Spg008604 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008604
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold10: 30666961 .. 30669399 (+)
RNA-Seq Expression	Spg008604
Synteny	Spg008604

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATGCGACCGCATTTCTGGAAAAACAGAGGTCGTTCCGAGTCGCACGTGGGTCGTTGTTGACAAGTCTTCTTCGCATTTAACCGGTTATTTTGACCCCGAAACTGACTGGGCAACCTTCCAGCACCTATTTCGCAGCTCGTCAACCAATTTCTACACTATATAAGCTCGAGATTCGAAGTCAAATCCAAGCAGAACTCACTTGGAAGAAAAGGGTGGTGACAGAACCCTGGCTCGATGCCAATGAGTAGGGATGCCCGAGGTCCTTCTTAGATGACCAAATTCTAACCTGAGAGAGAGTTAGACATCAAACCTTATGGTTTGTAGAGAGTTTCACCCATTCCCATCTTGTAAAAGTGAGAGAGTGGAGTGTCTTAGCGAACTCTAGAAGGATTGTGTAAACAAAAAACCCATAATATTTAGCTATCTCCTTTATTTCCAGCTTGTGATTACTTTTCATTATTCTGTATTTTTTACATTATCATTTCAATGAAAATGTGTTCATTTTCTTTTTATCCCATCATGAGTAGCTAAATCCCGTTGAGGGGTTCAATGTGGTGAATTCCCTTAGGGTTTAATGGCTTGAAAGTACTCTATTTGCTTAAGTTGTGTTTAATGCATGTCATTCTTTATTGATTATCACTCTAATCTTGCTGAGTTTAATTTGATCACTTAGACTTTGCATGCTATGTGAGTTTGATCTCGAAAGGGACAAACGATATCGATTCTCATAAAGGTGATATAGGAGAAAAAGCTCGAAAGAGATTGTTCGGCGGTATAGGGCAAGCTGCCTAAGGCACCCTATATCGACTATAGGGTTATAGGTTGCATTCGTGAATTATCTATGTCGGAGTCGAGTCCCATAAATGGGCATAACGGTACTCACTTAGCCTTCTAACGGTTTTTGGGAACAAAGACCAAATGGAAGTTAAATCTGACCCAATGCATTAAATACATTTAAGTTAGATATTTCATGAGTATGGTTGTTACCTTAGGGATGAATCCATGTTGAATACCTCGTTTTATCTTATTGTTATTCTTTATTATTTTATTGCTTGTTTTGTTATCTTTTCAAAAACTCAATCAATCAACTTATTTTCTTTGGTTACCTTTTTAAGAGCAATCATTTGAGCAGTTTCTTCATCAAATCTGAATTTCCAATTTAGTCCTTGTGGGATCGATACCCTTGGAATACTTTCTGAGGTTTTTTTATTACTACGTGCGACAGTGTATACTTGCACTTAAGTGTTGGCTGAATATTTCTTTCTTATTATTATTCATCTTATCTCACATTCCATCCATTCAGTTCACACACGCACCATGAGGAAAACCGAAAATGGGTATTCATTGAGTCAAATCAATTAATGAGGGCAAAATCTTTCGGTTATGATTTGATTTGCTGAAGCTCTATTTATTCCAAACCCTTTGGTAAGTGCTTCTCACTCTATTTTCTTGTTTCAACCTTTGTCGTGTGTATTCTTCTTTCTTTGTTTTGATTTTCTGTAAGTCCTTTAAGTCTCCAATGGCGAAAACTAGAGCAAGAAAAGAGAGGGAGAATGAGGAGGAAGAGGTGCCTGTTACCCCTGAGGTACAGAAAGTAAAAGCGAAGAAGAAGAAGACACCGGAGGAAAAAGAAGCCAAAAGAAGGAGAAGGCAACAACGGGCTGAGGAGCAAGAAGCTGTCCAGAAGGCGACAGAAGATGTTACTACTACAGTGGAAGAAGGAAATCCGAAAGAACTTGAAGTGCAGAACCCAGAGGAGGGTGAACCGATAGTGGCAGATACAGAAAGAGTTCAAGAAAAGAACACTGAGGAGATTCAAGAAAAACAGGCTGAGGAAGTGCAGGAACATCATGCAAAGGTTGCACTTGAAGAAGGTAATGAGCAAGAACAGGAGGCTCGAGTGGAGGTGATCATCTCGGAGGTACCCAAACGTCGCCGCATTAAGAGGAAAGCGGGCCGCATCAAGGTAGTCGGAACTGATACCCCCTCGCCTCCAACTACTGACTCTGAAAGAGAGAATGCAGAGAAAGAAGAGCGTGAGAAGAAGGAGGTCAAGGAAAAAGTAAGAGAAGAAGCAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAAAGTGTTGCTGAAGCATCGGAAGAACCTGATGAGATAGAAGAGCCACAGTTGCCGTATGATCGCTTCGTCAACAATTCTGCCAGAGCAAAATATGCTAAGCTGCTGAAAAGAGATTTCCTGTTTGAGAGAGGATTTAGCGGTGATCTTCCGCATTTTCTAAGGACCGGCATTGCAGACCACGGCTGGGAGTTGTTTTGTGCAAAGCCTGAGTCTGTAAACGCACAGGTGGTGCGCGAATTTTATGCAAATATTGACAAGGAAGATGGTTTCCAAGTGATTGTTCGGGGAGTCGAAGTCGACTAG

