Spg009394 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg009394
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Cytochrome b6
Location	scaffold166: 11982 .. 12470 (+)
RNA-Seq Expression	Spg009394
Synteny	Spg009394

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTTTTACTATCGTCCGACCGTTACTGAGGCTTTTGCTTCTGTTCAATATATAATGACGGAAGCTAACTTTGGTTGGTTAATCCGATCAGTTCATAGATGGTCGGCAAGTATGATGGTCTTAATGATGATCCTGCACGTATTTCGCGTGTATCTTACTGGTGGCTTTAAAAAACCTCGTGAATTGACTTGGGTTACAGGTGTGGTTCTGGCTGTATTGACCGCATCCTTTGGTGTAACTGGTTATTCCTTACCTCGGGACCAAATTGGTTATTGGGCAGTCAAAATTGTAACAGGTGTACCGGAAGCTATTCCAGTAATAGGGTCGCCTTTGGTAGAGTTATTACGCGGAAGTGCTAGTGTGGGACAATCTACCTTGACTCGTTTTTATAGTTTACACACTTTTGTATTACCTCTTCTTACTGCCGTATTTATGTTAATGCACTTCCCAATGATACGTAAGCAAGGCATTTCTGGTCCTTTATAG

mRNA sequence

ATGACTTTTTACTATCGTCCGACCGTTACTGAGGCTTTTGCTTCTGTTCAATATATAATGACGGAAGCTAACTTTGGTTGGTTAATCCGATCAGTTCATAGATGGTCGGCAAGTATGATGGTCTTAATGATGATCCTGCACGTATTTCGCGTGTATCTTACTGGTGGCTTTAAAAAACCTCGTGAATTGACTTGGGTTACAGGTGTGGTTCTGGCTGTATTGACCGCATCCTTTGGTGTAACTGGTTATTCCTTACCTCGGGACCAAATTGGTTATTGGGCAGTCAAAATTGTAACAGGTGTACCGGAAGCTATTCCAGTAATAGGGTCGCCTTTGGTAGAGTTATTACGCGGAAGTGCTAGTGTGGGACAATCTACCTTGACTCGTTTTTATAGTTTACACACTTTTGTATTACCTCTTCTTACTGCCGTATTTATGTTAATGCACTTCCCAATGATACGTAAGCAAGGCATTTCTGGTCCTTTATAG

Coding sequence (CDS)

ATGACTTTTTACTATCGTCCGACCGTTACTGAGGCTTTTGCTTCTGTTCAATATATAATGACGGAAGCTAACTTTGGTTGGTTAATCCGATCAGTTCATAGATGGTCGGCAAGTATGATGGTCTTAATGATGATCCTGCACGTATTTCGCGTGTATCTTACTGGTGGCTTTAAAAAACCTCGTGAATTGACTTGGGTTACAGGTGTGGTTCTGGCTGTATTGACCGCATCCTTTGGTGTAACTGGTTATTCCTTACCTCGGGACCAAATTGGTTATTGGGCAGTCAAAATTGTAACAGGTGTACCGGAAGCTATTCCAGTAATAGGGTCGCCTTTGGTAGAGTTATTACGCGGAAGTGCTAGTGTGGGACAATCTACCTTGACTCGTTTTTATAGTTTACACACTTTTGTATTACCTCTTCTTACTGCCGTATTTATGTTAATGCACTTCCCAATGATACGTAAGCAAGGCATTTCTGGTCCTTTATAG

Protein sequence

MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL

Homology

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BLAST of Spg009394 vs. NCBI nr
Match: YP_009662940.1 (PetB [Ipomoea asarifolia] >YP_009663021.1 PetB [Ipomoea carnea] >YP_009663102.1 PetB [Ipomoea cavalcantei] >YP_009663183.1 PetB [Ipomoea goyazensis] >YP_009663264.1 PetB [Ipomoea marabensis] >YP_009663345.1 PetB [Ipomoea maurandioides] >YP_009663426.1 PetB [Ipomoea quamoclit] >QCU81366.1 PetB [Ipomoea sp. ML-2019] >QCU82337.1 PetB [Ipomoea triloba] >QCU81447.1 PetB [Ipomoea sp. ML-2019] >QCU81528.1 PetB [Ipomoea sp. ML-2019] >QCU81609.1 PetB [Ipomoea sp. ML-2019])

HSP 1 Score: 323.2 bits (827), Expect = 1.3e-84
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 34  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 93

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA
Sbjct: 94  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 153

Query: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 163
           SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 154 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 195

[Close]

BLAST of Spg009394 vs. NCBI nr
Match: YP_009447480.1 (cytochrome b6 [Cucurbita maxima] >YP_009447565.1 cytochrome b6 [Cucurbita moschata] >YP_009456176.1 cytochrome b6 [Lagenaria siceraria] >ASY96346.1 cytochrome b6 [Cucumis melo subsp. agrestis] >ASY96607.1 cytochrome b6 [Cucumis melo var. conomon] >ASY96694.1 cytochrome b6 [Cucumis melo var. makuwa] >ASY96781.1 cytochrome b6 [Cucumis melo var. momordica] >ASY96868.1 cytochrome b6 [Cucumis melo var. dudaim] >ASY96955.1 cytochrome b6 [Cucumis melo var. cantalupo] >ASY97129.1 cytochrome b6 [Cucumis melo var. inodorus] >ASY97303.1 cytochrome b6 [Cucumis melo var. flexuosus] >ASY97478.1 cytochrome b6 [Cucumis sativus var. hardwickii])

HSP 1 Score: 323.2 bits (827), Expect = 1.3e-84
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA
Sbjct: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 120

Query: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 163
           SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 162

[Close]

BLAST of Spg009394 vs. NCBI nr
Match: YP_009128421.1 (cytochrome b6 [Ipomoea batatas] >AJP09593.1 cytochrome b6 [Ipomoea batatas])

HSP 1 Score: 323.2 bits (827), Expect = 1.3e-84
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 59  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 118

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA
Sbjct: 119 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 178

Query: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 163
           SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 179 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 220

[Close]

BLAST of Spg009394 vs. NCBI nr
Match: AYU57831.1 (cytochrome b6 [Carpinus fangiana])

HSP 1 Score: 323.2 bits (827), Expect = 1.3e-84
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 54  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 113

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA
Sbjct: 114 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 173

Query: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 163
           SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 174 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of Spg009394 vs. NCBI nr
Match: ATL60458.1 (cytochrome b6 [Cephalanthus occidentalis])

HSP 1 Score: 323.2 bits (827), Expect = 1.3e-84
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 54  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 113

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA
Sbjct: 114 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 173

Query: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 163
           SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 174 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of Spg009394 vs. ExPASy Swiss-Prot
Match: A0A365 (Cytochrome b6 OS=Coffea arabica OX=13443 GN=petB PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 1.7e-87
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 54  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 113

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA
Sbjct: 114 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 173

Query: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 163
           SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 174 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of Spg009394 vs. ExPASy Swiss-Prot
Match: Q4VZI6 (Cytochrome b6 OS=Cucumis sativus OX=3659 GN=petB PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 1.7e-87
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 54  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 113

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA
Sbjct: 114 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 173

Query: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 163
           SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 174 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of Spg009394 vs. ExPASy Swiss-Prot
Match: Q0G9I9 (Cytochrome b6 OS=Liriodendron tulipifera OX=3415 GN=petB PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 2.2e-87
Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 54  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 113

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 120
           RELTWVTGV+LAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA
Sbjct: 114 RELTWVTGVILAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 173

Query: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 163
           SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 174 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of Spg009394 vs. ExPASy Swiss-Prot
Match: Q0G9T2 (Cytochrome b6 OS=Daucus carota OX=4039 GN=petB PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 3.8e-87
Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVT+AFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 54  MTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 113

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA
Sbjct: 114 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 173

Query: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 163
           SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 174 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of Spg009394 vs. ExPASy Swiss-Prot
Match: Q06GW7 (Cytochrome b6 OS=Drimys granadensis OX=224735 GN=petB PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 3.8e-87
Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 54  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 113

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVP+AIPVIGSPLVELLRGSA
Sbjct: 114 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSA 173

Query: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 163
           SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 174 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of Spg009394 vs. ExPASy TrEMBL
Match: A0A346QBD9 (Cytochrome b6 OS=Holboellia latifolia OX=41782 GN=petB PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.4e-85
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 54  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 113

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA
Sbjct: 114 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 173

Query: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 163
           SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 174 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of Spg009394 vs. ExPASy TrEMBL
Match: A0A649UJT2 (Cytochrome b6 OS=Ilex asprella OX=185493 GN=petB PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.4e-85
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 54  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 113

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA
Sbjct: 114 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 173

Query: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 163
           SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 174 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of Spg009394 vs. ExPASy TrEMBL
Match: A0A222NMJ1 (Cytochrome b6 OS=Caryopteris mongholica OX=201515 GN=petB PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.4e-85
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 54  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 113

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA
Sbjct: 114 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 173

Query: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 163
           SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 174 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of Spg009394 vs. ExPASy TrEMBL
Match: A0A5P8YW84 (Cytochrome b6 OS=Fagus japonica var. multinervis OX=1531991 GN=petB PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.4e-85
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 54  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 113

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA
Sbjct: 114 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 173

Query: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 163
           SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 174 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of Spg009394 vs. ExPASy TrEMBL
Match: A0A0G3F6U1 (Cytochrome b6 OS=Rosmarinus officinalis OX=39367 GN=petB PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.4e-85
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 54  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 113

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA
Sbjct: 114 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 173

Query: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 163
           SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL
Sbjct: 174 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of Spg009394 vs. TAIR 10
Match: ATCG00720.1 (photosynthetic electron transfer B )

HSP 1 Score: 313.5 bits (802), Expect = 9.7e-86
Identity = 158/162 (97.53%), Postives = 159/162 (98.15%), Query Frame = 0


Query: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 54  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 113

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 120
           RELTWVTGVVL VLTASFGVTGYSLP DQIGYWAVKIVTGVP+AIPVIGSPLVELLRGSA
Sbjct: 114 RELTWVTGVVLGVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSA 173

Query: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 163
           SVGQSTLTRFYSLHTFVLPLLTAVFMLMHF MIRKQGISGPL
Sbjct: 174 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215

[Close]

BLAST of Spg009394 vs. TAIR 10
Match: AT2G07727.1 (Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal )

HSP 1 Score: 117.9 bits (294), Expect = 7.8e-27
Identity = 60/162 (37.04%), Postives = 90/162 (55.56%), Query Frame = 0


Query: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60
           +  +Y P V  AF SV++IM +   GWL+R +H   ASM ++++ LH+FR      +  P
Sbjct: 56  LAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFLIVVYLHIFRGLYHASYSSP 115

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 120
           RE  W  GVV+ +L       GY LP  Q+ +W   ++T +  AIPV+G  +V  L G  
Sbjct: 116 REFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGF 175

Query: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 163
           SV  +TL RF+SLH  +LP +     L+H   + + G + PL
Sbjct: 176 SVDNATLNRFFSLH-HLLPFILVGASLLHLAALHQYGSNNPL 216

[Close]

BLAST of Spg009394 vs. TAIR 10
Match: ATMG00220.1 (apocytochrome b )

HSP 1 Score: 117.9 bits (294), Expect = 7.8e-27
Identity = 60/162 (37.04%), Postives = 90/162 (55.56%), Query Frame = 0


Query: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60
           +  +Y P V  AF SV++IM +   GWL+R +H   ASM ++++ LH+FR      +  P
Sbjct: 56  LAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFLIVVYLHIFRGLYHASYSSP 115

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 120
           RE  W  GVV+ +L       GY LP  Q+ +W   ++T +  AIPV+G  +V  L G  
Sbjct: 116 REFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGF 175

Query: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 163
           SV  +TL RF+SLH  +LP +     L+H   + + G + PL
Sbjct: 176 SVDNATLNRFFSLH-HLLPFILVGASLLHLAALHQYGSNNPL 216

The following BLAST results are available for this feature:

BLAST of Spg009394 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009662940.1	1.3e-84	100.00	PetB [Ipomoea asarifolia] >YP_009663021.1 PetB [Ipomoea carnea] >YP_009663102.1 ...	[more]
YP_009447480.1	1.3e-84	100.00	cytochrome b6 [Cucurbita maxima] >YP_009447565.1 cytochrome b6 [Cucurbita moscha...	[more]
YP_009128421.1	1.3e-84	100.00	cytochrome b6 [Ipomoea batatas] >AJP09593.1 cytochrome b6 [Ipomoea batatas]	[more]
AYU57831.1	1.3e-84	100.00	cytochrome b6 [Carpinus fangiana]	[more]
ATL60458.1	1.3e-84	100.00	cytochrome b6 [Cephalanthus occidentalis]	[more]

BLAST of Spg009394 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A365	1.7e-87	100.00	Cytochrome b6 OS=Coffea arabica OX=13443 GN=petB PE=3 SV=1	[more]
Q4VZI6	1.7e-87	100.00	Cytochrome b6 OS=Cucumis sativus OX=3659 GN=petB PE=3 SV=1	[more]
Q0G9I9	2.2e-87	99.38	Cytochrome b6 OS=Liriodendron tulipifera OX=3415 GN=petB PE=3 SV=1	[more]
Q0G9T2	3.8e-87	99.38	Cytochrome b6 OS=Daucus carota OX=4039 GN=petB PE=3 SV=1	[more]
Q06GW7	3.8e-87	99.38	Cytochrome b6 OS=Drimys granadensis OX=224735 GN=petB PE=3 SV=1	[more]

BLAST of Spg009394 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A346QBD9	6.4e-85	100.00	Cytochrome b6 OS=Holboellia latifolia OX=41782 GN=petB PE=3 SV=1	[more]
A0A649UJT2	6.4e-85	100.00	Cytochrome b6 OS=Ilex asprella OX=185493 GN=petB PE=3 SV=1	[more]
A0A222NMJ1	6.4e-85	100.00	Cytochrome b6 OS=Caryopteris mongholica OX=201515 GN=petB PE=3 SV=1	[more]
A0A5P8YW84	6.4e-85	100.00	Cytochrome b6 OS=Fagus japonica var. multinervis OX=1531991 GN=petB PE=3 SV=1	[more]
A0A0G3F6U1	6.4e-85	100.00	Cytochrome b6 OS=Rosmarinus officinalis OX=39367 GN=petB PE=3 SV=1	[more]

BLAST of Spg009394 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00720.1	9.7e-86	97.53	photosynthetic electron transfer B	[more]
AT2G07727.1	7.8e-27	37.04	Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal	[more]
ATMG00220.1	7.8e-27	37.04	apocytochrome b	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027387	Cytochrome b/b6-like domain superfamily	GENE3D	1.20.810.10	Cytochrome Bc1 Complex; Chain C	coord: 1..162 e-value: 7.1E-72 score: 244.0
IPR005797	Cytochrome b/b6, N-terminal	PFAM	PF00033	Cytochrome_B	coord: 1..157 e-value: 3.5E-71 score: 238.9
IPR005797	Cytochrome b/b6, N-terminal	PROSITE	PS51002	CYTB_NTER	coord: 1..162 score: 30.78013
IPR005797	Cytochrome b/b6, N-terminal	CDD	cd00284	Cytochrome_b_N	coord: 1..159 e-value: 1.15241E-74 score: 219.932
IPR023530	Cytochrome b6, PetB	PANTHER	PTHR19271:SF20	SUBFAMILY NOT NAMED	coord: 1..162
None	No IPR available	PANTHER	PTHR19271	CYTOCHROME B	coord: 1..162
IPR016174	Di-haem cytochrome, transmembrane	SUPERFAMILY	81342	Transmembrane di-heme cytochromes	coord: 1..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg009394.1	Spg009394.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0022904	respiratory electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0045158	electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0016491	oxidoreductase activity