Spg009272 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg009272
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Locationscaffold7: 40110950 .. 40119593 (+)
RNA-Seq ExpressionSpg009272
SyntenySpg009272
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAATAGGTCGAGTCTACAAACTGGGGAACTAGATAAGACAGTGAGTGACAAAATGAATTTCGAAAATGGTTTCCAACGATTGTTCATGTTTAGATGTTTACATGCTTTTCTATGAATGATAAATTGTTTTTATGAACAGTTTCAAGCATGAGTTTTGAGCTCATATTTTCTAATGAGGTTTATATACGAGCACGTGGCTAATGACTTTATGAAAAGTAGTTGAAACGATATCTTTTAATGTAAAGTATGGATTAGCAAGTACTTTTAAACGATTTTCAGTTTTTCACGAGCAAGCTGAGTAAGTTTAAGTTTTACGAAAAATAACGATAAGCAGGCATGTTTTAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGTTGTATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAATGTTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAAATGTTTGATGTACTTGATATGCTTGCAAGATTTTTAATGACGAACTTGCGAGATATTTTAGAAAGCCTTTTTCATTACACGTTAATGTTAAACGCTTTGATTGAGCATATTTATACGTTTAAAGGTTTATCACGTGTTTTGACTTTCGGATTTAGAGTTTTAAAGTTAGTCACTCACTGGGCTTCGTAGCTCATTCTTTCAAAATGTTCTTCCACATTTCAGGTAGAGATCGAGCTCTCGAGCCTGATACACTGCCAATGTCTGCTGAAAGCTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCGTATTGTAAATGTTTTGTAAGGATTGGATAGTATAGTCCTAGAGGTCGTGGTTGTATAAACCCTAGTTGTATATGTTTTTGGTTGTCACATCTATATCAGGTTATTATCCGAACCAAGTTATGTCAGGGCGACACCTCGTGTTTGTTGAAAGTTTTTTTCAGGGATTCCGCTGTGTTCTGTTCCATGTAGAATGCTTTATATCCATGATTAGTATGTTTATCAGGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACAACTTGGTATCAGAGCAGTTAGCTCCATGGGAAAAGAGACATGGTAGTTAGTGATAAGAAAATCCAGGAAGTAAATAGTTAGATTTTGGGTCAGTTTAGATAGAACTAGCGGAGTATGGTCCGAGTGTTGTTGAGAGTGAGTCCAGTCCGGACTAGAATGTGGGTATAAGTTTAGTATCATGCATCTGAGTGAAGTATATATAGCATGTCTGATGTGTTGATATGTTATAGGAGTCATGCCACCACGTCCCAGCAGACGACGCAGGCAGAATCAGGACGGGACGTAGGATCCTACCCAAAGTCAATCTGAAAGGGGATCCATTACCCCGAGAGGTCAGGATGAGGCAGGGAGTGAGCGATTTTCTAGATCTGCACAGGAGATCGGTAGGCCAGAGAGAGCAGGGCCTAGTGATCCGGAAAAGATGTATGGGATAGAACGGTTGAAGAAGTTAGGAGCCGCAGTGTTTGAGGGTTCCACAGATCCAGCTGACGCCGAGGTCTGGTTGAATATGTTGGAGAAATGCTTCGACGTGATGAGTTGTCCTGAGGAGCGAAAAGTCAAATTAGCCACATTCCTTTTGCAGAAGGAGGCGGAGGGATGGTGGAAGTCCATTATAGCCAGGCGCAGTGATGCACGTAAGTTAGATTGGCAGACATTTAGAGGCATATTCGAGGAAAAGTATTATCCCACCACATATTGTGAGGCAAATAGAGATGAGTTTCTGGAGCTAAAACAAGGGTCACTTTCAGTGGCTAAGTACGAGAGAAAGTATATCGAGCTTTCACGGTATGCTGAAGTGATTGTGGCATCTGAGAGTGACAGGTGTCGCAGGTTTGAGAGAGGGCTACGTTTTGAGATACGTACCCCAGTTACCGCTGTTGCTAAAGGGACGGATTTTTCCCAGCTAGTAGAGACTGCTTTACGTGTGGAGCAGGGTATTATAGAGGAAAAGTCGGCTGCGGAGCCTAGTCGTGGAGCTCCAACAGCTAGTGGTTTTTGAGGTCGTGAGCAGCGGAGGTTCACACCTGGAGTGAATGTTTCAGGTCGTCAAGACTTCAAGTGCCAATCTGGTGGCCAGTTGTCGAGGCAGATGAGTTCGGGTAGTGCTTATCAGAGGCAGAGTCAGAGAGCCCCCAGTCAGTCTGCGAGTTCAGTAGCAAGACCGCGAACGGGTCAGGAGTCCGTTGCTAGTGAATCCAGGAGAACCCCATGTGTAAGTTGTGGCAAAAATCATCGGGGTCAATGTCTTGTTGGCGCCAGTGTGTGTTACCAGTGTGGACAACCAGGGCATTTCAAGAGGGATTGCCCACAGCTGAGGGCAACAGTTCAGAGGGACCAGGGAGTTGAGTCCCACACAGTTGAGCAGCCGAGAATCCCAACAGCCGCAGGAGAGGGAACTAGTGGTGCAAGGCAAAAGGGAGTTGTGGGGAGACATAGGCAGCAGGGAAAAGTCTACGCCATGACTCAACAGGAAGCAGAGGATGCACCAGATGTGATCATTGGTACGATTTTGATTTGTAATGTACCTGCACGTGTTTTATTAGATCCAGGCACTACGCATTCCTTTGTTTCTAGTATGTTTTTAACTAAGCTGAATAGGATGCTAGAGCCTTTATCTGAGGAGTTAGTCATATGCACTCCAGTTGGTGACATTTTATAAGTCAATGAAGTGTTGCGTGATTGTGAGGTTGTAGTGGAAGGTCTCTGTAAGTTAGTGGATCTTCTTCCCCTAGAGTTGCAGGCGTTGGATGTGATTTTGGGAATGGATTTCTTGTTCACTCACTATGCTTCTATGGATTACCATAGGAAGGAAGTGACTTTTAAGAAACCAGGTTTGACTGAAGTAGTTTTTAGGGGTGAGAGGAACATTATTCCTACAAGTTTGATTTCAGCTCTGAGAGCTGAGAAGTTGTTGAGGAAGGGTTGCACAACGTTTCTTGCACACGTGGTAGAGGTGCAAGAAGAAAAGATGAAACCAGAAGATGTTTCTGTGGTGAATGAATTTCTTTATGTTTTTCCAGCTGATCTATCGGGTTTGCCACCTGATAGAGAGGTGGAGTTCACTATTGAATTGTTACCAGGAACAACACCTATTTCACAGGCACCGTACAGAATGGCTCCGAGCGAGCTTAAGGAGCTAAAGGTGCAGTTGCAAGAACTAGTCGACAAGGGATACATCAGGCCTAGCGTATCACCTTGGGGAGCTCCAGTGTTATTCGTGAAGAAGAAAGATGGTACCCTGAGATTATGCATTGATTACAGGCAGTTAAACAAGGTCACGATACGTAACAAGTATCCTTTACCACGCATCGATGACTTGTTTGACCAGTTAAGGGGAGCAGTAGTGTTCTCTAAAATTGATCTGAGGTCAGGATACCACCAGTTGAAGGTTAGGGAATCAGATATTCCTATGGCAGCATTCAGGACAAGGTATGGGCACTATGAGTTTTTAGTGATGCCATTTGGTTTAACGAATGCGCCAACAGTTTTCATGGACCTCATGAACAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATAGTGTTCATCGACGACATTCTAGTTTATTCAATTGACAAGAAAGCCCATGAGGAACATCTGAGGATTGTTCTACAGACAGTACGTGATAAACAGCTATACGCTAAGTTCAGCAAATGTGAGTTCTGGTTGAATCAAGTAGTGTTCTTAGGGCATGTAGTTTCAGCGGACGGAGTTAGTGTTGACCCGCAGAAAGTGGAAGCTATTGTCAACTGGGAGAGACCAGCTAGTGCAACAGAGGTTTGTAGTTTCCTAGGCCTGGCCGGATACTACAGACGTTTTGTTGAGGATTTCTCACGGTTAGCATTACCCTTGACAGATTTGACAAGGAAGAATGCTAAGTTTGAGTGGTCGGATAAATGCGAACAGAGTTTCCAAGAGCTGAAAAAGAGATTGGTGACAGCGCCTATTCTGACACTTCATGTAACAGGGAAGGAGTATGTGATCTATTGTGATGCTTCGAGGCAAGGATTAGGTTGTGTGCTGATGCAGGAAGGAAAGGTAATAGCTTATGCTTCAAGGCAATTGAAGAAGCGTGAGTGTAATTACCCTACCCACGATCTTGAGCTAGCAGCAGTAGTTCTAGCAGTGAAGATCTGGAGACATTATTTATTCGGTGAGAAGTGCCACATTTTCATAGATCATAAGAGTTTGAAGTACATCTTTGATCAGAAAGAGTTGAATCTGAGGCAGAGGCGATGGCTAAAACTGATTAAAGACTATGACTGCACCATAGAATATCATCCAGGTAAGGCTAACGTGGTAGCAGATCCGTTGAGTAGGAAGTCGAGACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGCAAGCTTGCTATGTGAGTTAAGAGGTTTCAAGGCAGTTATGACTGCAGGAAGCTCAGGGAGTCTTTTAGCTCAATTCCAGGTTAGGTCTTCTCTAGTAGCAGAGATTGTGAGAAGACAGCCAGAGGATAGTAACTTACAGAAAATGCTTGCAAAGTCCAGGCAAGGCCCCGAGGCAGAATTTGAGCTGAGAGCAGACGAAGCCATAGTTAAGTAGGGAAGACTATGTGTTCCGAGTATTAGTGAGCATAAGAGTGCTATATTAGACGAAGCTCACAGTTCAGCTTACGTTATGCATCCAGGAAGCACCAAGATGTATAGAACTTTGAAGAAAACTTATTGGTGGTCTGGTATGAAGCGGGAGATAGTTGAATATGTCGACAGATGTTTGATCTGCCAACAGGTTAAACCAGTAAGACAGAGGCCAGGAGGACTCCTTAATCCACTGCCAGTGCCAGAGTGGAAGTGGGAGCATATTGCCAAGGATTTTCTGTTTGGATTACCTCGTACTCCTAGTGGACACGATGGTATATGGGCAATAGTGGACAGACTCACCAAGACAGCACGGTTTATACCGATTAAAGCGACGTATACACTAGATCAGTTAGCTAAACTATACGTCGACATGATTGTGAGTCAACATGGAGTTCCAGTGTCCATAGTTTCAGATAGGGATCCAAGGTTTACTTCTAAGTTTTGGCCTAGTGTGCAGAAAGCAATGGGAACAAAGTTGAAGTTCAGTACAGCGTTCCATCCCCAGAAAGATGGTCAGTCAGAGAGGACCATCCAGACCTTAGAGGACATGTTGAGAGCATGTGTCCTTCAGTTTAAGGGAAGTTGGGATACTCACTTATCACTTATGGAGTTCGCTTATAATAATAGCTACCAGTCTAGCATCGGCATGGCACCATTCGAAGCTTTGTATGGCAGACCATGCAGGACTCCTGTGTGCTGGAACGAAGTGGGAGAGCGAAAGCTAGTTGGTCCTGAGTTGGTACAAGTTACGTCAGACAACATTAAGCTAATTAGGGAGAATCTTAAACTAGCTCAGGATCGACAGAAGAGCTATGAAGATAAGCGACGAAGAGACTTAGAGTTCCAAGTTGGAGATCGAGTTTTCTTAAAGTTATCTCCGTGGAAAGGTGTTCTTCGCTCTGGGAGGAAAGGTAAGCTGAGTCCTAGATATATTGGTCCTTACCAGATATTAGAACGAGTTGGACCAGCAGCCTATAGACTTGAGTTGCACGTGGAACTCGCTCGAATAAATGATGTTTTCCATGTGTCCATGTTGAGGAAATATATTCCAAATCCGTCCCATGTGTTGCAAATGCAACCAATTGAGCTGAAGGAAGACTTGAGTTATAAGGAGGAAGCGGTTCAGATCCTCAACAGGAAGGAGCAAGTTTTGAGAAACAAAACGATCCCACTCGTGAAAGTTCTTTGGAGACATCACAGAGTAGAGGAGGCAACCTGGAAGTCAGAAGATCAAATGAGGAGGAGTTACCCGACACTCTTCACCTAAGGACTTCGAAATTTCGAGGACGAAATTTCATAAGGGGGAGGTAAGTTGTAAACCCGAGACTTTCCTTAGATAATTTTCTCTTGTCATCTATTGGTGGTTTCATTGTTGGACTAAGTTGTTGGAAATTATCAATTTAAAAAGAATGGAAATAAAGAAGAAAGAAAAGGAAAAGGAAAAGAAATCAGCAAAACAAAAGAAAAAAAAAAAAGAGAAAATGAGTGGGAATGGACAGCACAAAAGCCCACCACCGACTAGACTTTTTATCAGCCCATTTTCATTTCATTTCTCATCTTTTTCAACCCAAACTTTAAGAGCACATTAAGGAGAGAGTGAAGGAGGAAGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAGAAGATAACAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGGGTGCAAAACTATCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGAAAATAAGAGGTGAGGTTTGATTTTCTTGAAAGTTAGTTCATTTTCTAGCAAATTTAATGAAGGAAGCTTGAGCTAAATCGTATGAGAAGTTAATGGGTTTTGGAATGGAAAACATAGCACAGGATTTTCGAGCAAACCAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTTGGGGGTGTACAAGTCGAATCAGAAGCTCCATTTGGTATGGTTGGAAATCTTATTCAATTTCCTACAACCTTCATGAATATTTCGTGAGCCAAAAATGACTTTAAGTAGGGTTAATTTCAGGAGTTAGATAAAGGGTAGCAGGGAACCTCGAATCTGTGTTGTCTGTGTTCGGGGAAATTCTGGGCAAATCGGTTGGGAATCTTATTTTCATTTCTTTCGTTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTGTATTTCATTAATTTTGGTTCAGTATTGAGGAAGTTATGGGTGTTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAAAAGTAGAATGTGAATGTGATTCTTAATCCAATTGTTTAAAAATTCATGAGCATGGAAAGACAAAGTTATCTATTGATGGTTCTAATGCTCGGTTTTGGTTATTTGATAGGCCAAGAGGAAATAGGTCGAGTCTACAAATCGGGGAACTAGATAAGACAGTGAGTGACAAAATGAATTTTGAAAATGGTTTCCAACGGTTGTTCATGTTTAGATGTTTACATGCTTTTCTATGAATGATACATGGTTTTTATGAACAGTTTCAAGCATGAGTTTTGAGCTCAGATTTTCTAATGAGGTTTATATACGAGCACGTGGCTAATGACTTTCTGAAAAGTAGTTGAAACGATATCTTTTAAAGTAAAGTATAGATTAGCAAGTACTTTTAAACGATTTTAATTTTTTCACGAGCAAGCTGAGTAAGTTTAAGTTTTACGAAAAATAACGATAAGCAGGCATGTTTTAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGTTGTATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAATGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAATGTAGATCGGTCATGTTAGTTAAAACGTTTGATGTACTTGATATGCTTTGCTAGATTTTTAATGACGAACTTGCGAGATATTTTAGAAAGCCTTTTTCATTACACGTTTATGTTAAACGCTTTGATTGAGCATATTTATATGTTTAAAGGTTTATCACATGTTTTGACTTTCGGATTTAGAGTTTTAAAGTTAGTCACTCACTGGGCTTCGTAGCTCATTCTTTCAAAATGTTCTTCACATTTCAGGTAGAGATCGAGCTCCCGGTGCCTAATACACTGCCAACGTCTGCTGAAAGCTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTAAGGATTGGATAATATAGTCCTAGAGGTCGTTGTTGTATAAACCCTAGTTGTATATGTTTTTGGTTATGACATCTATATCAGGTTATTATCCGAACCAAGTTATGTTAGGGCGACACCTCGTGTTTGTTGAAAGTTTTTTTCAGGGATTCCGCTGTGTTCTGTTTCATGTAGAATGCTTTATATCTATGATTAGTATGTTTATCAGGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGAGTGTGACAGTTGGGATGGAGAGGCGACATTCGACCCTGATTGAGGAGTGGCCTGTGATGTGGAGGCTTTATCCTTCCTCTGGATGTTGTTCTGCTGGAGCTTCCCTATCAAGGACAAGTCAATGGTTGGTTTAA

