Spg008858 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008858
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein STAY-GREEN LIKE, chloroplastic
Location	scaffold10: 35799453 .. 35802873 (+)
RNA-Seq Expression	Spg008858
Synteny	Spg008858

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACGGTGGCTGTTGGTCGGCGACAGACGGTAGTCGAAGGTCGATGGAGGTGGTCGGTCGGCGACAGCCGTGACAATGACGACTGGTCTGCGGAGGTTGGCGGCGACCGGTAGTCAGAGATCGGCGGAGGTGATAAAAAAAGGAAAAATGTAAGAAATAACATAAATAATAAAAAAAAATGAAAGAGAAAGAAATAAAGAAAAAAGAAAAAAAAATTTAAAAAAACGAGGAAATGGTTAAAAAATAGAGGAAGAGAAGAGATTGGTGTAGGAATGAGAGGGAGAGATGGATACATCCATGAAAGATAGGAAAAAAAAAACAGAAACGGAATTTGAGAAATAACTTTTTGTAGTTTCTCAAATTTGATCTCTTTTTTATAAACGTTTCTAGAAATTTAGAAACAAGAAACATAGATGACTTATCAAACAAGTATGTTTCTTGAAAAAGGAGAAACGGGAACAAGAAACAGGAAACGAAAACGTTATCAATCGAGCCCTTAATTTCTGAGTTTTCACGAATAGGTGTGTTTGGTCCATAAATTTCAAAATCTACGTTTTTAGTTTGAAGTTTTATGAAATGTGTTTAAAAGATCCTTTAACATTAATTTAGTAATTTTTAGTATTTTTAATGATGACAGGGGAAATAAAAAGAAATAAATAAAGAAGTTAATTTTCCCAATATTCTTTATGATTGATTAAACAACTTTATGAAATAATACCGAAAATAAAGATATACCGTGCAAAACTGCACAATGAGTACGTGTAAACGCTCATCGTTAGCCACGTCAGCACATTATCCACAAGTTATCAAAGAATGTACCGGAGACGATGACATGTCACATATTTCAAAATCCTCAACCAATCAAAAAAATTTTAGCCTCACCTTTTTTTTTAATTGAAAATATTAGAAAGAAAGATCAATGTGTGTGGAGGGAGATCGGTGGCCTCAGATTCTGGTCCAACGAAGCGTCTTTGAATCACTGTCCACATGACCGAAAAGAAAGAAACTCTGAACCCCATTTCTCCACATCCAAGAGAGACGAGAATGGTGGGTTCTGATTCTGAAAGATGAAGGTGAAGAAGAAGACCCGTAAGTTGTTATGCGTCTTCCATGGCCTTTCATTGTGCTCGTTACTCTTTTTCTCCATCGCCAGGCAAAACCAAGTTCAAATTTGTGCAGAGGAACAAGCCTGCGGTTCTGTTTTCTTCCCTTCCTACCACTCGAGCTTCTTACAATAGACTAGTCTCTGAGGTACCATCTCTACTTCTTTCGATTTGATTTTGGTTGATGTGGGTTATGGCATTACTGCATTTTTGTTAATTGGAGACTGATTCAAGTTCAGTAGGTTGAAGTTGTGAGTTAGATTGAAGGGATTTGTGGGTGTACGGAGTTTTCCCAATCTGATTTTGATTGCATTTTGTATTGAAAATCTTTGTGTTGAAGGCTGAGAAAGATAAGGATTCTGTTGTTGAATTTTGGGTTTGGTCGAGATTGTAAGTGTAATTTTGCGGAAAAAACTAATTGCAAGATTTGTGTGTTTCGTGTTGATTCTAACTTCTGGCTTGCATTCTTGTTTCATTGCCTAAAATTCTCGATGATGAACGAAAAATGTGTTGCTGGATTTTCGGTATGCAATGTACATTATAATGCTTCTGCAAATAAGCTAAGAAGTTCAGCAGTTAAGTCACTATTGTGTATTATATCTGCTGGATAATGTACACAGAATCCTTGATTATTATCTTGTTCTTTGTTTAGTTGGTTCCTTCGAAGGAAGTTTTTTGTTGAATGAAGTTCAGTTTCAAGCCTTGTTTGGTGGTTTAAACAATTATCGAATCAAAGGAACCAAAAAGCAAAAAGTTTTTTGCCTGTTTTTTCTGTCAAATTTGTCACTCTGTCTTATGATGCATTTGTCTTTGGTAGGCTGTTAGGATACTGGTTCCTCCAGCAAGATTTGAAGCTTCAAAGTTAAAAGTTGTATTCACTAGGGAGGTGAACAAGTCTGCAGGAATCATCCCAAGAACATATATACTATCTCACTGTGACTTCACTGCTAATCTCACCTTAACCATCTCTGATGTTATCAACCTTGATCAGGTACAAATTTATTGAGACTTTATTCTCTGAGTGGAACAACACATTGTTCTGTTCTTCTCATTTTTGGGTGTGTGAATGTATGCAGTTGAGAGGGTGGTACAACAAGGATGATGTGGTTGCTGAGTGGAAGAAAGTGAAGGATGAAATGTGTCTTCATGTACATTGCTATGTGAGCGGTCCTAATTCTTTGCTTGACCTTACTGCAGAGTTTAGATACCACATATTCTCCAAAGAATTGCCTCTTGTAAGTTTTTCTTTTCCTATGTCTCAAAATGTTTCACTTTCATTGCAATATAATTGATTTCCGAATTTTTTAGGAAGAATTATTCAATGCAGCTGTCATATAGTCACATCCTAAATCCTTGGATACATACTGAAATTGTAATTTTCAGCTCCTCTCCAATATCTAACAGCATAAAACCGTCAGCCACATTTACCAGCCTCTGTGAATAATTTCTCATTGTCTAGACATTATTTTTGGTGTTTAACATGGAACAACATCTGCCCTCCAAATTTCCATAAACAGAAGATATAGAACTTCCCATTTGTCTACATTCACAGTCATAAAACAGAAAAAACTCCTTAGCTGTTGGAGAACTCTTCAGATCTGACCTATGATGATGGAAGTGGCATAGCATAGCAATGGTTAAGATTGGTACAAGACTAAAGGCCTCTGTTTTTTTGTAAAACAGGTGCTTGAATCTGTCCTATATGGAGATTCAATTTTATTTGGGGAGAATCCTGAGCTGCTAGATGCCTTAGTCAGGGTATATTTTCATTCCGGTTCACAAAAGTACAATCGACTAGAATGCTGGGGGCCACTCAAGGATGCTGTACTGGTAAACTCCATAACATTTTATGAAAATTTTCATTGAATTCTACTTGATCTAGACAACTTGATGCCTTCCTTTTCAATCTTTTCTTTTGCTTGCATTCTCAGGGGAGGCATCATCATATGCAAGGGCGCAAGGATGTGTCTTCTCCTAACAAGTTGAGAAGCCCCAGATCCATCTTTCAAGCTCTCTTTGCTTTCCTTCTCTGATCTGCATATTGCATAAACTGGTAAATGCTAATCTCCAAGAAATAGCTGTCTTTTCAAGTTTTAACATCCATTTAATGCAATTCCTTTGTGGAAGGAGCAAAAGAGTACTCTTGTTTTGTTGAATATTTGAGTCACTCTTTGCTATGGGAGGGAGGGAAGTAATTCTGTGGGTCAGTTTATTCTTTGACCAAAGAAAGGCATATTTGTTCCTACAATTCTTGTGTAAATGAGAACAATTTCCTTGAAGAATTGTTTGGTGGCTAATCTGCATCTTTATCCTT

mRNA sequence

ATGGCCTTTCATTGTGCTCGTTACTCTTTTTCTCCATCGCCAGGCAAAACCAAGTTCAAATTTGTGCAGAGGAACAAGCCTGCGGTTCTGTTTTCTTCCCTTCCTACCACTCGAGCTTCTTACAATAGACTAGTCTCTGAGGCTGAGAAAGATAAGGATTCTGTTGTTGAATTTTGGGCTGTTAGGATACTGGTTCCTCCAGCAAGATTTGAAGCTTCAAAGTTAAAAGTTGTATTCACTAGGGAGGTGAACAAGTCTGCAGGAATCATCCCAAGAACATATATACTATCTCACTGTGACTTCACTGCTAATCTCACCTTAACCATCTCTGATGTTATCAACCTTGATCAGTTGAGAGGGTGGTACAACAAGGATGATGTGGTTGCTGAGTGGAAGAAAGTGAAGGATGAAATGTGTCTTCATGTACATTGCTATGTGAGCGGTCCTAATTCTTTGCTTGACCTTACTGCAGAGTTTAGATACCACATATTCTCCAAAGAATTGCCTCTTGTGCTTGAATCTGTCCTATATGGAGATTCAATTTTATTTGGGGAGAATCCTGAGCTGCTAGATGCCTTAGTCAGGGTATATTTTCATTCCGGTTCACAAAAGTACAATCGACTAGAATGCTGGGGGCCACTCAAGGATGCTGTACTGGGGAGGCATCATCATATGCAAGGGCGCAAGGATGTGTCTTCTCCTAACAAGTTGAGAAGCCCCAGATCCATCTTTCAAGCTCTCTTTGCTTTCCTTCTCTGA

Coding sequence (CDS)

ATGGCCTTTCATTGTGCTCGTTACTCTTTTTCTCCATCGCCAGGCAAAACCAAGTTCAAATTTGTGCAGAGGAACAAGCCTGCGGTTCTGTTTTCTTCCCTTCCTACCACTCGAGCTTCTTACAATAGACTAGTCTCTGAGGCTGAGAAAGATAAGGATTCTGTTGTTGAATTTTGGGCTGTTAGGATACTGGTTCCTCCAGCAAGATTTGAAGCTTCAAAGTTAAAAGTTGTATTCACTAGGGAGGTGAACAAGTCTGCAGGAATCATCCCAAGAACATATATACTATCTCACTGTGACTTCACTGCTAATCTCACCTTAACCATCTCTGATGTTATCAACCTTGATCAGTTGAGAGGGTGGTACAACAAGGATGATGTGGTTGCTGAGTGGAAGAAAGTGAAGGATGAAATGTGTCTTCATGTACATTGCTATGTGAGCGGTCCTAATTCTTTGCTTGACCTTACTGCAGAGTTTAGATACCACATATTCTCCAAAGAATTGCCTCTTGTGCTTGAATCTGTCCTATATGGAGATTCAATTTTATTTGGGGAGAATCCTGAGCTGCTAGATGCCTTAGTCAGGGTATATTTTCATTCCGGTTCACAAAAGTACAATCGACTAGAATGCTGGGGGCCACTCAAGGATGCTGTACTGGGGAGGCATCATCATATGCAAGGGCGCAAGGATGTGTCTTCTCCTAACAAGTTGAGAAGCCCCAGATCCATCTTTCAAGCTCTCTTTGCTTTCCTTCTCTGA

Protein sequence

MAFHCARYSFSPSPGKTKFKFVQRNKPAVLFSSLPTTRASYNRLVSEAEKDKDSVVEFWAVRILVPPARFEASKLKVVFTREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDALVRVYFHSGSQKYNRLECWGPLKDAVLGRHHHMQGRKDVSSPNKLRSPRSIFQALFAFLL

Homology

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BLAST of Spg008858 vs. NCBI nr
Match: XP_022141380.1 (protein STAY-GREEN LIKE, chloroplastic [Momordica charantia])

