Spg008639 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAACCTCCATAGCTGAACAAGTTTACAGGCTGGAAGATCTTATAGTTCCTACTCCAGAACCTGTTAAACCAATTTTTAGCCTTCTCAAAAAGGTCAATCTCAAAACTCCCGAGACCCAATTCTTGGAAGAAATCGACAGAAAATTGTTAGCTCTCTCAAAAGGAGAAAGCTCAAAGCAAATCAATGTCCTAAACGACAGTGATTTTGAAGATGTCGATTCTCTTATAGAGCAATTCTCAGCCCTTCAAATGGAAGAACCTCAGAATATCAACAAGATAGAATATTCAAAAACTTCCGATCTAATAAATTCGTATCAAAGGCCTTCCATGGCAGATCTCAATTATGAGCAGAACAACAAGTTCCTCAGAAATAGACAATATGACGGAACATCAGTTTACGTCTGGAATATTGATGGTATGTCAGAAAGACAGATTCTTAATATGCTCTCAGAAATACTTATAGCATCAGTAGCATATCAAGAAAATGGAAATACAAACCATCAAGCTGCTTCAATGATCATCAATGGCTTTTTAGGTATCCTAAAAGGATGGTGGGATTGCCTCAATTTTGCAATGAAAACTGAAATCAAGACTCACAAAACCAGGGTTAAAGTCAAAAAAGAAGTAAAAATCGAAGAGACAAAAAAGGTTGACCCTGTAGTCAAAATTGTAGAAGCCGCAACTTCAAGTACTGCGTCTTTAGGAGTTGCTACTGCAGGAGCAGCAGCTCAAAAATCCAAAGTCGAAACTCCAAAATCAATCTTCATAGAGGAAGAAGTTGATCAACACGACGCTGTTGAGACCTTAGTCTATGCTATAGCATGGAACTTTACAACGTCTCATAGCGCCAGGTTTAACGACTCTCAAAGAACAATCCTTAAGAACCTTAGATGTTCAAATCTTGCAAATTTCAATTGGTACAAAGATATGTTCATGGCCAGAATCTTTTATGTCAAAGACATTGATAAGCAATTCTGGAAAGAAAGGTTCATTGATGGACTTCCCAGTTATGTTGTTGAACGTGTCTATATGGCTCTCCGTGAAAGGTTCAATGGAGATATCATTTGGACCGAACTTACCTACGGAGACATAATGTCTTACGTGATCAATTGTGGGTTATAAATTTGCAATGAAATCAAAGTTTAAAGGAAGGTTCAAAGAGAAGACAAAAGCCGTCTTAGAGAAATGAAGGCTTTTTGTTCTCAATATGGTTGTGAAAGAATTGAAGAGCCAAATCGCCCTTCAAGAAAAATCGTCCGAAGAAACAACAGTCGGCGATACTACAAAAACTACAACCAACAATTCATTCAAAGAAGGCCACAGAGAAATTACTCTAGGCCTCAAAGAGATTATGTTCCCAAGCAACATCATCACAAAAGAATGACCCAGAAACGTCATTCTCGCCCCAATCCTTCCAATCCTCGCAGAGACACAAGAAAAGTCTTCTGCTTCAAATGTCAAAAGGAAAGACATTATGCAAACAATTGTCCAAGTAGAAGAATCAATGAGTTAGACTTTGATGAAGAATATTCTTCAGATTTCTCAAACAGTTCTTTCGATGAAGTCAATCATCTTCAATTCGAAGATACTGATTCAGAAATCTCCAGTCAAAGTAATAGCCATCATTCAGAAGGCATCAAAGCCTATAAAAAGGACTGTGAAGGACACTGCATAAATGTTCTTACCAATGAACAAGAAGTTCTCTTCAACTCTATTGATCACATAGAGGACAAAGAGATGAAGAAAACCATTCTGAAGACATTAAAACAGTCTTTAGAATCTTCAAAATCCCCAGAGCCGCCCAGAGAAAGAAGAGAAATCCGACAACTCAGTCTTAGGGAAATTCTTGATACCAAACTAGGGTTTTCCAGATCAAAACCTGATATTCATCCTTCTTCTATTCAAGACCTTCAATTTGAAAGCAACAATCTCAAAAAGGAGATAAGAGAAAACAGAGAAGAGATTGATTTGATAAAAATAGAGATTAATAATCTCAAACTCAAATCGACCAACTCTGACAATGAAGGAGATGATTTCCTTCTCAACCAGGTCACGAAATCCCAATTTCAAAAGTGGTATTCTTTGATTACCCTCAAAATCGAAGATTTTCAAATTACTCTGAAAGCTCTTATCGATTCAGGAGCTGATCAAAATTGCATCCAGCAAGGGTTAATACCCACAAAGTACTTCGAAAAAACTACCGAAAAACTAAGTAGTGTAAATGGCCAAAGCCTCAATATTCAATTCAAACTCCCAAATGTCCATATCTGCAATAAGGACATTTGCATTGTCAGTTCTTTCCTTCTTGTCAAAGATCTAAAGCAAGAGTTGATTTTAGGAACTCCTTTCCTAACTCAACTTTACCCAATCAAAATAACCGAACAAGGTTTGGTTAGCCAATTGGATGGAACCAAAATTATCTTCGAGTTCATCGCCCCAATTCTTCCATATGATATTATGGAAGTCAGCGAATTGAAACTTGATCAGATCAAGAAAAAGCAAAAATAGATTTCGTTTTTAAAAGAAGAAATTAGTTTCAAAAAGATTAAGGAAAACCTCAAAAATCCTTCTTTAAAAATCAGAATCAAAGATTTAGAAAACAAAATTGAAAAAGAGATTTGTTCAAATCTTCCAAATGCTTTTTGGGATAGGAAGAAACACATTGTTAATCTTCCTTATTCAAAAGATTTTGATGAATCAAAAATTCCCACAAAGGCTAGACCTATTCAAATGAATTCAGATCTACTAACATTCTATAAAAAAGAAATACAGGATTTGCTCAGAAAGAAGCTGATCAGACCATCCAAAAGCCCATGGTCGTGCGTAGCATTCTATGTGAACAACGCAGCCGAACAGGAGCTTGGTGTGCCAAGGTTAGTAATAAATTACAAACCTTTAAACAAAGTTTTGGAATGGATTCGATATCCTATTCCCAATAAACAAGATTTGCTAAAATGCATTTCAAATGCAAAAGTATTTTCAAATTTTGATTTAAAATCTAGATTTTGGCAAATTCAAATATCCGAAAAGGATAAATACAAAACTTCTTTCAATGTGCCATTCGGTCAATACGAATGGAATGTTATGCCATTTGGGCTTAAAAATGCCCCTTCTGAATTTCAAAAAATCATGAATGATATTTTCAATGATTTTCAAAATTTTAGAATTGTTTATATTGACAATGTTTTGATTTTCTCTTCAAACATCGATCAACATTTCAAACACTTGAATATGTTTATCAATATTATTAAGCAAAATGGTTTGGTAGTCTCTCTACCAAAAGTCAAATTATTTCAGACCCAAATTAAATTTTTGGGCTTCGATATTCATATGGGCCTTATAAAACCCATTCAAAGGTCCATAAACTTTGCTTCAAACTTTCCAGACCAAATTACTGACAAAACCCAACTTCAAAGGTTTTTGGGCTGTCTCAATTACGTGTCTGATTTTATCCAAAACCTCAGACACATTTGCAAACCCCTTTTCCAAAGGCTTAAGAAAAATCCAAAACCATGGAAAGAAGAGCATACTAAAGCTGTACAAAAGATAAAAGCTTTAGTCAAATCAATTCCCTGTTTGAGTCTTATCAATCCTAAAGCCAATCTGACTGTGGAAACAGACGCATCAGACATTGGATATGGAGGAATCCTCAAACAGTGTATTGATAAAAAAGAATCAATTATCCATTTTCATTCTGGCATCTGGAATGACACTCAAAAGAATTACTCCACAGTCAAAAAAGAGTTACTTGCTATAGTACTCTGTGTTAAGAAATTCCAAGGTGATCTGATAAACAAAAAAATTTACCATCAAAACAGATTCAAGAGCATCAAAATTTGTTTTAGAAAAGGATGTCAAAAATCTGGTTTCGAAACAGATTTTTGCCAGATGGCAAGCAATTTTATCCTGTTTTGATTTCGAGATTTTGCCTATAAAAGGCGTTCAAAACCCCTTAGCAGATTACCTCTCAAGGGAGTTTCTAACTCCAAAACTCTCTCCTTTCTCTCTCTCTCTTTCTAAAGAAAAGAAAAGAGTTCATGAGCAGAAGTAGAGGCAGAGCCTCCTCTTCAAGGGGCAGTCGCCCATCTTCCTCTTCCTCAGCACCTCCTCCCATGAGTGCTGATCAATACGCAATGGATTTAGGGTTTACTCCGGTAACCCGATCCAGAGCTAGAACGACCGATTCTACCAACAGAGTCATCTACTCCACCTCCAAGGCCTTCGGCCAACCTCGTCCGTCCTTCCGGCGGAATTGTTCAATTGAGACCTCTTGTCTCTCCATCTTCAAGGACAGGATCATCGATCCCGTCATCTTCAACTTACTCTCAGGCAGTTACTCCTGA ATGCTAACCTCCATAGCTGAACAAGTTTACAGGCTGGAAGATCTTATAGTTCCTACTCCAGAACCTGTTAAACCAATTTTTAGCCTTCTCAAAAAGGTCAATCTCAAAACTCCCGAGACCCAATTCTTGGAAGAAATCGACAGAAAATTGTTAGCTCTCTCAAAAGGAGAAAGCTCAAAGCAAATCAATGTCCTAAACGACAGTGATTTTGAAGATGTCGATTCTCTTATAGAGCAATTCTCAGCCCTTCAAATGGAAGAACCTCAGAATATCAACAAGATAGAATATTCAAAAACTTCCGATCTAATAAATTCGTATCAAAGGCCTTCCATGGCAGATCTCAATTATGAGCAGAACAACAAGTTCCTCAGAAATAGACAATATGACGGAACATCAGTTTACGTCTGGAATATTGATGGTATGTCAGAAAGACAGATTCTTAATATGCTCTCAGAAATACTTATAGCATCAGTAGCATATCAAGAAAATGGAAATACAAACCATCAAGCTGCTTCAATGATCATCAATGGCTTTTTAGTCAATCATCTTCAATTCGAAGATACTGATTCAGAAATCTCCAGTCAAAGTAATAGCCATCATTCAGAAGGCATCAAAGCCTATAAAAAGGACTGTGAAGGACACTGCATAAATGTTCTTACCAATGAACAAGAAGTTCTCTTCAACTCTATTGATCACATAGAGGACAAAGAGATGAAGAAAACCATTCTGAAGACATTAAAACAGTCTTTAGAATCTTCAAAATCCCCAGAGCCGCCCAGAGAAAGAAGAGAAATCCGACAACTCAGTCTTAGGGAAATTCTTGATACCAAACTAGGAAGTAGAGGCAGAGCCTCCTCTTCAAGGGGCAGTCGCCCATCTTCCTCTTCCTCAGCACCTCCTCCCATGAGTGCTGATCAATACGCAATGGATTTAGGGTTTACTCCGGTAACCCGATCCAGAGCTAGAACGACCGATTCTACCAACAGAGTCATCTACTCCACCTCCAAGGCCTTCGGCCAACCTCGTCCGTCCTTCCGGCGGAATTGTTCAATTGAGACCTCTTGTCTCTCCATCTTCAAGGACAGGATCATCGATCCCGTCATCTTCAACTTACTCTCAGGCAGTTACTCCTGA ATGCTAACCTCCATAGCTGAACAAGTTTACAGGCTGGAAGATCTTATAGTTCCTACTCCAGAACCTGTTAAACCAATTTTTAGCCTTCTCAAAAAGGTCAATCTCAAAACTCCCGAGACCCAATTCTTGGAAGAAATCGACAGAAAATTGTTAGCTCTCTCAAAAGGAGAAAGCTCAAAGCAAATCAATGTCCTAAACGACAGTGATTTTGAAGATGTCGATTCTCTTATAGAGCAATTCTCAGCCCTTCAAATGGAAGAACCTCAGAATATCAACAAGATAGAATATTCAAAAACTTCCGATCTAATAAATTCGTATCAAAGGCCTTCCATGGCAGATCTCAATTATGAGCAGAACAACAAGTTCCTCAGAAATAGACAATATGACGGAACATCAGTTTACGTCTGGAATATTGATGGTATGTCAGAAAGACAGATTCTTAATATGCTCTCAGAAATACTTATAGCATCAGTAGCATATCAAGAAAATGGAAATACAAACCATCAAGCTGCTTCAATGATCATCAATGGCTTTTTAGTCAATCATCTTCAATTCGAAGATACTGATTCAGAAATCTCCAGTCAAAGTAATAGCCATCATTCAGAAGGCATCAAAGCCTATAAAAAGGACTGTGAAGGACACTGCATAAATGTTCTTACCAATGAACAAGAAGTTCTCTTCAACTCTATTGATCACATAGAGGACAAAGAGATGAAGAAAACCATTCTGAAGACATTAAAACAGTCTTTAGAATCTTCAAAATCCCCAGAGCCGCCCAGAGAAAGAAGAGAAATCCGACAACTCAGTCTTAGGGAAATTCTTGATACCAAACTAGGAAGTAGAGGCAGAGCCTCCTCTTCAAGGGGCAGTCGCCCATCTTCCTCTTCCTCAGCACCTCCTCCCATGAGTGCTGATCAATACGCAATGGATTTAGGGTTTACTCCGGTAACCCGATCCAGAGCTAGAACGACCGATTCTACCAACAGAGTCATCTACTCCACCTCCAAGGCCTTCGGCCAACCTCGTCCGTCCTTCCGGCGGAATTGTTCAATTGAGACCTCTTGTCTCTCCATCTTCAAGGACAGGATCATCGATCCCGTCATCTTCAACTTACTCTCAGGCAGTTACTCCTGA MLTSIAEQVYRLEDLIVPTPEPVKPIFSLLKKVNLKTPETQFLEEIDRKLLALSKGESSKQINVLNDSDFEDVDSLIEQFSALQMEEPQNINKIEYSKTSDLINSYQRPSMADLNYEQNNKFLRNRQYDGTSVYVWNIDGMSERQILNMLSEILIASVAYQENGNTNHQAASMIINGFLVNHLQFEDTDSEISSQSNSHHSEGIKAYKKDCEGHCINVLTNEQEVLFNSIDHIEDKEMKKTILKTLKQSLESSKSPEPPRERREIRQLSLREILDTKLGSRGRASSSRGSRPSSSSSAPPPMSADQYAMDLGFTPVTRSRARTTDSTNRVIYSTSKAFGQPRPSFRRNCSIETSCLSIFKDRIIDPVIFNLLSGSYS Homology
BLAST of Spg008639 vs. NCBI nr
Match: KAF5803680.1 (putative transcription factor interactor and regulator CCHC(Zn) family [Helianthus annuus]) HSP 1 Score: 86.7 bits (213), Expect = 4.8e-13 Identity = 51/137 (37.23%), Postives = 84/137 (61.31%), Query Frame = 0
BLAST of Spg008639 vs. NCBI nr
Match: XP_033139453.1 (uncharacterized protein LOC117131412 isoform X1 [Brassica rapa]) HSP 1 Score: 82.4 bits (202), Expect = 9.1e-12 Identity = 70/237 (29.54%), Postives = 124/237 (52.32%), Query Frame = 0
BLAST of Spg008639 vs. NCBI nr
Match: CAN68872.1 (hypothetical protein VITISV_020242 [Vitis vinifera]) HSP 1 Score: 79.3 bits (194), Expect = 7.7e-11 Identity = 57/179 (31.84%), Postives = 93/179 (51.96%), Query Frame = 0
BLAST of Spg008639 vs. NCBI nr
Match: MCI06258.1 (hypothetical protein [Trifolium medium]) HSP 1 Score: 78.6 bits (192), Expect = 1.3e-10 Identity = 46/147 (31.29%), Postives = 85/147 (57.82%), Query Frame = 0
BLAST of Spg008639 vs. NCBI nr
Match: KAG5586552.1 (hypothetical protein H5410_046986 [Solanum commersonii]) HSP 1 Score: 77.4 bits (189), Expect = 2.9e-10 Identity = 67/232 (28.88%), Postives = 112/232 (48.28%), Query Frame = 0
BLAST of Spg008639 vs. ExPASy TrEMBL
Match: A0A251VET5 (Putative reverse transcriptase domain, Zinc finger, CCHC-type, Aspartic peptidase domain protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr02g0042331 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.8e-14 Identity = 67/204 (32.84%), Postives = 110/204 (53.92%), Query Frame = 0
BLAST of Spg008639 vs. ExPASy TrEMBL
Match: A0A251TAC4 (Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr11g0333631 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 8.0e-14 Identity = 67/207 (32.37%), Postives = 111/207 (53.62%), Query Frame = 0
BLAST of Spg008639 vs. ExPASy TrEMBL
Match: A5CBG1 (CCHC-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_020242 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 3.7e-11 Identity = 57/179 (31.84%), Postives = 93/179 (51.96%), Query Frame = 0
BLAST of Spg008639 vs. ExPASy TrEMBL
Match: A0A1J3J6U2 (Movement protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=MP_TR7902_c22_g1_i1_g.23994 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 4.9e-11 Identity = 57/194 (29.38%), Postives = 99/194 (51.03%), Query Frame = 0
BLAST of Spg008639 vs. ExPASy TrEMBL
Match: A0A392P2N5 (Uncharacterized protein OS=Trifolium medium OX=97028 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 6.3e-11 Identity = 46/147 (31.29%), Postives = 85/147 (57.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|