Spg008684 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008684
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	mediator of RNA polymerase II transcription subunit 23
Location	scaffold10: 37613138 .. 37621103 (+)
RNA-Seq Expression	Spg008684
Synteny	Spg008684

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTATTGTTTAACTTTAACCACAAAGCCAAATGCTATGGTGGCAGATGTTTGGACATCAATACAATCGGCTTGGGATCTCAACCCTCGTTGCATCTTAATGAGTTTGAAACAAATGAATGGGCAAATCTTTCACATCCCCTGTCTTCTATTACATTGCGGGGTATGAATGATTCTTGGTATTGGCCTCTTGATCCATCCAAGTTATTTTCCGTCTAATCTCTGATGGTTGATCTTCTGGGTGTTGCTAATAACACTTCGAACAATCTGTATTCGTTAATATGGAACGATGCTTATCCTAAATAGATAAAAATCTTTCTATGGGAGCTTAGTCTTGGAGCTATTAATACGACAGATCGTCTTCAAAGTAGAATGCCTTATTGTCATCTTTTGCCATCATGGTGTGTTATGTGTTCTTCATACGTGGAGAAACTTGTTCCTTTGCTTCTAGATATTGGGCCTCTATTGTTGATGCATTTGGTTGGTATTTACCTATGTCGGTTAACATTCATGATTTTTTGACATCTATTTTTGTGGGACATCCTTTCCATAAAACGAAGAAGACTTTATGGTTCGCCTTCAATAGAATTTTTTTCTGGTCTCTTTGGGTGGAACAAAATGGAAGAATTTTCAGGGATATTTTCTCAACTTTTGAATACTTTTTTGATAAGATTATTTTCTATGCGATGTATTGGTGTAAATATAAACACCCTTTTGCTTCTTATGGTCTTTCTTCATTGATCTCTAATTGGAAAACTTTCATGTAATCCACCTTTAGGTGTTGGGGTTTTCCCTTATTTCATTAATCAATGAAATTTTGTTTCTGCTCAAGCAAAAAAAAAATAAATAAAAAAGAGAGAGAAGGGAGTTGTATCTTCAATTAGACCACTAAGTTGGCTCCAACAATTACACATCATTAAGAAAGACATGTTTGCAGCGACACTTCCAATTTTATAAAAATCTTTCTTTGATATATTGGGGGATTTTGTCCTTATTTTTGTACTATATTCTTACTATGAAATCTTGTTTATATAAATTCTTTCCATTTTCTGATGCATGTTTTTGGTATCATCTCCAGGTGATCGCATGATGGATTATATGAACATGGATGACAGATCAATTGGGATGTTTTGGGTTGTCTCATACACCATGGCGCAGCCAGCATGTGAAACTGTGATGAATTGGCTATCTTCTGCTGGGGTTCCAGAATTATCATCAGCACAAAATTTACAGACCAATGAGAGGATAATGGTTATGCGAGAAGTGAGCCCATTGCCAATGTCTTTGTTATCAGGTTTTTCAATGAACTTGTGCTCGAAGCTGACCTTTCAAATGGAAGAATCTTTATTTTCTGGACAGGTATATATACTTTTCTTAATAAAATTTACACGATAATTTACGTGGCCTACTTCGTATCAAGCTATTGATATGAAAACCTAGTAAATTGGAATTAGGAACCTTTGGATATGTGAACTCTAATTCGCAAATACTAAAACCTCCAAAATAATTCGACTTCAACCCTAAGGATTAGGTTAGACATGAATTGCCTTGAGATCAAAAGCTCTTTAAGATAAGGAATAAGTTCCTTGCCCCAAGAGTTAAACATTCTACAAGATTGGACGATCAATCCTACTTGAGTGTTTGAATGTTGTTGGCATGCAACTAAAAACATGAACTGGAAAAGGGGTTTAAGAAACTCTTGACTAAACTTGAAAGGAAAAGCACAAAGGCTAACTCAAATCATCGTTATCTCTCCAAAACAACCTAATGGCAAGACTTTAGATAGTCTCCCCAACAAATTCTAAATGTTACATCATCAACCAAGGGAAAAAGACAAAGTTATTCCTATTTAATATGTACTAGAAAAGATAAAGTTGAAAAACAATAAAATTACATCAAAATTATTAAATAAAAATTTAAAGAGCAATACATTGAAGGAATAACTATGTTTCTCTCTAAAAAATTAAAAAAAAAAGGGGAAAAGTCCTTAGCTCTCAATGACAACTCTCTCTTTCTTGTCTCCCCCTCCCTTTTCGTCTACCGTTTGATCTTGTCATGCCTCCCCTCTCATCCACTGTGTTTTTTCCTTCCCTCTCCTTGATGTTGTTTTTAGTTTGTGATAGCCATGACGTCGAAAATAGCTTGTAAGCATAGTGTTGAAAGGAAAGTTTTCGCTGTGGATTTTAGCAAGGAAAAAAACAGTAGGTTTGTGGTCCTAACAGAGAAGAATCATGCTATGTTCTTGGAAATGGTGCTTGGAAGAAGTTTGATCATTTGATTAGTGGATCTGCTAGATGATTTGCTCATCATCCTTCTCAATCAAAAGTTTCGTAGGAAGACTTTATGTGAGAATGGCTTTATTTGGGTGTAGAAAGTCTTGAATAAAAGAGGGGTTTTTGCAAAGGTCTCTAGAGTTTTTTCGTGAGGAAAAAGAATTAACTTGATTATCTCCCAAGGAGAAGACTCTAGGGGCTGGCAACCTTTTGTGGGAATGGTTAACAAGTTTTTTAGTGGTAAGATGGGCATGGAAGCGAAGGATGATAGCTCGGATAGTAAGAACTCGCAGGGTCAGACTCCTAAATCCTATTGTGAGGTGGTGAAGTCAAATAGAAACAAAGTGGTAGCAAAGTAATCCTATAGTGAGGTTTAGAATGTTTAAGAAAAAGTTAAGGATTCTGATCATGCACTAAAGTATGTTGCAAACACGGCAAAAGAGCGAGGGTGTAGAAGAATCTTCTCGGACCAAACTTTGGTGGTTACAATAGGGTGCTTTCATGATGAATGGATTCAGATTTATGAAACTCTCTATGATGCTTTTCAAAAAGGAGTTGATCATTATTTCCTTTCGATTGGATAAAGCGTTCCTGAAGTGTCTTGATGCTGACTTTGCCAGAATCGTTGCTCAAAACAAAGGATGGATTGTGATAGGGAATTTTACTTCAATGTTTGAGTTCTGGAAAGGACAACATGGAAGAATTAATGTTGTCCCCTCTTTCAAAGGTTGGCTAAAATTTCAAAACATTCCTCTTCAATTATGGAGTATGAAGACATTTAAGGCGATTGGAGATGAGTGCAGTGGCTTCATTGAATGAAATGCTCTTCCTTGGTAGGTTGTAAGTAAGTTATTATTAAAGTTAAGAATAATTAATGTGGTTTTAGTCCAACGGAAAGTGAAATCACTCAGAGTCCACCCAAGTCAAGCCCACCCCATGGGTTTGGGTTATACTTCTTAAACTCATGTCCTAAATAAGGGGTGGGCTTCCAAGTCAAGTCCACCTGATAACACAAACATGCTTTGAGTGATTTATTTCAATCTCATGATATAGTAATCTCAACTAAGTGCATACATTTTATTGTAAGAAGCTCGTGGTGTATGACTCATGTCCTAAATAAGGGGTGGACTTCTGAGTCAAGCCCACCTGATAACACAAACAGGCCCAACGTATAGTAAAATTGGATCCGTGATCTGTATGACCTACATAATTCTCTTACTTCTCTATTAAACATTTGAGTGATTTAGTTCAATCTCATGATATAGTAATCTCAACTAAGTGCATACATTTTATTGTAAGAAGCTCATTGTGTACATATTAAGGATGCTGCTTGAGTTTTTATGCACTCTGTCACTAACGGGGTGGGTAATGTAATTTAGGGGTTCAGTATTTTTAGAATATTCCAACTTATCTCTAACGTTTACTCCTATTATTTTTCTGTGTAGGTTGTTCCTAGTATTGCATTGGCTGAGACATATACAAGATTGCTTCTCCTCGCACCTCACTCATTGTTTCGTTCTCATTTTAATGTAATTTTCTTGATCTTTTAAAACCTTGTTACTTATATTACTCTCATCTTTCACTTTGAGCATCAATTAATTGTTTTGTTGATATATAAAAAACAATCAACAATTTATAAAACTTACAGATCAGAGAAAAACTCAAGGATAGTTTGGGGGGTGGGCAGAAGTCTTAAGCCTGAGTCTAGTAAGGTTGGGATATCAAATGGAGGGTTTGGATAGCCTATATAACAATTTGTATAAAACTGTGATTGAGGGTACGAGTTTAGAAAGTTCAATTTAGACAAATTGTTTGTGGACTTCAACAGTGTGTTATTTATCATGTTCTAGGTTTATGAACCCAATTCTAAGCTTGGAAAACCCTCAACCCAAATGTGGTTAGACTTAGAAAACCAAATCCACCCAAGCCTAAACCAGATTCCAAAGGCCCCTCAAGGAGCTTACAAGAGGACTCCCCTGTTAGGTCTAACAAATGTTGGGAAGTTAATAGTAGTAAATACCTGAGCTAGAACTCCCAAGAGAAGCAACGACAAATACTCTCTGATATCTGTGATATGAAGTCCAAAATCGTCCTCCACTTTTTAAGATATTCATCCTTCCAAAATCTTGAACTAGACATAGGGGTTGTTGAGGTGTTCCTTCTCCACCCTCCTTTTCGTGGAAGAGAAATTTTTGTGGTAGGTTGAGGTGTGTGATGTTCTGTGGGGAATTTGGAGGGAGTAGAATAACAGAGTCTTTAGAGGGCTTGAGAGGTTTTGGAGTTACGTTTAGGCTCTTATGAGGTTCAACGTCTCTCTATGAGCTTAGGTGGCTAAGCCGTTTTATAATTACTCATTTGGTTTTATTTTGCTTGATTGGAGGCTCTTTCTCTAGTTTACCTCATTTTTTGTGGGCTCTCTTTTTTGTATCCCATGAATTCTTTCATTTTTCTTCAGGAAAGTTAAACTATTTAAAGAAAAAAAGTGATCATTAGAAAGGTTTGTTAAAAAAGAATCTCCTTCAGGTTTGCATTCAGATCTTTACAAATGTCCGTCAAATGAATGAAGTTGCCAATTTACGAGCTGTCTGATTTTTATTACTTTCTTATGTTTAATATTTTGCATTATGTGTTGCACATCTCTTGCTCAACTCACTCTTTACTGCAGCATTTAGCACAAAGAAATCCATCTCTATTGAGCAAACCAGGAGTTACGCTTCTAGTGCTTGAAATTCTAAACTATCGGTTGCTTCCTCTTTACAGGTATAACCTCCCCCCCACACTCCACCCCACCAAAAAAAAGGGATGGAAAACAATTTATAGATGATTAAATGTCTGGTATGTATTAATAACATATATAGGTTTTAATAAATAAAAAAAATACATGGGGGATTTTATGGCTTACACTGGATACAGGTGACATTGAAACCAATTTACACTAAATTACACTGGTAGAGCTTTAAATATTATGATATATACAAGATTTTTGATATCTTATATGTGACGAGATAAGGATGTTACTATTTTTTTTTTAATAAAAAAAACTTATATTCCTTCTCTCTTATAGGTACCAAGGCAAGAGTAAGGCTTTGATGTATGATGTGACAAAAATAATTTCTGCACTTAAAGGAAAGCGTGGAGACCATCGTGTATTTAGATTGGCTGAAAACTTGTGCATGAATCTTATTTTTACATTAAGAGATTTTTTCTTTGTGAAAAGGGAAGGGAAGGTGGGTGAACAAAATGATCTCAAACCAGAATTATAAGTTATATTGTGTGTTTCATTTGCATTGTTTCACTGAAATTGATCTCTCTCTGTTTGGAAGGGTCCAACTGAATTTACAGAGACACTAAATCGATTAGCTGTGGTCACTCTTGCTATCCTCATTAAAACACGTGGAATAGCTGATGCTGATCACTTGCTTTATCTTCAAACAGTGCTAGAGCAGACAATGGCCACCAGCCAACATACTTGGTCAGAAAAAACTCTGCGATACTTCCCGCCTATTCTTCGTGAAGCTTTGATTGGAAGGATAGATAAAAGAGGTGCAGCTATCCAAGCATGGCAGCAGGTTTGTTATCTCACCAGAGTTTTTTCTTAACTATCCTAGTCTAACCTAATCCTTAGACATTAAAAATTTCTTAACTATTCATGTTTGTTATCCAAGCATGGCAGCAGGTTTGTTAACTATCCTAATAGAGTTTTTTCTTAAAATTGGCCTCAAAACCCAGTTATATGTGGTGATTGTGAAGACATGATGAATCTTTTGAAGTTCTTAAAATTACCTGTACCGTTGTTGACACTCAATAGGTCAATTTTTTAATATCTTCTACAATAGAATATAGACTAAGAAGCACATACACTTTAGTTTGGTTAGCATGTCCATGTCCGACACGTGTCCGACACTTTTTGGACACGTATCAGACACTTGTTAGTACAATTGATCTGTGGCAAACACTAGTTGTAGGTTCATTTCAAACCCTTGTTAAGTATACTAAATAGACACGATGCTTAAATGACAAAAATAATAAAATTTAAGAGTAAAATATATTAAATTCATTTTTTCAAGCATACAAATGCATAAACTTATTGATTTTGAATTTCCTTCTAGTATAAAAACGATATATATTTTAAAAAATGTATATTTTTCTAAATGTGCCCTTGCTGTGTTCGTGCCCTAGATTTCAAAAAAATGACGTGTCACCGTGTCCGTGTTGTGTCGTATCCGTGTCTCGTGTCCGTATCCGTGCTTCTTAGAATATAGATGTAGCAAAAATTGACATATCTAGAATGTGTCAAAGCCTTTAATTCTCGGTTTCTTATAAAAAAAAAGAATGCTTGAAAGGTTTATACATTAAAAAGTTAGGTTGTGTTACTTTTAAAATCTGGAAATTTATGTAACCCTCTCCTCATTAGAAAATGAAAAATACTGAGTTGATATTTTCAACCATCATTTGCAGGCAGAAACTACAGTGATCAACCAATGCAACCAACTTCTTTCCCCATCAGCTGATCCGACGTATGTCATGACCTACATCAGTCATAGTTTTCCGCAGCATAAACAATATCTATGTGCTGGTGCATGGATACTTATGCAAGGGCACCCTGAAACTATTAACTGCACAACCTTGGTATGAATTTCCGTCTCATTCTTTATATACATCAGTACATTTGCCCATTTAGTTGATTTTAACTTTTTGACAATGTATGCATGTTATGATTATTTTTGCTCCACTATTTCATTCATGAATGAAATTTGTTTCTCTTCTAAAAAAAAGTTTTATCTATTAATTTAGGCACGGGTATTGAGAGAATTTTCACCGGAAGAAGTAACAGCTAATATTTACACAATGGTCGATGTGCTGCTTCATCACATTCAGATCGAACCTCAGCATGGACATTCCACACAGGTATACATACTGGCCTAGCTTATATGCAGTTTCTACTAATCGAATGGAGGACCACCTCCTAACTCTCCAATATTTATGGTTAGGAACTTATGGCACACTAATATCCCTAATAGATAGCCACTGGAACATACATGACCTTAAGAGCATATGAGGTCCATATTAGATGGCCAACCCATGGTCTTTGCATAATATTACTACTGAGGTCTATATGTTCTTAGGACAACACTTTTAAGTTCGGATTTGGCAGCTCGCATTAAGACTTTGCAAGAATTGTCAATGGTTGGCTAATTCAATAGAAATTTCATTAATCTAAAATCTCCATCCAGTTCTATTTAGCAGCTGGGAGGAAGCGGAGTACTACGTTATTCTGCCAAAAAATGTAAAATACAAAAAAAAAAAAGAAAAAAAGAATGTAAGAAAGAATTAAAAAGGGAAAAAATGAAAAAAAAAAAAAAAAGCTACTTATGTCTTACAAACGCCCTCTCATTTCTCTTTCAGGATATTTTGCTTAAAGTTTGTGCCAATCTTTCATTTTTCGTATGGACTCAAGAATTACTTCCTCTAGATATTCTGCTCCTAGCTTTCATTGACCGTGATGATGATCCCAATGCTCTACGCATAGTGGTATGCCCTTCAAACTCCCTTTTCTTTTGCACTTTGGCTCCAGAGAATAATGAGCTACTATATTTGGAAATATCGTTCTGTATGGTATATCACTGATTTTGAGCAGGTTGTTTCCTGATTTGAAGATTGGTGTTGAATATGGTTCTTATCTTACTTAG

mRNA sequence

ATGGCTCTATTGTTTAACTTTAACCACAAAGCCAAATGCTATGGTGGCAGATGTTTGGACATCAATACAATCGGCTTGGGATCTCAACCCTCGTTGCATCTTAATGAGTTTGAAACAAATGAATGGGCAAATCTTTCACATCCCCTGTCTTCTATTACATTGCGGGATCGTCTTCAAAGTAGAATGCCTTATTGTCATCTTTTGCCATCATGGTGTGTTATGTGTTCTTCATACGTGGAGAAACTTGTTCCTTTGCTTCTAGATATTGGGCCTCTATTGTTGATGCATTTGGTTGGTGATCGCATGATGGATTATATGAACATGGATGACAGATCAATTGGGATGTTTTGGGTTGTCTCATACACCATGGCGCAGCCAGCATGTGAAACTGTGATGAATTGGCTATCTTCTGCTGGGGTTCCAGAATTATCATCAGCACAAAATTTACAGACCAATGAGAGGATAATGGTTATGCGAGAAGTGAGCCCATTGCCAATGTCTTTGTTATCAGGTTTTTCAATGAACTTGTGCTCGAAGCTGACCTTTCAAATGGAAGAATCTTTATTTTCTGGACAGTTTTTTAGTGGTAAGATGGGCATGGAAGCGAAGGATGATAGCTCGGATAGTAAGAACTCGCAGGGTCAGACTCCTAAATCCTATTGTGAGGTGGTGAAGTCAAATAGAAACAAAGTGGTAGCAAAATTTATGAAACTCTCTATGATGCTTTTCAAAAAGGAGTTGATCATTATTTCCTTTCGATTGGATAAAGCGTTCCTGAAGTGTCTTGATGCTGACTTTGCCAGAATCGTTGCTCAAAACAAAGGATGGATTGTTGTTCCTAGTATTGCATTGGCTGAGACATATACAAGATTGCTTCTCCTCGCACCTCACTCATTGTTTCGTTCTCATTTTAATCATTTAGCACAAAGAAATCCATCTCTATTGAGCAAACCAGGAGTTACGCTTCTAGTGCTTGAAATTCTAAACTATCGGTTGCTTCCTCTTTACAGGTACCAAGGCAAGAGTAAGGCTTTGATGTATGATGTGACAAAAATAATTTCTGCACTTAAAGGAAAGCGTGGAGACCATCGTGTATTTAGATTGGCTGAAAACTTGTGCATGAATCTTATTTTTACATTAAGAGATTTTTTCTTTGTGAAAAGGGAAGGGAAGGGTCCAACTGAATTTACAGAGACACTAAATCGATTAGCTGTGGTCACTCTTGCTATCCTCATTAAAACACGTGGAATAGCTGATGCTGATCACTTGCTTTATCTTCAAACAGTGCTAGAGCAGACAATGGCCACCAGCCAACATACTTGGTCAGAAAAAACTCTGCGATACTTCCCGCCTATTCTTCGTGAAGCTTTGATTGGAAGGATAGATAAAAGAGGTGCAGCTATCCAAGCATGGCAGCAGGCAGAAACTACAGTGATCAACCAATGCAACCAACTTCTTTCCCCATCAGCTGATCCGACGTATGTCATGACCTACATCAGTCATAGTTTTCCGCAGCATAAACAATATCTATGTGCTGGTGCATGGATACTTATGCAAGGGCACCCTGAAACTATTAACTGCACAACCTTGGCACGGGTATTGAGAGAATTTTCACCGGAAGAAGTAACAGCTAATATTTACACAATGGTCGATGTGCTGCTTCATCACATTCAGATCGAACCTCAGCATGGACATTCCACACAGGATATTTTGCTTAAAGTTTGTGCCAATCTTTCATTTTTCGTATGGACTCAAGAATTACTTCCTCTAGATATTCTGCTCCTAGCTTTCATTGACCGTGATGATGATCCCAATGCTCTACGCATAGTGATTGGTGTTGAATATGGTTCTTATCTTACTTAG

Coding sequence (CDS)

ATGGCTCTATTGTTTAACTTTAACCACAAAGCCAAATGCTATGGTGGCAGATGTTTGGACATCAATACAATCGGCTTGGGATCTCAACCCTCGTTGCATCTTAATGAGTTTGAAACAAATGAATGGGCAAATCTTTCACATCCCCTGTCTTCTATTACATTGCGGGATCGTCTTCAAAGTAGAATGCCTTATTGTCATCTTTTGCCATCATGGTGTGTTATGTGTTCTTCATACGTGGAGAAACTTGTTCCTTTGCTTCTAGATATTGGGCCTCTATTGTTGATGCATTTGGTTGGTGATCGCATGATGGATTATATGAACATGGATGACAGATCAATTGGGATGTTTTGGGTTGTCTCATACACCATGGCGCAGCCAGCATGTGAAACTGTGATGAATTGGCTATCTTCTGCTGGGGTTCCAGAATTATCATCAGCACAAAATTTACAGACCAATGAGAGGATAATGGTTATGCGAGAAGTGAGCCCATTGCCAATGTCTTTGTTATCAGGTTTTTCAATGAACTTGTGCTCGAAGCTGACCTTTCAAATGGAAGAATCTTTATTTTCTGGACAGTTTTTTAGTGGTAAGATGGGCATGGAAGCGAAGGATGATAGCTCGGATAGTAAGAACTCGCAGGGTCAGACTCCTAAATCCTATTGTGAGGTGGTGAAGTCAAATAGAAACAAAGTGGTAGCAAAATTTATGAAACTCTCTATGATGCTTTTCAAAAAGGAGTTGATCATTATTTCCTTTCGATTGGATAAAGCGTTCCTGAAGTGTCTTGATGCTGACTTTGCCAGAATCGTTGCTCAAAACAAAGGATGGATTGTTGTTCCTAGTATTGCATTGGCTGAGACATATACAAGATTGCTTCTCCTCGCACCTCACTCATTGTTTCGTTCTCATTTTAATCATTTAGCACAAAGAAATCCATCTCTATTGAGCAAACCAGGAGTTACGCTTCTAGTGCTTGAAATTCTAAACTATCGGTTGCTTCCTCTTTACAGGTACCAAGGCAAGAGTAAGGCTTTGATGTATGATGTGACAAAAATAATTTCTGCACTTAAAGGAAAGCGTGGAGACCATCGTGTATTTAGATTGGCTGAAAACTTGTGCATGAATCTTATTTTTACATTAAGAGATTTTTTCTTTGTGAAAAGGGAAGGGAAGGGTCCAACTGAATTTACAGAGACACTAAATCGATTAGCTGTGGTCACTCTTGCTATCCTCATTAAAACACGTGGAATAGCTGATGCTGATCACTTGCTTTATCTTCAAACAGTGCTAGAGCAGACAATGGCCACCAGCCAACATACTTGGTCAGAAAAAACTCTGCGATACTTCCCGCCTATTCTTCGTGAAGCTTTGATTGGAAGGATAGATAAAAGAGGTGCAGCTATCCAAGCATGGCAGCAGGCAGAAACTACAGTGATCAACCAATGCAACCAACTTCTTTCCCCATCAGCTGATCCGACGTATGTCATGACCTACATCAGTCATAGTTTTCCGCAGCATAAACAATATCTATGTGCTGGTGCATGGATACTTATGCAAGGGCACCCTGAAACTATTAACTGCACAACCTTGGCACGGGTATTGAGAGAATTTTCACCGGAAGAAGTAACAGCTAATATTTACACAATGGTCGATGTGCTGCTTCATCACATTCAGATCGAACCTCAGCATGGACATTCCACACAGGATATTTTGCTTAAAGTTTGTGCCAATCTTTCATTTTTCGTATGGACTCAAGAATTACTTCCTCTAGATATTCTGCTCCTAGCTTTCATTGACCGTGATGATGATCCCAATGCTCTACGCATAGTGATTGGTGTTGAATATGGTTCTTATCTTACTTAG

Protein sequence

MALLFNFNHKAKCYGGRCLDINTIGLGSQPSLHLNEFETNEWANLSHPLSSITLRDRLQSRMPYCHLLPSWCVMCSSYVEKLVPLLLDIGPLLLMHLVGDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMVMREVSPLPMSLLSGFSMNLCSKLTFQMEESLFSGQFFSGKMGMEAKDDSSDSKNSQGQTPKSYCEVVKSNRNKVVAKFMKLSMMLFKKELIIISFRLDKAFLKCLDADFARIVAQNKGWIVVPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFTLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRGIADADHLLYLQTVLEQTMATSQHTWSEKTLRYFPPILREALIGRIDKRGAAIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILMQGHPETINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLAFIDRDDDPNALRIVIGVEYGSYLT

Homology

[Close]

BLAST of Spg008684 vs. NCBI nr
Match: KAG6579266.1 (Mediator of RNA polymerase II transcription subunit 23, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 804.3 bits (2076), Expect = 7.4e-229
Identity = 417/515 (80.97%), Postives = 426/515 (82.72%), Query Frame = 0


Query: 99   GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMVM 158
            GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIM+M
Sbjct: 635  GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIM 694

Query: 159  REVSPLPMSLLSGFSMNLCSKLTFQMEESLFSGQFFSGKMGMEAKDDSSDSKNSQGQTPK 218
            REVSPLPMSLLSGFSMNLCSKLT+QMEESLFSGQ                          
Sbjct: 695  REVSPLPMSLLSGFSMNLCSKLTYQMEESLFSGQ-------------------------- 754

Query: 219  SYCEVVKSNRNKVVAKFMKLSMMLFKKELIIISFRLDKAFLKCLDADFARIVAQNKGWIV 278
                                                                        
Sbjct: 755  -----------------------------------------------------------A 814

Query: 279  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRY 338
            VPSIALAETYTRLLLLAPHSLFRSHFNHLAQ+NPSLLSKPGVTLLVLEILNYRLLPLYRY
Sbjct: 815  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQKNPSLLSKPGVTLLVLEILNYRLLPLYRY 874

Query: 339  QGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFTLRDFFFVKREGKGPTEFTE 398
            +GKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIF+LRDFFFVKREGKGPTEFTE
Sbjct: 875  EGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTE 934

Query: 399  TLNRLAVVTLAILIKTRGIADADHLLYLQTVLEQTMATSQHTWSEKTLRYFPPILREALI 458
            TLNRLAVVTLAILIKTRGIADADHLLYLQT+LEQTMATSQHTWSEKTLRYFPP+LREALI
Sbjct: 935  TLNRLAVVTLAILIKTRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREALI 994

Query: 459  GRIDKRGAAIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILM 518
            GRIDKRG AIQAWQQAETTVINQCNQLLSPSADPTYV+TYISHSFPQHKQYLCAGAWILM
Sbjct: 995  GRIDKRGVAIQAWQQAETTVINQCNQLLSPSADPTYVITYISHSFPQHKQYLCAGAWILM 1054

Query: 519  QGHPETINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 578
            QGHPE INCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL
Sbjct: 1055 QGHPENINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 1064

Query: 579  SFFVWTQELLPLDILLLAFIDRDDDPNALRIVIGV 614
            SFFVWTQELLPLDILLLAFIDRDDDPNALRIVI +
Sbjct: 1115 SFFVWTQELLPLDILLLAFIDRDDDPNALRIVISL 1064

[Close]

BLAST of Spg008684 vs. NCBI nr
Match: KAG7016782.1 (Mediator of RNA polymerase II transcription subunit 23 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 804.3 bits (2076), Expect = 7.4e-229
Identity = 417/515 (80.97%), Postives = 426/515 (82.72%), Query Frame = 0


Query: 99   GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMVM 158
            GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIM+M
Sbjct: 635  GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIM 694

Query: 159  REVSPLPMSLLSGFSMNLCSKLTFQMEESLFSGQFFSGKMGMEAKDDSSDSKNSQGQTPK 218
            REVSPLPMSLLSGFSMNLCSKLT+QMEESLFSGQ                          
Sbjct: 695  REVSPLPMSLLSGFSMNLCSKLTYQMEESLFSGQ-------------------------- 754

Query: 219  SYCEVVKSNRNKVVAKFMKLSMMLFKKELIIISFRLDKAFLKCLDADFARIVAQNKGWIV 278
                                                                        
Sbjct: 755  -----------------------------------------------------------A 814

Query: 279  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRY 338
            VPSIALAETYTRLLLLAPHSLFRSHFNHLAQ+NPSLLSKPGVTLLVLEILNYRLLPLYRY
Sbjct: 815  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQKNPSLLSKPGVTLLVLEILNYRLLPLYRY 874

Query: 339  QGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFTLRDFFFVKREGKGPTEFTE 398
            +GKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIF+LRDFFFVKREGKGPTEFTE
Sbjct: 875  EGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTE 934

Query: 399  TLNRLAVVTLAILIKTRGIADADHLLYLQTVLEQTMATSQHTWSEKTLRYFPPILREALI 458
            TLNRLAVVTLAILIKTRGIADADHLLYLQT+LEQTMATSQHTWSEKTLRYFPP+LREALI
Sbjct: 935  TLNRLAVVTLAILIKTRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREALI 994

Query: 459  GRIDKRGAAIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILM 518
            GRIDKRG AIQAWQQAETTVINQCNQLLSPSADPTYV+TYISHSFPQHKQYLCAGAWILM
Sbjct: 995  GRIDKRGVAIQAWQQAETTVINQCNQLLSPSADPTYVITYISHSFPQHKQYLCAGAWILM 1054

Query: 519  QGHPETINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 578
            QGHPE INCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL
Sbjct: 1055 QGHPENINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 1064

Query: 579  SFFVWTQELLPLDILLLAFIDRDDDPNALRIVIGV 614
            SFFVWTQELLPLDILLLAFIDRDDDPNALRIVI +
Sbjct: 1115 SFFVWTQELLPLDILLLAFIDRDDDPNALRIVISL 1064

[Close]

BLAST of Spg008684 vs. NCBI nr
Match: XP_022938601.1 (mediator of RNA polymerase II transcription subunit 23 [Cucurbita moschata])

HSP 1 Score: 804.3 bits (2076), Expect = 7.4e-229
Identity = 417/515 (80.97%), Postives = 426/515 (82.72%), Query Frame = 0


Query: 99   GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMVM 158
            GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIM+M
Sbjct: 635  GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIM 694

Query: 159  REVSPLPMSLLSGFSMNLCSKLTFQMEESLFSGQFFSGKMGMEAKDDSSDSKNSQGQTPK 218
            REVSPLPMSLLSGFSMNLCSKLT+QMEESLFSGQ                          
Sbjct: 695  REVSPLPMSLLSGFSMNLCSKLTYQMEESLFSGQ-------------------------- 754

Query: 219  SYCEVVKSNRNKVVAKFMKLSMMLFKKELIIISFRLDKAFLKCLDADFARIVAQNKGWIV 278
                                                                        
Sbjct: 755  -----------------------------------------------------------A 814

Query: 279  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRY 338
            VPSIALAETYTRLLLLAPHSLFRSHFNHLAQ+NPSLLSKPGVTLLVLEILNYRLLPLYRY
Sbjct: 815  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQKNPSLLSKPGVTLLVLEILNYRLLPLYRY 874

Query: 339  QGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFTLRDFFFVKREGKGPTEFTE 398
            +GKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIF+LRDFFFVKREGKGPTEFTE
Sbjct: 875  EGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTE 934

Query: 399  TLNRLAVVTLAILIKTRGIADADHLLYLQTVLEQTMATSQHTWSEKTLRYFPPILREALI 458
            TLNRLAVVTLAILIKTRGIADADHLLYLQT+LEQTMATSQHTWSEKTLRYFPP+LREALI
Sbjct: 935  TLNRLAVVTLAILIKTRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREALI 994

Query: 459  GRIDKRGAAIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILM 518
            GRIDKRG AIQAWQQAETTVINQCNQLLSPSADPTYV+TYISHSFPQHKQYLCAGAWILM
Sbjct: 995  GRIDKRGVAIQAWQQAETTVINQCNQLLSPSADPTYVITYISHSFPQHKQYLCAGAWILM 1054

Query: 519  QGHPETINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 578
            QGHPE INCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL
Sbjct: 1055 QGHPENINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 1064

Query: 579  SFFVWTQELLPLDILLLAFIDRDDDPNALRIVIGV 614
            SFFVWTQELLPLDILLLAFIDRDDDPNALRIVI +
Sbjct: 1115 SFFVWTQELLPLDILLLAFIDRDDDPNALRIVISL 1064

[Close]

BLAST of Spg008684 vs. NCBI nr
Match: XP_023551559.1 (mediator of RNA polymerase II transcription subunit 23 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 804.3 bits (2076), Expect = 7.4e-229
Identity = 417/515 (80.97%), Postives = 426/515 (82.72%), Query Frame = 0


Query: 99   GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMVM 158
            GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIM+M
Sbjct: 635  GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIM 694

Query: 159  REVSPLPMSLLSGFSMNLCSKLTFQMEESLFSGQFFSGKMGMEAKDDSSDSKNSQGQTPK 218
            REVSPLPMSLLSGFSMNLCSKLT+QMEESLFSGQ                          
Sbjct: 695  REVSPLPMSLLSGFSMNLCSKLTYQMEESLFSGQ-------------------------- 754

Query: 219  SYCEVVKSNRNKVVAKFMKLSMMLFKKELIIISFRLDKAFLKCLDADFARIVAQNKGWIV 278
                                                                        
Sbjct: 755  -----------------------------------------------------------A 814

Query: 279  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRY 338
            VPSIALAETYTRLLLLAPHSLFRSHFNHLAQ+NPSLLSKPGVTLLVLEILNYRLLPLYRY
Sbjct: 815  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQKNPSLLSKPGVTLLVLEILNYRLLPLYRY 874

Query: 339  QGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFTLRDFFFVKREGKGPTEFTE 398
            +GKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIF+LRDFFFVKREGKGPTEFTE
Sbjct: 875  EGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTE 934

Query: 399  TLNRLAVVTLAILIKTRGIADADHLLYLQTVLEQTMATSQHTWSEKTLRYFPPILREALI 458
            TLNRLAVVTLAILIKTRGIADADHLLYLQT+LEQTMATSQHTWSEKTLRYFPP+LREALI
Sbjct: 935  TLNRLAVVTLAILIKTRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREALI 994

Query: 459  GRIDKRGAAIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILM 518
            GRIDKRG AIQAWQQAETTVINQCNQLLSPSADPTYV+TYISHSFPQHKQYLCAGAWILM
Sbjct: 995  GRIDKRGVAIQAWQQAETTVINQCNQLLSPSADPTYVITYISHSFPQHKQYLCAGAWILM 1054

Query: 519  QGHPETINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 578
            QGHPE INCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL
Sbjct: 1055 QGHPENINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 1064

Query: 579  SFFVWTQELLPLDILLLAFIDRDDDPNALRIVIGV 614
            SFFVWTQELLPLDILLLAFIDRDDDPNALRIVI +
Sbjct: 1115 SFFVWTQELLPLDILLLAFIDRDDDPNALRIVISL 1064

[Close]

BLAST of Spg008684 vs. NCBI nr
Match: XP_022973546.1 (mediator of RNA polymerase II transcription subunit 23 [Cucurbita maxima])

HSP 1 Score: 803.1 bits (2073), Expect = 1.7e-228
Identity = 416/515 (80.78%), Postives = 426/515 (82.72%), Query Frame = 0


Query: 99   GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMVM 158
            GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIM+M
Sbjct: 635  GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIM 694

Query: 159  REVSPLPMSLLSGFSMNLCSKLTFQMEESLFSGQFFSGKMGMEAKDDSSDSKNSQGQTPK 218
            REVSPLPMSLLSGFSMNLCSKLT+QMEESLFSGQ                          
Sbjct: 695  REVSPLPMSLLSGFSMNLCSKLTYQMEESLFSGQ-------------------------- 754

Query: 219  SYCEVVKSNRNKVVAKFMKLSMMLFKKELIIISFRLDKAFLKCLDADFARIVAQNKGWIV 278
                                                                        
Sbjct: 755  -----------------------------------------------------------A 814

Query: 279  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRY 338
            VPSIALAETYTRLLLLAPHSLFRSHFNHLAQ+NPSLLSKPGVTLLVLEILNYRLLPLYRY
Sbjct: 815  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQKNPSLLSKPGVTLLVLEILNYRLLPLYRY 874

Query: 339  QGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFTLRDFFFVKREGKGPTEFTE 398
            +GKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIF+LRDFFFVKREGKGPTEFTE
Sbjct: 875  EGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTE 934

Query: 399  TLNRLAVVTLAILIKTRGIADADHLLYLQTVLEQTMATSQHTWSEKTLRYFPPILREALI 458
            TLNRLAVVTLAILIKTRGIADADHLLYLQT+LEQTMATSQHTWSEKTLRYFPP+LREALI
Sbjct: 935  TLNRLAVVTLAILIKTRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREALI 994

Query: 459  GRIDKRGAAIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILM 518
            GRIDKRG AIQAWQQAETTVINQCNQLL+PSADPTYV+TYISHSFPQHKQYLCAGAWILM
Sbjct: 995  GRIDKRGVAIQAWQQAETTVINQCNQLLAPSADPTYVITYISHSFPQHKQYLCAGAWILM 1054

Query: 519  QGHPETINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 578
            QGHPE INCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL
Sbjct: 1055 QGHPENINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 1064

Query: 579  SFFVWTQELLPLDILLLAFIDRDDDPNALRIVIGV 614
            SFFVWTQELLPLDILLLAFIDRDDDPNALRIVI +
Sbjct: 1115 SFFVWTQELLPLDILLLAFIDRDDDPNALRIVISL 1064

[Close]

BLAST of Spg008684 vs. ExPASy Swiss-Prot
Match: F4I4P3 (Mediator of RNA polymerase II transcription subunit 23 OS=Arabidopsis thaliana OX=3702 GN=MED23 PE=1 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 7.6e-184
Identity = 335/515 (65.05%), Postives = 378/515 (73.40%), Query Frame = 0


Query: 99   GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMVM 158
            G+RMMDYMNMDDRSIGMFWVVSYTMAQPACETV+NWLSSAG+ EL     LQ N+R+M+ 
Sbjct: 636  GERMMDYMNMDDRSIGMFWVVSYTMAQPACETVINWLSSAGMAEL---PGLQPNDRVMMT 695

Query: 159  REVSPLPMSLLSGFSMNLCSKLTFQMEESLFSGQFFSGKMGMEAKDDSSDSKNSQGQTPK 218
            +EV+PLPMSLLSGFSMNLC KL  QMEE+LF  Q                          
Sbjct: 696  QEVTPLPMSLLSGFSMNLCLKLALQMEEALFVSQ-------------------------- 755

Query: 219  SYCEVVKSNRNKVVAKFMKLSMMLFKKELIIISFRLDKAFLKCLDADFARIVAQNKGWIV 278
                                                                       V
Sbjct: 756  -----------------------------------------------------------V 815

Query: 279  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRY 338
            VPSIA+ ETYTRLLL++PHS+FRSHF+ LAQRN SLLSKPGVTLLVLEILNYRLLPLYRY
Sbjct: 816  VPSIAMVETYTRLLLISPHSMFRSHFSQLAQRNASLLSKPGVTLLVLEILNYRLLPLYRY 875

Query: 339  QGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFTLRDFFFVKREGKGPTEFTE 398
            QGKSK LMYDVTKIISALKGKRGDHR+FRLAENLCMNLI +LRDFF VKREGKGPTEFTE
Sbjct: 876  QGKSKTLMYDVTKIISALKGKRGDHRIFRLAENLCMNLILSLRDFFSVKREGKGPTEFTE 935

Query: 399  TLNRLAVVTLAILIKTRGIADADHLLYLQTVLEQTMATSQHTWSEKTLRYFPPILREALI 458
            TLNR+ ++TLAI IKTRGIAD DH++YLQT+LEQ +ATSQHTWSEKT+R+FP +LRE L 
Sbjct: 936  TLNRITIMTLAITIKTRGIADPDHMVYLQTMLEQILATSQHTWSEKTMRHFPSLLRETLK 995

Query: 459  GRIDKRGAAIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILM 518
            GR+DKRG +IQAWQQAETTVINQC QLLSPSA+P YV TY+SHSFPQH+QYLCAGA +LM
Sbjct: 996  GRVDKRGLSIQAWQQAETTVINQCTQLLSPSAEPAYVSTYLSHSFPQHRQYLCAGACLLM 1055

Query: 519  QGHPETINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 578
            QGH E IN T LARVLRE SPEEVTANIYT+VDVLLHH+ ++ Q G S + +L K  ANL
Sbjct: 1056 QGHAENINSTNLARVLREVSPEEVTANIYTLVDVLLHHVHVDLQQGQSLEAVLDKAGANL 1062

Query: 579  SFFVWTQELLPLDILLLAFIDRDDDPNALRIVIGV 614
            +FF WT E+LPLDI LLA IDRDDDP+AL I + +
Sbjct: 1116 AFFFWTHEMLPLDIFLLALIDRDDDPHALIIAMSL 1062

[Close]

BLAST of Spg008684 vs. ExPASy Swiss-Prot
Match: Q16HH9 (Mediator of RNA polymerase II transcription subunit 23 OS=Aedes aegypti OX=7159 GN=MED23 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 3.7e-05
Identity = 80/354 (22.60%), Postives = 140/354 (39.55%), Query Frame = 0


Query: 283 ALAETYTRLLLLAP-HSLFRSHFNHLAQRNPSLLSKP--GVTLLVLEILNYR---LLPLY 342
           AL ETY+RLL+     SL    F  L Q  P +      G+   +LE+ +YR   + P Y
Sbjct: 577 ALVETYSRLLVYTEIESLGIKGF--LGQLLPQVFKSAAWGILYTLLEMFSYRMHHIQPHY 636

Query: 343 RYQGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFTL----------RDFFFV 402
           R Q     L+  +  + S         ++    E+  + LI  L          R     
Sbjct: 637 RVQ-----LLSHLHSLASV--PHTNQMQLHSCVESTALRLITGLGSVEVQAQMSRYVTEQ 696

Query: 403 KREGKGPTEFTETLNRLAVVTLAILIKTRGIA-DADHLLYLQTVLEQTMATSQHTWSEKT 462
           K  G   +  +E LNR  ++TLA  ++  G   D     + + +L   M  + HTWS+ T
Sbjct: 697 KAPGNIVSAESEELNRALILTLARSMQITGTGNDPQSTTWCKELLNSIMQNTPHTWSQHT 756

Query: 463 LRYFPPILREALIGRIDKRGAAIQAWQQAETTVINQCNQLLSPSADPTY-VMTYISHSFP 522
           L+ FPP+L + ++                +  V  +  QLL  S D  Y   T +S+   
Sbjct: 757 LQCFPPVLNDLVV----------------QHNVPKENKQLLKKSVDEEYRNWTSMSNEND 816

Query: 523 QHKQYLCAGA--------WILMQGHPETINCTTLA-RVLREFSPEEVTANIYTMVDVLLH 582
               +  AG          +L +   ET   + +A ++L       ++A++  + D L+ 
Sbjct: 817 IIGHFGTAGTPGTPPLFLCLLFKMIVETDTISPVAYKILERIGARALSAHLRKLCDYLVF 876

Query: 583 HIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLAFIDRDDDPNALRI 610
            +       H     + K    ++  +W   ++ +D L+L    R  + N  ++
Sbjct: 877 EVSNSGDGAH-----VNKCVDTINDMIWKYNIITIDRLVLCLSLRTLEGNEAQV 900

[Close]

BLAST of Spg008684 vs. ExPASy TrEMBL
Match: A0A6J1FDL6 (mediator of RNA polymerase II transcription subunit 23 OS=Cucurbita moschata OX=3662 GN=LOC111444785 PE=3 SV=1)

HSP 1 Score: 804.3 bits (2076), Expect = 3.6e-229
Identity = 417/515 (80.97%), Postives = 426/515 (82.72%), Query Frame = 0


Query: 99   GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMVM 158
            GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIM+M
Sbjct: 635  GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIM 694

Query: 159  REVSPLPMSLLSGFSMNLCSKLTFQMEESLFSGQFFSGKMGMEAKDDSSDSKNSQGQTPK 218
            REVSPLPMSLLSGFSMNLCSKLT+QMEESLFSGQ                          
Sbjct: 695  REVSPLPMSLLSGFSMNLCSKLTYQMEESLFSGQ-------------------------- 754

Query: 219  SYCEVVKSNRNKVVAKFMKLSMMLFKKELIIISFRLDKAFLKCLDADFARIVAQNKGWIV 278
                                                                        
Sbjct: 755  -----------------------------------------------------------A 814

Query: 279  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRY 338
            VPSIALAETYTRLLLLAPHSLFRSHFNHLAQ+NPSLLSKPGVTLLVLEILNYRLLPLYRY
Sbjct: 815  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQKNPSLLSKPGVTLLVLEILNYRLLPLYRY 874

Query: 339  QGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFTLRDFFFVKREGKGPTEFTE 398
            +GKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIF+LRDFFFVKREGKGPTEFTE
Sbjct: 875  EGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTE 934

Query: 399  TLNRLAVVTLAILIKTRGIADADHLLYLQTVLEQTMATSQHTWSEKTLRYFPPILREALI 458
            TLNRLAVVTLAILIKTRGIADADHLLYLQT+LEQTMATSQHTWSEKTLRYFPP+LREALI
Sbjct: 935  TLNRLAVVTLAILIKTRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREALI 994

Query: 459  GRIDKRGAAIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILM 518
            GRIDKRG AIQAWQQAETTVINQCNQLLSPSADPTYV+TYISHSFPQHKQYLCAGAWILM
Sbjct: 995  GRIDKRGVAIQAWQQAETTVINQCNQLLSPSADPTYVITYISHSFPQHKQYLCAGAWILM 1054

Query: 519  QGHPETINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 578
            QGHPE INCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL
Sbjct: 1055 QGHPENINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 1064

Query: 579  SFFVWTQELLPLDILLLAFIDRDDDPNALRIVIGV 614
            SFFVWTQELLPLDILLLAFIDRDDDPNALRIVI +
Sbjct: 1115 SFFVWTQELLPLDILLLAFIDRDDDPNALRIVISL 1064

[Close]

BLAST of Spg008684 vs. ExPASy TrEMBL
Match: A0A6J1I8Y2 (mediator of RNA polymerase II transcription subunit 23 OS=Cucurbita maxima OX=3661 GN=LOC111472080 PE=3 SV=1)

HSP 1 Score: 803.1 bits (2073), Expect = 8.0e-229
Identity = 416/515 (80.78%), Postives = 426/515 (82.72%), Query Frame = 0


Query: 99   GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMVM 158
            GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIM+M
Sbjct: 635  GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMIM 694

Query: 159  REVSPLPMSLLSGFSMNLCSKLTFQMEESLFSGQFFSGKMGMEAKDDSSDSKNSQGQTPK 218
            REVSPLPMSLLSGFSMNLCSKLT+QMEESLFSGQ                          
Sbjct: 695  REVSPLPMSLLSGFSMNLCSKLTYQMEESLFSGQ-------------------------- 754

Query: 219  SYCEVVKSNRNKVVAKFMKLSMMLFKKELIIISFRLDKAFLKCLDADFARIVAQNKGWIV 278
                                                                        
Sbjct: 755  -----------------------------------------------------------A 814

Query: 279  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRY 338
            VPSIALAETYTRLLLLAPHSLFRSHFNHLAQ+NPSLLSKPGVTLLVLEILNYRLLPLYRY
Sbjct: 815  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQKNPSLLSKPGVTLLVLEILNYRLLPLYRY 874

Query: 339  QGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFTLRDFFFVKREGKGPTEFTE 398
            +GKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIF+LRDFFFVKREGKGPTEFTE
Sbjct: 875  EGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTE 934

Query: 399  TLNRLAVVTLAILIKTRGIADADHLLYLQTVLEQTMATSQHTWSEKTLRYFPPILREALI 458
            TLNRLAVVTLAILIKTRGIADADHLLYLQT+LEQTMATSQHTWSEKTLRYFPP+LREALI
Sbjct: 935  TLNRLAVVTLAILIKTRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREALI 994

Query: 459  GRIDKRGAAIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILM 518
            GRIDKRG AIQAWQQAETTVINQCNQLL+PSADPTYV+TYISHSFPQHKQYLCAGAWILM
Sbjct: 995  GRIDKRGVAIQAWQQAETTVINQCNQLLAPSADPTYVITYISHSFPQHKQYLCAGAWILM 1054

Query: 519  QGHPETINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 578
            QGHPE INCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL
Sbjct: 1055 QGHPENINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 1064

Query: 579  SFFVWTQELLPLDILLLAFIDRDDDPNALRIVIGV 614
            SFFVWTQELLPLDILLLAFIDRDDDPNALRIVI +
Sbjct: 1115 SFFVWTQELLPLDILLLAFIDRDDDPNALRIVISL 1064

[Close]

BLAST of Spg008684 vs. ExPASy TrEMBL
Match: A0A5A7TSF1 (Mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00510 PE=3 SV=1)

HSP 1 Score: 798.9 bits (2062), Expect = 1.5e-227
Identity = 414/515 (80.39%), Postives = 424/515 (82.33%), Query Frame = 0


Query: 99   GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMVM 158
            GDRM+DYMNMDD+SIGMFWVVSYTMAQPACETVMNWL+SAG PELSSAQNLQTNERIMVM
Sbjct: 634  GDRMVDYMNMDDKSIGMFWVVSYTMAQPACETVMNWLTSAGAPELSSAQNLQTNERIMVM 693

Query: 159  REVSPLPMSLLSGFSMNLCSKLTFQMEESLFSGQFFSGKMGMEAKDDSSDSKNSQGQTPK 218
            REVSPLPMSLLSGFSMNLCSKL +QMEESLFSGQ                          
Sbjct: 694  REVSPLPMSLLSGFSMNLCSKLAYQMEESLFSGQ-------------------------- 753

Query: 219  SYCEVVKSNRNKVVAKFMKLSMMLFKKELIIISFRLDKAFLKCLDADFARIVAQNKGWIV 278
                                                                        
Sbjct: 754  -----------------------------------------------------------A 813

Query: 279  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRY 338
            VPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLS+PGVTLLVLEILNYRLLPLYRY
Sbjct: 814  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSRPGVTLLVLEILNYRLLPLYRY 873

Query: 339  QGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFTLRDFFFVKREGKGPTEFTE 398
            QGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIF+LRDFFFVKREGKGPTEFTE
Sbjct: 874  QGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTE 933

Query: 399  TLNRLAVVTLAILIKTRGIADADHLLYLQTVLEQTMATSQHTWSEKTLRYFPPILREALI 458
            TLNRLAVVTLAILIKTRGIADADHLLYLQT+LEQTMATSQHTWSEKTLRYFPP+LRE LI
Sbjct: 934  TLNRLAVVTLAILIKTRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLI 993

Query: 459  GRIDKRGAAIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILM 518
            GRIDKRG AIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILM
Sbjct: 994  GRIDKRGVAIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILM 1053

Query: 519  QGHPETINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 578
            QGHPE+INCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL
Sbjct: 1054 QGHPESINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 1063

Query: 579  SFFVWTQELLPLDILLLAFIDRDDDPNALRIVIGV 614
            SFFVWTQELLPLDILLLAFIDRDDDPNALRIVI +
Sbjct: 1114 SFFVWTQELLPLDILLLAFIDRDDDPNALRIVISL 1063

[Close]

BLAST of Spg008684 vs. ExPASy TrEMBL
Match: A0A1S4DS63 (mediator of RNA polymerase II transcription subunit 23 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504544 PE=3 SV=1)

HSP 1 Score: 798.9 bits (2062), Expect = 1.5e-227
Identity = 414/515 (80.39%), Postives = 424/515 (82.33%), Query Frame = 0


Query: 99   GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMVM 158
            GDRM+DYMNMDD+SIGMFWVVSYTMAQPACETVMNWL+SAG PELSSAQNLQTNERIMVM
Sbjct: 589  GDRMVDYMNMDDKSIGMFWVVSYTMAQPACETVMNWLTSAGAPELSSAQNLQTNERIMVM 648

Query: 159  REVSPLPMSLLSGFSMNLCSKLTFQMEESLFSGQFFSGKMGMEAKDDSSDSKNSQGQTPK 218
            REVSPLPMSLLSGFSMNLCSKL +QMEESLFSGQ                          
Sbjct: 649  REVSPLPMSLLSGFSMNLCSKLAYQMEESLFSGQ-------------------------- 708

Query: 219  SYCEVVKSNRNKVVAKFMKLSMMLFKKELIIISFRLDKAFLKCLDADFARIVAQNKGWIV 278
                                                                        
Sbjct: 709  -----------------------------------------------------------A 768

Query: 279  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRY 338
            VPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLS+PGVTLLVLEILNYRLLPLYRY
Sbjct: 769  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSRPGVTLLVLEILNYRLLPLYRY 828

Query: 339  QGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFTLRDFFFVKREGKGPTEFTE 398
            QGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIF+LRDFFFVKREGKGPTEFTE
Sbjct: 829  QGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTE 888

Query: 399  TLNRLAVVTLAILIKTRGIADADHLLYLQTVLEQTMATSQHTWSEKTLRYFPPILREALI 458
            TLNRLAVVTLAILIKTRGIADADHLLYLQT+LEQTMATSQHTWSEKTLRYFPP+LRE LI
Sbjct: 889  TLNRLAVVTLAILIKTRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLI 948

Query: 459  GRIDKRGAAIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILM 518
            GRIDKRG AIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILM
Sbjct: 949  GRIDKRGVAIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILM 1008

Query: 519  QGHPETINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 578
            QGHPE+INCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL
Sbjct: 1009 QGHPESINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 1018

Query: 579  SFFVWTQELLPLDILLLAFIDRDDDPNALRIVIGV 614
            SFFVWTQELLPLDILLLAFIDRDDDPNALRIVI +
Sbjct: 1069 SFFVWTQELLPLDILLLAFIDRDDDPNALRIVISL 1018

[Close]

BLAST of Spg008684 vs. ExPASy TrEMBL
Match: A0A1S3CSR7 (mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504544 PE=3 SV=1)

HSP 1 Score: 798.9 bits (2062), Expect = 1.5e-227
Identity = 414/515 (80.39%), Postives = 424/515 (82.33%), Query Frame = 0


Query: 99   GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMVM 158
            GDRM+DYMNMDD+SIGMFWVVSYTMAQPACETVMNWL+SAG PELSSAQNLQTNERIMVM
Sbjct: 634  GDRMVDYMNMDDKSIGMFWVVSYTMAQPACETVMNWLTSAGAPELSSAQNLQTNERIMVM 693

Query: 159  REVSPLPMSLLSGFSMNLCSKLTFQMEESLFSGQFFSGKMGMEAKDDSSDSKNSQGQTPK 218
            REVSPLPMSLLSGFSMNLCSKL +QMEESLFSGQ                          
Sbjct: 694  REVSPLPMSLLSGFSMNLCSKLAYQMEESLFSGQ-------------------------- 753

Query: 219  SYCEVVKSNRNKVVAKFMKLSMMLFKKELIIISFRLDKAFLKCLDADFARIVAQNKGWIV 278
                                                                        
Sbjct: 754  -----------------------------------------------------------A 813

Query: 279  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRY 338
            VPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLS+PGVTLLVLEILNYRLLPLYRY
Sbjct: 814  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSRPGVTLLVLEILNYRLLPLYRY 873

Query: 339  QGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFTLRDFFFVKREGKGPTEFTE 398
            QGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIF+LRDFFFVKREGKGPTEFTE
Sbjct: 874  QGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTE 933

Query: 399  TLNRLAVVTLAILIKTRGIADADHLLYLQTVLEQTMATSQHTWSEKTLRYFPPILREALI 458
            TLNRLAVVTLAILIKTRGIADADHLLYLQT+LEQTMATSQHTWSEKTLRYFPP+LRE LI
Sbjct: 934  TLNRLAVVTLAILIKTRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLI 993

Query: 459  GRIDKRGAAIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILM 518
            GRIDKRG AIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILM
Sbjct: 994  GRIDKRGVAIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILM 1053

Query: 519  QGHPETINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 578
            QGHPE+INCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL
Sbjct: 1054 QGHPESINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 1063

Query: 579  SFFVWTQELLPLDILLLAFIDRDDDPNALRIVIGV 614
            SFFVWTQELLPLDILLLAFIDRDDDPNALRIVI +
Sbjct: 1114 SFFVWTQELLPLDILLLAFIDRDDDPNALRIVISL 1063

[Close]

BLAST of Spg008684 vs. TAIR 10
Match: AT1G23230.1 (CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 645.2 bits (1663), Expect = 5.4e-185
Identity = 335/515 (65.05%), Postives = 378/515 (73.40%), Query Frame = 0


Query: 99   GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMVM 158
            G+RMMDYMNMDDRSIGMFWVVSYTMAQPACETV+NWLSSAG+ EL     LQ N+R+M+ 
Sbjct: 636  GERMMDYMNMDDRSIGMFWVVSYTMAQPACETVINWLSSAGMAEL---PGLQPNDRVMMT 695

Query: 159  REVSPLPMSLLSGFSMNLCSKLTFQMEESLFSGQFFSGKMGMEAKDDSSDSKNSQGQTPK 218
            +EV+PLPMSLLSGFSMNLC KL  QMEE+LF  Q                          
Sbjct: 696  QEVTPLPMSLLSGFSMNLCLKLALQMEEALFVSQ-------------------------- 755

Query: 219  SYCEVVKSNRNKVVAKFMKLSMMLFKKELIIISFRLDKAFLKCLDADFARIVAQNKGWIV 278
                                                                       V
Sbjct: 756  -----------------------------------------------------------V 815

Query: 279  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRY 338
            VPSIA+ ETYTRLLL++PHS+FRSHF+ LAQRN SLLSKPGVTLLVLEILNYRLLPLYRY
Sbjct: 816  VPSIAMVETYTRLLLISPHSMFRSHFSQLAQRNASLLSKPGVTLLVLEILNYRLLPLYRY 875

Query: 339  QGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFTLRDFFFVKREGKGPTEFTE 398
            QGKSK LMYDVTKIISALKGKRGDHR+FRLAENLCMNLI +LRDFF VKREGKGPTEFTE
Sbjct: 876  QGKSKTLMYDVTKIISALKGKRGDHRIFRLAENLCMNLILSLRDFFSVKREGKGPTEFTE 935

Query: 399  TLNRLAVVTLAILIKTRGIADADHLLYLQTVLEQTMATSQHTWSEKTLRYFPPILREALI 458
            TLNR+ ++TLAI IKTRGIAD DH++YLQT+LEQ +ATSQHTWSEKT+R+FP +LRE L 
Sbjct: 936  TLNRITIMTLAITIKTRGIADPDHMVYLQTMLEQILATSQHTWSEKTMRHFPSLLRETLK 995

Query: 459  GRIDKRGAAIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILM 518
            GR+DKRG +IQAWQQAETTVINQC QLLSPSA+P YV TY+SHSFPQH+QYLCAGA +LM
Sbjct: 996  GRVDKRGLSIQAWQQAETTVINQCTQLLSPSAEPAYVSTYLSHSFPQHRQYLCAGACLLM 1055

Query: 519  QGHPETINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 578
            QGH E IN T LARVLRE SPEEVTANIYT+VDVLLHH+ ++ Q G S + +L K  ANL
Sbjct: 1056 QGHAENINSTNLARVLREVSPEEVTANIYTLVDVLLHHVHVDLQQGQSLEAVLDKAGANL 1062

Query: 579  SFFVWTQELLPLDILLLAFIDRDDDPNALRIVIGV 614
            +FF WT E+LPLDI LLA IDRDDDP+AL I + +
Sbjct: 1116 AFFFWTHEMLPLDIFLLALIDRDDDPHALIIAMSL 1062

[Close]

BLAST of Spg008684 vs. TAIR 10
Match: AT1G23230.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629). )

HSP 1 Score: 634.4 bits (1635), Expect = 9.5e-182
Identity = 332/515 (64.47%), Postives = 375/515 (72.82%), Query Frame = 0


Query: 99   GDRMMDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLSSAGVPELSSAQNLQTNERIMVM 158
            G+RMMDYMNMDDRSIGMFWVVSYTMAQPACETV+NWLSSAG+ EL     LQ N+R+M+ 
Sbjct: 617  GERMMDYMNMDDRSIGMFWVVSYTMAQPACETVINWLSSAGMAEL---PGLQPNDRVMMT 676

Query: 159  REVSPLPMSLLSGFSMNLCSKLTFQMEESLFSGQFFSGKMGMEAKDDSSDSKNSQGQTPK 218
            +EV+PLPMSLLSGFSMNLC KL  QMEE+LF  Q                          
Sbjct: 677  QEVTPLPMSLLSGFSMNLCLKLALQMEEALFVSQ-------------------------- 736

Query: 219  SYCEVVKSNRNKVVAKFMKLSMMLFKKELIIISFRLDKAFLKCLDADFARIVAQNKGWIV 278
                                                                       V
Sbjct: 737  -----------------------------------------------------------V 796

Query: 279  VPSIALAETYTRLLLLAPHSLFRSHFNHLAQRNPSLLSKPGVTLLVLEILNYRLLPLYRY 338
            VPSIA+ ETYTRLLL++PHS+FRSHF+    RN SLLSKPGVTLLVLEILNYRLLPLYRY
Sbjct: 797  VPSIAMVETYTRLLLISPHSMFRSHFS----RNASLLSKPGVTLLVLEILNYRLLPLYRY 856

Query: 339  QGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFTLRDFFFVKREGKGPTEFTE 398
            QGKSK LMYDVTKIISALKGKRGDHR+FRLAENLCMNLI +LRDFF VKREGKGPTEFTE
Sbjct: 857  QGKSKTLMYDVTKIISALKGKRGDHRIFRLAENLCMNLILSLRDFFSVKREGKGPTEFTE 916

Query: 399  TLNRLAVVTLAILIKTRGIADADHLLYLQTVLEQTMATSQHTWSEKTLRYFPPILREALI 458
            TLNR+ ++TLAI IKTRGIAD DH++YLQT+LEQ +ATSQHTWSEKT+R+FP +LRE L 
Sbjct: 917  TLNRITIMTLAITIKTRGIADPDHMVYLQTMLEQILATSQHTWSEKTMRHFPSLLRETLK 976

Query: 459  GRIDKRGAAIQAWQQAETTVINQCNQLLSPSADPTYVMTYISHSFPQHKQYLCAGAWILM 518
            GR+DKRG +IQAWQQAETTVINQC QLLSPSA+P YV TY+SHSFPQH+QYLCAGA +LM
Sbjct: 977  GRVDKRGLSIQAWQQAETTVINQCTQLLSPSAEPAYVSTYLSHSFPQHRQYLCAGACLLM 1036

Query: 519  QGHPETINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANL 578
            QGH E IN T LARVLRE SPEEVTANIYT+VDVLLHH+ ++ Q G S + +L K  ANL
Sbjct: 1037 QGHAENINSTNLARVLREVSPEEVTANIYTLVDVLLHHVHVDLQQGQSLEAVLDKAGANL 1039

Query: 579  SFFVWTQELLPLDILLLAFIDRDDDPNALRIVIGV 614
            +FF WT E+LPLDI LLA IDRDDDP+AL I + +
Sbjct: 1097 AFFFWTHEMLPLDIFLLALIDRDDDPHALIIAMSL 1039

The following BLAST results are available for this feature:

BLAST of Spg008684 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6579266.1	7.4e-229	80.97	Mediator of RNA polymerase II transcription subunit 23, partial [Cucurbita argyr...	[more]
KAG7016782.1	7.4e-229	80.97	Mediator of RNA polymerase II transcription subunit 23 [Cucurbita argyrosperma s...	[more]
XP_022938601.1	7.4e-229	80.97	mediator of RNA polymerase II transcription subunit 23 [Cucurbita moschata]	[more]
XP_023551559.1	7.4e-229	80.97	mediator of RNA polymerase II transcription subunit 23 [Cucurbita pepo subsp. pe...	[more]
XP_022973546.1	1.7e-228	80.78	mediator of RNA polymerase II transcription subunit 23 [Cucurbita maxima]	[more]

BLAST of Spg008684 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I4P3	7.6e-184	65.05	Mediator of RNA polymerase II transcription subunit 23 OS=Arabidopsis thaliana O...	[more]
Q16HH9	3.7e-05	22.60	Mediator of RNA polymerase II transcription subunit 23 OS=Aedes aegypti OX=7159 ...	[more]

BLAST of Spg008684 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDL6	3.6e-229	80.97	mediator of RNA polymerase II transcription subunit 23 OS=Cucurbita moschata OX=...	[more]
A0A6J1I8Y2	8.0e-229	80.78	mediator of RNA polymerase II transcription subunit 23 OS=Cucurbita maxima OX=36...	[more]
A0A5A7TSF1	1.5e-227	80.39	Mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis mel...	[more]
A0A1S4DS63	1.5e-227	80.39	mediator of RNA polymerase II transcription subunit 23 isoform X2 OS=Cucumis mel...	[more]
A0A1S3CSR7	1.5e-227	80.39	mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis mel...	[more]

BLAST of Spg008684 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23230.1	5.4e-185	65.05	CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629);...	[more]
AT1G23230.2	9.5e-182	64.47	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; ...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021629	Mediator complex, subunit Med23	PFAM	PF11573	Med23	coord: 270..607 e-value: 2.3E-15 score: 55.5
IPR021629	Mediator complex, subunit Med23	PANTHER	PTHR12691	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23	coord: 95..198
IPR021629	Mediator complex, subunit Med23	PANTHER	PTHR12691	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23	coord: 265..609
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..219
None	No IPR available	PANTHER	PTHR12691:SF11	BNAA09G30010D PROTEIN	coord: 265..609
None	No IPR available	PANTHER	PTHR12691:SF11	BNAA09G30010D PROTEIN	coord: 95..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008684.1	Spg008684.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010628	positive regulation of gene expression
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0005667	transcription regulator complex