Spg009707 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg009707
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	60S ribosomal protein L35
Location	scaffold7: 7528985 .. 7530135 (+)
RNA-Seq Expression	Spg009707
Synteny	Spg009707

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGCGAGAATTAAGGTTCACGAGCTCAGACAGAAGTCGAAGGCGGATCTTTTGACCCAGCTTAAGGACCTCAAGGCGGAGCTTGCTCTTCTCCGAGTCGCTAAGGTCACCGGTGGTGCTCCCAACAAGCTCTCCAAAATGTACTTTGTTCTATCTTTCTACTGATTTCCTTTTTGTGTTTTGTATGTATGTATGTTGATTGGTTTTCTATATTGCGTTTGGGTTTTTGTTGTGATGCTTATGGTGTTTGTTTCGGTGGTTCTTGATTCCAGTAAGGTGGTGAGGTTGTCAATCGCTCAGGTATTGACAGTGATTTCTCAGAAACAGAAGGCGGCTCTGAGGGAAGCTTACAAGAAGAAGAAGCTTTTGCCTCTTGATTTGCGTCCCAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAGCACCAAGTAAGCGCTTTCTTCATTTGAATCTATACATTTTCATATTATTTTTCCTTTCGCTGCTACTATATTTATCTCTGTGCTTAAATTTCTGCTTGTGCACAATGCTGGTTAATTCATAATTTGCTTTCTATGTTGAATGGTTAAGGATTGTATTGTGTGGTATGGTTTTGTTTCCAATTTTAGTGTCGTATTTCCATTGAAGCTTCGTGTTTATAGTATGTGTACAAATTGATTTACCACATTGGCCATTTATTTAACTCTTCTTTGTTTTAGTCAGTCTGGGAATGTCGAGCCCCACTGCAATTTTGAAAGTTAAATGAGACTTAAAAAATTGAATTTAATAGAATGGTGTGGGAAGTAACCTTTAGTAACAAGGATAATGCTCGAAGAATTTGAAGCCCAGCTATTTTCCATCTCTTAGTTTTTACAACACAACCCTCAACTTTTCTGCCTTGTTGAGATTGAGAATATATGTATTTCACATGATAACTCAATTTTTCTATGCTGGGTGTTGATTTTCTTGAATTGTATGTATTGTTTAAGCCATTGCTATTCCCGCTATAAATATTTTGAAGTGCAGTGAACAGTGTAGACTGTCTTTCTAGTTTCTTCCTCATTCTAATTTGACGTTCTTGTACTTTGTTTTACAGGCATCGCTAAAGACCGAAAGACAGAAGAAGAAAGAGATGTACTACCCATTGAGGAAGTACGCCATTAAGGTGTAG

mRNA sequence

GCAGCGAGAATTAAGGTTCACGAGCTCAGACAGAAGTCGAAGGCGGATCTTTTGACCCAGCTTAAGGACCTCAAGGCGGAGCTTGCTCTTCTCCGAGTCGCTAAGGTCACCGGTGGTGCTCCCAACAAGCTCTCCAAAATTAAGGTGGTGAGGTTGTCAATCGCTCAGGTATTGACAGTGATTTCTCAGAAACAGAAGGCGGCTCTGAGGGAAGCTTACAAGAAGAAGAAGCTTTTGCCTCTTGATTTGCGTCCCAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAGCACCAAGCATCGCTAAAGACCGAAAGACAGAAGAAGAAAGAGATGTACTACCCATTGAGGAAGTACGCCATTAAGGTGTAG

Coding sequence (CDS)

GCAGCGAGAATTAAGGTTCACGAGCTCAGACAGAAGTCGAAGGCGGATCTTTTGACCCAGCTTAAGGACCTCAAGGCGGAGCTTGCTCTTCTCCGAGTCGCTAAGGTCACCGGTGGTGCTCCCAACAAGCTCTCCAAAATTAAGGTGGTGAGGTTGTCAATCGCTCAGGTATTGACAGTGATTTCTCAGAAACAGAAGGCGGCTCTGAGGGAAGCTTACAAGAAGAAGAAGCTTTTGCCTCTTGATTTGCGTCCCAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAGCACCAAGCATCGCTAAAGACCGAAAGACAGAAGAAGAAAGAGATGTACTACCCATTGAGGAAGTACGCCATTAAGGTGTAG

Protein sequence

AARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAIKV

Homology

[Close]

BLAST of Spg009707 vs. NCBI nr
Match: XP_022134532.1 (60S ribosomal protein L35 [Momordica charantia])

HSP 1 Score: 214.5 bits (545), Expect = 5.0e-52
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI
Sbjct: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMY+PLRKYAI
Sbjct: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYFPLRKYAI 121

Query: 122 KV 124
           KV
Sbjct: 122 KV 123

[Close]

BLAST of Spg009707 vs. NCBI nr
Match: XP_022939961.1 (60S ribosomal protein L35 [Cucurbita moschata] >XP_022957446.1 60S ribosomal protein L35 [Cucurbita moschata] >XP_022991739.1 60S ribosomal protein L35 [Cucurbita maxima] >XP_022993735.1 60S ribosomal protein L35 [Cucurbita maxima] >XP_023523288.1 60S ribosomal protein L35 [Cucurbita pepo subsp. pepo] >KAG6578726.1 60S ribosomal protein L35, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016256.1 60S ribosomal protein L35 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213.8 bits (543), Expect = 8.5e-52
Identity = 120/122 (98.36%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELRQKSKADLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI
Sbjct: 2   ARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMYYPLRKYAI
Sbjct: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYYPLRKYAI 121

Query: 122 KV 124
           KV
Sbjct: 122 KV 123

[Close]

BLAST of Spg009707 vs. NCBI nr
Match: KAG7031634.1 (60S ribosomal protein L35, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213.8 bits (543), Expect = 8.5e-52
Identity = 120/122 (98.36%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELRQKSKADLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI
Sbjct: 25  ARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 84

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMYYPLRKYAI
Sbjct: 85  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYYPLRKYAI 144

Query: 122 KV 124
           KV
Sbjct: 145 KV 146

[Close]

BLAST of Spg009707 vs. NCBI nr
Match: KAG6601021.1 (Spliceosome-associated protein 130 B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 213.8 bits (543), Expect = 8.5e-52
Identity = 120/122 (98.36%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 2    ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
            ARIKVHELRQKSKADLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI
Sbjct: 1236 ARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 1295

Query: 62   SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
            SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMYYPLRKYAI
Sbjct: 1296 SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYYPLRKYAI 1355

Query: 122  KV 124
            KV
Sbjct: 1356 KV 1357

[Close]

BLAST of Spg009707 vs. NCBI nr
Match: XP_038891782.1 (60S ribosomal protein L35-like [Benincasa hispida])

HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51
Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELRQKSK DLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI
Sbjct: 2   ARIKVHELRQKSKGDLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI
Sbjct: 62  SQKQKSALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121

Query: 122 KV 124
           KV
Sbjct: 122 KV 123

[Close]

BLAST of Spg009707 vs. ExPASy Swiss-Prot
Match: Q9M5L0 (60S ribosomal protein L35 OS=Euphorbia esula OX=3993 GN=RPL35 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 9.8e-51
Identity = 112/122 (91.80%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELRQK+KA+LL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI
Sbjct: 2   ARIKVHELRQKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQK ALREAYK KK LPLDLRPKKTRAIRRRLTKHQ SLKTER+KKKEMY+P+RKYAI
Sbjct: 62  SQKQKLALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQQSLKTEREKKKEMYFPMRKYAI 121

Query: 122 KV 124
           KV
Sbjct: 122 KV 123

[Close]

BLAST of Spg009707 vs. ExPASy Swiss-Prot
Match: O80626 (60S ribosomal protein L35-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35B PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 6.3e-50
Identity = 111/122 (90.98%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELR+KSKADL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVI
Sbjct: 2   ARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVI 61

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYAI
Sbjct: 62  SQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYAI 121

Query: 122 KV 124
           KV
Sbjct: 122 KV 123

[Close]

BLAST of Spg009707 vs. ExPASy Swiss-Prot
Match: Q9SF53 (60S ribosomal protein L35-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35A PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.4e-49
Identity = 110/122 (90.16%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELR+KSK+DL  QLK+LKAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV 
Sbjct: 2   ARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVS 61

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYAI
Sbjct: 62  SQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYAI 121

Query: 122 KV 124
           KV
Sbjct: 122 KV 123

[Close]

BLAST of Spg009707 vs. ExPASy Swiss-Prot
Match: Q9LZ41 (60S ribosomal protein L35-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35D PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.4e-49
Identity = 110/122 (90.16%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELR KSK DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVI
Sbjct: 2   ARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVI 61

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYAI
Sbjct: 62  SQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPVRKYAI 121

Query: 122 KV 124
           KV
Sbjct: 122 KV 123

[Close]

BLAST of Spg009707 vs. ExPASy Swiss-Prot
Match: Q9M3D2 (60S ribosomal protein L35-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35C PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 7.0e-49
Identity = 109/122 (89.34%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELR KSK+DL TQLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV 
Sbjct: 2   ARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVS 61

