Spg008879 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAACCAAGCTGCACATAGGTCAGCGCAAGACCAAGGTCATTACTCTTAAATCGGGCTTAAGGAGCTCAACCTATAGCGATAAGTCACCTTGAATCCCAATTCAAGAGTGGGGGCTTAATGTTATAGGTAATTCTGGACCACCATGGTGTACAAGGAGCTGACGAGGACAACCGGGCGGAGATGGGACCAGGAGACGACCCAGAGGAAGACCGGACCAACGGGCCGGGCCAACGTGGCCCGACCCGTACGGTCGGCCCGCTTGCGCGGGCCGAGTCTGTTTGCCTCAGCTCGGTCCCCCCTGCCTCTGGCCGCCCTAGTTCCGCTTGGCTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGAAGCATGAGCAGGTATTTATACCCCTCTTCGCCGCTGAAGAAGGGGACCCGAACTCTCGACTCTCTCCTCTTACTCTCTTGCTCTCCTCTTCCGTTTTCTGACTTAAGCATCAGAGGCGGTGTGGCTAGCACCACACCAGTGTGTAGGTTTTCTTTCTTTTGCAGGCCACGTCTTCCCCCGCTCTCAAACAAATTCACTGTCGATTATCACGTGGAGCGAAGGTAATTTACCTAGCGAAATTTGATCATCAACAGAATCATAAAATATATGTTTGATAGGAAATTGATGGAGCTTTAGAGAAAAATAATATTAAAGCTACTTTTTGTTGATTTTTGTTTAAATACTTTTTAGACACTTATTCAATAATTGATCTTGTGTATTAATGGAAATATAATTTGTGGGAACTGAAAGATAAAAATCGTAATACTTTGTAAGTGCAGAGTTTAAATTGATGAAACTGAAGGTTTAAGATGAAAATTGGATATATTTGATCAATTTTAGGGGGTAAAACTTGATTTTTTTTCCCTAAATAAATTATATAATGAGATGATATCCAACCAATATGGTAATGTACATATAAATGAAGAATTAGGTGACATATAGATAAAACGGTTGAAAGAAAAGGTGATTTTTTAAAAAAAACAAAGAAAAAGGTGATTGGAAAAACATTTTTATAACATAAATGTGTATAGGAATATAATTGAATTATTACAATAAAATTCTTAAATACTGAACCTTACTACAAAGGTTAATTAAAAAATGCATACATAAAATATAAAAAATAATAATCAAAATATGATCAATAGTTTAGGCCCAATTTGATAATCATTTGATTTTTTGTTTTTGATTTTTAAAAATTAAATTTATAAACATTACTTTTTTTTTTATCAATAAAGTTTATAAACATTACTTCTACTTATAAGTTTTTTTTTTTAACATCTTCTCCCATGTTTTAAAAAACCAAATCAATTTTGTAAACTAAAAAATAGTAGTTTTCAAAAAGAAAAATAAAATTTGGTTATAAATTAAAACGTGTCGTTGACAAATATGAAAACTATGGTAAGGAAATTGAGACAAAACAAGCATAATTTTAAAAAACTAAAAACTAAAAATCAAATAGGATTCAAAGGGGCCTTATATATGAACAAAACTTGGTTGTATACCGGTATGCCCCATTAAAATCTTGACAATTACCAAAGAGGAAGGGAGAAAATGAGAATTTTTTTTTAAATGAGAATTTTTTTTTATCTCTCCTAGTTGTCAAGATTTTAATGGTGGTATGCAGGGAGATCCCTACATACCGGTATGCAGCCAAGTTTTTTCCTATTTATATATAGTTAAGGAAAAAACTTGGCTGCATACCGGTGGGTAGTGGGTAGGGATCTCCCTGCATACCCCATTAAAATCTTGACAACTAAGAAAGAAGAAAGTAAAAAGTGATAACTTTTTTTTGTATCTCTCTTAGTTGTCAAGATTTTAATGGTGGTATGTAGGGAGATTCCTACCCACCGGTATGTAGCCAAGTTTTTTCCTATAGTTAATTGATGTGGAGAAGGATAAAACAACCATGGAATATGGAAAGAGTGTAATAAAATATATAGAATGATCATTTATATAATTTCTTTCGAAATGTAGTCGTTTCTTAATAAAGAATCACGTAGTTGAATATTAATAGAGGGAGTAAATATTATAATATAATATATTGAAATTTTTTCTCGGGGATTGCCTACTGCCGCAATCGAGTGATTGGGAGGAGCGCTGTGTATGGAGTCCGCCTCCTGCTAGGAAGCTGAAACTTAATGTTGATGCTTCTGTCAGGCCTGATACAGGGGAAGCGGGGGATGGTTGTGTGCTGCGTGGGGCTGATGGTGAGGTATTTATGGCCGCCTGTTTGGAACTACAGAGGTGTTGGAGCGTGGATTTGGCTGAGGGATGGACTGTGTATAAAGAGGTCCAACTTGCTCGGCAGTTGGGGTTTGCGGAGTTTGTGGTAGAGACTGACTCGCTGAGGTTGGTCAAAATCCTCCATGGCGATCTGCATGATGTTTCAGAAGTGGGGCTGCTAATGGATGACATTCGAGGGATTCTCCACCCTTGGGACAACGGTAAGGTTTTGTTTACATTACGCCAGGGAAACAAGGTGGCGCATGTTCTGGGTAGTTTGGCCTTTTCATATGTTGACCGTGTTTGGCTTGAAGAGTGGCCCAGCGAAATCTCGGATGTCCTGAGGGGTGATGTTGTTTCAGCTGCGTGA ATGACAACCAAGCTGCACATAGGTCAGCGCAAGACCAAGGTAATTCTGGACCACCATGGTGTACAAGGAGCTGACGAGGACAACCGGGCGGAGATGGGACCAGGAGACGACCCAGAGGAAGACCGGACCAACGGGCCGGGCCAACGTGGCCCGACCCGTACGGTCGGCCCGCTTGCGCGGGCCGAGTCTGTTTGCCTCAGCTCGGTCCCCCCTGCCTCTGGCCGCCCTAGTTCCGCTTGGCTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGAAGCATGAGCAGGTATTTATACCCCTCTTCGCCGCTGAAGAAGGGGACCCGAACTCTCGACTCTCTCCTCTTACTCTCTTGCTCTCCTCTTCCGTTTTCTGACTTAAGCATCAGAGGCGGTGTGGCTAGCACCACACCAGTGTGTAGGTTTTCTTTCTTTTGCAGGCCACGTCTTCCCCCGCTCTCAAACAAATTCACTGTCGATTATCACGTGGAGCGAAGGCCTGATACAGGGGAAGCGGGGGATGGTTGTGTGCTGCGTGGGGCTGATGGTGAGGTATTTATGGCCGCCTGTTTGGAACTACAGAGGTGTTGGAGCGTGGATTTGGCTGAGGGATGGACTGTGTATAAAGAGGTCCAACTTGCTCGGCAGTTGGGGTTTGCGGAGTTTGTGGTAGAGACTGACTCGCTGAGGTTGGTCAAAATCCTCCATGGCGATCTGCATGATGTTTCAGAAGTGGGGCTGCTAATGGATGACATTCGAGGGATTCTCCACCCTTGGGACAACGGTAAGGTTTTGTTTACATTACGCCAGGGAAACAAGGTGGCGCATGTTCTGGGTAGTTTGGCCTTTTCATATGTTGACCGTGTTTGGCTTGAAGAGTGGCCCAGCGAAATCTCGGATGTCCTGAGGGGTGATGTTGTTTCAGCTGCGTGA ATGACAACCAAGCTGCACATAGGTCAGCGCAAGACCAAGGTAATTCTGGACCACCATGGTGTACAAGGAGCTGACGAGGACAACCGGGCGGAGATGGGACCAGGAGACGACCCAGAGGAAGACCGGACCAACGGGCCGGGCCAACGTGGCCCGACCCGTACGGTCGGCCCGCTTGCGCGGGCCGAGTCTGTTTGCCTCAGCTCGGTCCCCCCTGCCTCTGGCCGCCCTAGTTCCGCTTGGCTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGAAGCATGAGCAGGTATTTATACCCCTCTTCGCCGCTGAAGAAGGGGACCCGAACTCTCGACTCTCTCCTCTTACTCTCTTGCTCTCCTCTTCCGTTTTCTGACTTAAGCATCAGAGGCGGTGTGGCTAGCACCACACCAGTGTGTAGGTTTTCTTTCTTTTGCAGGCCACGTCTTCCCCCGCTCTCAAACAAATTCACTGTCGATTATCACGTGGAGCGAAGGCCTGATACAGGGGAAGCGGGGGATGGTTGTGTGCTGCGTGGGGCTGATGGTGAGGTATTTATGGCCGCCTGTTTGGAACTACAGAGGTGTTGGAGCGTGGATTTGGCTGAGGGATGGACTGTGTATAAAGAGGTCCAACTTGCTCGGCAGTTGGGGTTTGCGGAGTTTGTGGTAGAGACTGACTCGCTGAGGTTGGTCAAAATCCTCCATGGCGATCTGCATGATGTTTCAGAAGTGGGGCTGCTAATGGATGACATTCGAGGGATTCTCCACCCTTGGGACAACGGTAAGGTTTTGTTTACATTACGCCAGGGAAACAAGGTGGCGCATGTTCTGGGTAGTTTGGCCTTTTCATATGTTGACCGTGTTTGGCTTGAAGAGTGGCCCAGCGAAATCTCGGATGTCCTGAGGGGTGATGTTGTTTCAGCTGCGTGA MTTKLHIGQRKTKVILDHHGVQGADEDNRAEMGPGDDPEEDRTNGPGQRGPTRTVGPLARAESVCLSSVPPASGRPSSAWLVPKRLRIPKNPRSMSRYLYPSSPLKKGTRTLDSLLLLSCSPLPFSDLSIRGGVASTTPVCRFSFFCRPRLPPLSNKFTVDYHVERRPDTGEAGDGCVLRGADGEVFMAACLELQRCWSVDLAEGWTVYKEVQLARQLGFAEFVVETDSLRLVKILHGDLHDVSEVGLLMDDIRGILHPWDNGKVLFTLRQGNKVAHVLGSLAFSYVDRVWLEEWPSEISDVLRGDVVSAA Homology
BLAST of Spg008879 vs. NCBI nr
Match: XP_022150944.1 (uncharacterized protein LOC111018973 [Momordica charantia]) HSP 1 Score: 104.4 bits (259), Expect = 1.8e-18 Identity = 64/167 (38.32%), Postives = 88/167 (52.69%), Query Frame = 0
BLAST of Spg008879 vs. NCBI nr
Match: XP_030970599.1 (uncharacterized protein LOC115990979 [Quercus lobata]) HSP 1 Score: 90.5 bits (223), Expect = 2.7e-14 Identity = 55/159 (34.59%), Postives = 82/159 (51.57%), Query Frame = 0
BLAST of Spg008879 vs. NCBI nr
Match: XP_021716820.1 (uncharacterized protein LOC110684687 [Chenopodium quinoa]) HSP 1 Score: 87.4 bits (215), Expect = 2.3e-13 Identity = 50/143 (34.97%), Postives = 77/143 (53.85%), Query Frame = 0
BLAST of Spg008879 vs. NCBI nr
Match: KAF7802400.1 (uncharacterized protein G2W53_041511 [Senna tora]) HSP 1 Score: 87.0 bits (214), Expect = 3.0e-13 Identity = 47/158 (29.75%), Postives = 84/158 (53.16%), Query Frame = 0
BLAST of Spg008879 vs. NCBI nr
Match: TXG72479.1 (hypothetical protein EZV62_001058 [Acer yangbiense]) HSP 1 Score: 87.0 bits (214), Expect = 3.0e-13 Identity = 49/156 (31.41%), Postives = 78/156 (50.00%), Query Frame = 0
BLAST of Spg008879 vs. ExPASy TrEMBL
Match: A0A6J1DBJ7 (uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018973 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 8.9e-19 Identity = 64/167 (38.32%), Postives = 88/167 (52.69%), Query Frame = 0
BLAST of Spg008879 vs. ExPASy TrEMBL
Match: A0A5C7ITL2 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001058 PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.5e-13 Identity = 49/156 (31.41%), Postives = 78/156 (50.00%), Query Frame = 0
BLAST of Spg008879 vs. ExPASy TrEMBL
Match: V4UMR3 (RNase H domain-containing protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10027161mg PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.6e-12 Identity = 50/156 (32.05%), Postives = 82/156 (52.56%), Query Frame = 0
BLAST of Spg008879 vs. ExPASy TrEMBL
Match: A0A2N9HF86 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38265 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.6e-12 Identity = 60/203 (29.56%), Postives = 91/203 (44.83%), Query Frame = 0
BLAST of Spg008879 vs. ExPASy TrEMBL
Match: A0A2I4H8L7 (uncharacterized protein LOC109014467 OS=Juglans regia OX=51240 GN=LOC109014467 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.1e-12 Identity = 50/157 (31.85%), Postives = 75/157 (47.77%), Query Frame = 0
BLAST of Spg008879 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 45.4 bits (106), Expect = 9.4e-05 Identity = 35/117 (29.91%), Postives = 55/117 (47.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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