mRNA sequence

ATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTAGAGATCGAGCTCTCGAGCCTGATACACTGCCAATGTCTGCTGAAAGCTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCGTATTGTAAATGTTTTGTTCAACGTTCAGGAGGGTCAGCGGGAGTCATGCCACCACGTCCCAGCAGACGACGCAGGCAGAATCAGGACGGGACGTAGGATCCTACCCAAAGTCAATCTGAAAGGGGATCCATTACCCCGAGAGCACATTAAGGAGAGAGTGAAGGAGGAAGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAGAAGATAACAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGGGTGCAAAACTATCAACCTCTGGATTTTCGAGCAAACCAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTTGGGGGTGTACAAGTCGAATCAGAAGCTCCATTTGGTAGAGATCGAGCTCCCGGTGCCTAATACACTGCCAACGTCTGCTGAAAGCTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGAGTGTGACAGTTGGGATGGAGAGGCGACATTCGACCCTGATTGAGGAGTGGCCTGTGATGTGGAGGCTTTATCCTTCCTCTGGATGTTGTTCTGCTGGAGCTTCCCTATCAAGGACAAGTCAATGGTTGGTTTAA

Coding sequence (CDS)

ATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTAGAGATCGAGCTCTCGAGCCTGATACACTGCCAATGTCTGCTGAAAGCTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCGTATTGTAAATGTTTTGTTCAACGTTCAGGAGGGTCAGCGGGAGTCATGCCACCACGTCCCAGCAGACGACGCAGGCAGAATCAGGACGGGACGTAGGATCCTACCCAAAGTCAATCTGAAAGGGGATCCATTACCCCGAGAGCACATTAAGGAGAGAGTGAAGGAGGAAGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAGAAGATAACAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGGGTGCAAAACTATCAACCTCTGGATTTTCGAGCAAACCAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTTGGGGGTGTACAAGTCGAATCAGAAGCTCCATTTGGTAGAGATCGAGCTCCCGGTGCCTAATACACTGCCAACGTCTGCTGAAAGCTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGAGTGTGACAGTTGGGATGGAGAGGCGACATTCGACCCTGATTGAGGAGTGGCCTGTGATGTGGAGGCTTTATCCTTCCTCTGGATGTTGTTCTGCTGGAGCTTCCCTATCAAGGACAAGTCAATGGTTGGTTTAA

Protein sequence

MGVLGGPHYIVGLVNVGCTGRALHNVDRSCRDRALEPDTLPMSAESSRSSSSTWVELYIESVRIVNVLFNVQEGQRESCHHVPADDAGRIRTGRRILPKVNLKGDPLPREHIKERVKEEEEEEFRGLRLKKITKAHAKPAIAESGCKTINLWIFEQTRRISGVLWCFEHLGVYKSNQKLHLVEIELPVPNTLPTSAESSRSSSSTWVELYIESVHIVNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGSVTVGMERRHSTLIEEWPVMWRLYPSSGCCSAGASLSRTSQWLV
Homology
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BLAST of Spg009272 vs. NCBI nr
Match: KAA0052218.1 (uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK01785.1 uncharacterized protein E5676_scaffold113G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 107.5 bits (267), Expect = 2.1e-19
Identity = 74/192 (38.54%), Postives = 95/192 (49.48%), Query Frame = 0 

Query: 132 ITKAHAKPAIAESGCKTINLWIF-----------EQTRRIS---GVLWCFEHLGVYKSNQ 191
           I K +AKPAIAESGC    L +            E TR +S   G L   + L +     
Sbjct: 23  IEKVNAKPAIAESGCNCQPLIVLFGLSYLEELRGESTRFLSKSGGFLVFSDALSILPRGN 82

