Spg008740 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008740
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	F-box protein SKIP28
Location	scaffold10: 37571851 .. 37573443 (+)
RNA-Seq Expression	Spg008740
Synteny	Spg008740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAACACTGGACCAGAATCATCCTCGCCCTTCAATTTTCCTCCTCCATTCGAAGCTAAGGAATTAGATATTTTCGTCAAAGCGGCAGCAGAGAAGGAAGACGAAGAACTCATCGACATGTCTGAGAATCAGGAACCCCCAAATCCGGCGGTCGCCGCCGGCAGTTCGTCTCCCGACCTTCGAATCGAAGCAGGGCCACCGCACGAGGCGTTATTTTTTGTACTGAGTTATCTTCCTCTCTCTGAGCTTCTTTCCATGAGCGCAGTCTGCGTATCGCTCAGAGACGCAGTGGAACGCGATGTGTTGCCGTGGCTTCACATCGTCGTCGATCTGCCCTTGAGCTACCGGCTGTCCGATGAAATTCTTCGGAGAATCGCCCGGAAGGCCGATGGTCGCCTCAGAACCTTGGCTTTGATCAACTGTTTCAAGATTTCAGATTCTGGACTTCACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGGTATTCACGTATATTCGTATAAGTGCTATGCTCGTGTTGTTTGGTTAATCTTCTCAATAATTTCTCTATTTTTTAGTCATAATATTTACCCTGACTTTCTGAATTATCTGTATAGAATGTCAATTTGGGTTTGGATTTTTCAAAAAGATTAAGTTCACTGTTCACGTGAAATCACTGTTTAAAGAGGAGGTAGCAACTTTTTCAATGTCATTGGTTGCACTGTTGTCACGTCCTTGCTAATTTGGAAGGATTTTAACCAACATGTTGTAAAGAAACATAGGACAAAATTGATTTTGATCCTTTCACAATTGCTCCCAAATATGCCTTAAATCAGAAGAAGAGAGTAGAAAAATTGTAAAGAAACATATGCCAAAAGTGATTTTGATCCTTTCACAATTACTCCCAGATATACCTTAAATCAGAAGAAGAGAGTAGAAAAATGGTATCTCAATAGTTGCTTTAGAAATCATTATCCAGATTTTCTGTATCTATACTCCTCAGCTTTACGTACCTGGATGCTCGAGTTTGACCCCTGGGGGAGTGGTTAGAGCAGTGAAGACTCTATCTCAACATTCTCACAACCTGAAGAGCCTAATGATTCATGGCATTTACAAAATAGATAATAATGAACACCTTGAAGTCCTCAAATGCCATCTTCTCATCAACCGATCACAACAGCTACCGCAGAAGCAGCAGCAAAAACAACCTCTCCTGTACCATGAGTACATTGACCGATCGAAGTTATTGAGTGACGAATACCAGCCAATGATTGATGTACAAATCTGCCCAAAATGCAATGATATAGGGAGAGTTTATGATTGCTCAAGGGAGAGGTGCAAGATAAAGCAAGAGGAGAAATTGCAGGCAGACTGCCGGGGTTGCAGCCTTTGCGTTACAAGGTGTGAAGAATGTGGGGGATGCGTGGATGATGATGAAAAAGAAGAGGCTGTATGTGCACGTACCTTGTGTTCAAGTTGCTGGCTTCAACTTCCCAAATGCAACGAATGTAATAGGCCATATTGCAAGCGACATCGTGATAATGTAACTGTAAGTAGCTCTGCAGCTGGTTTTGTTTGTGAAGTTTGTCTAGAAGGGTGTATTTGGTGTTGA

mRNA sequence

GTGAACACTGGACCAGAATCATCCTCGCCCTTCAATTTTCCTCCTCCATTCGAAGCTAAGGAATTAGATATTTTCGTCAAAGCGGCAGCAGAGAAGGAAGACGAAGAACTCATCGACATGTCTGAGAATCAGGAACCCCCAAATCCGGCGGTCGCCGCCGGCAGTTCGTCTCCCGACCTTCGAATCGAAGCAGGGCCACCGCACGAGGCGTTATTTTTTGTACTGAGTTATCTTCCTCTCTCTGAGCTTCTTTCCATGAGCGCAGTCTGCGTATCGCTCAGAGACGCAGTGGAACGCGATGTGTTGCCGTGGCTTCACATCGTCGTCGATCTGCCCTTGAGCTACCGGCTGTCCGATGAAATTCTTCGGAGAATCGCCCGGAAGGCCGATGGTCGCCTCAGAACCTTGGCTTTGATCAACTGTTTCAAGATTTCAGATTCTGGACTTCACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGATTTTCTGTATCTATACTCCTCAGCTTTACGTACCTGGATGCTCGAGTTTGACCCCTGGGGGAGTGGTTAGAGCAGTGAAGACTCTATCTCAACATTCTCACAACCTGAAGAGCCTAATGATTCATGGCATTTACAAAATAGATAATAATGAACACCTTGAAGTCCTCAAATGCCATCTTCTCATCAACCGATCACAACAGCTACCGCAGAAGCAGCAGCAAAAACAACCTCTCCTGTACCATGAGTACATTGACCGATCGAAGTTATTGAGTGACGAATACCAGCCAATGATTGATGTACAAATCTGCCCAAAATGCAATGATATAGGGAGAGTTTATGATTGCTCAAGGGAGAGGTGCAAGATAAAGCAAGAGGAGAAATTGCAGGCAGACTGCCGGGGTTGCAGCCTTTGCGTTACAAGGTGTGAAGAATGTGGGGGATGCGTGGATGATGATGAAAAAGAAGAGGCTGTATGTGCACGTACCTTGTGTTCAAGTTGCTGGCTTCAACTTCCCAAATGCAACGAATGTAATAGGCCATATTGCAAGCGACATCGTGATAATGTAACTGTAAGTAGCTCTGCAGCTGGTTTTGTTTGTGAAGTTTGTCTAGAAGGGTGTATTTGGTGTTGA

Coding sequence (CDS)

GTGAACACTGGACCAGAATCATCCTCGCCCTTCAATTTTCCTCCTCCATTCGAAGCTAAGGAATTAGATATTTTCGTCAAAGCGGCAGCAGAGAAGGAAGACGAAGAACTCATCGACATGTCTGAGAATCAGGAACCCCCAAATCCGGCGGTCGCCGCCGGCAGTTCGTCTCCCGACCTTCGAATCGAAGCAGGGCCACCGCACGAGGCGTTATTTTTTGTACTGAGTTATCTTCCTCTCTCTGAGCTTCTTTCCATGAGCGCAGTCTGCGTATCGCTCAGAGACGCAGTGGAACGCGATGTGTTGCCGTGGCTTCACATCGTCGTCGATCTGCCCTTGAGCTACCGGCTGTCCGATGAAATTCTTCGGAGAATCGCCCGGAAGGCCGATGGTCGCCTCAGAACCTTGGCTTTGATCAACTGTTTCAAGATTTCAGATTCTGGACTTCACGAAGTTGTTGAGAAGAATCCTCTTCTCACCAAGATTTTCTGTATCTATACTCCTCAGCTTTACGTACCTGGATGCTCGAGTTTGACCCCTGGGGGAGTGGTTAGAGCAGTGAAGACTCTATCTCAACATTCTCACAACCTGAAGAGCCTAATGATTCATGGCATTTACAAAATAGATAATAATGAACACCTTGAAGTCCTCAAATGCCATCTTCTCATCAACCGATCACAACAGCTACCGCAGAAGCAGCAGCAAAAACAACCTCTCCTGTACCATGAGTACATTGACCGATCGAAGTTATTGAGTGACGAATACCAGCCAATGATTGATGTACAAATCTGCCCAAAATGCAATGATATAGGGAGAGTTTATGATTGCTCAAGGGAGAGGTGCAAGATAAAGCAAGAGGAGAAATTGCAGGCAGACTGCCGGGGTTGCAGCCTTTGCGTTACAAGGTGTGAAGAATGTGGGGGATGCGTGGATGATGATGAAAAAGAAGAGGCTGTATGTGCACGTACCTTGTGTTCAAGTTGCTGGCTTCAACTTCCCAAATGCAACGAATGTAATAGGCCATATTGCAAGCGACATCGTGATAATGTAACTGTAAGTAGCTCTGCAGCTGGTTTTGTTTGTGAAGTTTGTCTAGAAGGGTGTATTTGGTGTTGA

Protein sequence

VNTGPESSSPFNFPPPFEAKELDIFVKAAAEKEDEELIDMSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHRDNVTVSSSAAGFVCEVCLEGCIWC

Homology

[Close]

BLAST of Spg008740 vs. NCBI nr
Match: XP_038906463.1 (F-box protein SKIP28 [Benincasa hispida])

HSP 1 Score: 528.5 bits (1360), Expect = 4.7e-146
Identity = 277/364 (76.10%), Postives = 300/364 (82.42%), Query Frame = 0


Query: 3   TGPESSSPFNFPPPFEAKELDIFVKAAAEKEDEELIDMSENQEPPNPAVAAGSSSPDLRI 62
           TGPESS         EAKEL I + +AAEKEDE++  MSENQEP NPA AAGSS P +RI
Sbjct: 2   TGPESS---------EAKELGISLTSAAEKEDEDITAMSENQEPQNPAAAAGSSFPGVRI 61

Query: 63  EAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEIL 122
           EAGPPHEALF VLSYLPL ELLSMS+VCVSLRDAVE DVLPWLHIVVD  LS RLSD  L
Sbjct: 62  EAGPPHEALFLVLSYLPLFELLSMSSVCVSLRDAVEHDVLPWLHIVVDRRLSSRLSDYRL 121

Query: 123 RRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGG 182
            RIARKA GRLRTLALINCFKISDSG HEVVEKNPLLTK        LYVPGC+SLTPGG
Sbjct: 122 GRIARKAGGRLRTLALINCFKISDSGFHEVVEKNPLLTK--------LYVPGCTSLTPGG 181

Query: 183 VVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYH 242
           VVRAVKTLSQHSHNLKSLMI GIY I+ NEHLEVLKCHLL NRS  L Q+++++Q  LY 
Sbjct: 182 VVRAVKTLSQHSHNLKSLMIGGIYNIE-NEHLEVLKCHLLENRS--LQQQEERQQHHLYR 241

Query: 243 EYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTR 302
           E+IDRSKLLS+E+QP+IDVQICPKC++I  VYDCSRERCKIKQE++L ADCRGC  C+ R
Sbjct: 242 EHIDRSKLLSNEFQPVIDVQICPKCSEIRSVYDCSRERCKIKQEKQLLADCRGCISCIPR 301

Query: 303 CEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHRDNVTVSSSAAGFVCE 362
           CEECGGCVDDDE EEAVCA  LCSSCWLQLPKCN CNRPYC RH  N  VSSS  GFVCE
Sbjct: 302 CEECGGCVDDDEIEEAVCAGILCSSCWLQLPKCNHCNRPYCTRHCQN--VSSSTTGFVCE 343

Query: 363 VCLE 367
           +CLE
Sbjct: 362 ICLE 343

[Close]

BLAST of Spg008740 vs. NCBI nr
Match: XP_004150124.1 (F-box protein SKIP28 [Cucumis sativus])

HSP 1 Score: 483.4 bits (1243), Expect = 1.7e-132
Identity = 258/363 (71.07%), Postives = 280/363 (77.13%), Query Frame = 0


Query: 4   GPESSSPFNFPPPFEAKELDIFVKAAAEKEDEELIDMSENQEPPNPAVAAGSSSPDLRIE 63
           GPESS          AKEL     +AAEK+DEEL  MSENQEPPNPA  A         E
Sbjct: 3   GPESS---------VAKELGFSRTSAAEKKDEELTSMSENQEPPNPASVA---------E 62

Query: 64  AGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILR 123
           AGPPHEALF V++YLPL ELLS+SAVCVSLRDAVE DVLPWLHIVVD  LS RLSD  L 
Sbjct: 63  AGPPHEALFHVMTYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLG 122

Query: 124 RIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGV 183
           RIARKA GRLRTLALINCFKISDSGLHEVVE NPLLTK        LYVPGC+SLTP GV
Sbjct: 123 RIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTK--------LYVPGCTSLTPEGV 182

Query: 184 VRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHE 243
           VRAVKTLSQ SHNLK+LMI GIY I+ N+HLEVL+ HLL NRS    Q+ +Q    LYHE
Sbjct: 183 VRAVKTLSQDSHNLKNLMIGGIYNIE-NQHLEVLRSHLLENRSLNKQQEWRQVHH-LYHE 242

Query: 244 YIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRC 303
           ++DR +LLS ++ P+IDVQICPKC DI  VYDCSRERCKIKQ E L ADCRGC  C+ RC
Sbjct: 243 HVDRPRLLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRC 302

Query: 304 EECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHRDNVTVSSSAAGFVCEV 363
           EECGGCVDDDE EEA+C+  LCSSCW QLPKCN CNRPYCKRHRDN  VSSS AGFVCE+
Sbjct: 303 EECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDN--VSSSTAGFVCEI 335

Query: 364 CLE 367
           CLE
Sbjct: 363 CLE 335

[Close]

BLAST of Spg008740 vs. NCBI nr
Match: KAG6579265.1 (F-box protein SKIP28, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 482.3 bits (1240), Expect = 3.9e-132
Identity = 246/327 (75.23%), Postives = 272/327 (83.18%), Query Frame = 0


Query: 40  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVER 99
           MSEN++ PN     GSSSP +RI AGPPHEALF VLSYLPL ELLSM AVCVSLRDAVE 
Sbjct: 1   MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH 60

Query: 100 DVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLL 159
           DVLPWLH+VVD PLS RL+D IL RIARKADGRLRTLALINCFKISDS LH+VVE NPLL
Sbjct: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHQVVENNPLL 120

Query: 160 TKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKC 219
           TK        LYVPGC+SLTP GV+RAV+TLSQHSHNL SLMI GIY I+ NEHLEVLK 
Sbjct: 121 TK--------LYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIE-NEHLEVLKY 180

Query: 220 HLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRE 279
           HLL NRS+Q  Q+QQQ++ L +HE+I+ SKLL +EY  MIDV++CPKC +IGRVYDCSRE
Sbjct: 181 HLLKNRSEQQQQQQQQRR-LYHHEHIEASKLLRNEYVAMIDVEMCPKCEEIGRVYDCSRE 240

Query: 280 RCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECN 339
           RCKIKQE+K  A+CRGCS CV RCEECGGCVD DE EEAVCA  LC+SCWLQLPKCN CN
Sbjct: 241 RCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCN 300

Query: 340 RPYCKRHRDNVTVSSSAAGFVCEVCLE 367
           RPYC RH  NV VSS+AAGFVCEVC+E
Sbjct: 301 RPYCTRHCQNV-VSSTAAGFVCEVCIE 316

[Close]

BLAST of Spg008740 vs. NCBI nr
Match: XP_023551551.1 (F-box protein SKIP28-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 482.3 bits (1240), Expect = 3.9e-132
Identity = 246/327 (75.23%), Postives = 269/327 (82.26%), Query Frame = 0


Query: 40  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVER 99
           MSEN++ PN     GSSSP +RI AGPPHEALF VLSYLPL E+LSM AVCVSLRDAVE 
Sbjct: 1   MSENKKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFEILSMGAVCVSLRDAVEH 60

Query: 100 DVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLL 159
           DVLPWLH+ VD PLS RL+D IL RIARKADGRLRTLALINCFKISDS LHEVVE NPLL
Sbjct: 61  DVLPWLHLAVDRPLSSRLNDYILERIARKADGRLRTLALINCFKISDSALHEVVENNPLL 120

Query: 160 TKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKC 219
           TK        LYVPGC+SLTP GV+RAV+TLSQHSHNL SLMI GIY I+ NEHLEVLK 
Sbjct: 121 TK--------LYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIE-NEHLEVLKY 180

Query: 220 HLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRE 279
           HLL N SQQ  Q+QQQ+Q  LYH+YI+  KLL +EY  MIDV++CPKC +IG+VYDCSRE
Sbjct: 181 HLLKNGSQQ--QQQQQQQRRLYHKYIEAWKLLRNEYMAMIDVEMCPKCQEIGKVYDCSRE 240

Query: 280 RCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECN 339
           RCKIKQE+   A+CRGCS CV RCEECGGCVD DE EEAVCA  LC+SCWLQLPKCN CN
Sbjct: 241 RCKIKQEQNSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCN 300

Query: 340 RPYCKRHRDNVTVSSSAAGFVCEVCLE 367
           RPYC RHR NV VSSSAAGFVCEVC+E
Sbjct: 301 RPYCTRHRQNV-VSSSAAGFVCEVCIE 315

[Close]

BLAST of Spg008740 vs. NCBI nr
Match: XP_022939676.1 (F-box protein SKIP28 [Cucurbita moschata])

HSP 1 Score: 478.4 bits (1230), Expect = 5.6e-131
Identity = 246/327 (75.23%), Postives = 269/327 (82.26%), Query Frame = 0


Query: 40  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVER 99
           MSEN + PN     GSSSP +RI AGPPHEALF VLSYLPL ELLSM AVCVSLRDAV  
Sbjct: 1   MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAH 60

Query: 100 DVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLL 159
           DVLPWLH+VVD PLS RL+D IL RIARKADGRLRTLALINCFKISDS LHEVVE NPLL
Sbjct: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVENNPLL 120

Query: 160 TKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKC 219
           TK        LYVPGC+SLTP GV+RAV+TLSQHSHNL SLMI GIY I+ NEHLEVLK 
Sbjct: 121 TK--------LYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIE-NEHLEVLKY 180

Query: 220 HLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRE 279
           HLL NRSQQ  Q+QQQ++ L +HE+I+ SKLL ++Y  MIDV++CPKC +IGRVYDCSRE
Sbjct: 181 HLLKNRSQQ--QQQQQQRRLYHHEHIEASKLLRNKYVAMIDVEMCPKCQEIGRVYDCSRE 240

Query: 280 RCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECN 339
           RCKIKQE+K  A+CRGCS CV RCEECGGCVD DE EEAVCA  LC+SCWLQLPKCN CN
Sbjct: 241 RCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCN 300

Query: 340 RPYCKRHRDNVTVSSSAAGFVCEVCLE 367
           RPYC RH  NV  SSSAAGFVCEVC+E
Sbjct: 301 RPYCTRHCQNVG-SSSAAGFVCEVCIE 315

[Close]

BLAST of Spg008740 vs. ExPASy Swiss-Prot
Match: Q9ZU90 (F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.2e-51
Identity = 118/307 (38.44%), Postives = 164/307 (53.42%), Query Frame = 0


Query: 68  HEALFFVLSYL-PLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIA 127
           HE L  VL YL  L ELLSM  V  SLRDA+  +   W  +V++ PLS RL+D+IL   +
Sbjct: 17  HEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTDDILSEFS 76

Query: 128 RKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRA 187
            K+ G+L+TL L  C  +++ GL  VV+ NPL+TKI         VPGCS LTP G++  
Sbjct: 77  SKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKII--------VPGCSGLTPEGIMEC 136

Query: 188 VKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYID 247
           V++LS+++H L++L I+G+      +HL  L  +L                         
Sbjct: 137 VESLSKNNHKLETLHINGVNGF-TKQHLSALYTYL------------------------- 196

Query: 248 RSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEEC 307
                    +  ID+++CPKC+++  +  CSRE C  KQ +     CRGC LC+ RC EC
Sbjct: 197 -------SSEGTIDLEVCPKCDEVRMIPSCSRESCNQKQRK-----CRGCWLCIPRCAEC 256

Query: 308 GGCV--DDDEKEEAVCAR--TLCSSCWLQLPKCNECNRPYC-----KRHRDNVTVSSSAA 365
             C+   D E +EA C     LC  CWL LPKC  CN+PYC     +RH   +T ++S  
Sbjct: 257 AVCLVGSDTESQEAACGNDDVLCLECWLVLPKCRFCNKPYCTNHSSRRHEIAITDAASRP 277

[Close]

BLAST of Spg008740 vs. ExPASy Swiss-Prot
Match: Q9LU91 (F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.1e-35
Identity = 90/268 (33.58%), Postives = 141/268 (52.61%), Query Frame = 0


Query: 68  HEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIAR 127
           H A+ F L +L   +LLS+S VC SL   V  D L W HI +  PL+ ++++E L  +  
Sbjct: 201 HPAIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEALLHLTE 260

Query: 128 KADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAV 187
           +A G ++ L +++C +I+D  L  VV +N  + KI         VPGC+ +T  G++  +
Sbjct: 261 RAQGTMQCLRIVDCCRITDDCLKRVVARNRQVVKI--------GVPGCTRITIDGILSVL 320

Query: 188 KTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYID 247
           + L S     +K L + G++ +  + + E++    + N+ +Q  QK     P  YH    
Sbjct: 321 RDLKSAGKLQVKHLQLRGLFGVTKDHYDELIDLLNIDNKVKQTIQK-----PRFYHR--- 380

Query: 248 RSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEEC 307
               +S +    +D+++CPKC +   VYDC  E CK K  +K   +CR CSLC+ RC  C
Sbjct: 381 GEACVSCDDDRALDIEMCPKCQNFKLVYDCPAEDCKGK--KKGSEECRACSLCIQRCYHC 440

Query: 308 GGCVDDDEKEEAVCARTLCSSCWLQLPK 335
           G C+ D E EE  C   LC+ C    PK
Sbjct: 441 GRCIIDTEYEEMFCLELLCAVCSKPTPK 450

[Close]

BLAST of Spg008740 vs. ExPASy Swiss-Prot
Match: Q9LK24 (F-box protein At3g27290 OS=Arabidopsis thaliana OX=3702 GN=At3g27290 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.2e-27
Identity = 88/267 (32.96%), Postives = 139/267 (52.06%), Query Frame = 0


Query: 65  GPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHI-VVDLPLSYRLSDEILR 124
           G  H+A   VL YL L E+L++  VC SLRD+V ++   W  I + D  L YR++DE L 
Sbjct: 125 GEAHDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESLL 184

Query: 125 RIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGV 184
           ++ R+A G +R L L  C  I+D GL +V+  NP LTK        L V GC  L+  G+
Sbjct: 185 KLTRRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTK--------LSVSGCLRLSTAGL 244

Query: 185 VRAVKTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYH 244
           V  ++ L S +   +KSL+  G       +  E+   +LL+    ++  ++++K+   ++
Sbjct: 245 VSTLRDLKSSNRLGVKSLITGGALYFTKEQFKEL---NLLLGGDAKVGLQERKKR---FY 304

Query: 245 EYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIK-QEEKLQADCRGCSLCVT 304
                   L D+   + D++ICP C     V+DC  + C +K Q    ++ CR C +C+ 
Sbjct: 305 TSCRSEFYLEDD--RVTDLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIE 364

Query: 305 RCEECGGCVDDDEKEEAVCARTLCSSC 329
           RC ECG C++D E  +  C    C  C
Sbjct: 365 RCHECGSCLNDCE-NKPFCFAFSCVVC 374

[Close]

BLAST of Spg008740 vs. ExPASy TrEMBL
Match: A0A0A0KSU6 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G566290 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 8.4e-133
Identity = 258/363 (71.07%), Postives = 280/363 (77.13%), Query Frame = 0


Query: 4   GPESSSPFNFPPPFEAKELDIFVKAAAEKEDEELIDMSENQEPPNPAVAAGSSSPDLRIE 63
           GPESS          AKEL     +AAEK+DEEL  MSENQEPPNPA  A         E
Sbjct: 3   GPESS---------VAKELGFSRTSAAEKKDEELTSMSENQEPPNPASVA---------E 62

Query: 64  AGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILR 123
           AGPPHEALF V++YLPL ELLS+SAVCVSLRDAVE DVLPWLHIVVD  LS RLSD  L 
Sbjct: 63  AGPPHEALFHVMTYLPLFELLSLSAVCVSLRDAVEHDVLPWLHIVVDGRLSSRLSDYTLG 122

Query: 124 RIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGV 183
           RIARKA GRLRTLALINCFKISDSGLHEVVE NPLLTK        LYVPGC+SLTP GV
Sbjct: 123 RIARKASGRLRTLALINCFKISDSGLHEVVENNPLLTK--------LYVPGCTSLTPEGV 182

Query: 184 VRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHE 243
           VRAVKTLSQ SHNLK+LMI GIY I+ N+HLEVL+ HLL NRS    Q+ +Q    LYHE
Sbjct: 183 VRAVKTLSQDSHNLKNLMIGGIYNIE-NQHLEVLRSHLLENRSLNKQQEWRQVHH-LYHE 242

Query: 244 YIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRC 303
           ++DR +LLS ++ P+IDVQICPKC DI  VYDCSRERCKIKQ E L ADCRGC  C+ RC
Sbjct: 243 HVDRPRLLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRC 302

Query: 304 EECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECNRPYCKRHRDNVTVSSSAAGFVCEV 363
           EECGGCVDDDE EEA+C+  LCSSCW QLPKCN CNRPYCKRHRDN  VSSS AGFVCE+
Sbjct: 303 EECGGCVDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDN--VSSSTAGFVCEI 335

Query: 364 CLE 367
           CLE
Sbjct: 363 CLE 335

[Close]

BLAST of Spg008740 vs. ExPASy TrEMBL
Match: A0A6J1FGL5 (F-box protein SKIP28 OS=Cucurbita moschata OX=3662 GN=LOC111445493 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 2.7e-131
Identity = 246/327 (75.23%), Postives = 269/327 (82.26%), Query Frame = 0


Query: 40  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVER 99
           MSEN + PN     GSSSP +RI AGPPHEALF VLSYLPL ELLSM AVCVSLRDAV  
Sbjct: 1   MSENNKFPNQVAVCGSSSPGVRIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVAH 60

Query: 100 DVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLL 159
           DVLPWLH+VVD PLS RL+D IL RIARKADGRLRTLALINCFKISDS LHEVVE NPLL
Sbjct: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVENNPLL 120

Query: 160 TKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKC 219
           TK        LYVPGC+SLTP GV+RAV+TLSQHSHNL SLMI GIY I+ NEHLEVLK 
Sbjct: 121 TK--------LYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIE-NEHLEVLKY 180

Query: 220 HLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRE 279
           HLL NRSQQ  Q+QQQ++ L +HE+I+ SKLL ++Y  MIDV++CPKC +IGRVYDCSRE
Sbjct: 181 HLLKNRSQQ--QQQQQQRRLYHHEHIEASKLLRNKYVAMIDVEMCPKCQEIGRVYDCSRE 240

Query: 280 RCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECN 339
           RCKIKQE+K  A+CRGCS CV RCEECGGCVD DE EEAVCA  LC+SCWLQLPKCN CN
Sbjct: 241 RCKIKQEQKSGAECRGCSGCVPRCEECGGCVDGDETEEAVCAGILCTSCWLQLPKCNHCN 300

Query: 340 RPYCKRHRDNVTVSSSAAGFVCEVCLE 367
           RPYC RH  NV  SSSAAGFVCEVC+E
Sbjct: 301 RPYCTRHCQNVG-SSSAAGFVCEVCIE 315

[Close]

BLAST of Spg008740 vs. ExPASy TrEMBL
Match: A0A6J1IEZ1 (F-box protein SKIP28 OS=Cucurbita maxima OX=3661 GN=LOC111472110 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 5.1e-130
Identity = 243/327 (74.31%), Postives = 268/327 (81.96%), Query Frame = 0


Query: 40  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVER 99
           MSEN++ PN     GSSSP + I AGPPHEALF VLSYLPL ELLSM AVCVSLRDAVE 
Sbjct: 1   MSENKKFPNQVAVCGSSSPGVGIAAGPPHEALFLVLSYLPLFELLSMGAVCVSLRDAVEH 60

Query: 100 DVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLL 159
           DVLPWLH+VVD PLS RL+D IL RIARKADGRLRTLALINCFKISDS LHEVV+ NPLL
Sbjct: 61  DVLPWLHLVVDRPLSSRLNDYILGRIARKADGRLRTLALINCFKISDSALHEVVQNNPLL 120

Query: 160 TKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKC 219
           TK        LYVPGC+SLTP GV+RAV+TLSQHSHNL SLMI GIY I+ NEHLEVLK 
Sbjct: 121 TK--------LYVPGCTSLTPEGVIRAVETLSQHSHNLNSLMIGGIYNIE-NEHLEVLKY 180

Query: 220 HLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRE 279
           +LL NRSQQ  Q+QQQ+Q  LYH+ I+ SKLL +E   MIDV++CPKC ++GRVYDCSRE
Sbjct: 181 YLLKNRSQQ-QQQQQQQQRRLYHKDIEASKLLRNECVAMIDVEMCPKCQEMGRVYDCSRE 240

Query: 280 RCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECN 339
           RCKIKQE+K  A+CRGCS CV RCEECGGCVD DE EEAVC   LC+SCWLQLPKCN CN
Sbjct: 241 RCKIKQEQKFGAECRGCSGCVPRCEECGGCVDGDETEEAVCVGVLCTSCWLQLPKCNHCN 300

Query: 340 RPYCKRHRDNVTVSSSAAGFVCEVCLE 367
           +PYC RHR NV  SSSAAGFVCEVC+E
Sbjct: 301 KPYCTRHRQNV-ASSSAAGFVCEVCIE 316

[Close]

BLAST of Spg008740 vs. ExPASy TrEMBL
Match: A0A5A7TYB5 (F-box protein SKIP28 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00470 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 7.6e-126
Identity = 241/327 (73.70%), Postives = 260/327 (79.51%), Query Frame = 0


Query: 40  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVER 99
           MSENQEPPNPA  A         EAGPPHEALF V+SYL L ELLSMSAVCVSLRDAVE 
Sbjct: 1   MSENQEPPNPAAVA---------EAGPPHEALFHVVSYLSLFELLSMSAVCVSLRDAVEH 60

Query: 100 DVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLL 159
           DVLPWLHIVVD  LS RLSD  L RIARKA GRLRTLALI+CFKISDSGLHEVVE NPLL
Sbjct: 61  DVLPWLHIVVDGRLSSRLSDYTLGRIARKAGGRLRTLALIDCFKISDSGLHEVVENNPLL 120

Query: 160 TKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKC 219
           TK        LYVPGC+SLTP GVVRAVKT SQHSHNLK+LMI GIY I+N+ HLEVL+ 
Sbjct: 121 TK--------LYVPGCTSLTPAGVVRAVKTSSQHSHNLKNLMIGGIYNIENH-HLEVLRS 180

Query: 220 HLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRE 279
           HLL NRSQ   Q+ +Q    LYHE++DR  LLS+++ P+IDVQICPKC DI  VYDCSRE
Sbjct: 181 HLLENRSQNKQQEWRQVHH-LYHEHVDRPNLLSNDFLPLIDVQICPKCYDIRNVYDCSRE 240

Query: 280 RCKIKQEEKLQADCRGCSLCVTRCEECGGCVDDDEKEEAVCARTLCSSCWLQLPKCNECN 339
           RCKIKQ E L ADCRGC  C+ RCEECGGCVD DE EEA+C   +CSSCWLQLPKCN CN
Sbjct: 241 RCKIKQGENLLADCRGCISCMPRCEECGGCVDVDEIEEAICPGIVCSSCWLQLPKCNHCN 300

Query: 340 RPYCKRHRDNVTVSSSAAGFVCEVCLE 367
           RPYCKRHRDN  VSSS AGFVCE+CLE
Sbjct: 301 RPYCKRHRDN--VSSSTAGFVCEICLE 306

[Close]

BLAST of Spg008740 vs. ExPASy TrEMBL
Match: A0A6J1CZ11 (F-box protein SKIP28 OS=Momordica charantia OX=3673 GN=LOC111015558 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 1.1e-124
Identity = 242/338 (71.60%), Postives = 266/338 (78.70%), Query Frame = 0


Query: 40  MSENQEPPNPAVAAGSSSPDLRIEAGPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVER 99
           MS NQE PNPA A       + I+AGPPH+A F VLSYLPL ELLSMSAVCVSLRDAVER
Sbjct: 1   MSSNQETPNPAAAG------VPIDAGPPHQAFFLVLSYLPLLELLSMSAVCVSLRDAVER 60

Query: 100 DVLPWLHIVVDLPLSYRLSDEILRRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLL 159
           D+LPW HI+VD  LS RLSD+IL+RI RKADGRLRTLALI CFKISDSGLH+VV +NPLL
Sbjct: 61  DLLPWPHILVDGRLSSRLSDKILKRIVRKADGRLRTLALIKCFKISDSGLHKVVARNPLL 120

Query: 160 TKIFCIYTPQLYVPGCSSLTPGGVVRAVKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKC 219
            K        LYVPGC+ LTP GVVRAVKTLSQHSHNLKS+MI GIY I+ NEHLEVL+ 
Sbjct: 121 CK--------LYVPGCTRLTPEGVVRAVKTLSQHSHNLKSIMIGGIYNIE-NEHLEVLQY 180

Query: 220 HLLINRSQQLPQKQQQKQPLLYHEYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRE 279
           HL INRSQ     QQQ+Q LL HEYIDRSKLLSDEYQPMIDVQICPKCN+I RVYDCSRE
Sbjct: 181 HLHINRSQ-----QQQQQRLLCHEYIDRSKLLSDEYQPMIDVQICPKCNEILRVYDCSRE 240

Query: 280 RCKIKQEEKLQADCRGCSLCVTRCEECGGCVD--DDEKEEAVCARTLCSSCWLQLPKCNE 339
            CKIKQE+KLQADCR C+ C+ RCEECGGCVD  D E EEAVCA +LC+SCWL+LPKCN 
Sbjct: 241 SCKIKQEDKLQADCRACTGCIKRCEECGGCVDEADYEVEEAVCACSLCTSCWLRLPKCNH 300

Query: 340 CNRPYCKRHR---------DNVTVSSSAAGFVCEVCLE 367
           CN+PYC R            +  V +SA GFVCEVCLE
Sbjct: 301 CNKPYCLRRNRCDEPYCMLHSPLVRNSAPGFVCEVCLE 318

[Close]

BLAST of Spg008740 vs. TAIR 10
Match: AT2G01620.1 (RNI-like superfamily protein )

HSP 1 Score: 205.3 bits (521), Expect = 8.5e-53
Identity = 118/307 (38.44%), Postives = 164/307 (53.42%), Query Frame = 0


Query: 68  HEALFFVLSYL-PLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIA 127
           HE L  VL YL  L ELLSM  V  SLRDA+  +   W  +V++ PLS RL+D+IL   +
Sbjct: 17  HEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTDDILSEFS 76

Query: 128 RKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRA 187
            K+ G+L+TL L  C  +++ GL  VV+ NPL+TKI         VPGCS LTP G++  
Sbjct: 77  SKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKII--------VPGCSGLTPEGIMEC 136

Query: 188 VKTLSQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYID 247
           V++LS+++H L++L I+G+      +HL  L  +L                         
Sbjct: 137 VESLSKNNHKLETLHINGVNGF-TKQHLSALYTYL------------------------- 196

Query: 248 RSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEEC 307
                    +  ID+++CPKC+++  +  CSRE C  KQ +     CRGC LC+ RC EC
Sbjct: 197 -------SSEGTIDLEVCPKCDEVRMIPSCSRESCNQKQRK-----CRGCWLCIPRCAEC 256

Query: 308 GGCV--DDDEKEEAVCAR--TLCSSCWLQLPKCNECNRPYC-----KRHRDNVTVSSSAA 365
             C+   D E +EA C     LC  CWL LPKC  CN+PYC     +RH   +T ++S  
Sbjct: 257 AVCLVGSDTESQEAACGNDDVLCLECWLVLPKCRFCNKPYCTNHSSRRHEIAITDAASRP 277

[Close]

BLAST of Spg008740 vs. TAIR 10
Match: AT3G26000.1 (Ribonuclease inhibitor )

HSP 1 Score: 151.4 bits (381), Expect = 1.5e-36
Identity = 90/268 (33.58%), Postives = 141/268 (52.61%), Query Frame = 0


Query: 68  HEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHIVVDLPLSYRLSDEILRRIAR 127
           H A+ F L +L   +LLS+S VC SL   V  D L W HI +  PL+ ++++E L  +  
Sbjct: 201 HPAIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNEKITEEALLHLTE 260

