Spg008696 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008696
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein TIC 40, chloroplastic isoform X1
Location	scaffold10: 33084858 .. 33091817 (+)
RNA-Seq Expression	Spg008696
Synteny	Spg008696

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTACAACTTGGATCTGTACTAACCTTAACCTATCTGTGTGTTTCTTTTGCTCCTGTATATTTCATTGTAATTGAATTTCAGAAATATGCAATGCAACAAGCTTTCAAGACGATGATGTCTCAAATGAATTCTCAAAATAGCCCGATGAGTAATCCTACACTATCTGGCTCACCTTTTCCAATACCTCCTACATTTGGGACTGGCACGACAGTTTCTCCATCTGTTTCTGAATCCGCTGCATCAATTGATGTAACCGCAACAAAAGTTGAAGACGAACCTGTTACTAATGCCAAAATTGGGACAGAGAACAAAGAAGCAAAGAAGTTTGGTAACTAAGGATTCTCCTCCTATTACATTATTTCAATATGATGGTTCTTCTTGATTAATCAGATGTGATCTGATTTATGTGCTCCCAAGTGACAGCCCTCTTGACTGGAGGCTTGAATGTTTGGGATACAAATCTCAAGGTTTTCGTTTTAGTCCTTTTGATGAGCTTAAAAACTAATAATCTTTCAGTTTTTTATTGAATTTCTCTTGGTATTGGGGTGTGAACAGTACCTTCCATAACCTTCAGGATTAGTTGGGGAAGCGCCGGATACCTGCAACTAATTAATGAATTTTTTATATGATTTGTGCTCTTTCTTGTTCTTGTTCTAAAAAAATTACAAGCCATTTTGGTTCAAGTACTTTAATTGCGGTGTTGTCCTGGATATTGAACTACACTGCTATACGTATTACGTCTGTGTGTGGATATATATTTCCTTATTTTTTAGATGCCTCTGAGGAACTTTTGAAATTCAATTTTTTGTTGTCTAGGTGCAACATCCCACCACTCTGCCTATTGTAGGAGGCTTAGATAAATAGGTCCTTAATAAGATATGTAAAAGGACGTTTGACTAGCTCCACTCCTTAATGTCAAGGTGTTAATCTTTTTGGAATAGAACAGACTTCATAAGATCTAGTGGAATAGGTGATATGGCATAATCCCAATTATTCGCTTGTACCTGCACAGTAGTCTGCTAGTATTGTAAATATATGCACATGTTTTTAAATTGTAGGTGCTCCAGCCAGTCTGTGTGCTTCTCAACTAACTTTATAAGATATTAATTTGACTTTATGACATATGGCGTCAAAACTCGAAAGGATTTATAATATCTACTTCTCTTCACAGCTTTTGTAGACGTCTCTCCTGAAGAAACGGACCAAAAGAGTCCATTCAAAGAAGATGCAACAGACACAAGTGTTCCAAAGAGTGCTCAGCCTACTGAGGAAGTAAGTATATTTTTTTAGTAGTTGTGGTGGCTAGCGTTGATAGATTGATTTACTTTTTGATTTATTTATGAAGCTTCCACAGAATGGAGCTGCTTCTAAGCAGGCTTTTACCGGTTCTGAGGGATCACAATTCAGCGGTAAGTTCATAACAATAAATGATAATATTTCTTCATTAATGCCATTCCTTTTTTTCTCTCCCTTTTTTTCTCTCTGTACAAGTCCTACTTAAATAGAAAGCAAAGCCAAATAGCATGGCAACTCAAAACTAAGATCTTAGGCAAATATTTGATCTACATTTTGTCACAACCCTTATAAAATTTAATCCCATTATTTGATATGTCTGTCTCATTATAATAATTTACTTGATACTTCTGTGATCCTGTTGTTTTTGTGTTGCAAGGTCCATAATTCATGATTGAATGTATATTACTGCCGTTTAGTTATTACATAAAATTCAATAAAATCTCTGATATCCTCTTCTATTAGGAAAACCTGGCTCAGTCTTATCAGTGGAAGCTGTGGAGAAAATGATGGAAGATCCGACAGTGCAGAAGATGATATATCCGTATGCAGCTTTTACTCTTTATCTATTCTTAGAAAATTTTTAATTTTACATGATTTGTTTTCCCCACATATATGTATGTTTATATCAGTGGAAACACATTGCTGTATTCAAAATGAAAAGTAAATAATGCGTGGAAGTTGGCATTGCTTCACATATAAATGCAAAAAATTACAATATATCAAACCAATTTGGTAATAGTAATCCAAGGATGGCGACTTTAACCCCTGTAATCTTCCAGGTTCAGTCGTCCCAAACTCTACTTGCGATATAATAAAGTTCCACACAGAATAAGATCAATAGGACTTCTTCACAATCTCTTAGAGATTTTATTTTTAGCTTGATTTTTATACTGGATACTGCATGAGCTAAGCCCACATAATTTTTTATGATAGGAATTAAAAGTCCACCCGACAAAATGACTGTCGGATCTTCCATCATTTTTGTGCGCCCTTATCTCCTCAAGGAAATCTCGTAGGCTTCTTATCAACCAACTAAAGGATAGGCTTCTGATTTTCACTTATTTCATGTCTCTTAAGGCTAACTTTGGAAGATTCAGCCGTAGAAGTCTGTGAGAGTACTAGTTAGGGATATTTGGGGAATAGTATTAGAATGGTAGTATGAGTATAATAGTAATTAGCTAGGGTGCCTTGATTATAAATAGGAAAGTAGGAAGCCTTAGAGGGAGGAGAATTTTGGTATTGTCTCATAGTGGGACTTTGGGAGAGAATTAGCCCTCTCGAAAGGCTGTCGTTATATTGTAGTTCCGTTTCGACATTGCAATATATATATTAGTGTTTGAAGTTTTCTTAGGATACCTAACAGAGTCACATCAGGGAAATTCAAATGAAAGCTGCTTTAACTGTTTTTTGGATAACGGTTTCAGTAAATTCTATAATTACTTTCATTTTCTCTCTCAGTGAGGATCCTAACAACGGCCTCTTCCTGCCTGTTGATAAAGTGTCTCATCTACCATTAGTTGTTCTGAAAGAATGATGTACATATATTTACATGCCTTAAAAGAGGACCAGAACTGATAACCGAGATATAATGATGTCCGGGCACCAACTCTTTCTTTTCATTAAATTGAAGTTTTGGTCAGAAAACTCCATTATGCATGAATGTTAATTCTGTTTTCCACCCTGTCCTGGGTATTCAATGCCCTCTTATTTCTTAGGTGCATATCTTTTCTGCCTTTTGGGATACTTTATTGCTTGTCTTGTTGCATATGCATGTAATTTGTTTGACCATTGCCTGAAGCAGCTAAATTTTTTTAGGGTTTTAAATTTGATTCCTGAGTACTTGAAATTGTGTTAATTTCTGGAAGGAAGTGCACTTATTATTTATTTATTTTATCTTACAGCCATTTGCCTGAGGAGATGAGAAATCCAGAAACATTCAAGTGTAAGTCTATTCATTAATGCATCAGCAATGAGAAAGGATAGTATAAATCAATAAGATGAAGAAAGGGGCCCAGGGGTCTTCCTGCTTAAAATAGAAGAAGAAATCCTTTCTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGAGCAAATAAGAAGAAAATTAATGAACCAAAAAAAAAAAAAAAAACGAATGTGTGAACAAAGTGGCTTTGGTGAACGTATAGAATAAATTAACTTAAGTGGTGTTTAACAAGATGCAAGCCAAGTTTTTTAATTCTATTTTAATCTTCTAGAATAAAAATTTTGTGGTCTCTTAGACAATACAGGATTAACTTTATTATCAAATGGAGCTTGGAAGTATAACTTTTATAGCGTCACATGTTGTATATTATTCTTCAGCAGTCTCTCAGATATATAAAGGTAAAAGATATATTAATTAGCCTATATTTTTTTCCCATTTTTTTAATACTATTTAAATTTAGATGATTGATATTACTATCAAATTTGGAATTTCTAAACATTTTTTTTTTTTAAATTTCATAATCTAGAATAAAATTCTGAAGTTCCTGTGATTTTCTTTTGGGCATACTTGGGAGATTGGTAACTTAGTTTGATATTTTACTTGATCAGTTACTATATTGTCTAGTCTTCAACAAGGCATCGCTTATTAATTGAACTATATTGAATAGGGATGATGCAAAATCCACAATATCGTCAACAATTGGAAGAAATGCTGTAAGTAAAGTTTCTTTATTCTTGTTTTTTTTTTTCTTTAAAGAAATAATTATTTAGTTATATTTGAAGGCTTCTTATATATCGTGTTAGTTTGAATATTTGTGTCATAAGAACTACTGAGCAATTTTTGTGCTGTTGCTTTCTTTGCTTTTTTGTGCTTGCTCCTAAAATCTTGAAGTGGCTTGTGATGACAGTACCATCATTTTAAAAGTTTTTAAACTATACCCGAGTCCTTGTTTTTTATTTTATTGAAAATTTTGGTGGTGATGTTGGAATCAAATGTTTTCCCATTTAGGGTGATTCTGTTTAAATGCATAATGCAAGCGACTAAGAGGAGTCTCAAAGAGAGTTTCAATGTTCGGCTCACTTTAATCATCAAGAGTTAGTCGAATGGTTATTAGGGTGAAATGAGTTAAAATCCTATGGTGGCATTATGATATCAAAGTCTTATGAGTTAATCGACATTTAAATATTGTAAGGTCAGGATGTTTGTTGAGGAACATGTAAGTTGGCCCATACATTCCCAGTCATTGAGAAAACATATTTAAAAAGTTATTTTATAATTTGTAGAGTTTAATGATCTTCATTTGCAGAGTAATTAATTGTGCTTTTGGTTATTACATATATAACAATTAATATTATAGAATTTTATTTTTCATTTCATATATGCCATAGACGCCAAACTTTAATTAGACTGCTTCTGGTTCTACTCTCAATGCCCTTTCGTTTCCATCATCTTGGTCTATTGGGCAAGAGTTCCTAATATGTTTGAAGTATGTGACAACACTATCTTCTAACGTGATTCTTTTTCCTGCTTTAATTATTACTCTCAGTAACAATATGAGTGGAAGCCCTCAATGGGATGGCCGCCTAATGGATTCCTTGAAAAACTTTGATCTTAGCAGCCCTGAAGTTAAGCAGCAATTTGGTCAGTCAAGTTGATCTCTTTTTCTTTTGTACATTTTGTCAATAGTTATTTGGTGGGAGTTAAATTGCTTGATTACTATTCTATTCTCTAGTCGGGATTTGCTATGGTATCATATATTTCATATATAGCTGAAATGCGGACGATGTATATGATTTTCTGTGACCGATGTAATCATATAATGGCACTCTTAAAAAGTATGGACCAATATTTTGTTGTTTTGTTGTCAAAATAATTGATAGGCTCAGAGGTCTATGTAAACTTTCCTTCATTTTTGGTTTTCTGATACTAATGTTAGTTTCTCCTATCCCAATGCTGAAATTGATTTAAGTATATTCTTTGATATTGAGTTGCAAAATTACAATTCATGAATGCTCAGAATTTATAATTTCATTTATATCGATGAAATTATGAAGGGGTTTGAGTTACTTGGTGCCTGTTTGGAAATGAGATTTAAAACAGTTTCTCTTTTTGAGTATATAAAGTAGTTATCTATATTTTTTATTCTAATATGGAGTAGGAGTTTTCTATATTCTTTATTCTAATAGTTTTCTGCAATTTGAGGCTTACTCTTTATTCCTGGGACCTTGACAGATCAAATTGGGCTTACACCTGAAGAAGTTATTTCAAAAATTATGGCCAATCCAGAAATCGCAATGGCATTTCAAAATCCAAGAGTTCAAGCAGCCATCATGGATGTATGTTCAACCTAAGTTAATAACTTTTTGGTTCAAATCTAACATTTTGATTTTCCCTTTTGCAGTGCTCACAAAATCCACTGAGTATTACAAAGTATCAAAATGACAAAGAGGTACGTTAAACTTATATTGTTCTCGTGCTTCCATCTATCGCATAGTTTATATAGAGAACTCAAACTAAATAGAGTTATGCTGACTACACGTTGCCATGAACTCAGAATTTCACATTACTGATTCTGGTGGGAGGGTTCTTTTTGCAGATTGTTAGTGTATATTTTATGTAGTTAACTTGTTCATTCTCCAGTTTCAAAAAAAAAAAAAAAAAACTTGTTCATTCTCATCTTCACTTTAGGCCTTTTTAGTTTTCCATTCATGTCGATTCCATTTAACAATTATGAAATTGTAGTCCTATTTCAACTCTACTTTCTGTTGTGGAAGTAGCTCTATCGTTTAGCTGGGTAGTGCTTTCCTTTTTAGCTCCTTGTTTCATGTGTGCATATGCCTTCGTTTTTCAATTCCTGCTGTCGAAAATATCATCAATTAAAGAAAATAAAAGCATTACTTTAGAATTCAAGGACACGGTTGTACAACCTATAGAACGGATCCTGTTCAAGTAAGGTCGTGAAAATAAAAGCATTACGCTCATCACTTTACATTATGTTCTTCCACACATGTGCCGCAAATTGTTTCAATTCTTTGTTGAATACCCTGATGTTATTTTTGGGAAGATCAATATCGATTATCATTGCTTTATTTCTTTAAAAATGGAACAATACGATTCAGAATTCTAAATTTATACTCCGCTGATATCCTACCGTTTTTTTCCGTTGCGCTTTTAGGTCATGGACGTTTTCAATAAGATATCAGAACTATTCCCTGGAGTTTCTGGAGCACCATGATAGTTGTTGCTATTTAGTTACTGAAGAGTTCATGACAAGATGTGAATCAAATATGGAAGATTGTTGAGCATATGCTTCCCGTCCCATTGTAAAATAAGTGGAGAAGATAGTCATCTGCCTTTTCGAAATGAAGTTAGCTGCTTCAATTACATGAAATATATTGGATTTTTGGGTAAGCTAATTCTTTTTTCCTTTTTGAACAGTTCTTTTCTATGTATTACCATCTGGAGATCATGTATTTAATTTAGTGGTTTTGCATTTAAATCAACTTCATAGGAACCTATTTTTCACATAGTGGTTAGATTGTAAGAGTCTTGTAAGTTCCTTGATATATTAAGGTAGTCGATGTAATTTATAAGTAATTTTGGCATATTCTTATTTGCCTTCAATTGAACGACATTATTGCAAGTATTTGCTGAGTAAAAATGTCACTGCCCTTTATTGGGAAATTAGGAGTGAGATA

mRNA sequence

ATGTTACAACTTGGATCTGTACTAACCTTAACCTATCTGTGTGTTTCTTTTGCTCCTGTATATTTCATTGTAATTGAATTTCAGAAATATGCAATGCAACAAGCTTTCAAGACGATGATGTCTCAAATGAATTCTCAAAATAGCCCGATGAGTAATCCTACACTATCTGGCTCACCTTTTCCAATACCTCCTACATTTGGGACTGGCACGACAGTTTCTCCATCTGTTTCTGAATCCGCTGCATCAATTGATGTAACCGCAACAAAAGTTGAAGACGAACCTGTTACTAATGCCAAAATTGGGACAGAGAACAAAGAAGCAAAGAAGTTTGCTTTTGTAGACGTCTCTCCTGAAGAAACGGACCAAAAGAGTCCATTCAAAGAAGATGCAACAGACACAAGTGTTCCAAAGAGTGCTCAGCCTACTGAGGAACTTCCACAGAATGGAGCTGCTTCTAAGCAGGCTTTTACCGGTTCTGAGGGATCACAATTCAGCGGAAAACCTGGCTCAGTCTTATCAGTGGAAGCTGTGGAGAAAATGATGGAAGATCCGACAGTGCAGAAGATGATATATCCCCATTTGCCTGAGGAGATGAGAAATCCAGAAACATTCAAGTGGATGATGCAAAATCCACAATATCGTCAACAATTGGAAGAAATGCTTAACAATATGAGTGGAAGCCCTCAATGGGATGGCCGCCTAATGGATTCCTTGAAAAACTTTGATCTTAGCAGCCCTGAAGTTAAGCAGCAATTTGATCAAATTGGGCTTACACCTGAAGAAGTTATTTCAAAAATTATGGCCAATCCAGAAATCGCAATGGCATTTCAAAATCCAAGAGTTCAAGCAGCCATCATGGATGTCATGGACGTTTTCAATAAGATATCAGAACTATTCCCTGGAGTTTCTGGAGCACCATGA

Coding sequence (CDS)

ATGTTACAACTTGGATCTGTACTAACCTTAACCTATCTGTGTGTTTCTTTTGCTCCTGTATATTTCATTGTAATTGAATTTCAGAAATATGCAATGCAACAAGCTTTCAAGACGATGATGTCTCAAATGAATTCTCAAAATAGCCCGATGAGTAATCCTACACTATCTGGCTCACCTTTTCCAATACCTCCTACATTTGGGACTGGCACGACAGTTTCTCCATCTGTTTCTGAATCCGCTGCATCAATTGATGTAACCGCAACAAAAGTTGAAGACGAACCTGTTACTAATGCCAAAATTGGGACAGAGAACAAAGAAGCAAAGAAGTTTGCTTTTGTAGACGTCTCTCCTGAAGAAACGGACCAAAAGAGTCCATTCAAAGAAGATGCAACAGACACAAGTGTTCCAAAGAGTGCTCAGCCTACTGAGGAACTTCCACAGAATGGAGCTGCTTCTAAGCAGGCTTTTACCGGTTCTGAGGGATCACAATTCAGCGGAAAACCTGGCTCAGTCTTATCAGTGGAAGCTGTGGAGAAAATGATGGAAGATCCGACAGTGCAGAAGATGATATATCCCCATTTGCCTGAGGAGATGAGAAATCCAGAAACATTCAAGTGGATGATGCAAAATCCACAATATCGTCAACAATTGGAAGAAATGCTTAACAATATGAGTGGAAGCCCTCAATGGGATGGCCGCCTAATGGATTCCTTGAAAAACTTTGATCTTAGCAGCCCTGAAGTTAAGCAGCAATTTGATCAAATTGGGCTTACACCTGAAGAAGTTATTTCAAAAATTATGGCCAATCCAGAAATCGCAATGGCATTTCAAAATCCAAGAGTTCAAGCAGCCATCATGGATGTCATGGACGTTTTCAATAAGATATCAGAACTATTCCCTGGAGTTTCTGGAGCACCATGA