Query: 192 KLHL--------VEIELPVPNTLPTSAESSRSSSSTWVELYIESVHIVNVLFNVQ----- 251
           + +L        VEIELPVP+TLPTSAESS+S+SSTW+ELY ESVH+  + +        
Sbjct: 83  RPNLHTGKLDKTVEIELPVPDTLPTSAESSKSNSSTWLELYFESVHVEMLFYKPSDVRVA 142

Query: 252 -----EGQRVSLEEDDVRWLHAIFRAKLAGGPGGSVTVGMERRHSTLIEEWPVMWRLYPS 292
                EG    +  DD+ WLHA+F AK AG PGG V      R     ++       YP+
Sbjct: 143 SYVCWEGSAGIVRGDDLCWLHAVFWAKTAGSPGGGVMPPRTSRRRRQNQD----GMQYPT 202

[Close]
BLAST of Spg009272 vs. NCBI nr
Match: KAA0037581.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 106.7 bits (265), Expect = 3.5e-19
Identity = 63/122 (51.64%), Postives = 76/122 (62.30%), Query Frame = 0 

Query: 148  TINLWIFEQTRRISGVLWCF-------EHLGVYKSNQKLHLVEIELPVPNTLPTSAESSR 207
            T+NLW+F  +   S  L  F         L V+KSNQKL+LVEIELPVP+TL TSAESSR
Sbjct: 1650 TVNLWLFCSSTGFSSKLRGFLVFSDALSILEVHKSNQKLYLVEIELPVPDTLSTSAESSR 1709

Query: 208  SSSSTWVELYIESVHI---VNVLFNVQEGQRVSL------EEDDVRWLHAIFRAKLAGGP 254
            S+SSTW+ELY ESVH+     V+   +  Q   L        +DV WLHA+F AK AGGP
Sbjct: 1710 SNSSTWLELYFESVHVEMFCKVILQTKRCQGCILWSAGIVRGEDVCWLHAVFWAKAAGGP 1769

[Close]
BLAST of Spg009272 vs. NCBI nr
Match: KAA0042035.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 103.2 bits (256), Expect = 3.9e-18
Identity = 66/156 (42.31%), Postives = 84/156 (53.85%), Query Frame = 0 

Query: 170  LGVYKSNQKLHL-----------------VEIELPVPNTLPTSAESSRSSSSTWVELYIE 229
            L V+KSNQKL+L                 VEIELPVP+TLPTSAES  S+SSTW+ELY E
Sbjct: 1401 LEVHKSNQKLYLVIFSLSTLSVLRDNDAVVEIELPVPDTLPTSAESLESNSSTWLELYFE 1460

Query: 230  SVHI-------------VNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGSVTVGM 289
            SVH+             ++++ NV  G    +  DDV WLHA+FRAK AGGPGG VT  +
Sbjct: 1461 SVHVEMFCYFTNQGMSGLHLMLNV--GSVGIVRGDDVCWLHAVFRAKTAGGPGGGVTFYV 1520

Query: 290  ERRHSTLIEEWPVMWRLYPSSGCCSAGASLSRTSQW 296
            +   S+   +      L  S+   S   S + T  W
Sbjct: 1521 QASRSSTRSQ------LVSSTESSSTDPSYALTRHW 1548

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BLAST of Spg009272 vs. NCBI nr
Match: TYK17971.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 103.2 bits (256), Expect = 3.9e-18
Identity = 66/156 (42.31%), Postives = 84/156 (53.85%), Query Frame = 0 

Query: 170  LGVYKSNQKLHL-----------------VEIELPVPNTLPTSAESSRSSSSTWVELYIE 229
            L V+KSNQKL+L                 VEIELPVP+TLPTSAES  S+SSTW+ELY E
Sbjct: 1401 LEVHKSNQKLYLVIFSLSTLSVLRDNDAVVEIELPVPDTLPTSAESLESNSSTWLELYFE 1460

Query: 230  SVHI-------------VNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGSVTVGM 289
            SVH+             ++++ NV  G    +  DDV WLHA+FRAK AGGPGG VT  +
Sbjct: 1461 SVHVEMFCYFTNQGMSGLHLMLNV--GSVGIVRGDDVCWLHAVFRAKTAGGPGGGVTFYV 1520

Query: 290  ERRHSTLIEEWPVMWRLYPSSGCCSAGASLSRTSQW 296
            +   S+   +      L  S+   S   S + T  W
Sbjct: 1521 QASRSSTRSQ------LVSSTESSSTDPSYALTRHW 1548

[Close]
BLAST of Spg009272 vs. NCBI nr
Match: KAA0062409.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 100.1 bits (248), Expect = 3.3e-17
Identity = 54/107 (50.47%), Postives = 69/107 (64.49%), Query Frame = 0 

Query: 163 VLWCFEHLGVYKSNQKLHLVEIELPVPNTLPTSAESSRSSSSTWVELYIESVHI------ 222
           V++    L V + N    +VEIELPVP+TLPTSAESS S+SSTW+ELY ESVH+      
Sbjct: 77  VIFPLSTLSVLRDNDA--VVEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYF 136

Query: 223 -------VNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGSVT 257
                  ++++F+V  G    +  DDV WLHA+FRAK  GGPGG VT
Sbjct: 137 TNQVMSRLHLVFSVLVGSTGIVRGDDVCWLHAVFRAKTVGGPGGGVT 181

[Close]
BLAST of Spg009272 vs. ExPASy TrEMBL
Match: A0A5A7UAH6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00130 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.0e-19
Identity = 74/192 (38.54%), Postives = 95/192 (49.48%), Query Frame = 0 

Query: 132 ITKAHAKPAIAESGCKTINLWIF-----------EQTRRIS---GVLWCFEHLGVYKSNQ 191
           I K +AKPAIAESGC    L +            E TR +S   G L   + L +     
Sbjct: 23  IEKVNAKPAIAESGCNCQPLIVLFGLSYLEELRGESTRFLSKSGGFLVFSDALSILPRGN 82

Query: 192 KLHL--------VEIELPVPNTLPTSAESSRSSSSTWVELYIESVHIVNVLFNVQ----- 251
           + +L        VEIELPVP+TLPTSAESS+S+SSTW+ELY ESVH+  + +        
Sbjct: 83  RPNLHTGKLDKTVEIELPVPDTLPTSAESSKSNSSTWLELYFESVHVEMLFYKPSDVRVA 142

Query: 252 -----EGQRVSLEEDDVRWLHAIFRAKLAGGPGGSVTVGMERRHSTLIEEWPVMWRLYPS 292
                EG    +  DD+ WLHA+F AK AG PGG V      R     ++       YP+
Sbjct: 143 SYVCWEGSAGIVRGDDLCWLHAVFWAKTAGSPGGGVMPPRTSRRRRQNQD----GMQYPT 202

[Close]
BLAST of Spg009272 vs. ExPASy TrEMBL
Match: A0A5A7T7M6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002250 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-19
Identity = 63/122 (51.64%), Postives = 76/122 (62.30%), Query Frame = 0 

Query: 148  TINLWIFEQTRRISGVLWCF-------EHLGVYKSNQKLHLVEIELPVPNTLPTSAESSR 207
            T+NLW+F  +   S  L  F         L V+KSNQKL+LVEIELPVP+TL TSAESSR
Sbjct: 1650 TVNLWLFCSSTGFSSKLRGFLVFSDALSILEVHKSNQKLYLVEIELPVPDTLSTSAESSR 1709

Query: 208  SSSSTWVELYIESVHI---VNVLFNVQEGQRVSL------EEDDVRWLHAIFRAKLAGGP 254
            S+SSTW+ELY ESVH+     V+   +  Q   L        +DV WLHA+F AK AGGP
Sbjct: 1710 SNSSTWLELYFESVHVEMFCKVILQTKRCQGCILWSAGIVRGEDVCWLHAVFWAKAAGGP 1769

[Close]
BLAST of Spg009272 vs. ExPASy TrEMBL
Match: A0A5A7TKT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G004880 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.9e-18
Identity = 66/156 (42.31%), Postives = 84/156 (53.85%), Query Frame = 0 

Query: 170  LGVYKSNQKLHL-----------------VEIELPVPNTLPTSAESSRSSSSTWVELYIE 229
            L V+KSNQKL+L                 VEIELPVP+TLPTSAES  S+SSTW+ELY E
Sbjct: 1401 LEVHKSNQKLYLVIFSLSTLSVLRDNDAVVEIELPVPDTLPTSAESLESNSSTWLELYFE 1460

Query: 230  SVHI-------------VNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGSVTVGM 289
            SVH+             ++++ NV  G    +  DDV WLHA+FRAK AGGPGG VT  +
Sbjct: 1461 SVHVEMFCYFTNQGMSGLHLMLNV--GSVGIVRGDDVCWLHAVFRAKTAGGPGGGVTFYV 1520

Query: 290  ERRHSTLIEEWPVMWRLYPSSGCCSAGASLSRTSQW 296
            +   S+   +      L  S+   S   S + T  W
Sbjct: 1521 QASRSSTRSQ------LVSSTESSSTDPSYALTRHW 1548

[Close]
BLAST of Spg009272 vs. ExPASy TrEMBL
Match: A0A5D3D150 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002770 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.9e-18
Identity = 66/156 (42.31%), Postives = 84/156 (53.85%), Query Frame = 0 

Query: 170  LGVYKSNQKLHL-----------------VEIELPVPNTLPTSAESSRSSSSTWVELYIE 229
            L V+KSNQKL+L                 VEIELPVP+TLPTSAES  S+SSTW+ELY E
Sbjct: 1401 LEVHKSNQKLYLVIFSLSTLSVLRDNDAVVEIELPVPDTLPTSAESLESNSSTWLELYFE 1460

Query: 230  SVHI-------------VNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGSVTVGM 289
            SVH+             ++++ NV  G    +  DDV WLHA+FRAK AGGPGG VT  +
Sbjct: 1461 SVHVEMFCYFTNQGMSGLHLMLNV--GSVGIVRGDDVCWLHAVFRAKTAGGPGGGVTFYV 1520

Query: 290  ERRHSTLIEEWPVMWRLYPSSGCCSAGASLSRTSQW 296
            +   S+   +      L  S+   S   S + T  W
Sbjct: 1521 QASRSSTRSQ------LVSSTESSSTDPSYALTRHW 1548

[Close]
BLAST of Spg009272 vs. ExPASy TrEMBL
Match: A0A5A7V9N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G002110 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-17
Identity = 54/107 (50.47%), Postives = 69/107 (64.49%), Query Frame = 0 

Query: 163 VLWCFEHLGVYKSNQKLHLVEIELPVPNTLPTSAESSRSSSSTWVELYIESVHI------ 222
           V++    L V + N    +VEIELPVP+TLPTSAESS S+SSTW+ELY ESVH+      
Sbjct: 77  VIFPLSTLSVLRDNDA--VVEIELPVPDTLPTSAESSESNSSTWLELYFESVHVEMFCYF 136

Query: 223 -------VNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGSVT 257
                  ++++F+V  G    +  DDV WLHA+FRAK  GGPGG VT
Sbjct: 137 TNQVMSRLHLVFSVLVGSTGIVRGDDVCWLHAVFRAKTVGGPGGGVT 181

The following BLAST results are available for this feature:
BLAST of Spg009272 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0052218.12.1e-1938.54uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK0... [more]
KAA0037581.13.5e-1951.64reverse transcriptase [Cucumis melo var. makuwa][more]
KAA0042035.13.9e-1842.31DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
TYK17971.13.9e-1842.31DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0062409.13.3e-1750.47reverse transcriptase [Cucumis melo var. makuwa][more]
BLAST of Spg009272 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg009272 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UAH61.0e-1938.54CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5A7T7M61.7e-1951.64Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27... [more]
A0A5A7TKT01.9e-1842.31Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67... [more]
A0A5D3D1501.9e-1842.31Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30... [more]
A0A5A7V9N31.6e-1750.47Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold15... [more]
BLAST of Spg009272 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg009272.1Spg009272.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090304 nucleic acid metabolic process
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016740 transferase activity