Spg008950 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATGGGGAAAAAACTAGAGAGTGGTTTTCTCTGACCTTTTTGTTTATATAAATCAGGTCTCCCACATGGGTTTTTCTTGCCAAACTACAATCCCTTCCCCTTTGTGCAGATCTATTCTGTTTGTTTCCCAAGAAAACATGGCTCAGAAAACTCTTCTCTCCCTCACCTTCCTGCTTCTCTTTCTGGGTTTCTCCTTTCTCATTTCTTCTTCTGCTGTTCCCACTACAAGTAACCCTCTCTCTCTATCTCTCAATTCACTTTGATTTTCCTTTTTTTTTTTCTTCTTTCAATTTCTAATAGTTTTTTTCTAATGAATCTCTGAACTTAATTTCTTGCCTAACAGGAATCCTCAAATCAACTTTTGATCACCCATCTGCTCAAGATTTTGTTTTTCAGGTCTCTCTCTTTCTCTCTCTCTCTGTTATTCTGGAGAAAGTTTTAATTTTCTCAGCAACCAAACAGCTTTAATTTGATTGAGAAATTGAAGTGAGTTTTGATGTACAATTTTTGTAGGATGTAGGAGATTTGGAGATGGACGGTGGAGATTCATTTGATTTGGTGGAGGAAAGATTGTTTCAAGGAAGGATGGTTTTGGAGAACAATGACTATCCTGGCACAGGGGCAAACAATCACCATGATCCAAAGTCTCCTGCAAAACCTTAAGTTTTGCAAATTACTGTCGTCTTGATAACGATTTTGTTTTTTGTTTTTTGTATTTGAAGATTAAATATGTCTTTGGATCTTAACCAAATTTTTGGAATAAAGAGATTAGTTTTTGAAAATTTATTCTTTTTATTTCTATAAATTTGGTTAAGGTTTCAAAACAAAGGATTGAAAACAAAATCTATGGGATGGTTTGTAGAGATTGAAAATAGGTAAGAAGTTTATTAGAAAATTTAAGGATGGAAAGAGAAAAGAAAAGCAAAGGGCAATTCTGTCTTTTTACTCGGTGGCTTTTAGCTAGTCTCCTAATAAATGAGTGGAATGGTTCACTTTTGTGCAGAAAATTAAAATTAGTATTTGTTTGGACTTTTTCCTTTGTAATATATATACAAGTTTCTTGGCTTGATTATTATTGTATATTCTATTCAATTCACTAGTTTGTGTTGTAACTTATAGTTTAGTAATTTATTTTTTTTTTTTGGGTTAAATAAATAATTTGAGTCCTTG ATGGGTTTTTCTTGCCAAACTACAATCCCTTCCCCTTTGTGCAGATCTATTCTGTTTGTTTCCCAAGAAAACATGGCTCAGAAAACTCTTCTCTCCCTCACCTTCCTGCTTCTCTTTCTGGGTTTCTCCTTTCTCATTTCTTCTTCTGCTGTTCCCACTACAAGAATCCTCAAATCAACTTTTGATCACCCATCTGCTCAAGATTTTGTTTTTCAGGATGTAGGAGATTTGGAGATGGACGGTGGAGATTCATTTGATTTGGTGGAGGAAAGATTGTTTCAAGGAAGGATGGTTTTGGAGAACAATGACTATCCTGGCACAGGGGCAAACAATCACCATGATCCAAAGTCTCCTGCAAAACCTTAA ATGGGTTTTTCTTGCCAAACTACAATCCCTTCCCCTTTGTGCAGATCTATTCTGTTTGTTTCCCAAGAAAACATGGCTCAGAAAACTCTTCTCTCCCTCACCTTCCTGCTTCTCTTTCTGGGTTTCTCCTTTCTCATTTCTTCTTCTGCTGTTCCCACTACAAGAATCCTCAAATCAACTTTTGATCACCCATCTGCTCAAGATTTTGTTTTTCAGGATGTAGGAGATTTGGAGATGGACGGTGGAGATTCATTTGATTTGGTGGAGGAAAGATTGTTTCAAGGAAGGATGGTTTTGGAGAACAATGACTATCCTGGCACAGGGGCAAACAATCACCATGATCCAAAGTCTCCTGCAAAACCTTAA MGFSCQTTIPSPLCRSILFVSQENMAQKTLLSLTFLLLFLGFSFLISSSAVPTTRILKSTFDHPSAQDFVFQDVGDLEMDGGDSFDLVEERLFQGRMVLENNDYPGTGANNHHDPKSPAKP Homology
BLAST of Spg008950 vs. NCBI nr
Match: KAG6596972.1 (hypothetical protein SDJN03_10152, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028446.1 hypothetical protein SDJN02_09627 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 137.9 bits (346), Expect = 5.8e-29 Identity = 70/95 (73.68%), Postives = 79/95 (83.16%), Query Frame = 0
BLAST of Spg008950 vs. NCBI nr
Match: KGN59481.1 (hypothetical protein Csa_001422 [Cucumis sativus]) HSP 1 Score: 129.0 bits (323), Expect = 2.7e-26 Identity = 68/91 (74.73%), Postives = 75/91 (82.42%), Query Frame = 0
BLAST of Spg008950 vs. NCBI nr
Match: KAG7017658.1 (hypothetical protein SDJN02_19524 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 128.3 bits (321), Expect = 4.6e-26 Identity = 71/98 (72.45%), Postives = 75/98 (76.53%), Query Frame = 0
BLAST of Spg008950 vs. NCBI nr
Match: KAG6580910.1 (hypothetical protein SDJN03_20912, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 127.5 bits (319), Expect = 7.9e-26 Identity = 71/98 (72.45%), Postives = 74/98 (75.51%), Query Frame = 0
BLAST of Spg008950 vs. NCBI nr
Match: KAA0053852.1 (hypothetical protein E6C27_scaffold135G002430 [Cucumis melo var. makuwa]) HSP 1 Score: 122.5 bits (306), Expect = 2.5e-24 Identity = 67/92 (72.83%), Postives = 75/92 (81.52%), Query Frame = 0
BLAST of Spg008950 vs. ExPASy TrEMBL
Match: A0A0A0LHJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822320 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.3e-26 Identity = 68/91 (74.73%), Postives = 75/91 (82.42%), Query Frame = 0
BLAST of Spg008950 vs. ExPASy TrEMBL
Match: A0A5A7UDI6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G002430 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.2e-24 Identity = 67/92 (72.83%), Postives = 75/92 (81.52%), Query Frame = 0
BLAST of Spg008950 vs. ExPASy TrEMBL
Match: A0A5B6ZB32 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_010781 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 7.7e-19 Identity = 59/110 (53.64%), Postives = 74/110 (67.27%), Query Frame = 0
BLAST of Spg008950 vs. ExPASy TrEMBL
Match: A0A6P3YVB6 (uncharacterized protein LOC107405246 OS=Ziziphus jujuba OX=326968 GN=LOC107405246 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 1.1e-17 Identity = 54/97 (55.67%), Postives = 69/97 (71.13%), Query Frame = 0
BLAST of Spg008950 vs. ExPASy TrEMBL
Match: A0A6A6KJS2 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_004666 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 1.1e-17 Identity = 57/97 (58.76%), Postives = 68/97 (70.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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