Protein sequence

MLQLGSVLTLTYLCVSFAPVYFIVIEFQKYAMQQAFKTMMSQMNSQNSPMSNPTLSGSPFPIPPTFGTGTTVSPSVSESAASIDVTATKVEDEPVTNAKIGTENKEAKKFAFVDVSPEETDQKSPFKEDATDTSVPKSAQPTEELPQNGAASKQAFTGSEGSQFSGKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFKWMMQNPQYRQQLEEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMDVMDVFNKISELFPGVSGAP

Homology

[Close]

BLAST of Spg008696 vs. NCBI nr
Match: XP_008463124.1 (PREDICTED: protein TIC 40, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 481.9 bits (1239), Expect = 4.2e-132
Identity = 267/321 (83.18%), Postives = 278/321 (86.60%), Query Frame = 0


Query: 4   LGSVLTLTYLCVSFAPVYFIVIEF-QKYAMQQAFKTMMSQMNSQNSPMSNPTL-SGSPFP 63
           +GS L    + V  + ++  V  + +KYAMQQAFKTMMSQMNSQNSPMSNP L SGSPFP
Sbjct: 99  VGSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPKLSSGSPFP 158

Query: 64  IPPTFGTGTTVSPSVSESAASIDVTATKVEDEPVTNAKIGTENKEAKKFAFVDVSPEETD 123
           IPPTF TGTTV+PSVSE AASIDVTATKVE+EPVTN K GTEN EAKKFAFVDVSPEETD
Sbjct: 159 IPPTFATGTTVTPSVSEPAASIDVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETD 218

Query: 124 QKSPFKEDATDTSVPKSAQPTEELPQNGAASKQAFTGSEGSQFSGKPGSVLSVEAVEKMM 183
           QKSPFKEDATD  V KSAQPTEELPQNGAASKQA+ GS+GSQFS KPGSVLSVEAVEKMM
Sbjct: 219 QKSPFKEDATDADVSKSAQPTEELPQNGAASKQAYIGSDGSQFSRKPGSVLSVEAVEKMM 278

Query: 184 EDPTVQKMIYPHLPEEMRNPETFKWMMQNPQYRQQLEEMLNNMSGSPQWDGRLMDSLKNF 243
           EDPTVQKMIYPHLPEEMRNPETFKWMMQNP YRQQLEEMLNNMSGSPQWDGRLMDSLKNF
Sbjct: 279 EDPTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNF 338

Query: 244 DLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMD-------------- 303
           DLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMD              
Sbjct: 339 DLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQND 398

Query: 304 --VMDVFNKISELFPGVSGAP 307
             VMDVFNKISELFPGVSGAP
Sbjct: 399 KEVMDVFNKISELFPGVSGAP 419

[Close]

BLAST of Spg008696 vs. NCBI nr
Match: XP_004148914.1 (protein TIC 40, chloroplastic [Cucumis sativus] >KAE8648338.1 hypothetical protein Csa_023106 [Cucumis sativus])

HSP 1 Score: 479.2 bits (1232), Expect = 2.7e-131
Identity = 265/321 (82.55%), Postives = 277/321 (86.29%), Query Frame = 0


Query: 4   LGSVLTLTYLCVSFAPVYFIVIEF-QKYAMQQAFKTMMSQMNSQNSPMSNPTL-SGSPFP 63
           +GS L    + V  + ++  V  + +KYAMQQAFKTMMSQMNSQNSPMSNPTL SGSPFP
Sbjct: 99  VGSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFP 158

Query: 64  IPPTFGTGTTVSPSVSESAASIDVTATKVEDEPVTNAKIGTENKEAKKFAFVDVSPEETD 123
           IPPTF TGTT+SPSVSE A SIDVTATKVE+EPVTN K  TEN EAKKFAFVDVSPEETD
Sbjct: 159 IPPTFATGTTISPSVSEPAVSIDVTATKVEEEPVTNVKSRTENMEAKKFAFVDVSPEETD 218

Query: 124 QKSPFKEDATDTSVPKSAQPTEELPQNGAASKQAFTGSEGSQFSGKPGSVLSVEAVEKMM 183
           QKSPFKEDATD  V KSAQPT+ELPQNGAASKQA+ GS+GSQFS KPGSVLSVEAVEKMM
Sbjct: 219 QKSPFKEDATDADVSKSAQPTQELPQNGAASKQAYNGSDGSQFSRKPGSVLSVEAVEKMM 278

Query: 184 EDPTVQKMIYPHLPEEMRNPETFKWMMQNPQYRQQLEEMLNNMSGSPQWDGRLMDSLKNF 243
           EDPTVQKMIYPHLPEEMRNPETFKWMMQNP YRQQLEEMLNNMSGSPQWDGRLMDSLKNF
Sbjct: 279 EDPTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNF 338

Query: 244 DLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMD-------------- 303
           DLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMD              
Sbjct: 339 DLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQND 398

Query: 304 --VMDVFNKISELFPGVSGAP 307
             VMDVFNKISELFPGVSGAP
Sbjct: 399 KEVMDVFNKISELFPGVSGAP 419

[Close]

BLAST of Spg008696 vs. NCBI nr
Match: XP_038877065.1 (protein TIC 40, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 478.0 bits (1229), Expect = 6.0e-131
Identity = 266/321 (82.87%), Postives = 275/321 (85.67%), Query Frame = 0


Query: 4   LGSVLTLTYLCVSFAPVYFIVIEF-QKYAMQQAFKTMMSQMNSQNSPMSNPTL-SGSPFP 63
           +GS L    + V  + ++  V  + +KYAMQQAFKTMMSQMNSQNSPMSNPTL SGSPFP
Sbjct: 97  VGSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPTLSSGSPFP 156

Query: 64  IPPTFGTGTTVSPSVSESAASIDVTATKVEDEPVTNAKIGTENKEAKKFAFVDVSPEETD 123
           +PPTF TGTTVSPSVSE AASIDVT TKVE+EPV N K GTEN EAKKFAFVDVSPEETD
Sbjct: 157 MPPTFATGTTVSPSVSEPAASIDVTVTKVEEEPVINVKSGTENTEAKKFAFVDVSPEETD 216

Query: 124 QKSPFKEDATDTSVPKSAQPTEELPQNGAASKQAFTGSEGSQFSGKPGSVLSVEAVEKMM 183
           Q SPFKEDATD  V KSAQPTEELPQNGAASKQAF GSEGSQFS KPGSVLSVEAVEKMM
Sbjct: 217 QNSPFKEDATDADVSKSAQPTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMM 276

Query: 184 EDPTVQKMIYPHLPEEMRNPETFKWMMQNPQYRQQLEEMLNNMSGSPQWDGRLMDSLKNF 243
           EDPTVQKMIYPHLPEEMRNPETFKWMMQNP YRQQLEEMLNNMSGSPQWD RLMDSLKNF
Sbjct: 277 EDPTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNF 336

Query: 244 DLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMD-------------- 303
           DLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMD              
Sbjct: 337 DLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQND 396

Query: 304 --VMDVFNKISELFPGVSGAP 307
             VMDVFNKISELFPGVSGAP
Sbjct: 397 KEVMDVFNKISELFPGVSGAP 417

[Close]

BLAST of Spg008696 vs. NCBI nr
Match: XP_008463125.1 (PREDICTED: protein TIC 40, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 470.3 bits (1209), Expect = 1.3e-128
Identity = 264/321 (82.24%), Postives = 275/321 (85.67%), Query Frame = 0


Query: 4   LGSVLTLTYLCVSFAPVYFIVIEF-QKYAMQQAFKTMMSQMNSQNSPMSNPTL-SGSPFP 63
           +GS L    + V  + ++  V  + +KYAMQQAFKTMMSQMNSQNSPMSNP L SGSPFP
Sbjct: 99  VGSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPKLSSGSPFP 158

Query: 64  IPPTFGTGTTVSPSVSESAASIDVTATKVEDEPVTNAKIGTENKEAKKFAFVDVSPEETD 123
           IPPTF TGTTV+PSVSE AASIDVTATKVE+EPVTN K GTEN EAKKFAFVDVSPEETD
Sbjct: 159 IPPTFATGTTVTPSVSEPAASIDVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETD 218

Query: 124 QKSPFKEDATDTSVPKSAQPTEELPQNGAASKQAFTGSEGSQFSGKPGSVLSVEAVEKMM 183
           QKSPFKEDATD  V KSAQPTEE   NGAASKQA+ GS+GSQFS KPGSVLSVEAVEKMM
Sbjct: 219 QKSPFKEDATDADVSKSAQPTEE---NGAASKQAYIGSDGSQFSRKPGSVLSVEAVEKMM 278

Query: 184 EDPTVQKMIYPHLPEEMRNPETFKWMMQNPQYRQQLEEMLNNMSGSPQWDGRLMDSLKNF 243
           EDPTVQKMIYPHLPEEMRNPETFKWMMQNP YRQQLEEMLNNMSGSPQWDGRLMDSLKNF
Sbjct: 279 EDPTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNF 338

Query: 244 DLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMD-------------- 303
           DLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMD              
Sbjct: 339 DLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQND 398

Query: 304 --VMDVFNKISELFPGVSGAP 307
             VMDVFNKISELFPGVSGAP
Sbjct: 399 KEVMDVFNKISELFPGVSGAP 416

[Close]

BLAST of Spg008696 vs. NCBI nr
Match: TYK08643.1 (protein TIC 40 [Cucumis melo var. makuwa])

HSP 1 Score: 468.0 bits (1203), Expect = 6.2e-128
Identity = 253/285 (88.77%), Postives = 257/285 (90.18%), Query Frame = 0


Query: 39  MMSQMNSQNSPMSNPTL-SGSPFPIPPTFGTGTTVSPSVSESAASIDVTATKVEDEPVTN 98
           MMSQMNSQNSPMSNPTL SGSPFPIPPTF TGTTV+PSVSE AASIDVTATKVE+EPVTN
Sbjct: 1   MMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVTPSVSEPAASIDVTATKVEEEPVTN 60

Query: 99  AKIGTENKEAKKFAFVDVSPEETDQKSPFKEDATDTSVPKSAQPTEELPQNGAASKQAFT 158
            K GTEN EAKKFAFVDVSPEETDQKSPFKEDATD  V KSAQPTEELPQNGAASKQA+ 
Sbjct: 61  VKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTEELPQNGAASKQAYI 120

Query: 159 GSEGSQFSGKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFKWMMQNPQYRQQL 218
           GS+GSQFS KPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFKWMMQNP YRQQL
Sbjct: 121 GSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQL 180

Query: 219 EEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQ 278
           EEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQ
Sbjct: 181 EEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQ 240

Query: 279 NPRVQAAIMD----------------VMDVFNKISELFPGVSGAP 307
           NPRVQAAIMD                VMDVFNKISELFPGVSGAP
Sbjct: 241 NPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 285

[Close]

BLAST of Spg008696 vs. ExPASy Swiss-Prot
Match: Q9FMD5 (Protein TIC 40, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC40 PE=1 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 4.5e-81
Identity = 181/324 (55.86%), Postives = 220/324 (67.90%), Query Frame = 0


Query: 22  FIVIEFQKYAMQQAFKTMMSQMNSQNSPMSNPTL-SGSPFPIPPTFGTGTTVSPSVSE-- 81
           ++    +KYAMQ A KTMM+QMN+QNS  +N    SGSPFP P    T    SP  S+  
Sbjct: 124 YVTSNLKKYAMQTAMKTMMNQMNTQNSQFNNSGFPSGSPFPFPFPPQTSPASSPFQSQSQ 183

Query: 82  -SAASIDVTATKVEDEPVTNAK-----------------IGTENKEAKKFAFVDVSPEET 141
            S A++DVTATKVE  P T  K                    E KE K +AF D+SPEET
Sbjct: 184 SSGATVDVTATKVETPPSTKPKPTPAKDIEVDKPSVVLEASKEKKEEKNYAFEDISPEET 243

Query: 142 DQKSPFKE--DATDTSVPKSAQPTEELPQNGAASKQAFTGSEGSQF--SGKPGSVLSVEA 201
            ++SPF    + ++T+ PK  +  E++ QNGA      T SE  Q    GK G  LSVEA
Sbjct: 244 TKESPFSNYAEVSETNSPKETRLFEDVLQNGAGPANGATASEVFQSLGGGKGGPGLSVEA 303

Query: 202 VEKMMEDPTVQKMIYPHLPEEMRNPETFKWMMQNPQYRQQLEEMLNNMSGSPQWDGRLMD 261
           +EKMMEDPTVQKM+YP+LPEEMRNPETFKWM++NPQYRQQL++MLNNMSGS +WD R+ D
Sbjct: 304 LEKMMEDPTVQKMVYPYLPEEMRNPETFKWMLKNPQYRQQLQDMLNNMSGSGEWDKRMTD 363

Query: 262 SLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIM---------- 305
           +LKNFDL+SPEVKQQF+QIGLTPEEVISKIM NP++AMAFQNPRVQAA+M          
Sbjct: 364 TLKNFDLNSPEVKQQFNQIGLTPEEVISKIMENPDVAMAFQNPRVQAALMECSENPMNIM 423

[Close]

BLAST of Spg008696 vs. ExPASy Swiss-Prot
Match: Q8GT66 (Protein TIC 40, chloroplastic OS=Pisum sativum OX=3888 GN=TIC40 PE=1 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 7.8e-81
Identity = 189/340 (55.59%), Postives = 227/340 (66.76%), Query Frame = 0


Query: 4   LGSVLTLTYLCVSFAPVYFIVI-EFQKYAMQQAFKTMMSQMNSQNSPMSNPTLSGS---P 63
           +GS L    + V F+ ++ +V    +KYAMQQAFK+MM QMN+QN+P  +   S     P
Sbjct: 99  VGSPLFWIGIGVGFSALFSVVASRVKKYAMQQAFKSMMGQMNTQNNPFDSGAFSSGPPFP 158

Query: 64  FPIPPTFGTGT-----------TVSPSVSESAASIDVTATKVE---DEPVTNAKIGTENK 123
           FP+P   G  T           T + S S+S  ++D+ ATKVE     P  N K   E K
Sbjct: 159 FPMPSASGPATPAGFAGNQSQATSTRSASQSTVTVDIPATKVEAAAPAPDINVKEEVEVK 218

Query: 124 -EAKKFAFVDVSPEETDQKSPFK--EDATDTSVPKSAQPTEELPQNGAASKQAFTGSEGS 183
            E KK AFVDVSPEET QK+ F+  +D  ++S  K A+   E  QNG   KQ F  S  S
Sbjct: 219 NEPKKSAFVDVSPEETVQKNAFERFKDVDESSSFKEARAPAEASQNGTPFKQGFGDSPSS 278

Query: 184 QFSGKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFKWMMQNPQYRQQLEEMLN 243
               K  S LSV+A+EKMMEDPTVQ+M+YP+LPEEMRNP TFKWMMQNP+YRQQLE MLN
Sbjct: 279 PSERK--SALSVDALEKMMEDPTVQQMVYPYLPEEMRNPSTFKWMMQNPEYRQQLEAMLN 338

Query: 244 NMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQ 303
           NM G  +WD R+MD+LKNFDL+SP+VKQQFDQIGL+P+EVISKIMANP++AMAFQNPRVQ
Sbjct: 339 NMGGGTEWDSRMMDTLKNFDLNSPDVKQQFDQIGLSPQEVISKIMANPDVAMAFQNPRVQ 398

Query: 304 AAIMD----------------VMDVFNKISELFPGVSGAP 307
           AAIMD                VMDVFNKISELFPGVSG P
Sbjct: 399 AAIMDCSQNPMSIVKYQNDKEVMDVFNKISELFPGVSGPP 436

[Close]

BLAST of Spg008696 vs. ExPASy TrEMBL
Match: A0A1S3CIG9 (protein TIC 40, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501349 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 2.0e-132
Identity = 267/321 (83.18%), Postives = 278/321 (86.60%), Query Frame = 0


Query: 4   LGSVLTLTYLCVSFAPVYFIVIEF-QKYAMQQAFKTMMSQMNSQNSPMSNPTL-SGSPFP 63
           +GS L    + V  + ++  V  + +KYAMQQAFKTMMSQMNSQNSPMSNP L SGSPFP
Sbjct: 99  VGSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPKLSSGSPFP 158

Query: 64  IPPTFGTGTTVSPSVSESAASIDVTATKVEDEPVTNAKIGTENKEAKKFAFVDVSPEETD 123
           IPPTF TGTTV+PSVSE AASIDVTATKVE+EPVTN K GTEN EAKKFAFVDVSPEETD
Sbjct: 159 IPPTFATGTTVTPSVSEPAASIDVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETD 218

Query: 124 QKSPFKEDATDTSVPKSAQPTEELPQNGAASKQAFTGSEGSQFSGKPGSVLSVEAVEKMM 183
           QKSPFKEDATD  V KSAQPTEELPQNGAASKQA+ GS+GSQFS KPGSVLSVEAVEKMM
Sbjct: 219 QKSPFKEDATDADVSKSAQPTEELPQNGAASKQAYIGSDGSQFSRKPGSVLSVEAVEKMM 278

Query: 184 EDPTVQKMIYPHLPEEMRNPETFKWMMQNPQYRQQLEEMLNNMSGSPQWDGRLMDSLKNF 243
           EDPTVQKMIYPHLPEEMRNPETFKWMMQNP YRQQLEEMLNNMSGSPQWDGRLMDSLKNF
Sbjct: 279 EDPTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNF 338

Query: 244 DLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMD-------------- 303
           DLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMD              
Sbjct: 339 DLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQND 398

Query: 304 --VMDVFNKISELFPGVSGAP 307
             VMDVFNKISELFPGVSGAP
Sbjct: 399 KEVMDVFNKISELFPGVSGAP 419

[Close]

BLAST of Spg008696 vs. ExPASy TrEMBL
Match: A0A1S3CIH5 (protein TIC 40, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501349 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 6.1e-129
Identity = 264/321 (82.24%), Postives = 275/321 (85.67%), Query Frame = 0


Query: 4   LGSVLTLTYLCVSFAPVYFIVIEF-QKYAMQQAFKTMMSQMNSQNSPMSNPTL-SGSPFP 63
           +GS L    + V  + ++  V  + +KYAMQQAFKTMMSQMNSQNSPMSNP L SGSPFP
Sbjct: 99  VGSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNSPMSNPKLSSGSPFP 158

Query: 64  IPPTFGTGTTVSPSVSESAASIDVTATKVEDEPVTNAKIGTENKEAKKFAFVDVSPEETD 123
           IPPTF TGTTV+PSVSE AASIDVTATKVE+EPVTN K GTEN EAKKFAFVDVSPEETD
Sbjct: 159 IPPTFATGTTVTPSVSEPAASIDVTATKVEEEPVTNVKTGTENMEAKKFAFVDVSPEETD 218

Query: 124 QKSPFKEDATDTSVPKSAQPTEELPQNGAASKQAFTGSEGSQFSGKPGSVLSVEAVEKMM 183
           QKSPFKEDATD  V KSAQPTEE   NGAASKQA+ GS+GSQFS KPGSVLSVEAVEKMM
Sbjct: 219 QKSPFKEDATDADVSKSAQPTEE---NGAASKQAYIGSDGSQFSRKPGSVLSVEAVEKMM 278

Query: 184 EDPTVQKMIYPHLPEEMRNPETFKWMMQNPQYRQQLEEMLNNMSGSPQWDGRLMDSLKNF 243
           EDPTVQKMIYPHLPEEMRNPETFKWMMQNP YRQQLEEMLNNMSGSPQWDGRLMDSLKNF
Sbjct: 279 EDPTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQLEEMLNNMSGSPQWDGRLMDSLKNF 338

Query: 244 DLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMD-------------- 303
           DLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMD              
Sbjct: 339 DLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMDCSQNPLSITKYQND 398

Query: 304 --VMDVFNKISELFPGVSGAP 307
             VMDVFNKISELFPGVSGAP
Sbjct: 399 KEVMDVFNKISELFPGVSGAP 416

[Close]

BLAST of Spg008696 vs. ExPASy TrEMBL
Match: A0A5D3C9U5 (Protein TIC 40 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold871G00040 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 3.0e-128
Identity = 253/285 (88.77%), Postives = 257/285 (90.18%), Query Frame = 0


Query: 39  MMSQMNSQNSPMSNPTL-SGSPFPIPPTFGTGTTVSPSVSESAASIDVTATKVEDEPVTN 98
           MMSQMNSQNSPMSNPTL SGSPFPIPPTF TGTTV+PSVSE AASIDVTATKVE+EPVTN
Sbjct: 1   MMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVTPSVSEPAASIDVTATKVEEEPVTN 60

Query: 99  AKIGTENKEAKKFAFVDVSPEETDQKSPFKEDATDTSVPKSAQPTEELPQNGAASKQAFT 158
            K GTEN EAKKFAFVDVSPEETDQKSPFKEDATD  V KSAQPTEELPQNGAASKQA+ 
Sbjct: 61  VKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTEELPQNGAASKQAYI 120

Query: 159 GSEGSQFSGKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFKWMMQNPQYRQQL 218
           GS+GSQFS KPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFKWMMQNP YRQQL
Sbjct: 121 GSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQL 180

Query: 219 EEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQ 278
           EEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQ
Sbjct: 181 EEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQ 240

Query: 279 NPRVQAAIMD----------------VMDVFNKISELFPGVSGAP 307
           NPRVQAAIMD                VMDVFNKISELFPGVSGAP
Sbjct: 241 NPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 285

[Close]

BLAST of Spg008696 vs. ExPASy TrEMBL
Match: A0A5A7VET2 (Protein TIC 40 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002380 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 8.8e-128
Identity = 252/285 (88.42%), Postives = 256/285 (89.82%), Query Frame = 0


Query: 39  MMSQMNSQNSPMSNPTL-SGSPFPIPPTFGTGTTVSPSVSESAASIDVTATKVEDEPVTN 98
           MMSQMNSQNSPMSNPTL SGSPFPIPPTF TGTTV+PSVSE AASIDVTATKVE+EPVTN
Sbjct: 1   MMSQMNSQNSPMSNPTLSSGSPFPIPPTFATGTTVTPSVSEPAASIDVTATKVEEEPVTN 60

Query: 99  AKIGTENKEAKKFAFVDVSPEETDQKSPFKEDATDTSVPKSAQPTEELPQNGAASKQAFT 158
            K GTEN EAKKFAFVDVSPEETDQKSPFKEDATD  V KSAQPTEELPQNG ASKQA+ 
Sbjct: 61  VKTGTENMEAKKFAFVDVSPEETDQKSPFKEDATDADVSKSAQPTEELPQNGVASKQAYI 120

Query: 159 GSEGSQFSGKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFKWMMQNPQYRQQL 218
           GS+GSQFS KPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFKWMMQNP YRQQL
Sbjct: 121 GSDGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQL 180

Query: 219 EEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQ 278
           EEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQ
Sbjct: 181 EEMLNNMSGSPQWDGRLMDSLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQ 240

Query: 279 NPRVQAAIMD----------------VMDVFNKISELFPGVSGAP 307
           NPRVQAAIMD                VMDVFNKISELFPGVSGAP
Sbjct: 241 NPRVQAAIMDCSQNPLSITKYQNDKEVMDVFNKISELFPGVSGAP 285

[Close]

BLAST of Spg008696 vs. ExPASy TrEMBL
Match: A0A6J1FIY5 (protein TIC 40, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444690 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 9.1e-125
Identity = 255/321 (79.44%), Postives = 269/321 (83.80%), Query Frame = 0


Query: 4   LGSVLTLTYLCVSFAPVYFIVIEF-QKYAMQQAFKTMMSQMNSQNSPMSNPTLS-GSPFP 63
           +GS L    + V  + ++  V  + +KYAMQQAFKTMMSQMNSQN+ MSN T   GSPF 
Sbjct: 99  VGSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFA 158