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKK+MY+P+RKYAI
Sbjct: 62  SQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYAI 121

Query: 122 KV 124
           KV
Sbjct: 122 KV 123

[Close]

BLAST of Spg009707 vs. ExPASy TrEMBL
Match: A0A6J1BZV3 (60S ribosomal protein L35 OS=Momordica charantia OX=3673 GN=LOC111006751 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.4e-52
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI
Sbjct: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMY+PLRKYAI
Sbjct: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYFPLRKYAI 121

Query: 122 KV 124
           KV
Sbjct: 122 KV 123

[Close]

BLAST of Spg009707 vs. ExPASy TrEMBL
Match: A0A6J1JVN4 (60S ribosomal protein L35 OS=Cucurbita maxima OX=3661 GN=LOC111488270 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.1e-52
Identity = 120/122 (98.36%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELRQKSKADLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI
Sbjct: 2   ARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMYYPLRKYAI
Sbjct: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYYPLRKYAI 121

Query: 122 KV 124
           KV
Sbjct: 122 KV 123

[Close]

BLAST of Spg009707 vs. ExPASy TrEMBL
Match: A0A6J1FH81 (60S ribosomal protein L35 OS=Cucurbita moschata OX=3662 GN=LOC111445667 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.1e-52
Identity = 120/122 (98.36%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELRQKSKADLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI
Sbjct: 2   ARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMYYPLRKYAI
Sbjct: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYYPLRKYAI 121

Query: 122 KV 124
           KV
Sbjct: 122 KV 123

[Close]

BLAST of Spg009707 vs. ExPASy TrEMBL
Match: A0A6J1CDN9 (60S ribosomal protein L35-2 OS=Momordica charantia OX=3673 GN=LOC111010277 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 5.4e-52
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELRQKSKADLL QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI
Sbjct: 2   ARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI
Sbjct: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121

Query: 122 KV 124
           KV
Sbjct: 122 KV 123

[Close]

BLAST of Spg009707 vs. ExPASy TrEMBL
Match: A0A6J1FSL2 (60S ribosomal protein L35-like OS=Cucurbita moschata OX=3662 GN=LOC111446919 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 5.4e-52
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI
Sbjct: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASL TERQKKKEMYYPLRKYAI
Sbjct: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLLTERQKKKEMYYPLRKYAI 121

Query: 122 KV 124
           KV
Sbjct: 122 KV 123

[Close]

BLAST of Spg009707 vs. TAIR 10
Match: AT2G39390.1 (Ribosomal L29 family protein )

HSP 1 Score: 198.0 bits (502), Expect = 4.5e-51
Identity = 111/122 (90.98%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELR+KSKADL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVI
Sbjct: 2   ARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVI 61

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYAI
Sbjct: 62  SQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYAI 121

Query: 122 KV 124
           KV
Sbjct: 122 KV 123

[Close]

BLAST of Spg009707 vs. TAIR 10
Match: AT3G09500.1 (Ribosomal L29 family protein )

HSP 1 Score: 196.8 bits (499), Expect = 1.0e-50
Identity = 110/122 (90.16%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELR+KSK+DL  QLK+LKAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTV 
Sbjct: 2   ARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVS 61

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYAI
Sbjct: 62  SQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYAI 121

Query: 122 KV 124
           KV
Sbjct: 122 KV 123

[Close]

BLAST of Spg009707 vs. TAIR 10
Match: AT5G02610.1 (Ribosomal L29 family protein )

HSP 1 Score: 196.1 bits (497), Expect = 1.7e-50
Identity = 110/122 (90.16%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELR KSK DL  QLK+ KAELALLRVAKVTGGAPNKLSKIKVVR SIAQVLTVI
Sbjct: 2   ARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVI 61

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKKEMY+P+RKYAI
Sbjct: 62  SQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPVRKYAI 121

Query: 122 KV 124
           KV
Sbjct: 122 KV 123

[Close]

BLAST of Spg009707 vs. TAIR 10
Match: AT3G55170.1 (Ribosomal L29 family protein )

HSP 1 Score: 194.5 bits (493), Expect = 5.0e-50
Identity = 109/122 (89.34%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELR KSK+DL TQLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV 
Sbjct: 2   ARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVS 61

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKK+MY+P+RKYAI
Sbjct: 62  SQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYAI 121

Query: 122 KV 124
           KV
Sbjct: 122 KV 123

[Close]

BLAST of Spg009707 vs. TAIR 10
Match: AT3G55170.2 (Ribosomal L29 family protein )

HSP 1 Score: 194.5 bits (493), Expect = 5.0e-50
Identity = 109/122 (89.34%), Postives = 116/122 (95.08%), Query Frame = 0


Query: 2   ARIKVHELRQKSKADLLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVI 61
           ARIKVHELR KSK+DL TQLK+LKAELA LRVAKVTGGAPNKLSKIKVVR SIAQVLTV 
Sbjct: 2   ARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVS 61

Query: 62  SQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAI 121
           SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQASLKTER+KKK+MY+P+RKYAI
Sbjct: 62  SQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYAI 121

Query: 122 KV 124
           KV
Sbjct: 122 KV 123

The following BLAST results are available for this feature:

BLAST of Spg009707 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134532.1	5.0e-52	99.18	60S ribosomal protein L35 [Momordica charantia]	[more]
XP_022939961.1	8.5e-52	98.36	60S ribosomal protein L35 [Cucurbita moschata] >XP_022957446.1 60S ribosomal pro...	[more]
KAG7031634.1	8.5e-52	98.36	60S ribosomal protein L35, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6601021.1	8.5e-52	98.36	Spliceosome-associated protein 130 B, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_038891782.1	1.1e-51	98.36	60S ribosomal protein L35-like [Benincasa hispida]	[more]

BLAST of Spg009707 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M5L0	9.8e-51	91.80	60S ribosomal protein L35 OS=Euphorbia esula OX=3993 GN=RPL35 PE=2 SV=1	[more]
O80626	6.3e-50	90.98	60S ribosomal protein L35-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35B PE=2 SV=1	[more]
Q9SF53	1.4e-49	90.16	60S ribosomal protein L35-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35A PE=2 SV=1	[more]
Q9LZ41	2.4e-49	90.16	60S ribosomal protein L35-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35D PE=2 SV=1	[more]
Q9M3D2	7.0e-49	89.34	60S ribosomal protein L35-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35C PE=2 SV=1	[more]

BLAST of Spg009707 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZV3	2.4e-52	99.18	60S ribosomal protein L35 OS=Momordica charantia OX=3673 GN=LOC111006751 PE=3 SV...	[more]
A0A6J1JVN4	4.1e-52	98.36	60S ribosomal protein L35 OS=Cucurbita maxima OX=3661 GN=LOC111488270 PE=3 SV=1	[more]
A0A6J1FH81	4.1e-52	98.36	60S ribosomal protein L35 OS=Cucurbita moschata OX=3662 GN=LOC111445667 PE=3 SV=...	[more]
A0A6J1CDN9	5.4e-52	99.18	60S ribosomal protein L35-2 OS=Momordica charantia OX=3673 GN=LOC111010277 PE=3 ...	[more]
A0A6J1FSL2	5.4e-52	99.18	60S ribosomal protein L35-like OS=Cucurbita moschata OX=3662 GN=LOC111446919 PE=...	[more]

BLAST of Spg009707 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39390.1	4.5e-51	90.98	Ribosomal L29 family protein	[more]
AT3G09500.1	1.0e-50	90.16	Ribosomal L29 family protein	[more]
AT5G02610.1	1.7e-50	90.16	Ribosomal L29 family protein	[more]
AT3G55170.1	5.0e-50	89.34	Ribosomal L29 family protein	[more]
AT3G55170.2	5.0e-50	89.34	Ribosomal L29 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 14..34
None	No IPR available	GENE3D	6.10.250.3450		coord: 78..123 e-value: 3.8E-22 score: 80.2
None	No IPR available	PANTHER	PTHR45722:SF18	60S RIBOSOMAL PROTEIN L35-LIKE	coord: 2..123
None	No IPR available	CDD	cd00427	Ribosomal_L29_HIP	coord: 8..64 e-value: 3.27196E-11 score: 52.4899
IPR001854	Ribosomal protein L29/L35	TIGRFAM	TIGR00012	TIGR00012	coord: 8..64 e-value: 1.1E-18 score: 64.9
IPR001854	Ribosomal protein L29/L35	PFAM	PF00831	Ribosomal_L29	coord: 8..64 e-value: 1.1E-17 score: 63.7
IPR001854	Ribosomal protein L29/L35	HAMAP	MF_00374	Ribosomal_L29	coord: 4..64 score: 12.972131
IPR036049	Ribosomal protein L29/L35 superfamily	GENE3D	1.10.287.310		coord: 1..77 e-value: 9.8E-35 score: 120.8
IPR036049	Ribosomal protein L29/L35 superfamily	SUPERFAMILY	46561	Ribosomal protein L29 (L29p)	coord: 4..65
IPR045059	60S ribosomal protein L35	PANTHER	PTHR45722	60S RIBOSOMAL PROTEIN L35	coord: 2..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg009707.1	Spg009707.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome