAACTTGGCTATTTAGTCTGTAATATTTTGATTGAAGTGCCTCTTTTATGGCCTTCTACATTGAAACTTAACTATGGTGGTCTATAGATATGTTTCTGTTTTCGCCTCAA

mRNA sequence

ATGTCTCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGCGTTGGGGCCGTCAAAAGGGTATTGGGAAAGCTGGAAGGAGTCGAGACATTTGACATCGATATAGATGCACAAAAGGTGACTGTGAAAGGTAACGTGGAGCGCGACGTAGTTTTCCAAACCGTCTCGAAAACTGGGAAGAAGACTGCCTACTGGGAAGACGAAGCCCCAGCAGCACCAGCACCAGCACCAGCTGAAGCAGAAGCTAAACCTGCCGAGACTGTGGCTGCTGCTTAA

Coding sequence (CDS)

ATGTCTCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGCGTTGGGGCCGTCAAAAGGGTATTGGGAAAGCTGGAAGGAGTCGAGACATTTGACATCGATATAGATGCACAAAAGGTGACTGTGAAAGGTAACGTGGAGCGCGACGTAGTTTTCCAAACCGTCTCGAAAACTGGGAAGAAGACTGCCTACTGGGAAGACGAAGCCCCAGCAGCACCAGCACCAGCACCAGCTGAAGCAGAAGCTAAACCTGCCGAGACTGTGGCTGCTGCTTAA

Protein sequence

MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAPAPAPAEAEAKPAETVAAA

Homology

[Close]

BLAST of Spg009714 vs. NCBI nr
Match: XP_008446769.1 (PREDICTED: copper transport protein ATX1-like [Cucumis melo] >KAA0034661.1 copper transport protein ATX1-like [Cucumis melo var. makuwa] >TYK09212.1 copper transport protein ATX1-like [Cucumis melo var. makuwa])

HSP 1 Score: 159.1 bits (401), Expect = 1.9e-35
Identity = 88/95 (92.63%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGV+TFDIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVDTFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDEAPAAPA--PAPAEAEAKPAETVAAA 94
          GKKTAYWED+A AAPA  PAPAEAEAKPAE +AAA
Sbjct: 61 GKKTAYWEDDASAAPAATPAPAEAEAKPAEPLAAA 95

[Close]

BLAST of Spg009714 vs. NCBI nr
Match: XP_004150491.1 (copper transport protein ATX1 [Cucumis sativus] >XP_031745275.1 copper transport protein ATX1-like [Cucumis sativus] >KAE8645958.1 hypothetical protein Csa_018219 [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 9.3e-35
Identity = 86/94 (91.49%), Postives = 90/94 (95.74%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVET+DIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETYDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDEAPAAPA--PAPAEAEAKPAETVAA 93
          GKKTAYWE++A AAPA  PAPAEAEAKPAE +AA
Sbjct: 61 GKKTAYWEEDASAAPAATPAPAEAEAKPAEPLAA 94

[Close]

BLAST of Spg009714 vs. NCBI nr
Match: XP_038893429.1 (copper transport protein ATX1-like [Benincasa hispida])

HSP 1 Score: 156.4 bits (394), Expect = 1.2e-34
Identity = 88/101 (87.13%), Postives = 91/101 (90.10%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVE FDIDIDAQKVTVKGNVER+VVFQTVSKT
Sbjct: 1   MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVEAFDIDIDAQKVTVKGNVEREVVFQTVSKT 60

Query: 61  GKKTAYWEDEAPA--------APAPAPAEAEAKPAETVAAA 94
           GKKTAYWE++APA        A APAPAEAEAKPAETVAAA
Sbjct: 61  GKKTAYWEEDAPAASAKEATPAAAPAPAEAEAKPAETVAAA 101

[Close]

BLAST of Spg009714 vs. NCBI nr
Match: KAE8648832.1 (hypothetical protein Csa_008416 [Cucumis sativus])

HSP 1 Score: 151.8 bits (382), Expect = 3.0e-33
Identity = 83/91 (91.21%), Postives = 87/91 (95.60%), Query Frame = 0


Query: 4   TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKK 63
           TTVLKVAMSCQGCVGAVKRVLGKLEGVET+DIDIDAQKVTVKGNVERDVVFQTVSKTGKK
Sbjct: 22  TTVLKVAMSCQGCVGAVKRVLGKLEGVETYDIDIDAQKVTVKGNVERDVVFQTVSKTGKK 81

Query: 64  TAYWEDEAPAAPA--PAPAEAEAKPAETVAA 93
           TAYWE++A AAPA  PAPAEAEAKPAE +AA
Sbjct: 82  TAYWEEDASAAPAATPAPAEAEAKPAEPLAA 112

[Close]

BLAST of Spg009714 vs. NCBI nr
Match: XP_022968572.1 (copper transport protein ATX1-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 149.8 bits (377), Expect = 1.1e-32
Identity = 87/108 (80.56%), Postives = 90/108 (83.33%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ FDIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61  GKKTAYWEDEAP---------AAPAP-------APAEAEAKPAETVAA 93
           GKKTAYWEDEAP         AAPAP        PAEAEAKPAE+VAA
Sbjct: 61  GKKTAYWEDEAPAPAPVAAPAAAPAPEAAPAAAPPAEAEAKPAESVAA 108

[Close]

BLAST of Spg009714 vs. ExPASy Swiss-Prot
Match: O82089 (Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 4.1e-25
Identity = 66/90 (73.33%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
          M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNVE + VFQTVSKT
Sbjct: 1  MAQTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKT 60

Query: 61 GKKTAYWEDEAPAAPAPAPAEAEAKPAETV 91
          GKKT+YW  EA A P    AEA+ K  ETV
Sbjct: 61 GKKTSYWPVEAEAEP---KAEADPK-VETV 86

[Close]

BLAST of Spg009714 vs. ExPASy Swiss-Prot
Match: Q94BT9 (Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-24
Identity = 56/76 (73.68%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
          MSQT VL+VAM+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNV+ D V QTV+KT
Sbjct: 1  MSQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKT 60

Query: 61 GKKTAYWEDEAPAAPA 77
          GKKTA+WE E   A A
Sbjct: 61 GKKTAFWEAEGETAKA 76

[Close]

BLAST of Spg009714 vs. ExPASy Swiss-Prot
Match: B3H6D0 (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.7e-10
Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 7  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAY 66
          L V M C+GC   V+R + KL+GV+T +ID+D QKVTV G V+R+ V + V +TG+   Y
Sbjct: 20 LLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRTAEY 79

Query: 67 W 68
          W
Sbjct: 80 W 80

[Close]

BLAST of Spg009714 vs. ExPASy Swiss-Prot
Match: Q84J88 (Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX=3702 GN=HIPP36 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.4e-09
Identity = 27/64 (42.19%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 4  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKK 63
          T VL+V++ C+GC   +K++L K++GV T +ID+  QKVTV GNVE +++ + + K G+ 
Sbjct: 31 TWVLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRH 90

Query: 64 TAYW 68
             W
Sbjct: 91 AELW 94

[Close]

BLAST of Spg009714 vs. ExPASy Swiss-Prot
Match: F4JZL7 (Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX=3702 GN=HIPP33 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 9.1e-09
Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 3  QTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGK 62
          QT VLKV + C GC   VK++L K+EGV T  ID +  KVTV GNV+  V+ + + K+GK
Sbjct: 10 QTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGK 69

Query: 63 KTAYW 68
              W
Sbjct: 70 HAEIW 74

[Close]

BLAST of Spg009714 vs. ExPASy TrEMBL
Match: A0A5A7SZ31 (Copper transport protein ATX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002050 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 9.1e-36
Identity = 88/95 (92.63%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGV+TFDIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVDTFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDEAPAAPA--PAPAEAEAKPAETVAAA 94
          GKKTAYWED+A AAPA  PAPAEAEAKPAE +AAA
Sbjct: 61 GKKTAYWEDDASAAPAATPAPAEAEAKPAEPLAAA 95

[Close]

BLAST of Spg009714 vs. ExPASy TrEMBL
Match: A0A1S3BFW4 (copper transport protein ATX1-like OS=Cucumis melo OX=3656 GN=LOC103489398 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 9.1e-36
Identity = 88/95 (92.63%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGV+TFDIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVDTFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDEAPAAPA--PAPAEAEAKPAETVAAA 94
          GKKTAYWED+A AAPA  PAPAEAEAKPAE +AAA
Sbjct: 61 GKKTAYWEDDASAAPAATPAPAEAEAKPAEPLAAA 95

[Close]

BLAST of Spg009714 vs. ExPASy TrEMBL
Match: A0A0A0KTF7 (Copper chaperone OS=Cucumis sativus OX=3659 GN=Csa_5G615220 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.5e-35
Identity = 86/94 (91.49%), Postives = 90/94 (95.74%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVET+DIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETYDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDEAPAAPA--PAPAEAEAKPAETVAA 93
          GKKTAYWE++A AAPA  PAPAEAEAKPAE +AA
Sbjct: 61 GKKTAYWEEDASAAPAATPAPAEAEAKPAEPLAA 94

[Close]

BLAST of Spg009714 vs. ExPASy TrEMBL
Match: A0A6J1HTV3 (copper transport protein ATX1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111467756 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 5.5e-33
Identity = 87/108 (80.56%), Postives = 90/108 (83.33%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ FDIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61  GKKTAYWEDEAP---------AAPAP-------APAEAEAKPAETVAA 93
           GKKTAYWEDEAP         AAPAP        PAEAEAKPAE+VAA
Sbjct: 61  GKKTAYWEDEAPAPAPVAAPAAAPAPEAAPAAAPPAEAEAKPAESVAA 108

[Close]

BLAST of Spg009714 vs. ExPASy TrEMBL
Match: A0A6J1HXJ6 (copper transport protein ATX1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467756 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 7.2e-33
Identity = 87/110 (79.09%), Postives = 90/110 (81.82%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ FDIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61  GKKTAYWEDEAP-AAPAPA-----------------PAEAEAKPAETVAA 93
           GKKTAYWEDEAP AAPAP                  PAEAEAKPAE+VAA
Sbjct: 61  GKKTAYWEDEAPAAAPAPVAAPAAAPAPEAAPAAAPPAEAEAKPAESVAA 110

[Close]

BLAST of Spg009714 vs. TAIR 10
Match: AT3G56240.1 (copper chaperone )

HSP 1 Score: 115.2 bits (287), Expect = 2.9e-26
Identity = 66/90 (73.33%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
          M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNVE + VFQTVSKT
Sbjct: 1  MAQTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKT 60

Query: 61 GKKTAYWEDEAPAAPAPAPAEAEAKPAETV 91
          GKKT+YW  EA A P    AEA+ K  ETV
Sbjct: 61 GKKTSYWPVEAEAEP---KAEADPK-VETV 86

[Close]

BLAST of Spg009714 vs. TAIR 10
Match: AT1G66240.1 (homolog of anti-oxidant 1 )

HSP 1 Score: 113.2 bits (282), Expect = 1.1e-25
Identity = 56/76 (73.68%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQT VL+VAM+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNV+ D V QTV+KT
Sbjct: 31  MSQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKT 90

Query: 61  GKKTAYWEDEAPAAPA 77
           GKKTA+WE E   A A
Sbjct: 91  GKKTAFWEAEGETAKA 106

[Close]

BLAST of Spg009714 vs. TAIR 10
Match: AT1G66240.2 (homolog of anti-oxidant 1 )

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-21
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 11 MSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDE 70
          M+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNV+ D V QTV+KTGKKTA+WE E
Sbjct: 1  MTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTGKKTAFWEAE 60

Query: 71 APAAPA 77
             A A
Sbjct: 61 GETAKA 66

[Close]

BLAST of Spg009714 vs. TAIR 10
Match: AT3G56891.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.2e-11
Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 7  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAY 66
          L V M C+GC   V+R + KL+GV+T +ID+D QKVTV G V+R+ V + V +TG+   Y
Sbjct: 20 LLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRTAEY 79

Query: 67 W 68
          W
Sbjct: 80 W 80

[Close]

BLAST of Spg009714 vs. TAIR 10
Match: AT5G27690.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 1.7e-10
Identity = 27/64 (42.19%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 4  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKTGKK 63
          T VL+V++ C+GC   +K++L K++GV T +ID+  QKVTV GNVE +++ + + K G+ 
Sbjct: 31 TWVLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRH 90

Query: 64 TAYW 68
             W
Sbjct: 91 AELW 94

The following BLAST results are available for this feature:

BLAST of Spg009714 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446769.1	1.9e-35	92.63	PREDICTED: copper transport protein ATX1-like [Cucumis melo] >KAA0034661.1 coppe...	[more]
XP_004150491.1	9.3e-35	91.49	copper transport protein ATX1 [Cucumis sativus] >XP_031745275.1 copper transport...	[more]
XP_038893429.1	1.2e-34	87.13	copper transport protein ATX1-like [Benincasa hispida]	[more]
KAE8648832.1	3.0e-33	91.21	hypothetical protein Csa_008416 [Cucumis sativus]	[more]
XP_022968572.1	1.1e-32	80.56	copper transport protein ATX1-like isoform X3 [Cucurbita maxima]	[more]

BLAST of Spg009714 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82089	4.1e-25	73.33	Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1	[more]
Q94BT9	1.6e-24	73.68	Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2	[more]
B3H6D0	1.7e-10	49.18	Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX...	[more]
Q84J88	2.4e-09	42.19	Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX...	[more]
F4JZL7	9.1e-09	47.69	Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX...	[more]

BLAST of Spg009714 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SZ31	9.1e-36	92.63	Copper transport protein ATX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BFW4	9.1e-36	92.63	copper transport protein ATX1-like OS=Cucumis melo OX=3656 GN=LOC103489398 PE=4 ...	[more]
A0A0A0KTF7	4.5e-35	91.49	Copper chaperone OS=Cucumis sativus OX=3659 GN=Csa_5G615220 PE=4 SV=1	[more]
A0A6J1HTV3	5.5e-33	80.56	copper transport protein ATX1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1HXJ6	7.2e-33	79.09	copper transport protein ATX1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Spg009714 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56240.1	2.9e-26	73.33	copper chaperone	[more]
AT1G66240.1	1.1e-25	73.68	homolog of anti-oxidant 1	[more]
AT1G66240.2	1.3e-21	72.73	homolog of anti-oxidant 1	[more]
AT3G56891.1	1.2e-11	49.18	Heavy metal transport/detoxification superfamily protein	[more]
AT5G27690.1	1.7e-10	42.19	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 7..63 e-value: 2.0E-14 score: 53.7
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 3..66 score: 13.120943
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 11..63 e-value: 6.30456E-12 score: 53.7637
None	No IPR available	GENE3D	3.30.70.100		coord: 1..66 e-value: 1.6E-22 score: 81.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..93
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 1..89
None	No IPR available	PANTHER	PTHR22814:SF310	COPPER TRANSPORT PROTEIN CCH	coord: 1..89
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 2..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg009714.1	Spg009714.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding