Spg008734 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATAAAAATAAAAAACCAAAATGATTATAAAACGATTCGGAAGAGAGCTCCCTTCAATGGGAGTTGGATCAGAGCGTGTCACAGGCCAGGGCAGGCCGAACTTCATCAAAATCTGCTTGGGCCATCCATTGTCACAGCTTCCATTTACATGACAATTAACAACTTCAGCCTTCAAAAATGTCCATTCCAATTCCCAACACTTCCATACCTATGGCGAGGCTCCTTATCTCCACCCGAACCTTCCCCTTTCCCCCTCTTCCCGTCGCTCCGGCACGGGCGTTCTTCAGACCCTACAGATTGTCACCGGCGGTCAGATTCTCCGGCGACCCATCGACCTCCAGAGCCCTACGAGTCGTGACGACTCGTGCCGGCGCCAGTACCAGTAGTTACATCTTCGCCTTCTCTATACCTTTCTCTCTTATTCTCGTCACTGTCCTCACTGCTCTTAAAATCGGCGATAACCTCGACAAGAAGTTTCTTGAAGAGGTACTTTGTGATTTCTAATTTGGCTCCATTTTGTTTGTGGGACTGAATTTGTTGGAGATTCTGGTTGGTTTCATTTCGTGTTTGGTTTAGATAAGATTTCCTGTAATGTTGAAGCTTGTGTGATATTAATGCAGATAACCTGTTTGATTTAAGGCTTACTGTTAAGGAAAATGACATTTTCATATTGAAAATGTTATTTTCCTTGAACTACGATTATGAAGTGTGTTATGGATTTCATACTTATGGGTTTTATGGTTGAACTAGCATTCATGTTTAAAATTAGTCTCTGGAGACATGGCTTGTCTTCTAACATGGTGGCACACCTGAACTAAGGTTGTGAAGTGTGTTACGAGTTTTTTTGAGGCCAAGTATTACAGGGTTGAGAAATTGTTACTAAGATGCATTTAAGCTAGCTCCATAAGTGCTAATTTTAATACTAAGATTGTTCTAAGTTGTTCTTGTGTGCACTCTCTTTTAAGTTGAGTGGGAGAAGAAAATAGGAAGAGATCGTTTTGATAAAAATACTATCTTCATCGAGAAGAAAAATGAAAGAATACCAGGATGAGGAGCGTCCAGTCAAGAATGATAAATCCTAACGCATAACTATAAAAGGACTTTGTCACCAACATCTAGAGAGCAACATGGAACCTACTAAGGACCCATACATTCTGATGGGTCCTTTCTAGGCCTCTAAAAACCCTCTAAAGAAAAAAGGGAAGATGGAAGAATATTAAACTCCACTTAAATGAGGTGAAAGCAATTTCTTAAAAGAGATTTTTTATCTCTCACTAGTCTCTACTTACTCGTTTCTTGGTTGTACTCCTTCGGAAGAAAGAAAAGAGTTAATTCTCATCCCATTAATGACATAGCTGTAGAGATTCCTTCTTTTTAAGTTTTCGTTACAGTGATTGAGATACACCCCCACCCAAAAGTTGCCCTGTTTGTGCATCAGTACTCAAAAGCTTTGCTTTTGTAGATTCATGGTCACTTGATTAGATGATCCCTCTCCCTAACACATGGATAATCTAGGTATTGGAGGACTTGTTCCTTGCATTATATATGCTCCGCCAGTTGACCTCGGGGGGGTAGCCTACTCAAGGGCCAGTTTCAAGAGACAAGGAGGATTTTAAATTACTAAGTTTCCTGCATAAGAGCTTGAACTTAGGACTTTGAAGGTATCTCAAAACATTTCAAGTCCTTTCCACCCTGGTCACCCATAGAGGTTAGGTAAAAGCAGAAAAATAGGAAGATGGCTCCATATACAAAGCTCTTGGATGAGTTTGATCATGACATTTCACTTCAAGTTCGCATACTTGTGATATAGAGATCAAAAGAACTTGATTCATTTTGTTGTATGGTGATCTGTTTTTGAGGCAAATTGATTCCTGTAACTGGTAAATGGGCACTGACTTTGTTGTATTTTGTTTGTGAACCAGCTTGCTCTTAACCAAGCCATCCTGGAGGAAGATGAGGAGAACAAAGATGGTAGTTCAGAAATATCTTTTGAAGAAAAACCAGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCTGAGGTATAAATAATTGCATTGTTTTTGGAGGTGAACATGAAAGGGATCAGACGGCAGAGAAATGGCTCAAGGAACTAGGAAGCTTCCATGTATATTGTATGTAATTGGTATTTTCCCCCCTTCTTTAAAATGATTAGTAAAAAGTTAGTTTGTATGCCAAGTAATTTCGATATTTAATAATATTGTTATATATTCTTCAAATTTGCTTCATTTCATTACACTTTGATTGAGGTTGCGTATCGTGAGAATTACAACGATGGCTAGTTGTTCATTCATGACAAGGTATTTCATCATTTCTAATATGTGAAAAGCCTTGCAATGAAAGTTTG ATGTCCATTCCAATTCCCAACACTTCCATACCTATGGCGAGGCTCCTTATCTCCACCCGAACCTTCCCCTTTCCCCCTCTTCCCGTCGCTCCGGCACGGGCGTTCTTCAGACCCTACAGATTGTCACCGGCGGTCAGATTCTCCGGCGACCCATCGACCTCCAGAGCCCTACGAGTCGTGACGACTCGTGCCGGCGCCAGTACCAGTAGTTACATCTTCGCCTTCTCTATACCTTTCTCTCTTATTCTCGTCACTGTCCTCACTGCTCTTAAAATCGGCGATAACCTCGACAAGAAGTTTCTTGAAGAGCTTGCTCTTAACCAAGCCATCCTGGAGGAAGATGAGGAGAACAAAGATGGTAGTTCAGAAATATCTTTTGAAGAAAAACCAGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCTGAGGTATAA ATGTCCATTCCAATTCCCAACACTTCCATACCTATGGCGAGGCTCCTTATCTCCACCCGAACCTTCCCCTTTCCCCCTCTTCCCGTCGCTCCGGCACGGGCGTTCTTCAGACCCTACAGATTGTCACCGGCGGTCAGATTCTCCGGCGACCCATCGACCTCCAGAGCCCTACGAGTCGTGACGACTCGTGCCGGCGCCAGTACCAGTAGTTACATCTTCGCCTTCTCTATACCTTTCTCTCTTATTCTCGTCACTGTCCTCACTGCTCTTAAAATCGGCGATAACCTCGACAAGAAGTTTCTTGAAGAGCTTGCTCTTAACCAAGCCATCCTGGAGGAAGATGAGGAGAACAAAGATGGTAGTTCAGAAATATCTTTTGAAGAAAAACCAGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCTGAGGTATAA MSIPIPNTSIPMARLLISTRTFPFPPLPVAPARAFFRPYRLSPAVRFSGDPSTSRALRVVTTRAGASTSSYIFAFSIPFSLILVTVLTALKIGDNLDKKFLEELALNQAILEEDEENKDGSSEISFEEKPALPRTRNRPKREAEV Homology
BLAST of Spg008734 vs. NCBI nr
Match: KAG7032638.1 (hypothetical protein SDJN02_06688 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 239.6 bits (610), Expect = 1.7e-59 Identity = 130/145 (89.66%), Postives = 135/145 (93.10%), Query Frame = 0
BLAST of Spg008734 vs. NCBI nr
Match: KAG6601944.1 (hypothetical protein SDJN03_07177, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 239.2 bits (609), Expect = 2.2e-59 Identity = 130/145 (89.66%), Postives = 135/145 (93.10%), Query Frame = 0
BLAST of Spg008734 vs. NCBI nr
Match: XP_022961614.1 (uncharacterized protein LOC111462310 [Cucurbita moschata]) HSP 1 Score: 238.4 bits (607), Expect = 3.8e-59 Identity = 129/144 (89.58%), Postives = 134/144 (93.06%), Query Frame = 0
BLAST of Spg008734 vs. NCBI nr
Match: XP_023525740.1 (uncharacterized protein LOC111789252 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 234.2 bits (596), Expect = 7.2e-58 Identity = 125/134 (93.28%), Postives = 129/134 (96.27%), Query Frame = 0
BLAST of Spg008734 vs. NCBI nr
Match: XP_038875344.1 (uncharacterized protein LOC120067823 [Benincasa hispida]) HSP 1 Score: 226.1 bits (575), Expect = 2.0e-55 Identity = 126/145 (86.90%), Postives = 129/145 (88.97%), Query Frame = 0
BLAST of Spg008734 vs. ExPASy TrEMBL
Match: A0A6J1HEK5 (uncharacterized protein LOC111462310 OS=Cucurbita moschata OX=3662 GN=LOC111462310 PE=4 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.8e-59 Identity = 129/144 (89.58%), Postives = 134/144 (93.06%), Query Frame = 0
BLAST of Spg008734 vs. ExPASy TrEMBL
Match: A0A6J1JTZ0 (uncharacterized protein LOC111487491 OS=Cucurbita maxima OX=3661 GN=LOC111487491 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 1.2e-55 Identity = 125/143 (87.41%), Postives = 130/143 (90.91%), Query Frame = 0
BLAST of Spg008734 vs. ExPASy TrEMBL
Match: A0A6J1FJ66 (uncharacterized protein LOC111444753 OS=Cucurbita moschata OX=3662 GN=LOC111444753 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.7e-49 Identity = 115/135 (85.19%), Postives = 120/135 (88.89%), Query Frame = 0
BLAST of Spg008734 vs. ExPASy TrEMBL
Match: A0A6J1K146 (uncharacterized protein LOC111489690 OS=Cucurbita maxima OX=3661 GN=LOC111489690 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 7.3e-48 Identity = 113/135 (83.70%), Postives = 117/135 (86.67%), Query Frame = 0
BLAST of Spg008734 vs. ExPASy TrEMBL
Match: A0A1S3CQ37 (uncharacterized protein LOC103503402 OS=Cucumis melo OX=3656 GN=LOC103503402 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 2.1e-47 Identity = 108/134 (80.60%), Postives = 115/134 (85.82%), Query Frame = 0
BLAST of Spg008734 vs. TAIR 10
Match: AT4G31560.1 (high chlorophyll fluorescence 153 ) HSP 1 Score: 84.7 bits (208), Expect = 6.5e-17 Identity = 62/140 (44.29%), Postives = 86/140 (61.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|