Query: 64  IPPTFGTGTTVSPSVSESAASIDVTATKVEDEPVTNAKIGTENKEAKKFAFVDVSPEETD 123
           +PPTF TGT VSPSVSE+AASIDVTATKVEDEPVTN K  TEN EAKKFAFVDVSPEETD
Sbjct: 159 VPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETENMEAKKFAFVDVSPEETD 218

Query: 124 QKSPFKEDATDTSVPKSAQPTEELPQNGAASKQAFTGSEGSQFSGKPGSVLSVEAVEKMM 183
           QKSPFKE+ATDT V KSAQP+ E PQNGAASKQAF GSEGSQFS KPG  LSVEAVEKMM
Sbjct: 219 QKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMM 278

Query: 184 EDPTVQKMIYPHLPEEMRNPETFKWMMQNPQYRQQLEEMLNNMSGSPQWDGRLMDSLKNF 243
           EDPTVQKMIYPHLPEEMRNPETFKWMMQNP YRQQLEEMLNNMSGSPQWD RLMDSLKNF
Sbjct: 279 EDPTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNF 338

Query: 244 DLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIMD-------------- 303
           DLSSPEVKQQFDQIG+TPEEVISK+MANPEIAMAFQNPRVQAAIMD              
Sbjct: 339 DLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQND 398

Query: 304 --VMDVFNKISELFPGVSGAP 307
             VMDVFNKISELFPGVSGAP
Sbjct: 399 KEVMDVFNKISELFPGVSGAP 419

[Close]

BLAST of Spg008696 vs. TAIR 10
Match: AT5G16620.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 302.8 bits (774), Expect = 3.2e-82
Identity = 181/324 (55.86%), Postives = 220/324 (67.90%), Query Frame = 0


Query: 22  FIVIEFQKYAMQQAFKTMMSQMNSQNSPMSNPTL-SGSPFPIPPTFGTGTTVSPSVSE-- 81
           ++    +KYAMQ A KTMM+QMN+QNS  +N    SGSPFP P    T    SP  S+  
Sbjct: 124 YVTSNLKKYAMQTAMKTMMNQMNTQNSQFNNSGFPSGSPFPFPFPPQTSPASSPFQSQSQ 183

Query: 82  -SAASIDVTATKVEDEPVTNAK-----------------IGTENKEAKKFAFVDVSPEET 141
            S A++DVTATKVE  P T  K                    E KE K +AF D+SPEET
Sbjct: 184 SSGATVDVTATKVETPPSTKPKPTPAKDIEVDKPSVVLEASKEKKEEKNYAFEDISPEET 243

Query: 142 DQKSPFKE--DATDTSVPKSAQPTEELPQNGAASKQAFTGSEGSQF--SGKPGSVLSVEA 201
            ++SPF    + ++T+ PK  +  E++ QNGA      T SE  Q    GK G  LSVEA
Sbjct: 244 TKESPFSNYAEVSETNSPKETRLFEDVLQNGAGPANGATASEVFQSLGGGKGGPGLSVEA 303

Query: 202 VEKMMEDPTVQKMIYPHLPEEMRNPETFKWMMQNPQYRQQLEEMLNNMSGSPQWDGRLMD 261
           +EKMMEDPTVQKM+YP+LPEEMRNPETFKWM++NPQYRQQL++MLNNMSGS +WD R+ D
Sbjct: 304 LEKMMEDPTVQKMVYPYLPEEMRNPETFKWMLKNPQYRQQLQDMLNNMSGSGEWDKRMTD 363

Query: 262 SLKNFDLSSPEVKQQFDQIGLTPEEVISKIMANPEIAMAFQNPRVQAAIM---------- 305
           +LKNFDL+SPEVKQQF+QIGLTPEEVISKIM NP++AMAFQNPRVQAA+M          
Sbjct: 364 TLKNFDLNSPEVKQQFNQIGLTPEEVISKIMENPDVAMAFQNPRVQAALMECSENPMNIM 423

The following BLAST results are available for this feature:

BLAST of Spg008696 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463124.1	4.2e-132	83.18	PREDICTED: protein TIC 40, chloroplastic isoform X1 [Cucumis melo]	[more]
XP_004148914.1	2.7e-131	82.55	protein TIC 40, chloroplastic [Cucumis sativus] >KAE8648338.1 hypothetical prote...	[more]
XP_038877065.1	6.0e-131	82.87	protein TIC 40, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_008463125.1	1.3e-128	82.24	PREDICTED: protein TIC 40, chloroplastic isoform X2 [Cucumis melo]	[more]
TYK08643.1	6.2e-128	88.77	protein TIC 40 [Cucumis melo var. makuwa]	[more]

BLAST of Spg008696 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMD5	4.5e-81	55.86	Protein TIC 40, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC40 PE=1 SV=1	[more]
Q8GT66	7.8e-81	55.59	Protein TIC 40, chloroplastic OS=Pisum sativum OX=3888 GN=TIC40 PE=1 SV=1	[more]

BLAST of Spg008696 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CIG9	2.0e-132	83.18	protein TIC 40, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501349...	[more]
A0A1S3CIH5	6.1e-129	82.24	protein TIC 40, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501349...	[more]
A0A5D3C9U5	3.0e-128	88.77	Protein TIC 40 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold871G00040...	[more]
A0A5A7VET2	8.8e-128	88.42	Protein TIC 40 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002380...	[more]
A0A6J1FIY5	9.1e-125	79.44	protein TIC 40, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of Spg008696 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16620.1	3.2e-82	55.86	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006636	Heat shock chaperonin-binding	SMART	SM00727	CBM	coord: 259..295 e-value: 0.15 score: 21.2 coord: 183..217 e-value: 5.1E-4 score: 29.4
None	No IPR available	GENE3D	1.10.260.100		coord: 259..290 e-value: 3.5E-9 score: 38.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..168
None	No IPR available	PANTHER	PTHR47296	PROTEIN TIC 40, CHLOROPLASTIC	coord: 25..305
IPR038108	RPN13, DEUBAD domain superfamily	GENE3D	1.10.2020.20		coord: 151..257 e-value: 2.1E-12 score: 48.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008696.1	Spg008696.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane