Spg008649 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008649
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	photosystem II 22 kDa protein, chloroplastic-like
Location	scaffold10: 34878147 .. 34880964 (-)
RNA-Seq Expression	Spg008649
Synteny	Spg008649

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGAAATAAAAGGAAACGATGAATTGCCAGTGGCCATAAATGAACCAGTTGTTAAGGTTTAAGACAAAAACCAAAAAGAAAACCGTACTCCAAAACCCATTCCACCGATCCACCATCACAGAAATTAAACGACGACGTGTCACTCTAATCGCCGATCGTTAAAATCTCACACCAAATCCACACGCGCATCCCCTTCACCATACACTCCAAATCCCTCTTCTTAAAAACCCATCGAAAACACTCTGCCATTTGCTCAAGCTTTAACCAACGTAACTGATCCCCCTGCATTAAATCCAGTCTAAAGCTTGGCATTCATGGCGGCTCAAACCATGCTGCTTTCCTCCGGTGTGTGCGCCACCCCCGCCGCCGGCGTCAGGAGAGAAATCGCTTCGTTAACGCAGAGGCTCAGACCTAACGCCCAATTCGGTCGCCTGTTCTTCAATCCTCTGCCTTCGAATTCGGTTTCGTTGCCGGCGCGTGGATTTAGGACTCTTGCGGTTTTCAAATCCAGAGCGAAAGTGCCGCCGAAGAAGGTAATTGTGATGTGATCTGTGTGTTTATGAGAGATGGATTCGTTTGAGATTTCGTGGTGGTGTTGTGTTTTGTGTTCGTCTGGTTCTTGATTTGGTTTGGATTTTAGGTTGTGAAGCCGAAGCAGAAGGTTGAAGACGGCATTTTCGGGACGTCCGGTGGCATTGGTTTCACTAAGCAGAATGAACTCTTCGTCGGCCGTGTCGCCATGATCGGCTTTGCTGTGAGTTTGTTTCTCTGCTTTCTCATTTGAATTCCCTCGTTTTGACTGGTCAACAAAACGAAGAAGTTAAACTAGAAATGTATGGATCTATGTTGATTAGAAATTTAAATTATATAATTACAAAGCTATTTAATATTATCAAGCAAACATTTTACGTGACATATTTGTTAAATAAACACTAATTAATTTCATATGATAAAAAAAGATATTGTATAGCTCAGTGGTAATTATCATGTACCCTCGAACAAAAGGTTAGAAGTTTGAATCTCCAACCTCAAAATGTTGATGTACTCGAAAGAAGAAGGGGTGGTTTTATGTGTTTTCTTTTATACAACTCACCACTTTGTTTAATTTGTTTAATGGTCTATTTTTTTATATGTTATTTTGTGTAGCCATTAGTCAACATTGTCTAGTTGATTTGTCATATAGTTTTTTTTTTCTCTTGAGTTTCTGTCATATAGTTATTTCAATAAATGGTTGATGATATAAAAAATTACATTTCGAAATCTTTACTAGTTTAACCACAAAGATCAGTGGTTAGTAGTTACATGAGTTCAAATTCTACCTTTTTTTTTCTTGATCAATTACATCAAATTATTGTTCAAGTGTATACAAAATACAATTAAAATATGTAAATTTATAATTCACTCAAACAAAAACATTTCCTTTTTCCACATTGTCTTATGGAGGAGTATCTAAACAAATAAAGATAATAACTTGAACTAAATTTATGATTTACTTAAACAAAGATGGTTCTCCTCACAATTTAAGTACCTTAATCTATTGAACTATATAAAGAGAGACCGTCTCTAAACTTTTACCTTGTCTATATTTTTAGGGAAAAGAAATATGTACAAAGTCAGTTGAATTTCTTTGTATCCAACGACAAATAACTTAGATTAAAAAAAGTATGTGATTCTGTTGAGCATTCCACGTTGAGAATATAAGTGGAAAGCTTACAATTTATGAGATAAATGAGCTACTCCACTCATAGTCAATTGGTATTGAGGTGGAACCCAGGTAATCTAATATGGTATCAGAACTCATAAAATCCAAAAAGATAGATGAGTTGTCCGGTTTTGTTTTGAACCCGTTTATTCAAATTGGCCAAAATCATTATAAACCTAACTCGAACTTTGACGTGAGTCATGTGTGTAAAATTTGCAGGCGTCTTTGCTAGGAGAGGGGATAACCGGAAAGGGAATTCTAGCGCAATTGAACTTGGAAACTGGGATTCCGATTTACGAGGCGGAGCCTCTTCTTCTGTTCTTCATCTTATTCACTCTTCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGAAAATTCATCGACGATCCGGAACCGGCCACCGGACTGGAACGCGCCGTCATCCCTCCCGGCAAGAGCTTCCGATCGGCGATCGGTCTCAAAGAAGGAGGTAAATTTACAGTGCAGTACAATCGATGCCATTGTTCCTTCCAATTAAATCTCGATAAATCGAATTCATGACGGCTCTGTGTTTGTGCAGGTCCGTTGTTCGGATTCACGAAGGCAAATGAACTGTTCGTCGGAAGATTGGCGCAGCTAGGGTTTGTGTTCTCGCTGATCGGAGAAATCATTACAGGAAAGGGAGCGTTGGCGCAGTTGAACATCGAGACGGGAGTGCCGATCAATGAGATCGAGCCTCTGGTTTTGTTGAACGTCGTGTTCTTCTTCATTGCTGCTGTGAATCCTGGAACTGGTAAATTCGTCACCGATGAGGAAGATGATGAATGAACGGATCGACTCTGCTTTTATTTCTCTGTACATGAACTTAGCAAATCCGCATATTTCGCTTCAAGCTTGTGCTATTATAACGTTTTTATTTTGCTTGAGCTTCCAAAACAACGAAATTTAAGTAAACTTTGGCTAGTGAATTGTAGGAAACGTGAGTTTTTTTAATCCTCTTTCTTTCCAAAGCTTTTTTTTCCCTTAAATTTGGAACTTCAGCTTCTCGACTACATGTCAATTACTACTCAGCTTTCAATTTAGCAGTTTATTATATATTTTGAAACATGTCAGTTTATTTTAATTTTACCAAAGGG

mRNA sequence

ATGGCGGCTCAAACCATGCTGCTTTCCTCCGGTGTGTGCGCCACCCCCGCCGCCGGCGTCAGGAGAGAAATCGCTTCGTTAACGCAGAGGCTCAGACCTAACGCCCAATTCGGTCGCCTGTTCTTCAATCCTCTGCCTTCGAATTCGGTTTCGTTGCCGGCGCGTGGATTTAGGACTCTTGCGGTTTTCAAATCCAGAGCGAAAGTGCCGCCGAAGAAGGTTGTGAAGCCGAAGCAGAAGGTTGAAGACGGCATTTTCGGGACGTCCGGTGGCATTGGTTTCACTAAGCAGAATGAACTCTTCGTCGGCCGTGTCGCCATGATCGGCTTTGCTGCGTCTTTGCTAGGAGAGGGGATAACCGGAAAGGGAATTCTAGCGCAATTGAACTTGGAAACTGGGATTCCGATTTACGAGGCGGAGCCTCTTCTTCTGTTCTTCATCTTATTCACTCTTCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGAAAATTCATCGACGATCCGGAACCGGCCACCGGACTGGAACGCGCCGTCATCCCTCCCGGCAAGAGCTTCCGATCGGCGATCGGTCTCAAAGAAGGAGGTCCGTTGTTCGGATTCACGAAGGCAAATGAACTGTTCGTCGGAAGATTGGCGCAGCTAGGGTTTGTGTTCTCGCTGATCGGAGAAATCATTACAGGAAAGGGAGCGTTGGCGCAGTTGAACATCGAGACGGGAGTGCCGATCAATGAGATCGAGCCTCTGGTTTTGTTGAACGTCGTGTTCTTCTTCATTGCTGCTGTGAATCCTGGAACTGGTAAATTCGTCACCGATGAGGAAGATGATGAATGA

Coding sequence (CDS)

ATGGCGGCTCAAACCATGCTGCTTTCCTCCGGTGTGTGCGCCACCCCCGCCGCCGGCGTCAGGAGAGAAATCGCTTCGTTAACGCAGAGGCTCAGACCTAACGCCCAATTCGGTCGCCTGTTCTTCAATCCTCTGCCTTCGAATTCGGTTTCGTTGCCGGCGCGTGGATTTAGGACTCTTGCGGTTTTCAAATCCAGAGCGAAAGTGCCGCCGAAGAAGGTTGTGAAGCCGAAGCAGAAGGTTGAAGACGGCATTTTCGGGACGTCCGGTGGCATTGGTTTCACTAAGCAGAATGAACTCTTCGTCGGCCGTGTCGCCATGATCGGCTTTGCTGCGTCTTTGCTAGGAGAGGGGATAACCGGAAAGGGAATTCTAGCGCAATTGAACTTGGAAACTGGGATTCCGATTTACGAGGCGGAGCCTCTTCTTCTGTTCTTCATCTTATTCACTCTTCTCGGAGCCATCGGAGCCCTAGGAGACCGTGGAAAATTCATCGACGATCCGGAACCGGCCACCGGACTGGAACGCGCCGTCATCCCTCCCGGCAAGAGCTTCCGATCGGCGATCGGTCTCAAAGAAGGAGGTCCGTTGTTCGGATTCACGAAGGCAAATGAACTGTTCGTCGGAAGATTGGCGCAGCTAGGGTTTGTGTTCTCGCTGATCGGAGAAATCATTACAGGAAAGGGAGCGTTGGCGCAGTTGAACATCGAGACGGGAGTGCCGATCAATGAGATCGAGCCTCTGGTTTTGTTGAACGTCGTGTTCTTCTTCATTGCTGCTGTGAATCCTGGAACTGGTAAATTCGTCACCGATGAGGAAGATGATGAATGA

Protein sequence

MAAQTMLLSSGVCATPAAGVRREIASLTQRLRPNAQFGRLFFNPLPSNSVSLPARGFRTLAVFKSRAKVPPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSFRSAIGLKEGGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE

Homology

[Close]

BLAST of Spg008649 vs. NCBI nr
Match: XP_022952982.1 (photosystem II 22 kDa protein, chloroplastic-like [Cucurbita moschata] >XP_023545993.1 photosystem II 22 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG7032798.1 Photosystem II 22 kDa protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 499.6 bits (1285), Expect = 1.7e-137
Identity = 254/275 (92.36%), Postives = 266/275 (96.73%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCATPAAGVRREIASLTQRLRPNAQFGRLFFNPLPSNSVSLPARGFRTL 60
           MAAQTM+LSSGVCA+    ++REIASLTQRLRPNAQF RLFFNPLPS+SVSLPARGFRTL
Sbjct: 1   MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTL 60

Query: 61  AVFKSRAKVPPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 120
           A+FKS+AKVP KKVVKPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT
Sbjct: 61  AIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 120

Query: 121 GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP 180
           GKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP
Sbjct: 121 GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP 180

Query: 181 PGKSFRSAIGLKEGGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGV 240
           PGK  RSA+GLKEGGPLFGFTKANELFVGRLAQLGF FSLIGEIITGKGALAQLNIETGV
Sbjct: 181 PGKGLRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV 240

Query: 241 PINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
           PINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Sbjct: 241 PINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED 275

[Close]

BLAST of Spg008649 vs. NCBI nr
Match: XP_022991058.1 (photosystem II 22 kDa protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 495.0 bits (1273), Expect = 4.3e-136
Identity = 252/275 (91.64%), Postives = 265/275 (96.36%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCATPAAGVRREIASLTQRLRPNAQFGRLFFNPLPSNSVSLPARGFRTL 60
           MAAQTM+LSSGVCA+    ++REIASLT+RLRPNAQ  RLFFNPLPS+SVSLPARGFRTL
Sbjct: 1   MAAQTMVLSSGVCASHGVALKREIASLTRRLRPNAQSSRLFFNPLPSSSVSLPARGFRTL 60

Query: 61  AVFKSRAKVPPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 120
           A+FKS+AKVP KKVVKPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT
Sbjct: 61  AIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 120

Query: 121 GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP 180
           GKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP
Sbjct: 121 GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP 180

Query: 181 PGKSFRSAIGLKEGGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGV 240
           PGK  RSA+GLKEGGPLFGFTKANELFVGRLAQLGF FSLIGEIITGKGALAQLNIETGV
Sbjct: 181 PGKGLRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV 240

Query: 241 PINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
           PINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Sbjct: 241 PINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED 275

[Close]

BLAST of Spg008649 vs. NCBI nr
Match: KAG6602094.1 (Photosystem II 22 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 491.5 bits (1264), Expect = 4.7e-135
Identity = 249/270 (92.22%), Postives = 261/270 (96.67%), Query Frame = 0


Query: 6   MLLSSGVCATPAAGVRREIASLTQRLRPNAQFGRLFFNPLPSNSVSLPARGFRTLAVFKS 65
           M+LSSGVCA+    ++REIASLTQRLRPNAQF RLFFNPLPS+SVSLPARGFRTLA+FKS
Sbjct: 1   MVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTLAIFKS 60

Query: 66  RAKVPPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 125
           +AKVP KKVVKPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL
Sbjct: 61  KAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGITGKGIL 120

Query: 126 AQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKSF 185
           AQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGK  
Sbjct: 121 AQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIPPGKGL 180

Query: 186 RSAIGLKEGGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGVPINEI 245
           RSA+GLKEGGPLFGFTKANELFVGRLAQLGF FSLIGEIITGKGALAQLNIETGVPINEI
Sbjct: 181 RSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEI 240

Query: 246 EPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
           EPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Sbjct: 241 EPLVLLNVLFFFIAAVNPGTGKFVTDEEED 270

[Close]

BLAST of Spg008649 vs. NCBI nr
Match: XP_038885143.1 (photosystem II 22 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 488.0 bits (1255), Expect = 5.2e-134
Identity = 252/276 (91.30%), Postives = 259/276 (93.84%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCATPAAGVRREIASLTQRLRPNAQFGRLFFNPLPSNSVSLPARGFRTL 60
           MAAQTMLL+SGVC     GV+RE+     RLRPNAQF RLFFNPLPS+SVSLPARGF TL
Sbjct: 1   MAAQTMLLTSGVCVGHGVGVKREL-----RLRPNAQFSRLFFNPLPSHSVSLPARGFTTL 60

Query: 61  AVFKSRAKVPPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 120
           AVFKSR K PPKKV KPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGE IT
Sbjct: 61  AVFKSRTKAPPKKVSKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAIT 120

Query: 121 GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP 180
           GKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP
Sbjct: 121 GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP 180

Query: 181 PGKSFRSAIGLKEGGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGV 240
           PGK+FRSA+GLKEGGPLFGFTKANELFVGRLAQLGF FSLIGEIITGKGALAQLNIETGV
Sbjct: 181 PGKNFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV 240

Query: 241 PINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 277
           PINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Sbjct: 241 PINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 271

[Close]

BLAST of Spg008649 vs. NCBI nr
Match: XP_004150442.1 (photosystem II 22 kDa protein, chloroplastic [Cucumis sativus] >KAE8647273.1 hypothetical protein Csa_018297 [Cucumis sativus])

HSP 1 Score: 473.8 bits (1218), Expect = 1.0e-129
Identity = 248/277 (89.53%), Postives = 256/277 (92.42%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCATPAAGVRREIASLTQRLRPN-AQFGRLFFNPLPSNSVSLPARGFRT 60
           MAAQTMLL+SGVC      ++RE++     LRPN  QF RLFFNPLPS+SVSLP RGF T
Sbjct: 1   MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNYTQFTRLFFNPLPSHSVSLPPRGFTT 60

Query: 61  LAVFKSRAKVPPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120
           LAVFKSR K PPKKV KPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAAS+LGE I
Sbjct: 61  LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASILGEAI 120

Query: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180
           TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI
Sbjct: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180

Query: 181 PPGKSFRSAIGLKEGGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETG 240
           PPGKSFRSA+GLKEGGPLFGFTKANELFVGRLAQLGF FSLIGEIITGKGALAQLNIETG
Sbjct: 181 PPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240

Query: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 277
           VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Sbjct: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272

[Close]

BLAST of Spg008649 vs. ExPASy Swiss-Prot
Match: Q02060 (Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSBS PE=1 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 2.7e-109
Identity = 209/278 (75.18%), Postives = 238/278 (85.61%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCATPAAGVRRE--IASLTQRLRPNAQFGRLFFNPLPSNSVSLPARGFR 60
           MA   +L+  GV  T    ++R   +    Q+++P +    LFF+PLPS+S S  +  F+
Sbjct: 1   MAQAMLLMMPGVSTTNTIDLKRNALLKLQIQKIKPKSSTSNLFFSPLPSSS-SSSSTVFK 60

Query: 61  TLAVFKSRAKVPPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEG 120
           TLA+FKS+AK  PKKV KPK KVEDG+FGTSGGIGFTK+NELFVGRVAMIGFAASLLGEG
Sbjct: 61  TLALFKSKAKA-PKKVEKPKLKVEDGLFGTSGGIGFTKENELFVGRVAMIGFAASLLGEG 120

Query: 121 ITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAV 180
           ITGKGIL+QLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRG+F+D  EP TGLE+AV
Sbjct: 121 ITGKGILSQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGRFVD--EPTTGLEKAV 180

Query: 181 IPPGKSFRSAIGLKEGGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIET 240
           IPPGK  RSA+GLK  GPLFGFTK+NELFVGRLAQLGF FSLIGEIITGKGALAQLNIET
Sbjct: 181 IPPGKDVRSALGLKTKGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIET 240

Query: 241 GVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 277
           GVPINEIEPLVLLNVVFFFIAA+NPGTGKF+TD+E+++
Sbjct: 241 GVPINEIEPLVLLNVVFFFIAAINPGTGKFITDDEEED 274

[Close]

BLAST of Spg008649 vs. ExPASy Swiss-Prot
Match: Q9FPP4 (Photosystem II 22 kDa protein, chloroplastic OS=Solanum sogarandinum OX=52705 GN=PSBS PE=2 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 3.3e-107
Identity = 210/281 (74.73%), Postives = 231/281 (82.21%), Query Frame = 0


Query: 3   AQTMLLSSGVCATPAAGVRREIASLTQRLRPNAQFGRLFFNPLP----SNSVSLPARGF- 62
           AQTMLL++      A    R   SL +RL+P      LF   LP    S++ +  +  F 
Sbjct: 2   AQTMLLTAN-----AKVDLRSKESLVERLKPK-PLSSLFLPSLPLRFSSSTTNFSSSKFT 61

Query: 63  -RTLAVFKSRAKVPPKKVVKP--KQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL 122
             T+A+FKS+AK PPKKV  P  KQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL
Sbjct: 62  STTVALFKSKAKAPPKKVAPPKEKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL 121

Query: 123 LGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL 182
           LGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRG+FIDDP PATGL
Sbjct: 122 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGRFIDDPAPATGL 181

Query: 183 ERAVIPPGKSFRSAIGLKEGGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQL 242
           E+AVIPPGKSF+SA+GL EGGPLFGFTKANELFVGRLAQLG  FS+IGEIITGKGALAQL
Sbjct: 182 EKAVIPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQL 241

Query: 243 NIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
           N ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEE+D
Sbjct: 242 NFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276

[Close]

BLAST of Spg008649 vs. ExPASy Swiss-Prot
Match: P54773 (Photosystem II 22 kDa protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PSBS PE=3 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 4.3e-107
Identity = 210/281 (74.73%), Postives = 230/281 (81.85%), Query Frame = 0


Query: 3   AQTMLLSSGVCATPAAGVRREIASLTQRLRPNAQFGRLFFNPLP----SNSVSLPARGF- 62
           AQTMLL++      A    R   SL +RL+P      LF   LP    S+S +  +  F 
Sbjct: 2   AQTMLLTAN-----AKVDLRSKESLVERLKPK-PLSSLFLPSLPLRFSSSSTNASSSKFT 61

Query: 63  -RTLAVFKSRAKVPPKKVVKP--KQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL 122
             T+A+FKS+AK PPKKV  P  KQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL
Sbjct: 62  STTVALFKSKAKAPPKKVAPPKEKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASL 121

Query: 123 LGEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGL 182
           LGE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGALGDRGKF+DDP P TGL
Sbjct: 122 LGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALGDRGKFVDDPTPPTGL 181

Query: 183 ERAVIPPGKSFRSAIGLKEGGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQL 242
           E+AVIPPGKSF+SA+GL EGGPLFGFTKANELFVGRLAQLG  FS+IGEIITGKGALAQL
Sbjct: 182 EKAVIPPGKSFKSALGLSEGGPLFGFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQL 241

Query: 243 NIETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
           N ETGVPINEIEPL+L N+ FFF AA+NPGTGKF+TDEE+D
Sbjct: 242 NFETGVPINEIEPLLLFNIAFFFFAAINPGTGKFITDEEED 276

[Close]

BLAST of Spg008649 vs. ExPASy Swiss-Prot
Match: Q9SMB4 (Photosystem II 22 kDa protein, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PSBS PE=2 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 3.4e-104
Identity = 208/280 (74.29%), Postives = 228/280 (81.43%), Query Frame = 0


Query: 3   AQTMLLSSGVCATPAAGVRREIASLTQRLRPNAQFGRLFFNP-----LPSNSVSLPAR-G 62
           AQTMLL++      A    R   SL +RL+P       FF P      PS S S  +   
Sbjct: 2   AQTMLLTAN-----AKVDLRSKESLVERLKPKPLSS--FFLPSLPLKYPSASASASSHFT 61

Query: 63  FRTLAVFKSRAKVPPKKVV-KPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLL 122
             T+A+FKS+AK P KKVV KPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLL
Sbjct: 62  STTVALFKSKAKAPAKKVVPKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLL 121

Query: 123 GEGITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLE 182
           GE ITGKGILAQLNLETGIPIYEAEPLLLFFILF LLGAIGAL DRGKFIDDP P TGL+
Sbjct: 122 GEAITGKGILAQLNLETGIPIYEAEPLLLFFILFNLLGAIGALEDRGKFIDDPAPPTGLD 181

Query: 183 RAVIPPGKSFRSAIGLKEGGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLN 242
           +AVIPPGK F+SA+GL EGGPLF FTKANELFVGRLAQLG  FS+IGEIITGKGALAQLN
Sbjct: 182 KAVIPPGKGFKSALGLSEGGPLFEFTKANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 241

Query: 243 IETGVPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
            ETGVPINEIEPL+L N+VFFF+AA+NPGTGKFVTDEE++
Sbjct: 242 FETGVPINEIEPLLLFNIVFFFVAAINPGTGKFVTDEEEE 274

[Close]

BLAST of Spg008649 vs. ExPASy Swiss-Prot
Match: Q9XF91 (Photosystem II 22 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBS PE=2 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 6.1e-101
Identity = 202/275 (73.45%), Postives = 224/275 (81.45%), Query Frame = 0


Query: 3   AQTMLLSSGVCATPAAGVRREIASLTQRLRPNAQFGRLFFNPLPSNSVSLPAR--GFRTL 62
           AQTMLL+SGV    A    R  + L Q      +   LF +   ++ V+LP+R   F  L
Sbjct: 2   AQTMLLTSGV---TAGHFLRNKSPLAQ-----PKVHHLFLS--GNSPVALPSRRQSFVPL 61

Query: 63  AVFKSRAKVPPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 122
           A+FK + K  PKKV KPK KVEDGIFGTSGGIGFTK NELFVGRVAMIGFAASLLGE +T
Sbjct: 62  ALFKPKTKAAPKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALT 121

Query: 123 GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP 182
           GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIP
Sbjct: 122 GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDD--PPTGLEKAVIP 181

Query: 183 PGKSFRSAIGLKEGGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGV 242
           PGK+ RSA+GLKE GPLFGFTKANELFVGRLAQLG  FSLIGEIITGKGALAQLNIETG+
Sbjct: 182 PGKNVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGI 241

Query: 243 PINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
           PI +IEPLVLLNV FFF AA+NPG GKF+TD+ ++
Sbjct: 242 PIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264

[Close]

BLAST of Spg008649 vs. ExPASy TrEMBL
Match: A0A6J1GLX6 (photosystem II 22 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111455493 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 8.4e-138
Identity = 254/275 (92.36%), Postives = 266/275 (96.73%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCATPAAGVRREIASLTQRLRPNAQFGRLFFNPLPSNSVSLPARGFRTL 60
           MAAQTM+LSSGVCA+    ++REIASLTQRLRPNAQF RLFFNPLPS+SVSLPARGFRTL
Sbjct: 1   MAAQTMVLSSGVCASHGVALKREIASLTQRLRPNAQFSRLFFNPLPSSSVSLPARGFRTL 60

Query: 61  AVFKSRAKVPPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 120
           A+FKS+AKVP KKVVKPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT
Sbjct: 61  AIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 120

Query: 121 GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP 180
           GKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP
Sbjct: 121 GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP 180

Query: 181 PGKSFRSAIGLKEGGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGV 240
           PGK  RSA+GLKEGGPLFGFTKANELFVGRLAQLGF FSLIGEIITGKGALAQLNIETGV
Sbjct: 181 PGKGLRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV 240

Query: 241 PINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
           PINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Sbjct: 241 PINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED 275

[Close]

BLAST of Spg008649 vs. ExPASy TrEMBL
Match: A0A6J1JV31 (photosystem II 22 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111487764 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 2.1e-136
Identity = 252/275 (91.64%), Postives = 265/275 (96.36%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCATPAAGVRREIASLTQRLRPNAQFGRLFFNPLPSNSVSLPARGFRTL 60
           MAAQTM+LSSGVCA+    ++REIASLT+RLRPNAQ  RLFFNPLPS+SVSLPARGFRTL
Sbjct: 1   MAAQTMVLSSGVCASHGVALKREIASLTRRLRPNAQSSRLFFNPLPSSSVSLPARGFRTL 60

Query: 61  AVFKSRAKVPPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 120
           A+FKS+AKVP KKVVKPK+KVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT
Sbjct: 61  AIFKSKAKVPAKKVVKPKEKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 120

Query: 121 GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP 180
           GKGILAQLNLETG+PIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP
Sbjct: 121 GKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP 180

Query: 181 PGKSFRSAIGLKEGGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGV 240
           PGK  RSA+GLKEGGPLFGFTKANELFVGRLAQLGF FSLIGEIITGKGALAQLNIETGV
Sbjct: 181 PGKGLRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGV 240

Query: 241 PINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
           PINEIEPLVLLNV+FFFIAAVNPGTGKFVTDEE+D
Sbjct: 241 PINEIEPLVLLNVLFFFIAAVNPGTGKFVTDEEED 275

[Close]

BLAST of Spg008649 vs. ExPASy TrEMBL
Match: A0A0A0K7N4 (Photosystem II protein OS=Cucumis sativus OX=3659 GN=Csa_7G267900 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 5.0e-130
Identity = 248/277 (89.53%), Postives = 256/277 (92.42%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCATPAAGVRREIASLTQRLRPN-AQFGRLFFNPLPSNSVSLPARGFRT 60
           MAAQTMLL+SGVC      ++RE++     LRPN  QF RLFFNPLPS+SVSLP RGF T
Sbjct: 1   MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNYTQFTRLFFNPLPSHSVSLPPRGFTT 60

Query: 61  LAVFKSRAKVPPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120
           LAVFKSR K PPKKV KPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAAS+LGE I
Sbjct: 61  LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASILGEAI 120

Query: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180
           TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI
Sbjct: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180

Query: 181 PPGKSFRSAIGLKEGGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETG 240
           PPGKSFRSA+GLKEGGPLFGFTKANELFVGRLAQLGF FSLIGEIITGKGALAQLNIETG
Sbjct: 181 PPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240

Query: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 277
           VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Sbjct: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272

[Close]

BLAST of Spg008649 vs. ExPASy TrEMBL
Match: A0A5A7UZ08 (Photosystem II 22 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00970 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.4e-129
Identity = 248/277 (89.53%), Postives = 256/277 (92.42%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCATPAAGVRREIASLTQRLRP-NAQFGRLFFNPLPSNSVSLPARGFRT 60
           MAAQTMLL+SGVC      ++RE++     LRP N QF RLFFNPLP++SVSLPARGF  
Sbjct: 1   MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNNQFTRLFFNPLPNHSVSLPARGFTP 60

Query: 61  LAVFKSRAKVPPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120
           LAVFKSR K PPKKV KPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGE I
Sbjct: 61  LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAI 120

Query: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180
           TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI
Sbjct: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180

Query: 181 PPGKSFRSAIGLKEGGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETG 240
           PPGKSFRSA+GLKEGGPLFGFTKANELFVGRLAQLGF FSLIGEIITGKGALAQLNIETG
Sbjct: 181 PPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240

Query: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 277
           VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Sbjct: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272

[Close]

BLAST of Spg008649 vs. ExPASy TrEMBL
Match: A0A1S3CS23 (photosystem II 22 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504056 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.4e-129
Identity = 248/277 (89.53%), Postives = 256/277 (92.42%), Query Frame = 0


Query: 1   MAAQTMLLSSGVCATPAAGVRREIASLTQRLRP-NAQFGRLFFNPLPSNSVSLPARGFRT 60
           MAAQTMLL+SGVC      ++RE++     LRP N QF RLFFNPLP++SVSLPARGF  
Sbjct: 1   MAAQTMLLTSGVCVGHGVCLKRELS-----LRPNNNQFTRLFFNPLPNHSVSLPARGFTP 60

Query: 61  LAVFKSRAKVPPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGI 120
           LAVFKSR K PPKKV KPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGE I
Sbjct: 61  LAVFKSRTKAPPKKVEKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAI 120

Query: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180
           TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI
Sbjct: 121 TGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVI 180

Query: 181 PPGKSFRSAIGLKEGGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETG 240
           PPGKSFRSA+GLKEGGPLFGFTKANELFVGRLAQLGF FSLIGEIITGKGALAQLNIETG
Sbjct: 181 PPGKSFRSALGLKEGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETG 240

Query: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 277
           VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE
Sbjct: 241 VPINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDDE 272

[Close]

BLAST of Spg008649 vs. TAIR 10
Match: AT1G44575.1 (Chlorophyll A-B binding family protein )

HSP 1 Score: 368.6 bits (945), Expect = 4.3e-102
Identity = 202/275 (73.45%), Postives = 224/275 (81.45%), Query Frame = 0


Query: 3   AQTMLLSSGVCATPAAGVRREIASLTQRLRPNAQFGRLFFNPLPSNSVSLPAR--GFRTL 62
           AQTMLL+SGV    A    R  + L Q      +   LF +   ++ V+LP+R   F  L
Sbjct: 2   AQTMLLTSGV---TAGHFLRNKSPLAQ-----PKVHHLFLS--GNSPVALPSRRQSFVPL 61

Query: 63  AVFKSRAKVPPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 122
           A+FK + K  PKKV KPK KVEDGIFGTSGGIGFTK NELFVGRVAMIGFAASLLGE +T
Sbjct: 62  ALFKPKTKAAPKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALT 121

Query: 123 GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP 182
           GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIP
Sbjct: 122 GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDD--PPTGLEKAVIP 181

Query: 183 PGKSFRSAIGLKEGGPLFGFTKANELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGV 242
           PGK+ RSA+GLKE GPLFGFTKANELFVGRLAQLG  FSLIGEIITGKGALAQLNIETG+
Sbjct: 182 PGKNVRSALGLKEQGPLFGFTKANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGI 241

Query: 243 PINEIEPLVLLNVVFFFIAAVNPGTGKFVTDEEDD 276
           PI +IEPLVLLNV FFF AA+NPG GKF+TD+ ++
Sbjct: 242 PIQDIEPLVLLNVAFFFFAAINPGNGKFITDDGEE 264

[Close]

BLAST of Spg008649 vs. TAIR 10
Match: AT1G44575.2 (Chlorophyll A-B binding family protein )

HSP 1 Score: 235.3 bits (599), Expect = 5.7e-62
Identity = 136/195 (69.74%), Postives = 151/195 (77.44%), Query Frame = 0


Query: 3   AQTMLLSSGVCATPAAGVRREIASLTQRLRPNAQFGRLFFNPLPSNSVSLPAR--GFRTL 62
           AQTMLL+SGV    A    R  + L Q      +   LF +   ++ V+LP+R   F  L
Sbjct: 2   AQTMLLTSGV---TAGHFLRNKSPLAQ-----PKVHHLFLS--GNSPVALPSRRQSFVPL 61

Query: 63  AVFKSRAKVPPKKVVKPKQKVEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEGIT 122
           A+FK + K  PKKV KPK KVEDGIFGTSGGIGFTK NELFVGRVAMIGFAASLLGE +T
Sbjct: 62  ALFKPKTKAAPKKVEKPKSKVEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALT 121

Query: 123 GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFIDDPEPATGLERAVIP 182
           GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKF+DD  P TGLE+AVIP
Sbjct: 122 GKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGKFVDD--PPTGLEKAVIP 181

Query: 183 PGKSFRSAIGLKEGG 196
           PGK+ RSA+GLKE G
Sbjct: 182 PGKNVRSALGLKEQG 184

The following BLAST results are available for this feature:

BLAST of Spg008649 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952982.1	1.7e-137	92.36	photosystem II 22 kDa protein, chloroplastic-like [Cucurbita moschata] >XP_02354...	[more]
XP_022991058.1	4.3e-136	91.64	photosystem II 22 kDa protein, chloroplastic-like [Cucurbita maxima]	[more]
KAG6602094.1	4.7e-135	92.22	Photosystem II 22 kDa protein, chloroplastic, partial [Cucurbita argyrosperma su...	[more]
XP_038885143.1	5.2e-134	91.30	photosystem II 22 kDa protein, chloroplastic [Benincasa hispida]	[more]
XP_004150442.1	1.0e-129	89.53	photosystem II 22 kDa protein, chloroplastic [Cucumis sativus] >KAE8647273.1 hyp...	[more]

BLAST of Spg008649 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q02060	2.7e-109	75.18	Photosystem II 22 kDa protein, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSB...	[more]
Q9FPP4	3.3e-107	74.73	Photosystem II 22 kDa protein, chloroplastic OS=Solanum sogarandinum OX=52705 GN...	[more]
P54773	4.3e-107	74.73	Photosystem II 22 kDa protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=...	[more]
Q9SMB4	3.4e-104	74.29	Photosystem II 22 kDa protein, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PSB...	[more]
Q9XF91	6.1e-101	73.45	Photosystem II 22 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of Spg008649 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GLX6	8.4e-138	92.36	photosystem II 22 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JV31	2.1e-136	91.64	photosystem II 22 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A0A0K7N4	5.0e-130	89.53	Photosystem II protein OS=Cucumis sativus OX=3659 GN=Csa_7G267900 PE=4 SV=1	[more]
A0A5A7UZ08	1.4e-129	89.53	Photosystem II 22 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CS23	1.4e-129	89.53	photosystem II 22 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10350...	[more]

BLAST of Spg008649 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G44575.1	4.3e-102	73.45	Chlorophyll A-B binding family protein	[more]
AT1G44575.2	5.7e-62	69.74	Chlorophyll A-B binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 136..246 e-value: 3.5E-6 score: 29.0
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 58..135 e-value: 1.7E-5 score: 26.9
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 90..220 e-value: 4.6E-8 score: 33.8
None	No IPR available	PANTHER	PTHR14154:SF74	PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC	coord: 198..261 coord: 3..187
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 198..261 coord: 3..187
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 85..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008649.1	Spg008649.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010196	nonphotochemical quenching
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019904	protein domain specific binding