HSP 1 Score: 446.4 bits (1147), Expect = 1.6e-121
Identity = 223/256 (87.11%), Postives = 229/256 (89.45%), Query Frame = 0


Query: 1   MAFHCARYSFSPSPGKTKFKFVQRNKPAVLFSSLPTTRASYNRLVSEAEKDKDSVVEFWA 60
           MAFHCARYSFSPSPGK KFK V R+ PAVLFSSL TTRASY+ LVSE            A
Sbjct: 1   MAFHCARYSFSPSPGKPKFKLVHRSNPAVLFSSLRTTRASYSTLVSE------------A 60

Query: 61  VRILVPPARFEASKLKVVFTREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 120
           VRILVPPARFEASKLKVV TRE+NKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG
Sbjct: 61  VRILVPPARFEASKLKVVLTRELNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 120

Query: 121 WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDS 180
           WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDL AEFRYHIFSKELPLVLESVLYGDS
Sbjct: 121 WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDS 180

Query: 181 ILFGENPELLDALVRVYFHSGSQKYNRLECWGPLKDAVLGRHHHMQ----GRKDVSSPNK 240
           +LFGENPELLDALVRVYFHS SQKYNRLECWGPLKDAVLGRHHHMQ    G KD+SSP K
Sbjct: 181 VLFGENPELLDALVRVYFHSSSQKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDMSSPKK 240

Query: 241 LRSPRSIFQALFAFLL 253
           LRSP+SIFQALFAFLL
Sbjct: 241 LRSPKSIFQALFAFLL 244

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BLAST of Spg008858 vs. NCBI nr
Match: XP_038884235.1 (magnesium dechelatase SGRL, chloroplastic [Benincasa hispida])

HSP 1 Score: 446.4 bits (1147), Expect = 1.6e-121
Identity = 222/256 (86.72%), Postives = 227/256 (88.67%), Query Frame = 0


Query: 1   MAFHCARYSFSPSPGKTKFKFVQRNKPAVLFSSLPTTRASYNRLVSEAEKDKDSVVEFWA 60
           MAFHC RYSFSPSPGK  FK VQRN P +LFSS PTTRASYN LVSE            A
Sbjct: 1   MAFHCVRYSFSPSPGKPNFKLVQRNNPVLLFSSFPTTRASYNTLVSE------------A 60

Query: 61  VRILVPPARFEASKLKVVFTREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 120
           VRILVPPARFEASKLKVVF+REVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG
Sbjct: 61  VRILVPPARFEASKLKVVFSREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 120

Query: 121 WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDS 180
           WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLD+ AEFRYHIFSKELPLVLESVLYGDS
Sbjct: 121 WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDVAAEFRYHIFSKELPLVLESVLYGDS 180

Query: 181 ILFGENPELLDALVRVYFHSGSQKYNRLECWGPLKDAVLGRHHHMQ----GRKDVSSPNK 240
           ILFGENPELLDALVRVYFHS S KYNRLECWGPLKDAVLGRHHH+Q    G KDVSSP K
Sbjct: 181 ILFGENPELLDALVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHVQGLLRGSKDVSSPKK 240

Query: 241 LRSPRSIFQALFAFLL 253
           LRSP+SIFQALFAFLL
Sbjct: 241 LRSPKSIFQALFAFLL 244

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BLAST of Spg008858 vs. NCBI nr
Match: XP_022960677.1 (protein STAY-GREEN LIKE, chloroplastic [Cucurbita moschata] >XP_023546959.1 protein STAY-GREEN LIKE, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG6602142.1 Magnesium dechelatase SGRL, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032831.1 Protein STAY-GREEN LIKE, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 437.6 bits (1124), Expect = 7.4e-119
Identity = 221/256 (86.33%), Postives = 225/256 (87.89%), Query Frame = 0


Query: 1   MAFHCARYSFSPSPGKTKFKFVQRNKPAVLFSSLPTTRASYNRLVSEAEKDKDSVVEFWA 60
           MAFHCARYSFSPSP K KFK V  NKPAVLFSSL +TRASYN LVSE            A
Sbjct: 1   MAFHCARYSFSPSPSKPKFKLVLGNKPAVLFSSLRSTRASYNTLVSE------------A 60

Query: 61  VRILVPPARFEASKLKVVFTREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 120
           VRILVPPARFEASKLKV FTREVNK AGI PRTYILSHCDFTANLTLTISDVINLDQLRG
Sbjct: 61  VRILVPPARFEASKLKVEFTREVNKCAGITPRTYILSHCDFTANLTLTISDVINLDQLRG 120

Query: 121 WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDS 180
           WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDS
Sbjct: 121 WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDS 180

Query: 181 ILFGENPELLDALVRVYFHSGSQKYNRLECWGPLKDAVLGRHHHMQG----RKDVSSPNK 240
           ILF ENPELLDALVRVYFHS SQKYNRLECWGPLKDAV GRHHHMQG     +DVSSP K
Sbjct: 181 ILFRENPELLDALVRVYFHSSSQKYNRLECWGPLKDAVQGRHHHMQGLLRASQDVSSPKK 240

Query: 241 LRSPRSIFQALFAFLL 253
           LR+P+SIFQALFAFLL
Sbjct: 241 LRTPKSIFQALFAFLL 244

[Close]

BLAST of Spg008858 vs. NCBI nr
Match: XP_022989801.1 (protein STAY-GREEN LIKE, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 436.0 bits (1120), Expect = 2.2e-118
Identity = 220/256 (85.94%), Postives = 224/256 (87.50%), Query Frame = 0


Query: 1   MAFHCARYSFSPSPGKTKFKFVQRNKPAVLFSSLPTTRASYNRLVSEAEKDKDSVVEFWA 60
           MAFHCARYSFSPSP K KFK V  NKP VLFSSL +TRASYN LVSE            A
Sbjct: 1   MAFHCARYSFSPSPSKPKFKLVLGNKPVVLFSSLRSTRASYNTLVSE------------A 60

Query: 61  VRILVPPARFEASKLKVVFTREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 120
           VRILVPPARFEASKLKV FTREVNK AGI PRTYILSHCDFTANLTLTISDVINLDQLRG
Sbjct: 61  VRILVPPARFEASKLKVEFTREVNKCAGITPRTYILSHCDFTANLTLTISDVINLDQLRG 120

Query: 121 WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDS 180
           WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDS
Sbjct: 121 WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDS 180

Query: 181 ILFGENPELLDALVRVYFHSGSQKYNRLECWGPLKDAVLGRHHHMQG----RKDVSSPNK 240
           ILF ENPELLDALVRVYFHS SQKYNRLECWGPLKDAV GRHHHMQG     +DVSSP K
Sbjct: 181 ILFRENPELLDALVRVYFHSSSQKYNRLECWGPLKDAVQGRHHHMQGLLRASQDVSSPKK 240

Query: 241 LRSPRSIFQALFAFLL 253
           LR+P+SIFQALFAFLL
Sbjct: 241 LRTPKSIFQALFAFLL 244

[Close]

BLAST of Spg008858 vs. NCBI nr
Match: XP_004144252.1 (magnesium dechelatase SGRL, chloroplastic [Cucumis sativus] >KGN47507.1 hypothetical protein Csa_019065 [Cucumis sativus])

HSP 1 Score: 428.7 bits (1101), Expect = 3.4e-116
Identity = 215/256 (83.98%), Postives = 221/256 (86.33%), Query Frame = 0


Query: 1   MAFHCARYSFSPSPGKTKFKFVQRNKPAVLFSSLPTTRASYNRLVSEAEKDKDSVVEFWA 60
           MA HC RYSFSPSP K  FK VQRN PA+LFSS  TT ASYN LVSE            A
Sbjct: 1   MALHCVRYSFSPSPAKPNFKLVQRNNPALLFSSFSTTPASYNTLVSE------------A 60

Query: 61  VRILVPPARFEASKLKVVFTREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 120
           VRILVPPARFEASKLKVVF+REV KSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG
Sbjct: 61  VRILVPPARFEASKLKVVFSREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 120

Query: 121 WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDS 180
           WYNKDDVVAEWKKVKDEMCLHVHCYVSGP+SLLD+ AEFRYHIFSKELPLVLESVLYGDS
Sbjct: 121 WYNKDDVVAEWKKVKDEMCLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLYGDS 180

Query: 181 ILFGENPELLDALVRVYFHSGSQKYNRLECWGPLKDAVLGRHHHMQ----GRKDVSSPNK 240
           ILFGENPELLD+LVRVYFHS S KYNRLECWGPLKDAVLGRHHHMQ    G KDVS   K
Sbjct: 181 ILFGENPELLDSLVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLSGSKDVSPSKK 240

Query: 241 LRSPRSIFQALFAFLL 253
           LRSP+SIFQALFAFLL
Sbjct: 241 LRSPKSIFQALFAFLL 244

[Close]

BLAST of Spg008858 vs. ExPASy Swiss-Prot
Match: Q94AQ9 (Magnesium dechelatase SGRL, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SGRL PE=1 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.9e-69
Identity = 139/226 (61.50%), Postives = 164/226 (72.57%), Query Frame = 0


Query: 32  SSLPTTRASYNRLVSEAEKDKDSVVEFWAVRILVPPARFEASKLKVVFTREV--NKSAG- 91
           S++     SYN LVSE            AVR+LVP A F++SKLKV F  E+  NKS G 
Sbjct: 47  SAISDGGVSYNTLVSE------------AVRLLVPQANFDSSKLKVEFLGELLENKSNGG 106

Query: 92  -IIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWKKVKDEMCLHVHCYVS 151
            I PRTYILSHCDFTANLTLTIS+VINLDQL GWY KDDVVAEWKKV DE+ LH+HC VS
Sbjct: 107 IITPRTYILSHCDFTANLTLTISNVINLDQLEGWYKKDDVVAEWKKVNDELRLHIHCCVS 166

Query: 152 GPNSLLDLTAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDALVRVYFHSGSQKYNR 211
           G + L D+ AE RYHIFSKELPLVL++V++GDS++F ENPEL+DA V VYFHS + KYNR
Sbjct: 167 GMSLLQDVAAELRYHIFSKELPLVLKAVVHGDSVMFRENPELMDAYVWVYFHSSTPKYNR 226

Query: 212 LECWGPLKDAVLGRHH-HMQGRKDVSSPNKLRSPRSIFQALFAFLL 253
           +ECWGPLKDA  G+   + QG    ++  KL   +SIF  LF FLL
Sbjct: 227 IECWGPLKDAAKGKQQGNHQGFLSSTTSRKLIRHKSIFHTLFTFLL 260

[Close]

BLAST of Spg008858 vs. ExPASy Swiss-Prot
Match: Q0J8Q3 (Protein STAY-GREEN LIKE, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0692600 PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.0e-46
Identity = 110/243 (45.27%), Postives = 144/243 (59.26%), Query Frame = 0


Query: 28  AVLFSSLPT----TRASYNRLVSEAEKD-KDSVVEFWAVRILVPPARFEASKLKVVFTRE 87
           A+ FSS       +R+ + R+    +    D +    A ++L PP  F+A KL V F   
Sbjct: 19  ALCFSSAAAARSRSRSRHGRMAVSCDAGASDLLYSSLAAKLLGPPTSFDAGKLTVEFAHS 78

Query: 88  VNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWKKVKDE--MCL 147
              S+   PR Y L+HCDFTANLTL +SD I  D+       DDV AEWK+ + +  M L
Sbjct: 79  HGNSSSGFPRAYTLTHCDFTANLTLAVSDTIAADRR---LRADDVFAEWKQQQQQEGMAL 138

Query: 148 HVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDALVRVYFHS 207
           HVHC+VSG N L  L A FRY++FSKELPLVL++V++GD++LF E PELL+A V V+FHS
Sbjct: 139 HVHCFVSGANLLHGLAAGFRYYVFSKELPLVLKAVVHGDALLFAEQPELLEAKVWVHFHS 198

Query: 208 GSQ-KYNRLECWGPLKDAVLG-----RHHHMQGRKDVSSPNKLR-----SPRSIFQALFA 253
            S  KYNRLECWGPL++A        RH   Q    ++   + R     SP +IF AL A
Sbjct: 199 SSNAKYNRLECWGPLREAANAETTHKRHALEQLHNAITKGTRRRRRKWSSPDAIFSALLA 258

[Close]

BLAST of Spg008858 vs. ExPASy Swiss-Prot
Match: A9YF60 (Protein STAY-GREEN homolog, chloroplastic OS=Capsicum annuum OX=4072 GN=SGR PE=1 SV=2)

HSP 1 Score: 187.2 bits (474), Expect = 2.3e-46
Identity = 92/158 (58.23%), Postives = 115/158 (72.78%), Query Frame = 0


Query: 64  LVPPARFEASKLKVVFTR-EVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWY 123
           L  PA FEASKLKV+F   +  K  G +PRTY L+H D T+ LTL IS  IN  QL+GWY
Sbjct: 43  LFGPAIFEASKLKVLFLGVDEKKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWY 102

Query: 124 N---KDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGD 183
           N   +D+VVAEWKKVK +M LHVHC++SG + +LDL A  RY+IF KELP+VL++ ++GD
Sbjct: 103 NRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFMLDLFARLRYYIFCKELPVVLKAFVHGD 162

Query: 184 SILFGENPELLDALVRVYFHSGSQKYNRLECWGPLKDA 218
             L    PEL  ALV VYFHS  Q++N++ECWGPLKDA
Sbjct: 163 ENLLKNYPELQQALVWVYFHSNIQEFNKVECWGPLKDA 200

[Close]

BLAST of Spg008858 vs. ExPASy Swiss-Prot
Match: A2Z3E5 (Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=SGR PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.3e-46
Identity = 92/160 (57.50%), Postives = 116/160 (72.50%), Query Frame = 0


Query: 64  LVPPARFEASKLKVVF---TREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 123
           L  PA FEASKLKV+F     E ++  G +PRTY L+H D TA LTL +S  IN  QL+G
Sbjct: 51  LFGPAIFEASKLKVLFLGVDEEKHQHPGKLPRTYTLTHSDVTARLTLAVSHTINRAQLQG 110

Query: 124 WYNK---DDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLY 183
           WYNK   D+VVAEWKKV+  M LHVHC++SG + LLDL A  RY+IF KELP+VL++ ++
Sbjct: 111 WYNKLQRDEVVAEWKKVQGHMSLHVHCHISGGHVLLDLIAGLRYYIFRKELPVVLKAFVH 170

Query: 184 GDSILFGENPELLDALVRVYFHSGSQKYNRLECWGPLKDA 218
           GD  LF  +PEL +A V VYFHS   ++NR+ECWGPL+DA
Sbjct: 171 GDGNLFSRHPELEEATVWVYFHSNLPRFNRVECWGPLRDA 210

[Close]

BLAST of Spg008858 vs. ExPASy Swiss-Prot
Match: Q652K1 (Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SGR PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.3e-46
Identity = 92/160 (57.50%), Postives = 116/160 (72.50%), Query Frame = 0


Query: 64  LVPPARFEASKLKVVF---TREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 123
           L  PA FEASKLKV+F     E ++  G +PRTY L+H D TA LTL +S  IN  QL+G
Sbjct: 51  LFGPAIFEASKLKVLFLGVDEEKHQHPGKLPRTYTLTHSDVTARLTLAVSHTINRAQLQG 110

Query: 124 WYNK---DDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLY 183
           WYNK   D+VVAEWKKV+  M LHVHC++SG + LLDL A  RY+IF KELP+VL++ ++
Sbjct: 111 WYNKLQRDEVVAEWKKVQGHMSLHVHCHISGGHVLLDLIAGLRYYIFRKELPVVLKAFVH 170

Query: 184 GDSILFGENPELLDALVRVYFHSGSQKYNRLECWGPLKDA 218
           GD  LF  +PEL +A V VYFHS   ++NR+ECWGPL+DA
Sbjct: 171 GDGNLFSRHPELEEATVWVYFHSNLPRFNRVECWGPLRDA 210

[Close]

BLAST of Spg008858 vs. ExPASy TrEMBL
Match: A0A6J1CHX2 (protein STAY-GREEN LIKE, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011794 PE=3 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 7.7e-122
Identity = 223/256 (87.11%), Postives = 229/256 (89.45%), Query Frame = 0


Query: 1   MAFHCARYSFSPSPGKTKFKFVQRNKPAVLFSSLPTTRASYNRLVSEAEKDKDSVVEFWA 60
           MAFHCARYSFSPSPGK KFK V R+ PAVLFSSL TTRASY+ LVSE            A
Sbjct: 1   MAFHCARYSFSPSPGKPKFKLVHRSNPAVLFSSLRTTRASYSTLVSE------------A 60

Query: 61  VRILVPPARFEASKLKVVFTREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 120
           VRILVPPARFEASKLKVV TRE+NKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG
Sbjct: 61  VRILVPPARFEASKLKVVLTRELNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 120

Query: 121 WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDS 180
           WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDL AEFRYHIFSKELPLVLESVLYGDS
Sbjct: 121 WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDS 180

Query: 181 ILFGENPELLDALVRVYFHSGSQKYNRLECWGPLKDAVLGRHHHMQ----GRKDVSSPNK 240
           +LFGENPELLDALVRVYFHS SQKYNRLECWGPLKDAVLGRHHHMQ    G KD+SSP K
Sbjct: 181 VLFGENPELLDALVRVYFHSSSQKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDMSSPKK 240

Query: 241 LRSPRSIFQALFAFLL 253
           LRSP+SIFQALFAFLL
Sbjct: 241 LRSPKSIFQALFAFLL 244

[Close]

BLAST of Spg008858 vs. ExPASy TrEMBL
Match: A0A6J1H833 (protein STAY-GREEN LIKE, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111461394 PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.6e-119
Identity = 221/256 (86.33%), Postives = 225/256 (87.89%), Query Frame = 0


Query: 1   MAFHCARYSFSPSPGKTKFKFVQRNKPAVLFSSLPTTRASYNRLVSEAEKDKDSVVEFWA 60
           MAFHCARYSFSPSP K KFK V  NKPAVLFSSL +TRASYN LVSE            A
Sbjct: 1   MAFHCARYSFSPSPSKPKFKLVLGNKPAVLFSSLRSTRASYNTLVSE------------A 60

Query: 61  VRILVPPARFEASKLKVVFTREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 120
           VRILVPPARFEASKLKV FTREVNK AGI PRTYILSHCDFTANLTLTISDVINLDQLRG
Sbjct: 61  VRILVPPARFEASKLKVEFTREVNKCAGITPRTYILSHCDFTANLTLTISDVINLDQLRG 120

Query: 121 WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDS 180
           WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDS
Sbjct: 121 WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDS 180

Query: 181 ILFGENPELLDALVRVYFHSGSQKYNRLECWGPLKDAVLGRHHHMQG----RKDVSSPNK 240
           ILF ENPELLDALVRVYFHS SQKYNRLECWGPLKDAV GRHHHMQG     +DVSSP K
Sbjct: 181 ILFRENPELLDALVRVYFHSSSQKYNRLECWGPLKDAVQGRHHHMQGLLRASQDVSSPKK 240

Query: 241 LRSPRSIFQALFAFLL 253
           LR+P+SIFQALFAFLL
Sbjct: 241 LRTPKSIFQALFAFLL 244

[Close]

BLAST of Spg008858 vs. ExPASy TrEMBL
Match: A0A6J1JL65 (protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486879 PE=3 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 1.0e-118
Identity = 220/256 (85.94%), Postives = 224/256 (87.50%), Query Frame = 0


Query: 1   MAFHCARYSFSPSPGKTKFKFVQRNKPAVLFSSLPTTRASYNRLVSEAEKDKDSVVEFWA 60
           MAFHCARYSFSPSP K KFK V  NKP VLFSSL +TRASYN LVSE            A
Sbjct: 1   MAFHCARYSFSPSPSKPKFKLVLGNKPVVLFSSLRSTRASYNTLVSE------------A 60

Query: 61  VRILVPPARFEASKLKVVFTREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 120
           VRILVPPARFEASKLKV FTREVNK AGI PRTYILSHCDFTANLTLTISDVINLDQLRG
Sbjct: 61  VRILVPPARFEASKLKVEFTREVNKCAGITPRTYILSHCDFTANLTLTISDVINLDQLRG 120

Query: 121 WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDS 180
           WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDS
Sbjct: 121 WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDS 180

Query: 181 ILFGENPELLDALVRVYFHSGSQKYNRLECWGPLKDAVLGRHHHMQG----RKDVSSPNK 240
           ILF ENPELLDALVRVYFHS SQKYNRLECWGPLKDAV GRHHHMQG     +DVSSP K
Sbjct: 181 ILFRENPELLDALVRVYFHSSSQKYNRLECWGPLKDAVQGRHHHMQGLLRASQDVSSPKK 240

Query: 241 LRSPRSIFQALFAFLL 253
           LR+P+SIFQALFAFLL
Sbjct: 241 LRTPKSIFQALFAFLL 244

[Close]

BLAST of Spg008858 vs. ExPASy TrEMBL
Match: A0A0A0KGP2 (Staygreen domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G349840 PE=3 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.7e-116
Identity = 215/256 (83.98%), Postives = 221/256 (86.33%), Query Frame = 0


Query: 1   MAFHCARYSFSPSPGKTKFKFVQRNKPAVLFSSLPTTRASYNRLVSEAEKDKDSVVEFWA 60
           MA HC RYSFSPSP K  FK VQRN PA+LFSS  TT ASYN LVSE            A
Sbjct: 1   MALHCVRYSFSPSPAKPNFKLVQRNNPALLFSSFSTTPASYNTLVSE------------A 60

Query: 61  VRILVPPARFEASKLKVVFTREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 120
           VRILVPPARFEASKLKVVF+REV KSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG
Sbjct: 61  VRILVPPARFEASKLKVVFSREVTKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 120

Query: 121 WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDS 180
           WYNKDDVVAEWKKVKDEMCLHVHCYVSGP+SLLD+ AEFRYHIFSKELPLVLESVLYGDS
Sbjct: 121 WYNKDDVVAEWKKVKDEMCLHVHCYVSGPSSLLDVAAEFRYHIFSKELPLVLESVLYGDS 180

Query: 181 ILFGENPELLDALVRVYFHSGSQKYNRLECWGPLKDAVLGRHHHMQ----GRKDVSSPNK 240
           ILFGENPELLD+LVRVYFHS S KYNRLECWGPLKDAVLGRHHHMQ    G KDVS   K
Sbjct: 181 ILFGENPELLDSLVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLSGSKDVSPSKK 240

Query: 241 LRSPRSIFQALFAFLL 253
           LRSP+SIFQALFAFLL
Sbjct: 241 LRSPKSIFQALFAFLL 244

[Close]

BLAST of Spg008858 vs. ExPASy TrEMBL
Match: A0A6J1JU75 (protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111489764 PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 2.9e-113
Identity = 210/256 (82.03%), Postives = 217/256 (84.77%), Query Frame = 0


Query: 1   MAFHCARYSFSPSPGKTKFKFVQRNKPAVLFSSLPTTRASYNRLVSEAEKDKDSVVEFWA 60
           MAF CA YS  PSP K KF+FV R KP VLF S  TT+ASYN LVSE            A
Sbjct: 62  MAFQCASYSVLPSPTKPKFEFVVRKKPVVLFFSFRTTQASYNTLVSE------------A 121

Query: 61  VRILVPPARFEASKLKVVFTREVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 120
           VRILVPPARFEASKLKV F+REV K AGIIPRTYILSHCDFTANLTLTISDVINLDQLRG
Sbjct: 122 VRILVPPARFEASKLKVEFSREVKKCAGIIPRTYILSHCDFTANLTLTISDVINLDQLRG 181

Query: 121 WYNKDDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDS 180
           WYNKDDVVAEWKKVKDEMCLH+HCYVSGPNSLLDL AEFRYHIFSKELPLVLESVLYGDS
Sbjct: 182 WYNKDDVVAEWKKVKDEMCLHIHCYVSGPNSLLDLAAEFRYHIFSKELPLVLESVLYGDS 241

Query: 181 ILFGENPELLDALVRVYFHSGSQKYNRLECWGPLKDAVLGRHHHMQ----GRKDVSSPNK 240
           ILFGENPELLDALVRVYFHS S KYNRLECWGPLKDAVLGRHHHMQ    G KDV SP K
Sbjct: 242 ILFGENPELLDALVRVYFHSSSPKYNRLECWGPLKDAVLGRHHHMQGLLRGSKDVPSPKK 301

Query: 241 LRSPRSIFQALFAFLL 253
           L SP+SIFQALFAF++
Sbjct: 302 LSSPKSIFQALFAFII 305

[Close]

BLAST of Spg008858 vs. TAIR 10
Match: AT1G44000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11911.1); Has 216 Blast hits to 212 proteins in 76 species: Archae - 0; Bacteria - 96; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 263.8 bits (673), Expect = 1.4e-70
Identity = 139/226 (61.50%), Postives = 164/226 (72.57%), Query Frame = 0


Query: 32  SSLPTTRASYNRLVSEAEKDKDSVVEFWAVRILVPPARFEASKLKVVFTREV--NKSAG- 91
           S++     SYN LVSE            AVR+LVP A F++SKLKV F  E+  NKS G 
Sbjct: 47  SAISDGGVSYNTLVSE------------AVRLLVPQANFDSSKLKVEFLGELLENKSNGG 106

Query: 92  -IIPRTYILSHCDFTANLTLTISDVINLDQLRGWYNKDDVVAEWKKVKDEMCLHVHCYVS 151
            I PRTYILSHCDFTANLTLTIS+VINLDQL GWY KDDVVAEWKKV DE+ LH+HC VS
Sbjct: 107 IITPRTYILSHCDFTANLTLTISNVINLDQLEGWYKKDDVVAEWKKVNDELRLHIHCCVS 166

Query: 152 GPNSLLDLTAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDALVRVYFHSGSQKYNR 211
           G + L D+ AE RYHIFSKELPLVL++V++GDS++F ENPEL+DA V VYFHS + KYNR
Sbjct: 167 GMSLLQDVAAELRYHIFSKELPLVLKAVVHGDSVMFRENPELMDAYVWVYFHSSTPKYNR 226

Query: 212 LECWGPLKDAVLGRHH-HMQGRKDVSSPNKLRSPRSIFQALFAFLL 253
           +ECWGPLKDA  G+   + QG    ++  KL   +SIF  LF FLL
Sbjct: 227 IECWGPLKDAAKGKQQGNHQGFLSSTTSRKLIRHKSIFHTLFTFLL 260

[Close]

BLAST of Spg008858 vs. TAIR 10
Match: AT4G22920.1 (non-yellowing 1 )

HSP 1 Score: 182.2 bits (461), Expect = 5.2e-46
Identity = 98/197 (49.75%), Postives = 127/197 (64.47%), Query Frame = 0


Query: 26  KPAVLFSSLPTTRASYNRLVSEAEKDKDSVVEFWAVRILVPPARFEASKLKVVFTR-EVN 85
           KPA  +S   +  +S + L     + K        V  L  PA FE+SKLKV+F   +  
Sbjct: 15  KPA--YSDKRSNSSSSSSLFFNNRRSKKKNQSIVPVARLFGPAIFESSKLKVLFLGVDEK 74

Query: 86  KSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWYN---KDDVVAEWKKVKDEMCLH 145
           K    +PRTY L+H D TA LTL IS  IN  QL+GW N   +D+VVAEWKKVK +M LH
Sbjct: 75  KHPSTLPRTYTLTHSDITAKLTLAISQSINNSQLQGWANRLYRDEVVAEWKKVKGKMSLH 134

Query: 146 VHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDALVRVYFHSG 205
           VHC++SG + LLDL A+FRY IF KELP+VL++ ++GD  L    PEL +ALV VYFHS 
Sbjct: 135 VHCHISGGHFLLDLFAKFRYFIFCKELPVVLKAFVHGDGNLLNNYPELQEALVWVYFHSN 194

Query: 206 SQKYNRLECWGPLKDAV 219
             ++N++ECWGPL +AV
Sbjct: 195 VNEFNKVECWGPLWEAV 209

[Close]