Query: 128 KADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGVVRAV 187
           +A G ++ L +++C +I+D  L  VV +N  + KI         VPGC+ +T  G++  +
Sbjct: 261 RAQGTMQCLRIVDCCRITDDCLKRVVARNRQVVKI--------GVPGCTRITIDGILSVL 320

Query: 188 KTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYHEYID 247
           + L S     +K L + G++ +  + + E++    + N+ +Q  QK     P  YH    
Sbjct: 321 RDLKSAGKLQVKHLQLRGLFGVTKDHYDELIDLLNIDNKVKQTIQK-----PRFYHR--- 380

Query: 248 RSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIKQEEKLQADCRGCSLCVTRCEEC 307
               +S +    +D+++CPKC +   VYDC  E CK K  +K   +CR CSLC+ RC  C
Sbjct: 381 GEACVSCDDDRALDIEMCPKCQNFKLVYDCPAEDCKGK--KKGSEECRACSLCIQRCYHC 440

Query: 308 GGCVDDDEKEEAVCARTLCSSCWLQLPK 335
           G C+ D E EE  C   LC+ C    PK
Sbjct: 441 GRCIIDTEYEEMFCLELLCAVCSKPTPK 450

[Close]

BLAST of Spg008740 vs. TAIR 10
Match: AT3G27290.1 (RNI-like superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 8.6e-29
Identity = 88/267 (32.96%), Postives = 139/267 (52.06%), Query Frame = 0


Query: 65  GPPHEALFFVLSYLPLSELLSMSAVCVSLRDAVERDVLPWLHI-VVDLPLSYRLSDEILR 124
           G  H+A   VL YL L E+L++  VC SLRD+V ++   W  I + D  L YR++DE L 
Sbjct: 125 GEAHDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESLL 184

Query: 125 RIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKIFCIYTPQLYVPGCSSLTPGGV 184
           ++ R+A G +R L L  C  I+D GL +V+  NP LTK        L V GC  L+  G+
Sbjct: 185 KLTRRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTK--------LSVSGCLRLSTAGL 244

Query: 185 VRAVKTL-SQHSHNLKSLMIHGIYKIDNNEHLEVLKCHLLINRSQQLPQKQQQKQPLLYH 244
           V  ++ L S +   +KSL+  G       +  E+   +LL+    ++  ++++K+   ++
Sbjct: 245 VSTLRDLKSSNRLGVKSLITGGALYFTKEQFKEL---NLLLGGDAKVGLQERKKR---FY 304

Query: 245 EYIDRSKLLSDEYQPMIDVQICPKCNDIGRVYDCSRERCKIK-QEEKLQADCRGCSLCVT 304
                   L D+   + D++ICP C     V+DC  + C +K Q    ++ CR C +C+ 
Sbjct: 305 TSCRSEFYLEDD--RVTDLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIE 364

Query: 305 RCEECGGCVDDDEKEEAVCARTLCSSC 329
           RC ECG C++D E  +  C    C  C
Sbjct: 365 RCHECGSCLNDCE-NKPFCFAFSCVVC 374

The following BLAST results are available for this feature:

BLAST of Spg008740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906463.1	4.7e-146	76.10	F-box protein SKIP28 [Benincasa hispida]	[more]
XP_004150124.1	1.7e-132	71.07	F-box protein SKIP28 [Cucumis sativus]	[more]
KAG6579265.1	3.9e-132	75.23	F-box protein SKIP28, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023551551.1	3.9e-132	75.23	F-box protein SKIP28-like [Cucurbita pepo subsp. pepo]	[more]
XP_022939676.1	5.6e-131	75.23	F-box protein SKIP28 [Cucurbita moschata]	[more]

BLAST of Spg008740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZU90	1.2e-51	38.44	F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1	[more]
Q9LU91	2.1e-35	33.58	F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1	[more]
Q9LK24	1.2e-27	32.96	F-box protein At3g27290 OS=Arabidopsis thaliana OX=3702 GN=At3g27290 PE=2 SV=1	[more]

BLAST of Spg008740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSU6	8.4e-133	71.07	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G566290 PE=4 ...	[more]
A0A6J1FGL5	2.7e-131	75.23	F-box protein SKIP28 OS=Cucurbita moschata OX=3662 GN=LOC111445493 PE=4 SV=1	[more]
A0A6J1IEZ1	5.1e-130	74.31	F-box protein SKIP28 OS=Cucurbita maxima OX=3661 GN=LOC111472110 PE=4 SV=1	[more]
A0A5A7TYB5	7.6e-126	73.70	F-box protein SKIP28 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1CZ11	1.1e-124	71.60	F-box protein SKIP28 OS=Momordica charantia OX=3673 GN=LOC111015558 PE=4 SV=1	[more]

BLAST of Spg008740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01620.1	8.5e-53	38.44	RNI-like superfamily protein	[more]
AT3G26000.1	1.5e-36	33.58	Ribonuclease inhibitor	[more]
AT3G27290.1	8.6e-29	32.96	RNI-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 67..107 e-value: 1.4E-5 score: 24.8
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 67..107 score: 8.570165
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 71..269 e-value: 6.9E-8 score: 33.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..57
None	No IPR available	PANTHER	PTHR13382	MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B	coord: 48..365
None	No IPR available	PANTHER	PTHR13382:SF16	F-BOX PROTEIN SKIP28	coord: 48..365
IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	PROSITE	PS00198	4FE4S_FER_1	coord: 293..304
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 67..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008740.1	Spg008740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding