Spg009639 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg009639
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDUF674 domain-containing protein
Locationscaffold7: 8460908 .. 8461223 (+)
RNA-Seq ExpressionSpg009639
SyntenySpg009639
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACAAGCTGAGGTGAGATTGAAACTCTTGATGGATTCCAAAGAGCTAGCAGAGAGATCTAATATGGTGATGGACGATCTCACTGTGAACCCCACGTCCACCATTTTATGCATTACCCTTTTGAACAAGTTCAATGTCAAGGAAATCGGGGCTTTGGAAGAGAGAGTTGTTACTTTGGATGTCAACGAGGTCAATTTATTTCTATCCACAAAAACAATATTCATGTTGTATAGTTTATTTTGATATGTATCTAAATTCTAGAAGCAAAATCTTTTAACTTGGTTTTGTTTGGTTTCTTTTGTAGGCGGTGTGA

mRNA sequence

ATGGCACAAGCTGAGGTGAGATTGAAACTCTTGATGGATTCCAAAGAGCTAGCAGAGAGATCTAATATGGTGATGGACGATCTCACTGTGAACCCCACGTCCACCATTTTATGCATTACCCTTTTGAACAAGTTCAATGTCAAGGAAATCGGGGCTTTGGAAGAGAGAGTTGTTACTTTGGATGTCAACGAGGCGGTGTGA

Coding sequence (CDS)

ATGGCACAAGCTGAGGTGAGATTGAAACTCTTGATGGATTCCAAAGAGCTAGCAGAGAGATCTAATATGGTGATGGACGATCTCACTGTGAACCCCACGTCCACCATTTTATGCATTACCCTTTTGAACAAGTTCAATGTCAAGGAAATCGGGGCTTTGGAAGAGAGAGTTGTTACTTTGGATGTCAACGAGGCGGTGTGA

Protein sequence

MAQAEVRLKLLMDSKELAERSNMVMDDLTVNPTSTILCITLLNKFNVKEIGALEERVVTLDVNEAV
Homology
BLAST of Spg009639 vs. NCBI nr
Match: XP_008461735.1 (PREDICTED: uncharacterized protein LOC103500268 [Cucumis melo] >KAA0052182.1 DUF674 domain-containing protein [Cucumis melo var. makuwa] >TYJ97778.1 DUF674 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 3.1e-08
Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = 0

Query: 23  MVMDDLTVNPTSTILCITLLNKFNVKEIGALEERVVTLDVNEAV 67
           MVMDDL+V P STI  ITLLNKFN+KE+GALEE+V+TLDVN+ V
Sbjct: 168 MVMDDLSVKPMSTISSITLLNKFNIKEVGALEEKVITLDVNQGV 211

BLAST of Spg009639 vs. NCBI nr
Match: XP_022138964.1 (uncharacterized protein LOC111010013 [Momordica charantia])

HSP 1 Score: 68.2 bits (165), Expect = 3.1e-08
Identity = 35/44 (79.55%), Postives = 38/44 (86.36%), Query Frame = 0

Query: 23  MVMDDLTVNPTSTILCITLLNKFNVKEIGALEERVVTLDVNEAV 67
           MVMDDL+V P STI  I LLNKFNVKE+GALEE+VVTLDVNE V
Sbjct: 173 MVMDDLSVKPMSTISSIALLNKFNVKEVGALEEKVVTLDVNEGV 216

BLAST of Spg009639 vs. NCBI nr
Match: XP_022139199.1 (uncharacterized protein LOC111010168 [Momordica charantia])

HSP 1 Score: 66.6 bits (161), Expect = 9.0e-08
Identity = 31/44 (70.45%), Postives = 38/44 (86.36%), Query Frame = 0

Query: 23  MVMDDLTVNPTSTILCITLLNKFNVKEIGALEERVVTLDVNEAV 67
           MVMDDLTV P STI  ITLLNKFN+KE+GALEE+++T+D N+ V
Sbjct: 116 MVMDDLTVKPMSTISSITLLNKFNIKEVGALEEKIITMDFNQGV 159

BLAST of Spg009639 vs. NCBI nr
Match: XP_004147723.1 (uncharacterized protein LOC101207526 [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 2.0e-07
Identity = 32/44 (72.73%), Postives = 39/44 (88.64%), Query Frame = 0

Query: 23  MVMDDLTVNPTSTILCITLLNKFNVKEIGALEERVVTLDVNEAV 67
           MVMDDL+V P STI  ITLLNKFN+KE+GALEE+VVTLDV++ +
Sbjct: 167 MVMDDLSVKPMSTISSITLLNKFNIKEVGALEEKVVTLDVSQGL 210

BLAST of Spg009639 vs. NCBI nr
Match: GFP96283.1 (hypothetical protein PHJA_001772400 [Phtheirospermum japonicum])

HSP 1 Score: 63.9 bits (154), Expect = 5.8e-07
Identity = 33/44 (75.00%), Postives = 36/44 (81.82%), Query Frame = 0

Query: 23  MVMDDLTVNPTSTILCITLLNKFNVKEIGALEERVVTLDVNEAV 67
           MVMDDL V P STI  ITLLNKFNVKE+GALEE+VV L +NE V
Sbjct: 78  MVMDDLVVKPMSTISSITLLNKFNVKEVGALEEKVVNLGMNEVV 121

BLAST of Spg009639 vs. ExPASy TrEMBL
Match: A0A5A7U8V2 (DUF674 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3341G00030 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-08
Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = 0

Query: 23  MVMDDLTVNPTSTILCITLLNKFNVKEIGALEERVVTLDVNEAV 67
           MVMDDL+V P STI  ITLLNKFN+KE+GALEE+V+TLDVN+ V
Sbjct: 168 MVMDDLSVKPMSTISSITLLNKFNIKEVGALEEKVITLDVNQGV 211

BLAST of Spg009639 vs. ExPASy TrEMBL
Match: A0A6J1CBJ8 (uncharacterized protein LOC111010013 OS=Momordica charantia OX=3673 GN=LOC111010013 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-08
Identity = 35/44 (79.55%), Postives = 38/44 (86.36%), Query Frame = 0

Query: 23  MVMDDLTVNPTSTILCITLLNKFNVKEIGALEERVVTLDVNEAV 67
           MVMDDL+V P STI  I LLNKFNVKE+GALEE+VVTLDVNE V
Sbjct: 173 MVMDDLSVKPMSTISSIALLNKFNVKEVGALEEKVVTLDVNEGV 216

BLAST of Spg009639 vs. ExPASy TrEMBL
Match: A0A1S3CGQ2 (uncharacterized protein LOC103500268 OS=Cucumis melo OX=3656 GN=LOC103500268 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-08
Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = 0

Query: 23  MVMDDLTVNPTSTILCITLLNKFNVKEIGALEERVVTLDVNEAV 67
           MVMDDL+V P STI  ITLLNKFN+KE+GALEE+V+TLDVN+ V
Sbjct: 168 MVMDDLSVKPMSTISSITLLNKFNIKEVGALEEKVITLDVNQGV 211

BLAST of Spg009639 vs. ExPASy TrEMBL
Match: A0A6J1CC90 (uncharacterized protein LOC111010168 OS=Momordica charantia OX=3673 GN=LOC111010168 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.4e-08
Identity = 31/44 (70.45%), Postives = 38/44 (86.36%), Query Frame = 0

Query: 23  MVMDDLTVNPTSTILCITLLNKFNVKEIGALEERVVTLDVNEAV 67
           MVMDDLTV P STI  ITLLNKFN+KE+GALEE+++T+D N+ V
Sbjct: 116 MVMDDLTVKPMSTISSITLLNKFNIKEVGALEEKIITMDFNQGV 159

BLAST of Spg009639 vs. ExPASy TrEMBL
Match: A0A0A0KLL7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G180325 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-07
Identity = 32/42 (76.19%), Postives = 38/42 (90.48%), Query Frame = 0

Query: 23  MVMDDLTVNPTSTILCITLLNKFNVKEIGALEERVVTLDVNE 65
           MVMDDL+V P STI  ITLLNKFN+KE+GALEE+VVTLDV++
Sbjct: 167 MVMDDLSVKPMSTISSITLLNKFNIKEVGALEEKVVTLDVSQ 208

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008461735.13.1e-0875.00PREDICTED: uncharacterized protein LOC103500268 [Cucumis melo] >KAA0052182.1 DUF... [more]
XP_022138964.13.1e-0879.55uncharacterized protein LOC111010013 [Momordica charantia][more]
XP_022139199.19.0e-0870.45uncharacterized protein LOC111010168 [Momordica charantia][more]
XP_004147723.12.0e-0772.73uncharacterized protein LOC101207526 [Cucumis sativus][more]
GFP96283.15.8e-0775.00hypothetical protein PHJA_001772400 [Phtheirospermum japonicum][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U8V21.5e-0875.00DUF674 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A6J1CBJ81.5e-0879.55uncharacterized protein LOC111010013 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A1S3CGQ21.5e-0875.00uncharacterized protein LOC103500268 OS=Cucumis melo OX=3656 GN=LOC103500268 PE=... [more]
A0A6J1CC904.4e-0870.45uncharacterized protein LOC111010168 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A0A0KLL71.3e-0776.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G180325 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21
NoneNo IPR availablePANTHERPTHR33103:SF50OS01G0154200 PROTEINcoord: 23..66
IPR007750Protein of unknown function DUF674PFAMPF05056DUF674coord: 21..65
e-value: 1.1E-5
score: 24.5
IPR007750Protein of unknown function DUF674PANTHERPTHR33103OS01G0153900 PROTEINcoord: 23..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg009639.1Spg009639.1mRNA