BLAST of Spg008858 vs. TAIR 10
Match: AT4G11910.1 (INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: non-yellowing 1 (TAIR:AT4G22920.1); Has 206 Blast hits to 202 proteins in 67 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 176.4 bits (446), Expect = 2.9e-44
Identity = 89/165 (53.94%), Postives = 114/165 (69.09%), Query Frame = 0


Query: 64  LVPPARFEASKLKVVFTR-EVNKSAGIIPRTYILSHCDFTANLTLTISDVINLDQLRGWY 123
           L  PA FEASKLKV+F   +  K    +PRTY L+H D TA LTL IS  IN  QL+GW 
Sbjct: 47  LFGPAIFEASKLKVLFLGVDEKKHPAKLPRTYTLTHSDITAKLTLAISQSINNSQLQGWA 106

Query: 124 NK---DDVVAEWKKVKDEMCLHVHCYVSGPNSLLDLTAEFRYHIFSKELPLVLESVLYGD 183
           NK   D+VV EWKKVK +M LHVHC++SG +  L+L A+ RY+IF KELP+VLE+  +GD
Sbjct: 107 NKLFRDEVVGEWKKVKGKMSLHVHCHISGGHFFLNLIAKLRYYIFCKELPVVLEAFAHGD 166

Query: 184 SILFGENPELLDALVRVYFHSGSQKYNRLECWGPLKDAVLGRHHH 225
             L   +PEL ++ V VYFHS   +YN++ECWGPL +A + +H H
Sbjct: 167 EYLLNNHPELQESPVWVYFHSNIPEYNKVECWGPLWEA-MSQHQH 210

[Close]

BLAST of Spg008858 vs. TAIR 10
Match: AT4G11911.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 166.4 bits (420), Expect = 3.0e-41
Identity = 92/190 (48.42%), Postives = 120/190 (63.16%), Query Frame = 0


Query: 32  SSLPTTRASYNRLVSEAEKDKDSVVEFWAVRILVPPARFEASKLKVVFTR-EVNKSAGII 91
           SS+P+T  S       +++ K S+   + V  L   A FEASKL V F   +  K    +
Sbjct: 25  SSIPSTTRS-------SKRKKQSM---FPVARLFGQAIFEASKLNVKFLGVDEKKHPPNL 84

Query: 92  PRTYILSHCDFTANLTLTISDVINLDQLRGWYN---KDDVVAEWKKVKDEMCLHVHCYVS 151
           PRTY  +H D TA LTL IS  IN  QL+GW N   +D+VVAEW+KVK  M LHVHC++S
Sbjct: 85  PRTYTFTHSDITAKLTLAISHSINNSQLQGWANRLYRDEVVAEWRKVKSNMSLHVHCHIS 144

Query: 152 GPNSLLDLTAEFRYHIFSKELPLVLESVLYGDSILFGENPELLDALVRVYFHSGSQKYNR 211
           G + LLDL AE RY IF KELP+VL++ ++GD  +    PEL +A V VYFHS   K+N+
Sbjct: 145 GDHFLLDLIAELRYFIFCKELPMVLKAFVHGDENMLNNYPELHEAFVWVYFHSNIPKFNK 204

Query: 212 LECWGPLKDA 218
           +ECWG L +A
Sbjct: 205 VECWGRLCEA 204

The following BLAST results are available for this feature:

BLAST of Spg008858 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141380.1	1.6e-121	87.11	protein STAY-GREEN LIKE, chloroplastic [Momordica charantia]	[more]
XP_038884235.1	1.6e-121	86.72	magnesium dechelatase SGRL, chloroplastic [Benincasa hispida]	[more]
XP_022960677.1	7.4e-119	86.33	protein STAY-GREEN LIKE, chloroplastic [Cucurbita moschata] >XP_023546959.1 prot...	[more]
XP_022989801.1	2.2e-118	85.94	protein STAY-GREEN LIKE, chloroplastic-like [Cucurbita maxima]	[more]
XP_004144252.1	3.4e-116	83.98	magnesium dechelatase SGRL, chloroplastic [Cucumis sativus] >KGN47507.1 hypothet...	[more]

BLAST of Spg008858 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AQ9	1.9e-69	61.50	Magnesium dechelatase SGRL, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SGR...	[more]
Q0J8Q3	1.0e-46	45.27	Protein STAY-GREEN LIKE, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
A9YF60	2.3e-46	58.23	Protein STAY-GREEN homolog, chloroplastic OS=Capsicum annuum OX=4072 GN=SGR PE=1...	[more]
A2Z3E5	2.3e-46	57.50	Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=SGR ...	[more]
Q652K1	2.3e-46	57.50	Protein STAY-GREEN, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SG...	[more]

BLAST of Spg008858 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CHX2	7.7e-122	87.11	protein STAY-GREEN LIKE, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1H833	3.6e-119	86.33	protein STAY-GREEN LIKE, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1JL65	1.0e-118	85.94	protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A0A0KGP2	1.7e-116	83.98	Staygreen domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G349840 P...	[more]
A0A6J1JU75	2.9e-113	82.03	protein STAY-GREEN LIKE, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Spg008858 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G44000.1	1.4e-70	61.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G22920.1	5.2e-46	49.75	non-yellowing 1	[more]
AT4G11910.1	2.9e-44	53.94	INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidops...	[more]
AT4G11911.1	3.0e-41	48.42	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024438	Staygreen protein	PFAM	PF12638	Staygreen	coord: 69..217 e-value: 3.7E-59 score: 198.8
None	No IPR available	PANTHER	PTHR31750	PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED	coord: 17..252
None	No IPR available	PANTHER	PTHR31750:SF18	PROTEIN STAY-GREEN LIKE, CHLOROPLASTIC	coord: 17..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008858.1	Spg008858.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
cellular_component	GO:0016021	integral component of membrane