mRNA sequence

ATGAAATGCGACCGCATTTCTGGAAAAACAGAGGTCGTTCCGAGTCGCACGTGGTCTCCAATGGCGAAAACTAGAGCAAGAAAAGAGAGGGAGAATGAGGAGGAAGAGGTGCCTGTTACCCCTGAGGTACAGAAAGTAAAAGCGAAGAAGAAGAAGACACCGGAGGAAAAAGAAGCCAAAAGAAGGAGAAGGCAACAACGGGCTGAGGAGCAAGAAGCTGTCCAGAAGGCGACAGAAGATGTTACTACTACAGTGGAAGAAGGAAATCCGAAAGAACTTGAAGTGCAGAACCCAGAGGAGGGTGAACCGATAGTGGCAGATACAGAAAGAGTTCAAGAAAAGAACACTGAGGAGATTCAAGAAAAACAGGCTGAGGAAGTGCAGGAACATCATGCAAAGGTTGCACTTGAAGAAGGTAATGAGCAAGAACAGGAGGCTCGAGTGGAGGTGATCATCTCGGAGGTACCCAAACGTCGCCGCATTAAGAGGAAAGCGGGCCGCATCAAGGTAGTCGGAACTGATACCCCCTCGCCTCCAACTACTGACTCTGAAAGAGAGAATGCAGAGAAAGAAGAGCGTGAGAAGAAGGAGGTCAAGGAAAAAGTAAGAGAAGAAGCAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAAAGTGTTGCTGAAGCATCGGAAGAACCTGATGAGATAGAAGAGCCACAGTTGCCGTATGATCGCTTCGTCAACAATTCTGCCAGAGCAAAATATGCTAAGCTGCTGAAAAGAGATTTCCTGTTTGAGAGAGGATTTAGCGGTGATCTTCCGCATTTTCTAAGGACCGGCATTGCAGACCACGGCTGGGAGTTGTTTTGTGCAAAGCCTGAGTCTGTAAACGCACAGGTGGTGCGCGAATTTTATGCAAATATTGACAAGGAAGATGGTTTCCAAGTGATTGTTCGGGGAGTCGAAGTCGACTAG

Coding sequence (CDS)

ATGAAATGCGACCGCATTTCTGGAAAAACAGAGGTCGTTCCGAGTCGCACGTGGTCTCCAATGGCGAAAACTAGAGCAAGAAAAGAGAGGGAGAATGAGGAGGAAGAGGTGCCTGTTACCCCTGAGGTACAGAAAGTAAAAGCGAAGAAGAAGAAGACACCGGAGGAAAAAGAAGCCAAAAGAAGGAGAAGGCAACAACGGGCTGAGGAGCAAGAAGCTGTCCAGAAGGCGACAGAAGATGTTACTACTACAGTGGAAGAAGGAAATCCGAAAGAACTTGAAGTGCAGAACCCAGAGGAGGGTGAACCGATAGTGGCAGATACAGAAAGAGTTCAAGAAAAGAACACTGAGGAGATTCAAGAAAAACAGGCTGAGGAAGTGCAGGAACATCATGCAAAGGTTGCACTTGAAGAAGGTAATGAGCAAGAACAGGAGGCTCGAGTGGAGGTGATCATCTCGGAGGTACCCAAACGTCGCCGCATTAAGAGGAAAGCGGGCCGCATCAAGGTAGTCGGAACTGATACCCCCTCGCCTCCAACTACTGACTCTGAAAGAGAGAATGCAGAGAAAGAAGAGCGTGAGAAGAAGGAGGTCAAGGAAAAAGTAAGAGAAGAAGCAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAAAGTGTTGCTGAAGCATCGGAAGAACCTGATGAGATAGAAGAGCCACAGTTGCCGTATGATCGCTTCGTCAACAATTCTGCCAGAGCAAAATATGCTAAGCTGCTGAAAAGAGATTTCCTGTTTGAGAGAGGATTTAGCGGTGATCTTCCGCATTTTCTAAGGACCGGCATTGCAGACCACGGCTGGGAGTTGTTTTGTGCAAAGCCTGAGTCTGTAAACGCACAGGTGGTGCGCGAATTTTATGCAAATATTGACAAGGAAGATGGTTTCCAAGTGATTGTTCGGGGAGTCGAAGTCGACTAG

Protein sequence

MKCDRISGKTEVVPSRTWSPMAKTRARKERENEEEEVPVTPEVQKVKAKKKKTPEEKEAKRRRRQQRAEEQEAVQKATEDVTTTVEEGNPKELEVQNPEEGEPIVADTERVQEKNTEEIQEKQAEEVQEHHAKVALEEGNEQEQEARVEVIISEVPKRRRIKRKAGRIKVVGTDTPSPPTTDSERENAEKEEREKKEVKEKVREEAEKKAEEERLLKRRAEKGKSVAEASEEPDEIEEPQLPYDRFVNNSARAKYAKLLKRDFLFERGFSGDLPHFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGVEVD

Homology

The following BLAST results are available for this feature:

BLAST of Spg008604 vs.


Match Name	E-value	Identity	Description

BLAST of Spg008604 vs.


Match Name	E-value	Identity	Description

BLAST of Spg008604 vs.


Match Name	E-value	Identity	Description

BLAST of Spg008604 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 56..80
None	No IPR available	COILS	Coil	Coil	coord: 105..125
None	No IPR available	COILS	Coil	Coil	coord: 181..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008604.1	Spg008604.1	mRNA